BLASTX nr result
ID: Zingiber25_contig00027604
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00027604
(740 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI27412.3| unnamed protein product [Vitis vinifera] 434 e-119
ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 434 e-119
gb|EOY01555.1| DNA-directed RNA polymerase isoform 3 [Theobroma ... 428 e-118
gb|EOY01553.1| DNA-directed RNA polymerase isoform 1 [Theobroma ... 428 e-118
ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 427 e-117
ref|XP_006338320.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 426 e-117
ref|XP_006599175.1| PREDICTED: DNA-directed RNA polymerase 1B, m... 426 e-117
emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris] 425 e-117
dbj|BAB69063.1| T7 bacteriophage-type single subunit RNA polymer... 425 e-117
gb|EMS47556.1| DNA-directed RNA polymerase 2, chloroplastic/mito... 425 e-117
gb|AAF32492.1|AF091838_1 single-subunit RNA polymerase G [Tritic... 425 e-117
sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymeras... 425 e-117
sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymeras... 425 e-117
emb|CAE52834.1| RNA polymerase [Hordeum vulgare] 425 e-117
emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum] 425 e-117
emb|CAC95022.1| mitochondrial RNA polymerase [Nicotiana tabacum] 425 e-117
gb|EOY03847.1| DNA/RNA polymerases superfamily protein [Theobrom... 424 e-116
ref|XP_002311418.2| hypothetical protein POPTR_0008s11200g [Popu... 424 e-116
ref|XP_002315996.2| DNA-directed RNA polymerase family protein [... 423 e-116
ref|XP_002533595.1| DNA-directed RNA polymerase 2B, chloroplast/... 423 e-116
>emb|CBI27412.3| unnamed protein product [Vitis vinifera]
Length = 810
Score = 434 bits (1115), Expect = e-119
Identities = 209/246 (84%), Positives = 226/246 (91%)
Frame = -1
Query: 740 YYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRALGKSGLRWLKIHLANLYGGGVN 561
+YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGR LGKSGLRWLKIHLAN+Y GGV+
Sbjct: 383 FYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVYAGGVD 442
Query: 560 KLSYDGRIAFTESHLEDIFDSADRPLEGGRWWLDAEDPFQCLSVCINLAEALRSSSPETT 381
KLSY+GR+AFTE+HLEDIFDSADRPLEG RWWL AEDPFQCL+ CINL+EALRSSSPETT
Sbjct: 443 KLSYEGRVAFTENHLEDIFDSADRPLEGRRWWLSAEDPFQCLATCINLSEALRSSSPETT 502
Query: 380 ISHIPVHQDGSCNGLQHYAALGRDKFGAAAVNLVDGDKPADVYSGIAAGVQKIMQRDAQQ 201
ISH+PVHQDGSCNGLQHYAALGRDK GAAAVNLV G+KPADVYSGIAA V IMQRDAQ+
Sbjct: 503 ISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMQRDAQK 562
Query: 200 DPAENPNALLARVLVGQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKDRGVFADQRELS 21
DPA PNAL AR+L+ QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK+R AD+ E+
Sbjct: 563 DPATEPNALRARLLISQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIADEGEVF 622
Query: 20 SAASYA 3
SA+ YA
Sbjct: 623 SASCYA 628
>ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis
vinifera]
Length = 978
Score = 434 bits (1115), Expect = e-119
Identities = 209/246 (84%), Positives = 226/246 (91%)
Frame = -1
Query: 740 YYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRALGKSGLRWLKIHLANLYGGGVN 561
+YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGR LGKSGLRWLKIHLAN+Y GGV+
Sbjct: 551 FYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVYAGGVD 610
Query: 560 KLSYDGRIAFTESHLEDIFDSADRPLEGGRWWLDAEDPFQCLSVCINLAEALRSSSPETT 381
KLSY+GR+AFTE+HLEDIFDSADRPLEG RWWL AEDPFQCL+ CINL+EALRSSSPETT
Sbjct: 611 KLSYEGRVAFTENHLEDIFDSADRPLEGRRWWLSAEDPFQCLATCINLSEALRSSSPETT 670
Query: 380 ISHIPVHQDGSCNGLQHYAALGRDKFGAAAVNLVDGDKPADVYSGIAAGVQKIMQRDAQQ 201
ISH+PVHQDGSCNGLQHYAALGRDK GAAAVNLV G+KPADVYSGIAA V IMQRDAQ+
Sbjct: 671 ISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMQRDAQK 730
Query: 200 DPAENPNALLARVLVGQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKDRGVFADQRELS 21
DPA PNAL AR+L+ QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK+R AD+ E+
Sbjct: 731 DPATEPNALRARLLISQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIADEGEVF 790
Query: 20 SAASYA 3
SA+ YA
Sbjct: 791 SASCYA 796
>gb|EOY01555.1| DNA-directed RNA polymerase isoform 3 [Theobroma cacao]
Length = 932
Score = 428 bits (1101), Expect = e-118
Identities = 206/246 (83%), Positives = 225/246 (91%)
Frame = -1
Query: 740 YYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRALGKSGLRWLKIHLANLYGGGVN 561
YYPHNLDFRGRAYPMHPYLNHLGSDLCRG+LEFAEGR LGKSGLRWLKIHLANLY GGV+
Sbjct: 569 YYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVD 628
Query: 560 KLSYDGRIAFTESHLEDIFDSADRPLEGGRWWLDAEDPFQCLSVCINLAEALRSSSPETT 381
KLSY+GRIAFTE+HL+DIFDSADRPLEG RWWL AEDPFQCL+ CINL+EALRSSSPETT
Sbjct: 629 KLSYEGRIAFTENHLDDIFDSADRPLEGRRWWLSAEDPFQCLAACINLSEALRSSSPETT 688
Query: 380 ISHIPVHQDGSCNGLQHYAALGRDKFGAAAVNLVDGDKPADVYSGIAAGVQKIMQRDAQQ 201
ISH+PVHQDGSCNGLQHYAALGRDK GAA+VNLV G+KPADVYSGIAA V IM+RDA++
Sbjct: 689 ISHMPVHQDGSCNGLQHYAALGRDKLGAASVNLVAGEKPADVYSGIAARVVDIMRRDAEK 748
Query: 200 DPAENPNALLARVLVGQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKDRGVFADQRELS 21
DPA NP+AL AR+L+ QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK+R AD E+
Sbjct: 749 DPAINPHALHARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIADDTEMF 808
Query: 20 SAASYA 3
A+ YA
Sbjct: 809 VASCYA 814
>gb|EOY01553.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
gi|508709657|gb|EOY01554.1| DNA-directed RNA polymerase
isoform 1 [Theobroma cacao]
Length = 996
Score = 428 bits (1101), Expect = e-118
Identities = 206/246 (83%), Positives = 225/246 (91%)
Frame = -1
Query: 740 YYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRALGKSGLRWLKIHLANLYGGGVN 561
YYPHNLDFRGRAYPMHPYLNHLGSDLCRG+LEFAEGR LGKSGLRWLKIHLANLY GGV+
Sbjct: 569 YYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVD 628
Query: 560 KLSYDGRIAFTESHLEDIFDSADRPLEGGRWWLDAEDPFQCLSVCINLAEALRSSSPETT 381
KLSY+GRIAFTE+HL+DIFDSADRPLEG RWWL AEDPFQCL+ CINL+EALRSSSPETT
Sbjct: 629 KLSYEGRIAFTENHLDDIFDSADRPLEGRRWWLSAEDPFQCLAACINLSEALRSSSPETT 688
Query: 380 ISHIPVHQDGSCNGLQHYAALGRDKFGAAAVNLVDGDKPADVYSGIAAGVQKIMQRDAQQ 201
ISH+PVHQDGSCNGLQHYAALGRDK GAA+VNLV G+KPADVYSGIAA V IM+RDA++
Sbjct: 689 ISHMPVHQDGSCNGLQHYAALGRDKLGAASVNLVAGEKPADVYSGIAARVVDIMRRDAEK 748
Query: 200 DPAENPNALLARVLVGQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKDRGVFADQRELS 21
DPA NP+AL AR+L+ QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK+R AD E+
Sbjct: 749 DPAINPHALHARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIADDTEMF 808
Query: 20 SAASYA 3
A+ YA
Sbjct: 809 VASCYA 814
>ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like [Solanum
tuberosum]
Length = 993
Score = 427 bits (1098), Expect = e-117
Identities = 203/246 (82%), Positives = 223/246 (90%)
Frame = -1
Query: 740 YYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRALGKSGLRWLKIHLANLYGGGVN 561
YYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEF+EGR LGKSGLRWLKIHLAN+YGGGV+
Sbjct: 566 YYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFSEGRPLGKSGLRWLKIHLANVYGGGVD 625
Query: 560 KLSYDGRIAFTESHLEDIFDSADRPLEGGRWWLDAEDPFQCLSVCINLAEALRSSSPETT 381
KLSY+GR AF+E+H+EDIFDSADRPLEG RWWL AEDPFQCL+ CIN++EALRS SPET+
Sbjct: 626 KLSYEGRAAFSENHVEDIFDSADRPLEGRRWWLGAEDPFQCLATCINISEALRSPSPETS 685
Query: 380 ISHIPVHQDGSCNGLQHYAALGRDKFGAAAVNLVDGDKPADVYSGIAAGVQKIMQRDAQQ 201
ISH+P+HQDGSCNGLQHYAALGRDK GAAAVNLV GDKPADVYSGIAA V IM+RDA +
Sbjct: 686 ISHMPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDADK 745
Query: 200 DPAENPNALLARVLVGQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKDRGVFADQRELS 21
DPA +PN + AR+L+ QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK+RG D EL
Sbjct: 746 DPATDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIEDDNELF 805
Query: 20 SAASYA 3
SAA YA
Sbjct: 806 SAACYA 811
>ref|XP_006338320.1| PREDICTED: DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial-like [Solanum tuberosum]
Length = 1019
Score = 426 bits (1096), Expect = e-117
Identities = 206/246 (83%), Positives = 225/246 (91%)
Frame = -1
Query: 740 YYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRALGKSGLRWLKIHLANLYGGGVN 561
+YPHN+DFRGRAYPMHP+LNHLGSD+CRG+LEFA GR LG+SGLRWLKIHLANL+ GGV+
Sbjct: 592 FYPHNVDFRGRAYPMHPHLNHLGSDICRGVLEFAAGRPLGESGLRWLKIHLANLFAGGVD 651
Query: 560 KLSYDGRIAFTESHLEDIFDSADRPLEGGRWWLDAEDPFQCLSVCINLAEALRSSSPETT 381
KLS DGRIAFTESHL+DIFDSAD+PLEG RWWL+AEDPFQCL+VCINL+EA+RSSSPET
Sbjct: 652 KLSLDGRIAFTESHLDDIFDSADKPLEGRRWWLNAEDPFQCLAVCINLSEAVRSSSPETV 711
Query: 380 ISHIPVHQDGSCNGLQHYAALGRDKFGAAAVNLVDGDKPADVYSGIAAGVQKIMQRDAQQ 201
ISHIPVHQDGSCNGLQHYAALGRDK GAAAVNLV G+KPADVYSGIAA V IM RDAQ+
Sbjct: 712 ISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMNRDAQR 771
Query: 200 DPAENPNALLARVLVGQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKDRGVFADQRELS 21
DPAE P+A+ ARVLV QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK+RG AD EL
Sbjct: 772 DPAEFPDAVRARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELF 831
Query: 20 SAASYA 3
AASYA
Sbjct: 832 GAASYA 837
>ref|XP_006599175.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like
[Glycine max]
Length = 957
Score = 426 bits (1094), Expect = e-117
Identities = 205/246 (83%), Positives = 223/246 (90%)
Frame = -1
Query: 740 YYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRALGKSGLRWLKIHLANLYGGGVN 561
YYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGR+LGKSGLRWLKIHLANLY GGV+
Sbjct: 530 YYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRSLGKSGLRWLKIHLANLYAGGVD 589
Query: 560 KLSYDGRIAFTESHLEDIFDSADRPLEGGRWWLDAEDPFQCLSVCINLAEALRSSSPETT 381
KLSYDGRI+FTE+HL+DIFDSADRPLEG WWL AEDPFQCL+ CINL+EALRS +PETT
Sbjct: 590 KLSYDGRISFTENHLDDIFDSADRPLEGKHWWLQAEDPFQCLAACINLSEALRSPTPETT 649
Query: 380 ISHIPVHQDGSCNGLQHYAALGRDKFGAAAVNLVDGDKPADVYSGIAAGVQKIMQRDAQQ 201
ISH+PVHQDGSCNGLQHYAALGRDK GAAAVNLV GD+PADVYSGIAA V +IM+RDA++
Sbjct: 650 ISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVGGDQPADVYSGIAARVLEIMKRDAEK 709
Query: 200 DPAENPNALLARVLVGQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKDRGVFADQRELS 21
DP NPNAL AR L+ QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK+R D EL
Sbjct: 710 DPRTNPNALHARRLISQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDDVELF 769
Query: 20 SAASYA 3
+A+ YA
Sbjct: 770 AASCYA 775
>emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris]
Length = 1002
Score = 425 bits (1092), Expect = e-117
Identities = 202/246 (82%), Positives = 223/246 (90%)
Frame = -1
Query: 740 YYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRALGKSGLRWLKIHLANLYGGGVN 561
YYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGR LGKSGLRWLKIHLAN+YGGGV+
Sbjct: 575 YYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVYGGGVD 634
Query: 560 KLSYDGRIAFTESHLEDIFDSADRPLEGGRWWLDAEDPFQCLSVCINLAEALRSSSPETT 381
KLSY+GR+AF+E+H+EDIFDSA+RPLEG RWWL AEDPFQCL+ CIN+AEALRS SPET
Sbjct: 635 KLSYEGRVAFSENHVEDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETA 694
Query: 380 ISHIPVHQDGSCNGLQHYAALGRDKFGAAAVNLVDGDKPADVYSGIAAGVQKIMQRDAQQ 201
IS++P+HQDGSCNGLQHYAALGRD GAAAVNLV GDKPADVYSGIAA V IM+RDA +
Sbjct: 695 ISYMPIHQDGSCNGLQHYAALGRDTLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAK 754
Query: 200 DPAENPNALLARVLVGQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKDRGVFADQRELS 21
DPA +PN + AR+L+ QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK+RGV D EL
Sbjct: 755 DPANDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGVIEDDNELF 814
Query: 20 SAASYA 3
+AA YA
Sbjct: 815 AAACYA 820
>dbj|BAB69063.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
sylvestris]
Length = 1002
Score = 425 bits (1092), Expect = e-117
Identities = 202/246 (82%), Positives = 223/246 (90%)
Frame = -1
Query: 740 YYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRALGKSGLRWLKIHLANLYGGGVN 561
YYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGR LGKSGLRWLKIHLAN+YGGGV+
Sbjct: 575 YYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVYGGGVD 634
Query: 560 KLSYDGRIAFTESHLEDIFDSADRPLEGGRWWLDAEDPFQCLSVCINLAEALRSSSPETT 381
KLSY+GR+AF+E+H+EDIFDSA+RPLEG RWWL AEDPFQCL+ CIN+AEALRS SPET
Sbjct: 635 KLSYEGRVAFSENHVEDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETA 694
Query: 380 ISHIPVHQDGSCNGLQHYAALGRDKFGAAAVNLVDGDKPADVYSGIAAGVQKIMQRDAQQ 201
IS++P+HQDGSCNGLQHYAALGRD GAAAVNLV GDKPADVYSGIAA V IM+RDA +
Sbjct: 695 ISYMPIHQDGSCNGLQHYAALGRDTLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAK 754
Query: 200 DPAENPNALLARVLVGQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKDRGVFADQRELS 21
DPA +PN + AR+L+ QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK+RGV D EL
Sbjct: 755 DPANDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGVIEDDNELF 814
Query: 20 SAASYA 3
+AA YA
Sbjct: 815 AAACYA 820
>gb|EMS47556.1| DNA-directed RNA polymerase 2, chloroplastic/mitochondrial [Triticum
urartu]
Length = 854
Score = 425 bits (1092), Expect = e-117
Identities = 203/246 (82%), Positives = 226/246 (91%)
Frame = -1
Query: 740 YYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRALGKSGLRWLKIHLANLYGGGVN 561
YYPHNLDFRGRAYPMHPYLNHLGSDLCRG+LEF+EGR LG+SGLRWLKIHLANLYGGGV+
Sbjct: 395 YYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFSEGRPLGESGLRWLKIHLANLYGGGVD 454
Query: 560 KLSYDGRIAFTESHLEDIFDSADRPLEGGRWWLDAEDPFQCLSVCINLAEALRSSSPETT 381
KLSYDGRIAFTE+HL+DIFDSA+RPLEG RWWL+AEDPFQCL+VC++L EALRS SPET
Sbjct: 455 KLSYDGRIAFTENHLDDIFDSANRPLEGKRWWLEAEDPFQCLAVCMDLNEALRSPSPETV 514
Query: 380 ISHIPVHQDGSCNGLQHYAALGRDKFGAAAVNLVDGDKPADVYSGIAAGVQKIMQRDAQQ 201
ISHIPVHQDGSCNGLQHYAALGRDK GA AVNLV G+KPADVYSGIAA V +IM+RDAQ+
Sbjct: 515 ISHIPVHQDGSCNGLQHYAALGRDKLGAVAVNLVSGEKPADVYSGIAARVVEIMKRDAQK 574
Query: 200 DPAENPNALLARVLVGQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKDRGVFADQRELS 21
DPA++ +A AR+LV QVDRKLVKQTVMTSVYGVTY+GAR+QIKRRLK+RGV AD EL
Sbjct: 575 DPAKDADAARARLLVDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERGVIADDSELF 634
Query: 20 SAASYA 3
A+ YA
Sbjct: 635 GASCYA 640
>gb|AAF32492.1|AF091838_1 single-subunit RNA polymerase G [Triticum aestivum]
Length = 1005
Score = 425 bits (1092), Expect = e-117
Identities = 203/246 (82%), Positives = 226/246 (91%)
Frame = -1
Query: 740 YYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRALGKSGLRWLKIHLANLYGGGVN 561
YYPHNLDFRGRAYPMHPYLNHLGSDLCRG+LEF+EGR LG+SGLRWLKIHLANLYGGGV+
Sbjct: 578 YYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFSEGRPLGESGLRWLKIHLANLYGGGVD 637
Query: 560 KLSYDGRIAFTESHLEDIFDSADRPLEGGRWWLDAEDPFQCLSVCINLAEALRSSSPETT 381
KLSYDGRIAFTE+HL+DIFDSA+RPLEG RWWL+AEDPFQCL+VC++L EALRS SPET
Sbjct: 638 KLSYDGRIAFTENHLDDIFDSANRPLEGKRWWLEAEDPFQCLAVCMDLNEALRSPSPETV 697
Query: 380 ISHIPVHQDGSCNGLQHYAALGRDKFGAAAVNLVDGDKPADVYSGIAAGVQKIMQRDAQQ 201
ISHIPVHQDGSCNGLQHYAALGRDK GA AVNLV G+KPADVYSGIAA V +IM+RDAQ+
Sbjct: 698 ISHIPVHQDGSCNGLQHYAALGRDKLGAVAVNLVSGEKPADVYSGIAARVVEIMKRDAQK 757
Query: 200 DPAENPNALLARVLVGQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKDRGVFADQRELS 21
DPA++ +A AR+LV QVDRKLVKQTVMTSVYGVTY+GAR+QIKRRLK+RGV AD EL
Sbjct: 758 DPAKDADAARARLLVDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERGVIADDSELF 817
Query: 20 SAASYA 3
A+ YA
Sbjct: 818 GASCYA 823
>sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymerase 1B, mitochondrial; AltName:
Full=NictaRpoT1-tom; AltName: Full=T7 bacteriophage-type
single subunit RNA polymerase 1B; Flags: Precursor
Length = 1002
Score = 425 bits (1092), Expect = e-117
Identities = 202/246 (82%), Positives = 223/246 (90%)
Frame = -1
Query: 740 YYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRALGKSGLRWLKIHLANLYGGGVN 561
YYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGR LG SGLRWLKIHLAN+YGGGV+
Sbjct: 575 YYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGTSGLRWLKIHLANVYGGGVD 634
Query: 560 KLSYDGRIAFTESHLEDIFDSADRPLEGGRWWLDAEDPFQCLSVCINLAEALRSSSPETT 381
KLSY+GR+AF+E+HLEDIFDSA+RPLEG RWWL AEDPFQCL+ CIN+AEALRS SPET
Sbjct: 635 KLSYEGRVAFSENHLEDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETA 694
Query: 380 ISHIPVHQDGSCNGLQHYAALGRDKFGAAAVNLVDGDKPADVYSGIAAGVQKIMQRDAQQ 201
IS++P+HQDGSCNGLQHYAALGRDK GAAAVNLV GDKPADVYSGIAA V IM+RDA +
Sbjct: 695 ISYMPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAK 754
Query: 200 DPAENPNALLARVLVGQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKDRGVFADQRELS 21
DPA +PN + AR+L+ QVDRKLVKQTVMTSVYGVTYIGARDQIK+RLK+RGV D EL
Sbjct: 755 DPANDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKERGVIEDDNELF 814
Query: 20 SAASYA 3
+AA YA
Sbjct: 815 AAACYA 820
>sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymerase 1, mitochondrial; AltName:
Full=NsRpoT-A; AltName: Full=T7 bacteriophage-type single
subunit RNA polymerase 1; Flags: Precursor
gi|15824083|dbj|BAB69431.1| T7 bacteriophage-type single
subunit RNA polymerase [Nicotiana sylvestris]
Length = 1002
Score = 425 bits (1092), Expect = e-117
Identities = 202/246 (82%), Positives = 223/246 (90%)
Frame = -1
Query: 740 YYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRALGKSGLRWLKIHLANLYGGGVN 561
YYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGR LGKSGLRWLKIHLAN+YGGGV+
Sbjct: 575 YYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVYGGGVD 634
Query: 560 KLSYDGRIAFTESHLEDIFDSADRPLEGGRWWLDAEDPFQCLSVCINLAEALRSSSPETT 381
KLSY+GR+AF+E+H+EDIFDSA+RPLEG RWWL AEDPFQCL+ CIN+AEALRS SPET
Sbjct: 635 KLSYEGRVAFSENHVEDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETA 694
Query: 380 ISHIPVHQDGSCNGLQHYAALGRDKFGAAAVNLVDGDKPADVYSGIAAGVQKIMQRDAQQ 201
IS++P+HQDGSCNGLQHYAALGRD GAAAVNLV GDKPADVYSGIAA V IM+RDA +
Sbjct: 695 ISYMPIHQDGSCNGLQHYAALGRDTLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAK 754
Query: 200 DPAENPNALLARVLVGQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKDRGVFADQRELS 21
DPA +PN + AR+L+ QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK+RGV D EL
Sbjct: 755 DPANDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGVIEDDNELF 814
Query: 20 SAASYA 3
+AA YA
Sbjct: 815 AAACYA 820
>emb|CAE52834.1| RNA polymerase [Hordeum vulgare]
Length = 862
Score = 425 bits (1092), Expect = e-117
Identities = 203/246 (82%), Positives = 227/246 (92%)
Frame = -1
Query: 740 YYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRALGKSGLRWLKIHLANLYGGGVN 561
Y+PHNLDFRGRAYPMHPYLNHLGSDLCRG+LEF+EGR LG+SGLRWLKIHLANLYGGGV+
Sbjct: 435 YHPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFSEGRPLGESGLRWLKIHLANLYGGGVD 494
Query: 560 KLSYDGRIAFTESHLEDIFDSADRPLEGGRWWLDAEDPFQCLSVCINLAEALRSSSPETT 381
KLSYDGRIAFTE+HLEDIFDSA+RPLEG RWWL+AEDPFQCL+VC++L EALRSSSPET
Sbjct: 495 KLSYDGRIAFTENHLEDIFDSANRPLEGKRWWLEAEDPFQCLAVCMDLNEALRSSSPETV 554
Query: 380 ISHIPVHQDGSCNGLQHYAALGRDKFGAAAVNLVDGDKPADVYSGIAAGVQKIMQRDAQQ 201
ISHIPVHQDGSCNGLQHYAALGRDK GA AVNLV G+KPADVYSGIAA V +IM+RDAQ+
Sbjct: 555 ISHIPVHQDGSCNGLQHYAALGRDKLGAVAVNLVSGEKPADVYSGIAARVVEIMKRDAQK 614
Query: 200 DPAENPNALLARVLVGQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKDRGVFADQRELS 21
DPA++ +A AR+LV QVDR+LVKQTVMTSVYGVTY+GAR+QIKRRLK+RGV AD EL
Sbjct: 615 DPAKDADAARARLLVDQVDRRLVKQTVMTSVYGVTYVGAREQIKRRLKERGVIADDSELF 674
Query: 20 SAASYA 3
A+ YA
Sbjct: 675 GASCYA 680
>emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum]
Length = 1002
Score = 425 bits (1092), Expect = e-117
Identities = 202/246 (82%), Positives = 223/246 (90%)
Frame = -1
Query: 740 YYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRALGKSGLRWLKIHLANLYGGGVN 561
YYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGR LG SGLRWLKIHLAN+YGGGV+
Sbjct: 575 YYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGTSGLRWLKIHLANVYGGGVD 634
Query: 560 KLSYDGRIAFTESHLEDIFDSADRPLEGGRWWLDAEDPFQCLSVCINLAEALRSSSPETT 381
KLSY+GR+AF+E+HLEDIFDSA+RPLEG RWWL AEDPFQCL+ CIN+AEALRS SPET
Sbjct: 635 KLSYEGRVAFSENHLEDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETA 694
Query: 380 ISHIPVHQDGSCNGLQHYAALGRDKFGAAAVNLVDGDKPADVYSGIAAGVQKIMQRDAQQ 201
IS++P+HQDGSCNGLQHYAALGRDK GAAAVNLV GDKPADVYSGIAA V IM+RDA +
Sbjct: 695 ISYMPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAK 754
Query: 200 DPAENPNALLARVLVGQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKDRGVFADQRELS 21
DPA +PN + AR+L+ QVDRKLVKQTVMTSVYGVTYIGARDQIK+RLK+RGV D EL
Sbjct: 755 DPANDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKERGVIEDDNELF 814
Query: 20 SAASYA 3
+AA YA
Sbjct: 815 AAACYA 820
>emb|CAC95022.1| mitochondrial RNA polymerase [Nicotiana tabacum]
Length = 715
Score = 425 bits (1092), Expect = e-117
Identities = 202/246 (82%), Positives = 223/246 (90%)
Frame = -1
Query: 740 YYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRALGKSGLRWLKIHLANLYGGGVN 561
YYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGR LG SGLRWLKIHLAN+YGGGV+
Sbjct: 288 YYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGTSGLRWLKIHLANVYGGGVD 347
Query: 560 KLSYDGRIAFTESHLEDIFDSADRPLEGGRWWLDAEDPFQCLSVCINLAEALRSSSPETT 381
KLSY+GR+AF+E+HLEDIFDSA+RPLEG RWWL AEDPFQCL+ CIN+AEALRS SPET
Sbjct: 348 KLSYEGRVAFSENHLEDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETA 407
Query: 380 ISHIPVHQDGSCNGLQHYAALGRDKFGAAAVNLVDGDKPADVYSGIAAGVQKIMQRDAQQ 201
IS++P+HQDGSCNGLQHYAALGRDK GAAAVNLV GDKPADVYSGIAA V IM+RDA +
Sbjct: 408 ISYMPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAK 467
Query: 200 DPAENPNALLARVLVGQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKDRGVFADQRELS 21
DPA +PN + AR+L+ QVDRKLVKQTVMTSVYGVTYIGARDQIK+RLK+RGV D EL
Sbjct: 468 DPANDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKERGVIEDDNELF 527
Query: 20 SAASYA 3
+AA YA
Sbjct: 528 AAACYA 533
>gb|EOY03847.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 1100
Score = 424 bits (1090), Expect = e-116
Identities = 205/246 (83%), Positives = 223/246 (90%)
Frame = -1
Query: 740 YYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRALGKSGLRWLKIHLANLYGGGVN 561
YYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEF EGR LGKSGLRWLKIHLANLY GGV+
Sbjct: 609 YYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLRWLKIHLANLYAGGVD 668
Query: 560 KLSYDGRIAFTESHLEDIFDSADRPLEGGRWWLDAEDPFQCLSVCINLAEALRSSSPETT 381
KLS+ GR+AF E+HL+DIFDSADRPLEG RWWL AEDPFQCL+VCINLAEALRSSSPET
Sbjct: 669 KLSHGGRLAFAENHLDDIFDSADRPLEGKRWWLKAEDPFQCLAVCINLAEALRSSSPETF 728
Query: 380 ISHIPVHQDGSCNGLQHYAALGRDKFGAAAVNLVDGDKPADVYSGIAAGVQKIMQRDAQQ 201
+SHIPVHQDGSCNGLQHYAALGRDK GAA+VNLV G+KPADVYSGIAA V I++RDAQ+
Sbjct: 729 VSHIPVHQDGSCNGLQHYAALGRDKLGAASVNLVAGEKPADVYSGIAARVLDIIRRDAQK 788
Query: 200 DPAENPNALLARVLVGQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKDRGVFADQRELS 21
DPA P+AL A+VLV QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK+RGV D +E+
Sbjct: 789 DPAVFPDALHAKVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGVITDDKEIF 848
Query: 20 SAASYA 3
A+ YA
Sbjct: 849 GASCYA 854
>ref|XP_002311418.2| hypothetical protein POPTR_0008s11200g [Populus trichocarpa]
gi|550332836|gb|EEE88785.2| hypothetical protein
POPTR_0008s11200g [Populus trichocarpa]
Length = 988
Score = 424 bits (1089), Expect = e-116
Identities = 204/246 (82%), Positives = 222/246 (90%)
Frame = -1
Query: 740 YYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRALGKSGLRWLKIHLANLYGGGVN 561
YYPHNLDFRGRAYPMHPYLNHLGSD+CRGILEFAEGR LGKSGLRWLKIHLANLY GGV+
Sbjct: 561 YYPHNLDFRGRAYPMHPYLNHLGSDVCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVD 620
Query: 560 KLSYDGRIAFTESHLEDIFDSADRPLEGGRWWLDAEDPFQCLSVCINLAEALRSSSPETT 381
KLSYDGRI+FTE+HL+DIFDSAD+PLEG RWWL AEDPFQCL+ CINL+EALRS SPET
Sbjct: 621 KLSYDGRISFTENHLDDIFDSADQPLEGRRWWLGAEDPFQCLAACINLSEALRSPSPETA 680
Query: 380 ISHIPVHQDGSCNGLQHYAALGRDKFGAAAVNLVDGDKPADVYSGIAAGVQKIMQRDAQQ 201
SH PVHQDGSCNGLQHYAALGRDK GAAAVNLV G+KPADVYSGIA V IMQRDA++
Sbjct: 681 TSHTPVHQDGSCNGLQHYAALGRDKLGAAAVNLVGGEKPADVYSGIATRVLDIMQRDAEK 740
Query: 200 DPAENPNALLARVLVGQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKDRGVFADQRELS 21
DPA NPN++ A++LV QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK+R + AD +L
Sbjct: 741 DPAINPNSVHAKLLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCIIADDPQLY 800
Query: 20 SAASYA 3
SAA YA
Sbjct: 801 SAACYA 806
>ref|XP_002315996.2| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|550329816|gb|EEF02167.2| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 862
Score = 423 bits (1088), Expect = e-116
Identities = 205/246 (83%), Positives = 222/246 (90%)
Frame = -1
Query: 740 YYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRALGKSGLRWLKIHLANLYGGGVN 561
YYPHN+DFRGRAYPMHPYLNHLGSD+CRGILEFAEGR LGKSGLRWLKIHLANLY GGV+
Sbjct: 435 YYPHNVDFRGRAYPMHPYLNHLGSDVCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVD 494
Query: 560 KLSYDGRIAFTESHLEDIFDSADRPLEGGRWWLDAEDPFQCLSVCINLAEALRSSSPETT 381
KLSYDGRI+FTE+HL+DIFDSADRPLEG RWWL AEDPFQCL+VCINL+EALRS SPET
Sbjct: 495 KLSYDGRISFTENHLDDIFDSADRPLEGQRWWLGAEDPFQCLAVCINLSEALRSPSPETA 554
Query: 380 ISHIPVHQDGSCNGLQHYAALGRDKFGAAAVNLVDGDKPADVYSGIAAGVQKIMQRDAQQ 201
ISH PVHQDGSCNGLQHYAALGRDK GAAAVNLV G KPADVYSGIAA V IM+RDA+
Sbjct: 555 ISHTPVHQDGSCNGLQHYAALGRDKLGAAAVNLVGGGKPADVYSGIAARVLDIMRRDAEN 614
Query: 200 DPAENPNALLARVLVGQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKDRGVFADQRELS 21
DPA NPN++ A++L+ QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK+R AD +L
Sbjct: 615 DPAINPNSVHAKLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCNIADDPQLY 674
Query: 20 SAASYA 3
SAA YA
Sbjct: 675 SAACYA 680
>ref|XP_002533595.1| DNA-directed RNA polymerase 2B, chloroplast/mitochondrial
precursor, putative [Ricinus communis]
gi|223526524|gb|EEF28786.1| DNA-directed RNA polymerase
2B, chloroplast/mitochondrial precursor, putative
[Ricinus communis]
Length = 589
Score = 423 bits (1088), Expect = e-116
Identities = 203/246 (82%), Positives = 223/246 (90%)
Frame = -1
Query: 740 YYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRALGKSGLRWLKIHLANLYGGGVN 561
YYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGR LGKSGLRWLKIHLANL+ GGV+
Sbjct: 162 YYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLFAGGVD 221
Query: 560 KLSYDGRIAFTESHLEDIFDSADRPLEGGRWWLDAEDPFQCLSVCINLAEALRSSSPETT 381
KLSYDGRIAFTE+HL+DIFDSADRPLEG RWWL+AEDPFQCL+VCI+L EALRSSSPET
Sbjct: 222 KLSYDGRIAFTENHLDDIFDSADRPLEGKRWWLNAEDPFQCLAVCIDLTEALRSSSPETF 281
Query: 380 ISHIPVHQDGSCNGLQHYAALGRDKFGAAAVNLVDGDKPADVYSGIAAGVQKIMQRDAQQ 201
ISH+P+HQDGSCNGLQHYAALGRDK GAAAVNLV G+KPADVYSGIA V IM++DAQ+
Sbjct: 282 ISHVPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAVRVLDIMRKDAQK 341
Query: 200 DPAENPNALLARVLVGQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKDRGVFADQRELS 21
DP P+AL A++L+ QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK+RG AD E+
Sbjct: 342 DPKVFPDALHAKILISQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGFIADDTEIF 401
Query: 20 SAASYA 3
A+ YA
Sbjct: 402 VASCYA 407