BLASTX nr result

ID: Zingiber25_contig00027634 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00027634
         (673 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006484790.1| PREDICTED: probable ADP-ribosylation factor ...    65   2e-08
ref|XP_006484789.1| PREDICTED: probable ADP-ribosylation factor ...    65   2e-08
ref|XP_006484788.1| PREDICTED: probable ADP-ribosylation factor ...    65   2e-08
ref|XP_006484787.1| PREDICTED: probable ADP-ribosylation factor ...    65   2e-08
ref|XP_006437268.1| hypothetical protein CICLE_v10030836mg [Citr...    64   4e-08
gb|EOY10412.1| ARF GAP-like zinc finger-containing protein ZIGA4...    64   5e-08
ref|XP_003632552.1| PREDICTED: probable ADP-ribosylation factor ...    60   8e-07
emb|CBI31191.3| unnamed protein product [Vitis vinifera]               60   8e-07
ref|XP_006375928.1| hypothetical protein POPTR_0013s06460g [Popu...    59   1e-06
ref|XP_002319204.1| ARF GAP-like zinc finger-containing protein ...    59   1e-06
ref|XP_004489644.1| PREDICTED: probable ADP-ribosylation factor ...    58   2e-06
ref|XP_002530953.1| HIV-1 rev binding protein, hrbl, putative [R...    57   4e-06
gb|AFK41718.1| unknown [Medicago truncatula]                           56   9e-06

>ref|XP_006484790.1| PREDICTED: probable ADP-ribosylation factor GTPase-activating
           protein AGD14-like isoform X2 [Citrus sinensis]
          Length = 158

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 33/66 (50%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
 Frame = -3

Query: 671 LPDSLLHTDLLG-FPQTWFPQNPDASYALPVTQGSLKYNGGEVPSSQLRDITSQGPIASV 495
           LP+S L +  LG   Q+WFPQNP + +     QG L Y  G+ PS+QL +I +Q P+ASV
Sbjct: 93  LPNSELPSPFLGGATQSWFPQNPVSPFVQAAAQGGLAYMSGQSPSAQLANIPTQEPVASV 152

Query: 494 GRNPFA 477
           G NPFA
Sbjct: 153 GGNPFA 158


>ref|XP_006484789.1| PREDICTED: probable ADP-ribosylation factor GTPase-activating
           protein AGD14-like isoform X1 [Citrus sinensis]
          Length = 160

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 33/66 (50%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
 Frame = -3

Query: 671 LPDSLLHTDLLG-FPQTWFPQNPDASYALPVTQGSLKYNGGEVPSSQLRDITSQGPIASV 495
           LP+S L +  LG   Q+WFPQNP + +     QG L Y  G+ PS+QL +I +Q P+ASV
Sbjct: 95  LPNSELPSPFLGGATQSWFPQNPVSPFVQAAAQGGLAYMSGQSPSAQLANIPTQEPVASV 154

Query: 494 GRNPFA 477
           G NPFA
Sbjct: 155 GGNPFA 160


>ref|XP_006484788.1| PREDICTED: probable ADP-ribosylation factor GTPase-activating
           protein AGD14-like isoform X2 [Citrus sinensis]
          Length = 713

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 33/66 (50%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
 Frame = -3

Query: 671 LPDSLLHTDLLG-FPQTWFPQNPDASYALPVTQGSLKYNGGEVPSSQLRDITSQGPIASV 495
           LP+S L +  LG   Q+WFPQNP + +     QG L Y  G+ PS+QL +I +Q P+ASV
Sbjct: 648 LPNSELPSPFLGGATQSWFPQNPVSPFVQAAAQGGLAYMSGQSPSAQLANIPTQEPVASV 707

Query: 494 GRNPFA 477
           G NPFA
Sbjct: 708 GGNPFA 713


>ref|XP_006484787.1| PREDICTED: probable ADP-ribosylation factor GTPase-activating
           protein AGD14-like isoform X1 [Citrus sinensis]
          Length = 715

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 33/66 (50%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
 Frame = -3

Query: 671 LPDSLLHTDLLG-FPQTWFPQNPDASYALPVTQGSLKYNGGEVPSSQLRDITSQGPIASV 495
           LP+S L +  LG   Q+WFPQNP + +     QG L Y  G+ PS+QL +I +Q P+ASV
Sbjct: 650 LPNSELPSPFLGGATQSWFPQNPVSPFVQAAAQGGLAYMSGQSPSAQLANIPTQEPVASV 709

Query: 494 GRNPFA 477
           G NPFA
Sbjct: 710 GGNPFA 715


>ref|XP_006437268.1| hypothetical protein CICLE_v10030836mg [Citrus clementina]
           gi|557539464|gb|ESR50508.1| hypothetical protein
           CICLE_v10030836mg [Citrus clementina]
          Length = 714

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 32/66 (48%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
 Frame = -3

Query: 671 LPDSLLHTDLLG-FPQTWFPQNPDASYALPVTQGSLKYNGGEVPSSQLRDITSQGPIASV 495
           LP++ L +  LG   Q+WFPQNP + +     QG L Y  G+ PS+QL +I +Q P+ASV
Sbjct: 649 LPNAELPSPFLGGATQSWFPQNPVSPFVQAAAQGGLAYMSGQSPSAQLANIPTQEPVASV 708

Query: 494 GRNPFA 477
           G NPFA
Sbjct: 709 GGNPFA 714


>gb|EOY10412.1| ARF GAP-like zinc finger-containing protein ZIGA4, putative isoform
           3 [Theobroma cacao]
          Length = 654

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 32/66 (48%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
 Frame = -3

Query: 671 LPDSLLHTDLLG-FPQTWFPQNPDASYALPVTQGSLKYNGGEVPSSQLRDITSQGPIASV 495
           LP++ L +  LG   Q WFPQNP         QG L Y  G+ PSSQL ++ +QGP+AS+
Sbjct: 589 LPNAQLPSAYLGGVSQPWFPQNPVTPCIPGTPQGGLAYMSGQAPSSQLSNVPAQGPVASI 648

Query: 494 GRNPFA 477
           G NPFA
Sbjct: 649 GGNPFA 654


>ref|XP_003632552.1| PREDICTED: probable ADP-ribosylation factor GTPase-activating
           protein AGD14-like [Vitis vinifera]
          Length = 677

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 28/54 (51%), Positives = 32/54 (59%)
 Frame = -3

Query: 638 GFPQTWFPQNPDASYALPVTQGSLKYNGGEVPSSQLRDITSQGPIASVGRNPFA 477
           G  Q WFPQ P   Y     QG L Y  G  PSSQL +  +QGP+AS+G NPFA
Sbjct: 624 GVTQPWFPQKPVTPYIPAAPQGGLAYVAGSTPSSQLPNGQTQGPVASIGGNPFA 677


>emb|CBI31191.3| unnamed protein product [Vitis vinifera]
          Length = 695

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 28/54 (51%), Positives = 32/54 (59%)
 Frame = -3

Query: 638 GFPQTWFPQNPDASYALPVTQGSLKYNGGEVPSSQLRDITSQGPIASVGRNPFA 477
           G  Q WFPQ P   Y     QG L Y  G  PSSQL +  +QGP+AS+G NPFA
Sbjct: 642 GVTQPWFPQKPVTPYIPAAPQGGLAYVAGSTPSSQLPNGQTQGPVASIGGNPFA 695


>ref|XP_006375928.1| hypothetical protein POPTR_0013s06460g [Populus trichocarpa]
           gi|550325104|gb|ERP53725.1| hypothetical protein
           POPTR_0013s06460g [Populus trichocarpa]
          Length = 677

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 27/54 (50%), Positives = 34/54 (62%)
 Frame = -3

Query: 638 GFPQTWFPQNPDASYALPVTQGSLKYNGGEVPSSQLRDITSQGPIASVGRNPFA 477
           G  Q WFPQ+   +Y     QG L Y  G+ PS QL ++ +QGP+ASVG NPFA
Sbjct: 624 GVTQPWFPQDLAMTYIPAAPQGGLAYMAGQAPSPQLGNVQTQGPVASVGGNPFA 677


>ref|XP_002319204.1| ARF GAP-like zinc finger-containing protein ZiGA4 [Populus
           trichocarpa] gi|222857580|gb|EEE95127.1| ARF GAP-like
           zinc finger-containing protein ZiGA4 [Populus
           trichocarpa]
          Length = 672

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 27/54 (50%), Positives = 34/54 (62%)
 Frame = -3

Query: 638 GFPQTWFPQNPDASYALPVTQGSLKYNGGEVPSSQLRDITSQGPIASVGRNPFA 477
           G  Q WFPQ+   +Y     QG L Y  G+ PS QL ++ +QGP+ASVG NPFA
Sbjct: 619 GVTQPWFPQDLAMTYIPAAPQGGLAYMAGQAPSPQLGNVQTQGPVASVGGNPFA 672


>ref|XP_004489644.1| PREDICTED: probable ADP-ribosylation factor GTPase-activating
           protein AGD14-like [Cicer arietinum]
          Length = 674

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 28/65 (43%), Positives = 37/65 (56%)
 Frame = -3

Query: 671 LPDSLLHTDLLGFPQTWFPQNPDASYALPVTQGSLKYNGGEVPSSQLRDITSQGPIASVG 492
           LPD+LL     G  + W PQN    Y     +G L +   + PSSQL++I +Q P+AS G
Sbjct: 610 LPDALLPATFGGISEPWLPQNTVTPYISSAGEGGLSFMAVQTPSSQLQNIQAQEPVASFG 669

Query: 491 RNPFA 477
            NPFA
Sbjct: 670 GNPFA 674


>ref|XP_002530953.1| HIV-1 rev binding protein, hrbl, putative [Ricinus communis]
           gi|223529468|gb|EEF31425.1| HIV-1 rev binding protein,
           hrbl, putative [Ricinus communis]
          Length = 692

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 30/67 (44%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
 Frame = -3

Query: 671 LPDSLLHTDLLGFPQT--WFPQNPDASYALPVTQGSLKYNGGEVPSSQLRDITSQGPIAS 498
           LPD+ L +  LG   T  WFPQ+P  +Y     QG L Y GG+ P+    ++ +QGP+A 
Sbjct: 629 LPDAHLQSAFLGSGMTEPWFPQDPVTTYVPAAPQGGLAYMGGQAPNP---NVQTQGPVAF 685

Query: 497 VGRNPFA 477
           VG NPFA
Sbjct: 686 VGGNPFA 692


>gb|AFK41718.1| unknown [Medicago truncatula]
          Length = 75

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 28/65 (43%), Positives = 37/65 (56%)
 Frame = -3

Query: 671 LPDSLLHTDLLGFPQTWFPQNPDASYALPVTQGSLKYNGGEVPSSQLRDITSQGPIASVG 492
           LPD+LL     G P+ W PQN    Y +   +G   +     PSSQL++I +Q P+AS G
Sbjct: 12  LPDALLPATFGGIPEPWLPQNTVTPY-ISSAEGGFSFMAVHTPSSQLQNIQAQEPVASFG 70

Query: 491 RNPFA 477
            NPFA
Sbjct: 71  GNPFA 75


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