BLASTX nr result
ID: Zingiber25_contig00027466
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00027466
(572 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III s... 273 2e-71
tpg|DAA37177.1| TPA: putative DNA-directed RNA polymerase family... 269 4e-70
gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japo... 266 2e-69
ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group] g... 266 2e-69
ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [S... 265 6e-69
ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III s... 264 1e-68
gb|EMT01541.1| DNA-directed RNA polymerase III subunit RPC1 [Aeg... 261 9e-68
gb|EMS65169.1| DNA-directed RNA polymerase III subunit rpc1 [Tri... 261 9e-68
ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III s... 255 5e-66
ref|XP_002985715.1| hypothetical protein SELMODRAFT_446351 [Sela... 249 3e-64
ref|XP_001757221.1| predicted protein [Physcomitrella patens] gi... 246 2e-63
gb|EMT10482.1| DNA-directed RNA polymerase III subunit RPC1 [Aeg... 245 5e-63
gb|EMS65535.1| DNA-directed RNA polymerase III subunit RPC1 [Tri... 242 4e-62
ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s... 239 3e-61
emb|CBI16226.3| unnamed protein product [Vitis vinifera] 236 2e-60
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s... 236 2e-60
ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [A... 233 3e-59
ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III s... 233 3e-59
ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citr... 233 3e-59
ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III s... 232 6e-59
>ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Oryza
brachyantha]
Length = 1389
Score = 273 bits (698), Expect = 2e-71
Identities = 133/190 (70%), Positives = 162/190 (85%)
Frame = +2
Query: 2 PKIKLKEQHVHSVGHDRLKIFPPEVDRIKFQSALHNLKSMLPKVVVKGFPSVDRAIIREV 181
P+IKLK +HV + +L+++P +D+ K LHNLKSMLPKV+VKG P+V+RA+I +
Sbjct: 1168 PRIKLKSEHVRVIDKAKLRVYPTAIDKSKLLYELHNLKSMLPKVIVKGIPTVERAVISQT 1227
Query: 182 KNVHSLVVEGTNLLGVMGTLGIDGRKTTSNHVMEVVRTLGIEASRTSIINEIKFTMNSHG 361
+ +SL+VEGTNLL VMGT G+D KT SNH+MEV RTLGIEA+R SII+EI++TM SHG
Sbjct: 1228 GDKYSLLVEGTNLLAVMGTPGVDAMKTKSNHIMEVNRTLGIEAARRSIIDEIQYTMTSHG 1287
Query: 362 MSIDLRHMMLLADLMTYKGEVLGITRFGISKMKESVLMLASFEKTAEHLFNASYAGRDDQ 541
M+ID RHMMLLADLMTYKGE+LGITR+GI+KMK SVLMLASFEKTAEHLFNASY+GR+DQ
Sbjct: 1288 MNIDSRHMMLLADLMTYKGEILGITRYGIAKMKSSVLMLASFEKTAEHLFNASYSGREDQ 1347
Query: 542 IEGVSECIIM 571
IEGVSECIIM
Sbjct: 1348 IEGVSECIIM 1357
>tpg|DAA37177.1| TPA: putative DNA-directed RNA polymerase family protein [Zea mays]
Length = 336
Score = 269 bits (687), Expect = 4e-70
Identities = 134/195 (68%), Positives = 161/195 (82%), Gaps = 5/195 (2%)
Frame = +2
Query: 2 PKIKLKEQHVHSVGHDRLKIFPPEVDRIKFQSALHNLKSMLPKVVVKGFPSVDRAIIREV 181
PK+KLK +HV + +L+I+P D++K Q LHNLKS+LPKV+VKG P+V+R +I EV
Sbjct: 110 PKLKLKSEHVRVIDRAKLRIYPAGTDKLKLQLELHNLKSILPKVIVKGIPTVERVVIDEV 169
Query: 182 K-----NVHSLVVEGTNLLGVMGTLGIDGRKTTSNHVMEVVRTLGIEASRTSIINEIKFT 346
K + L+VEGTNLL VMGT G+D RKT SNH+ME +TLGIEA+R SII+EI++T
Sbjct: 170 KVNNATERYQLLVEGTNLLAVMGTPGVDARKTKSNHIMETNQTLGIEAARRSIIDEIQYT 229
Query: 347 MNSHGMSIDLRHMMLLADLMTYKGEVLGITRFGISKMKESVLMLASFEKTAEHLFNASYA 526
M SHGM+ID RHMMLLADLMTYKGE+LGITR+GI+KMK SVLMLASFEKTAEHLFNASY+
Sbjct: 230 MKSHGMNIDRRHMMLLADLMTYKGEILGITRYGIAKMKSSVLMLASFEKTAEHLFNASYS 289
Query: 527 GRDDQIEGVSECIIM 571
GR DQIEGVSECIIM
Sbjct: 290 GRQDQIEGVSECIIM 304
>gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japonica Group]
Length = 1321
Score = 266 bits (681), Expect = 2e-69
Identities = 134/194 (69%), Positives = 160/194 (82%), Gaps = 4/194 (2%)
Frame = +2
Query: 2 PKIKLKEQHVHSVGHDRLKIFPPEVDRIKFQSALHNLKSMLPKVVVKGFPSVDRAIIREV 181
PKIKLK +HV + +L+I+P +D+ K LH+LKSMLPKV+VKG P+V+RA+I E
Sbjct: 1096 PKIKLKSEHVRVIDKSKLRIYPAGIDKSKLLYELHHLKSMLPKVIVKGIPTVERAVISET 1155
Query: 182 KNV----HSLVVEGTNLLGVMGTLGIDGRKTTSNHVMEVVRTLGIEASRTSIINEIKFTM 349
+ L+VEGTNLL VMGT G+D KT SNH+MEV RTLGIEA+R SII+EI++TM
Sbjct: 1156 GEENDKRYKLLVEGTNLLAVMGTPGVDAMKTKSNHIMEVNRTLGIEAARRSIIDEIQYTM 1215
Query: 350 NSHGMSIDLRHMMLLADLMTYKGEVLGITRFGISKMKESVLMLASFEKTAEHLFNASYAG 529
SHGM+ID RHMMLLADLMTYKGE+LGITR+GI+KMK SVLMLASFEKTAEHLFNASY+G
Sbjct: 1216 KSHGMNIDSRHMMLLADLMTYKGEILGITRYGIAKMKSSVLMLASFEKTAEHLFNASYSG 1275
Query: 530 RDDQIEGVSECIIM 571
R+DQIEGVSECIIM
Sbjct: 1276 REDQIEGVSECIIM 1289
>ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group]
gi|38346223|emb|CAE02045.2| OJ990528_30.3 [Oryza sativa
Japonica Group] gi|38347455|emb|CAD41360.2|
OSJNBa0076N16.24 [Oryza sativa Japonica Group]
gi|113564746|dbj|BAF15089.1| Os04g0492300 [Oryza sativa
Japonica Group] gi|116310339|emb|CAH67354.1|
OSIGBa0130B08.14 [Oryza sativa Indica Group]
gi|116310740|emb|CAH67535.1| H0425E08.3 [Oryza sativa
Indica Group] gi|215768005|dbj|BAH00234.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|218195112|gb|EEC77539.1| hypothetical protein
OsI_16437 [Oryza sativa Indica Group]
Length = 1383
Score = 266 bits (681), Expect = 2e-69
Identities = 134/194 (69%), Positives = 160/194 (82%), Gaps = 4/194 (2%)
Frame = +2
Query: 2 PKIKLKEQHVHSVGHDRLKIFPPEVDRIKFQSALHNLKSMLPKVVVKGFPSVDRAIIREV 181
PKIKLK +HV + +L+I+P +D+ K LH+LKSMLPKV+VKG P+V+RA+I E
Sbjct: 1158 PKIKLKSEHVRVIDKSKLRIYPAGIDKSKLLYELHHLKSMLPKVIVKGIPTVERAVISET 1217
Query: 182 KNV----HSLVVEGTNLLGVMGTLGIDGRKTTSNHVMEVVRTLGIEASRTSIINEIKFTM 349
+ L+VEGTNLL VMGT G+D KT SNH+MEV RTLGIEA+R SII+EI++TM
Sbjct: 1218 GEENDKRYKLLVEGTNLLAVMGTPGVDAMKTKSNHIMEVNRTLGIEAARRSIIDEIQYTM 1277
Query: 350 NSHGMSIDLRHMMLLADLMTYKGEVLGITRFGISKMKESVLMLASFEKTAEHLFNASYAG 529
SHGM+ID RHMMLLADLMTYKGE+LGITR+GI+KMK SVLMLASFEKTAEHLFNASY+G
Sbjct: 1278 KSHGMNIDSRHMMLLADLMTYKGEILGITRYGIAKMKSSVLMLASFEKTAEHLFNASYSG 1337
Query: 530 RDDQIEGVSECIIM 571
R+DQIEGVSECIIM
Sbjct: 1338 REDQIEGVSECIIM 1351
>ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [Sorghum bicolor]
gi|241937900|gb|EES11045.1| hypothetical protein
SORBIDRAFT_06g021120 [Sorghum bicolor]
Length = 1391
Score = 265 bits (677), Expect = 6e-69
Identities = 133/195 (68%), Positives = 160/195 (82%), Gaps = 5/195 (2%)
Frame = +2
Query: 2 PKIKLKEQHVHSVGHDRLKIFPPEVDRIKFQSALHNLKSMLPKVVVKGFPSVDRAIIREV 181
PKIKLK +HV + +L+I+P D+ K Q LHNLKS+LPKV+VKG P+V+R +I EV
Sbjct: 1165 PKIKLKSEHVRVIDRAKLRIYPAGTDKRKLQLELHNLKSILPKVIVKGIPTVERVVIDEV 1224
Query: 182 K-----NVHSLVVEGTNLLGVMGTLGIDGRKTTSNHVMEVVRTLGIEASRTSIINEIKFT 346
K + L+VEGTNLL VMGT G+D KT SNH+ME +TLGIEA+R SII+EI++T
Sbjct: 1225 KVKNETERYQLLVEGTNLLAVMGTPGVDATKTKSNHIMETNQTLGIEAARRSIIDEIQYT 1284
Query: 347 MNSHGMSIDLRHMMLLADLMTYKGEVLGITRFGISKMKESVLMLASFEKTAEHLFNASYA 526
M SHGM+ID RHMMLLADLMTYKGE+LGITR+GI+KMK SVLMLASFEKT+EHLFNASY+
Sbjct: 1285 MKSHGMNIDRRHMMLLADLMTYKGEILGITRYGIAKMKSSVLMLASFEKTSEHLFNASYS 1344
Query: 527 GRDDQIEGVSECIIM 571
GR+DQIEGVSECIIM
Sbjct: 1345 GREDQIEGVSECIIM 1359
>ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Setaria
italica]
Length = 1397
Score = 264 bits (674), Expect = 1e-68
Identities = 132/195 (67%), Positives = 161/195 (82%), Gaps = 5/195 (2%)
Frame = +2
Query: 2 PKIKLKEQHVHSVGHDRLKIFPPEVDRIKFQSALHNLKSMLPKVVVKGFPSVDRAIIREV 181
PKIKLK +HV + +L+I+P D+ K Q LHNLK+MLPKV+VKG P+V+R +I E
Sbjct: 1171 PKIKLKSEHVRVIDRAKLRIYPAGTDKSKLQLELHNLKAMLPKVIVKGIPTVERVVIDER 1230
Query: 182 KNV-----HSLVVEGTNLLGVMGTLGIDGRKTTSNHVMEVVRTLGIEASRTSIINEIKFT 346
K ++L+VEGTNLL VMGT G+D R T SNH+ME+ TLGIEA+R SII+EI++T
Sbjct: 1231 KKEGKLEKYNLLVEGTNLLAVMGTPGVDARNTKSNHIMEMNSTLGIEAARRSIIDEIQYT 1290
Query: 347 MNSHGMSIDLRHMMLLADLMTYKGEVLGITRFGISKMKESVLMLASFEKTAEHLFNASYA 526
M SHGM+ID+RHMMLLADLMTYKGEVLGITR+GI+KMK SVLMLASFEKT+EHLFNASY+
Sbjct: 1291 MKSHGMNIDVRHMMLLADLMTYKGEVLGITRYGIAKMKTSVLMLASFEKTSEHLFNASYS 1350
Query: 527 GRDDQIEGVSECIIM 571
GR+D+IEGVSECIIM
Sbjct: 1351 GREDEIEGVSECIIM 1365
>gb|EMT01541.1| DNA-directed RNA polymerase III subunit RPC1 [Aegilops tauschii]
Length = 1117
Score = 261 bits (667), Expect = 9e-68
Identities = 132/196 (67%), Positives = 159/196 (81%), Gaps = 6/196 (3%)
Frame = +2
Query: 2 PKIKLKEQHVHSVGHDRLKIFPPEVDRIKFQSALHNLKSMLPKVVVKGFPSVDRAIIREV 181
PK+KLK QHV + +L+I+P DR K Q LHNLKSMLPKV+VKG P+V+RA++ V
Sbjct: 889 PKLKLKSQHVRVIDEAKLRIYPDGTDRSKLQFELHNLKSMLPKVIVKGIPTVERAVVNPV 948
Query: 182 KNV------HSLVVEGTNLLGVMGTLGIDGRKTTSNHVMEVVRTLGIEASRTSIINEIKF 343
K ++L+VEGTNLL V+G G+D KT SNH+MEV +TLGIEA+R SII+EI++
Sbjct: 949 KGRDKTIERYNLLVEGTNLLAVLGAPGVDAMKTKSNHIMEVNQTLGIEAARRSIIDEIQY 1008
Query: 344 TMNSHGMSIDLRHMMLLADLMTYKGEVLGITRFGISKMKESVLMLASFEKTAEHLFNASY 523
T S+ M IDLRHMMLLADLMTYKGEVLGITR+GI+KMK SVLMLASFEKT+EHLFNASY
Sbjct: 1009 TFESNNMIIDLRHMMLLADLMTYKGEVLGITRYGIAKMKSSVLMLASFEKTSEHLFNASY 1068
Query: 524 AGRDDQIEGVSECIIM 571
AGR+DQI+GVSECIIM
Sbjct: 1069 AGREDQIDGVSECIIM 1084
>gb|EMS65169.1| DNA-directed RNA polymerase III subunit rpc1 [Triticum urartu]
Length = 1248
Score = 261 bits (667), Expect = 9e-68
Identities = 132/196 (67%), Positives = 159/196 (81%), Gaps = 6/196 (3%)
Frame = +2
Query: 2 PKIKLKEQHVHSVGHDRLKIFPPEVDRIKFQSALHNLKSMLPKVVVKGFPSVDRAIIREV 181
PK+KLK QHV + +L+I+P DR K Q LHNLKSMLPKV+VKG P+V+RA++ V
Sbjct: 1020 PKLKLKSQHVRVIDEAKLRIYPDGTDRSKLQFELHNLKSMLPKVIVKGIPTVERAVVNPV 1079
Query: 182 KNV------HSLVVEGTNLLGVMGTLGIDGRKTTSNHVMEVVRTLGIEASRTSIINEIKF 343
K ++L+VEGTNLL V+G G+D KT SNH+MEV +TLGIEA+R SII+EI++
Sbjct: 1080 KGRDKTIERYNLLVEGTNLLAVLGAPGVDAMKTKSNHIMEVNQTLGIEAARRSIIDEIQY 1139
Query: 344 TMNSHGMSIDLRHMMLLADLMTYKGEVLGITRFGISKMKESVLMLASFEKTAEHLFNASY 523
T S+ M IDLRHMMLLADLMTYKGEVLGITR+GI+KMK SVLMLASFEKT+EHLFNASY
Sbjct: 1140 TFESNNMIIDLRHMMLLADLMTYKGEVLGITRYGIAKMKSSVLMLASFEKTSEHLFNASY 1199
Query: 524 AGRDDQIEGVSECIIM 571
AGR+DQI+GVSECIIM
Sbjct: 1200 AGREDQIDGVSECIIM 1215
>ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Brachypodium distachyon]
Length = 1392
Score = 255 bits (652), Expect = 5e-66
Identities = 130/196 (66%), Positives = 157/196 (80%), Gaps = 6/196 (3%)
Frame = +2
Query: 2 PKIKLKEQHVHSVGHDRLKIFPPEVDRIKFQSALHNLKSMLPKVVVKGFPSVDRAIIREV 181
PKIKLK +HV + +L+I+P D+ K Q LH LKSMLPKV+VKG P+V+RA++ V
Sbjct: 1165 PKIKLKSEHVRVIDGAKLRIYPTGTDKSKLQLELHTLKSMLPKVIVKGIPTVERAVVNPV 1224
Query: 182 KNV------HSLVVEGTNLLGVMGTLGIDGRKTTSNHVMEVVRTLGIEASRTSIINEIKF 343
K ++L+VEGTNLL V+GT G+D +KT SNH+MEV +TLGIEA+R SII+EI++
Sbjct: 1225 KRPDKTLDRYNLLVEGTNLLKVLGTPGVDAKKTKSNHIMEVNQTLGIEAARRSIIDEIRY 1284
Query: 344 TMNSHGMSIDLRHMMLLADLMTYKGEVLGITRFGISKMKESVLMLASFEKTAEHLFNASY 523
T S+ M ID RHMMLLADLMTYKGEVLGITRFGI KMK SVLMLASFEKT EHLFNASY
Sbjct: 1285 TFESNNMIIDQRHMMLLADLMTYKGEVLGITRFGIVKMKSSVLMLASFEKTLEHLFNASY 1344
Query: 524 AGRDDQIEGVSECIIM 571
+GR+D+IEGVSECIIM
Sbjct: 1345 SGREDEIEGVSECIIM 1360
>ref|XP_002985715.1| hypothetical protein SELMODRAFT_446351 [Selaginella moellendorffii]
gi|300146624|gb|EFJ13293.1| hypothetical protein
SELMODRAFT_446351 [Selaginella moellendorffii]
Length = 1393
Score = 249 bits (636), Expect = 3e-64
Identities = 130/194 (67%), Positives = 156/194 (80%), Gaps = 4/194 (2%)
Frame = +2
Query: 2 PKIK---LKEQHVHSVGHDR-LKIFPPEVDRIKFQSALHNLKSMLPKVVVKGFPSVDRAI 169
PKIK LKEQHV V DR + + PE DR K ALH+L++MLPKV+VKG P+V+RA+
Sbjct: 1169 PKIKSMKLKEQHV-KVNDDRSISLTTPESDRKKMLFALHSLQNMLPKVIVKGIPTVERAV 1227
Query: 170 IREVKNVHSLVVEGTNLLGVMGTLGIDGRKTTSNHVMEVVRTLGIEASRTSIINEIKFTM 349
I + K ++L+VEGTNL VMGT G+DGR+TTSNH+ E V LGIEA+R II EI++TM
Sbjct: 1228 INQEKGKYNLLVEGTNLKAVMGTEGVDGRETTSNHIFETVEVLGIEAARNGIIKEIQYTM 1287
Query: 350 NSHGMSIDLRHMMLLADLMTYKGEVLGITRFGISKMKESVLMLASFEKTAEHLFNASYAG 529
SHGMSID RHMMLLAD+MTY+GE+LGITRFG++KMK+SVLMLASFEKT +HLF AS G
Sbjct: 1288 GSHGMSIDQRHMMLLADVMTYRGEILGITRFGMAKMKDSVLMLASFEKTTDHLFAASVHG 1347
Query: 530 RDDQIEGVSECIIM 571
R DQIEGVSECIIM
Sbjct: 1348 RTDQIEGVSECIIM 1361
>ref|XP_001757221.1| predicted protein [Physcomitrella patens] gi|162691719|gb|EDQ78080.1|
predicted protein [Physcomitrella patens]
Length = 1397
Score = 246 bits (629), Expect = 2e-63
Identities = 123/190 (64%), Positives = 155/190 (81%)
Frame = +2
Query: 2 PKIKLKEQHVHSVGHDRLKIFPPEVDRIKFQSALHNLKSMLPKVVVKGFPSVDRAIIREV 181
PKIKLK ++ V D+L + PP+ D+ K LH+L +MLPKV+VKG PSV+RA+I +
Sbjct: 1176 PKIKLKHVNIRIVDRDKLIVIPPDQDKGKLYFYLHSLCNMLPKVIVKGIPSVERAVINKE 1235
Query: 182 KNVHSLVVEGTNLLGVMGTLGIDGRKTTSNHVMEVVRTLGIEASRTSIINEIKFTMNSHG 361
K V++L+VEGTNL VMG G++G+ T SNHV+E +TLGIEA+R II+EI++TM SHG
Sbjct: 1236 KGVYNLLVEGTNLKAVMGISGVNGKLTKSNHVIEAEQTLGIEAARNVIIDEIQYTMGSHG 1295
Query: 362 MSIDLRHMMLLADLMTYKGEVLGITRFGISKMKESVLMLASFEKTAEHLFNASYAGRDDQ 541
M+ID RHMMLLAD+MTYKGEVLGITRFGI+KMK+SVLMLASFEKT +HLF+A+ GR D+
Sbjct: 1296 MTIDARHMMLLADVMTYKGEVLGITRFGIAKMKDSVLMLASFEKTTDHLFDAAIHGRVDK 1355
Query: 542 IEGVSECIIM 571
IEGVSECIIM
Sbjct: 1356 IEGVSECIIM 1365
>gb|EMT10482.1| DNA-directed RNA polymerase III subunit RPC1 [Aegilops tauschii]
Length = 832
Score = 245 bits (626), Expect = 5e-63
Identities = 122/196 (62%), Positives = 157/196 (80%), Gaps = 6/196 (3%)
Frame = +2
Query: 2 PKIKLKEQHVHSVGHDRLKIFPPEVDRIKFQSALHNLKSMLPKVVVKGFPSVDRAIIREV 181
PKIKLK +HV + +L+I+P D+ K Q LHNLKSMLPK++VKG +V+RA++ V
Sbjct: 605 PKIKLKSEHVRVIDETKLRIYPTGTDKSKLQLELHNLKSMLPKLIVKGISTVERAVVNPV 664
Query: 182 K------NVHSLVVEGTNLLGVMGTLGIDGRKTTSNHVMEVVRTLGIEASRTSIINEIKF 343
+ ++L+VEGTNLL V+GT G+D ++T SNH++EV +TLGIEA+R SII+EI++
Sbjct: 665 LRRDGTFDRYNLLVEGTNLLKVLGTPGVDAKRTKSNHILEVNKTLGIEAARRSIIDEIRY 724
Query: 344 TMNSHGMSIDLRHMMLLADLMTYKGEVLGITRFGISKMKESVLMLASFEKTAEHLFNASY 523
T ++ M IDLRHMMLLADLMTYKGE+LGIT GI+KMK SVLML+SFE+ +EHLFNASY
Sbjct: 725 TFENNNMMIDLRHMMLLADLMTYKGEILGITAGGIAKMKSSVLMLSSFERASEHLFNASY 784
Query: 524 AGRDDQIEGVSECIIM 571
AGR+DQIEGVSECIIM
Sbjct: 785 AGREDQIEGVSECIIM 800
>gb|EMS65535.1| DNA-directed RNA polymerase III subunit RPC1 [Triticum urartu]
Length = 689
Score = 242 bits (618), Expect = 4e-62
Identities = 121/196 (61%), Positives = 156/196 (79%), Gaps = 6/196 (3%)
Frame = +2
Query: 2 PKIKLKEQHVHSVGHDRLKIFPPEVDRIKFQSALHNLKSMLPKVVVKGFPSVDRAIIREV 181
PKIKLK +HV + +L+I+P D+ K Q LHNLKSMLPK++VKG SV+RA++ V
Sbjct: 462 PKIKLKSEHVRVIDEAKLRIYPTGKDKSKLQLELHNLKSMLPKLIVKGISSVERAVVNPV 521
Query: 182 K------NVHSLVVEGTNLLGVMGTLGIDGRKTTSNHVMEVVRTLGIEASRTSIINEIKF 343
+ ++L+VEGTNL+ V+GT G+D ++T SNH++EV +TLGIEA+R SII+EI++
Sbjct: 522 LRRDGTFDRYNLLVEGTNLMKVLGTPGVDAKRTKSNHILEVNKTLGIEAARRSIIDEIRY 581
Query: 344 TMNSHGMSIDLRHMMLLADLMTYKGEVLGITRFGISKMKESVLMLASFEKTAEHLFNASY 523
T ++ M IDLRHMMLLADLMTYKGE+LGIT GI+KMK SVLML+SFE+ +EHLFNA Y
Sbjct: 582 TFENNNMMIDLRHMMLLADLMTYKGEILGITAGGIAKMKSSVLMLSSFERASEHLFNALY 641
Query: 524 AGRDDQIEGVSECIIM 571
AGR+DQIEGVSECIIM
Sbjct: 642 AGREDQIEGVSECIIM 657
>ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Cucumis
sativus]
Length = 1400
Score = 239 bits (611), Expect = 3e-61
Identities = 123/196 (62%), Positives = 151/196 (77%), Gaps = 6/196 (3%)
Frame = +2
Query: 2 PKIKLKEQHVHSVGHDRLKIFPPEVDRIKFQSALHNLKSMLPKVVVKGFPSVDRAIIREV 181
PK+KLK +H++ + +L++ P + DR K LH LK+MLP VVVKG +V RA+I+E
Sbjct: 1173 PKLKLKHEHINVLDDRKLRVLPQDADRNKLHFNLHFLKNMLPGVVVKGIKTVGRAVIKEE 1232
Query: 182 KNV------HSLVVEGTNLLGVMGTLGIDGRKTTSNHVMEVVRTLGIEASRTSIINEIKF 343
K+ SL+VEGT L VMGT G+DG T SNH++EV + LGIEA+R II EIK+
Sbjct: 1233 KDKARNAKKFSLLVEGTGLQAVMGTEGVDGCNTKSNHIIEVQQVLGIEAARKCIIEEIKY 1292
Query: 344 TMNSHGMSIDLRHMMLLADLMTYKGEVLGITRFGISKMKESVLMLASFEKTAEHLFNASY 523
TM SHGMSID+RHMMLL DLMT++GEVLGITRFGI KM +SVLMLASFEKTA+HLFNAS
Sbjct: 1293 TMESHGMSIDIRHMMLLGDLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASV 1352
Query: 524 AGRDDQIEGVSECIIM 571
GRDD+IEGVSEC+IM
Sbjct: 1353 NGRDDKIEGVSECVIM 1368
>emb|CBI16226.3| unnamed protein product [Vitis vinifera]
Length = 1819
Score = 236 bits (603), Expect = 2e-60
Identities = 123/190 (64%), Positives = 155/190 (81%), Gaps = 1/190 (0%)
Frame = +2
Query: 5 KIKLKEQHVHSVGHDRLKIFPPEVDRIKFQSALHNLKSMLPKVVVKGFPSVDRAIIREVK 184
+IKLK+QH+ + +L++ P + DR LH LK++LP VVVKG +V+RA+I +
Sbjct: 1599 RIKLKQQHIKVLDAGKLEVHP-QGDRSTIHFELHALKNLLPTVVVKGIETVERAVINKDN 1657
Query: 185 NV-HSLVVEGTNLLGVMGTLGIDGRKTTSNHVMEVVRTLGIEASRTSIINEIKFTMNSHG 361
V ++L+VEGT L VMGT G+ GR+TTSNH++EV +TLGIEA+R IINEI++TM SHG
Sbjct: 1658 KVKYNLLVEGTGLQTVMGTEGVIGRETTSNHIIEVQQTLGIEAARKCIINEIQYTMASHG 1717
Query: 362 MSIDLRHMMLLADLMTYKGEVLGITRFGISKMKESVLMLASFEKTAEHLFNASYAGRDDQ 541
MSID+RHMMLLADLMT++GEVLGITRFGI KM +SVLMLASFEKTA+HLFNAS +GRDD+
Sbjct: 1718 MSIDIRHMMLLADLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVSGRDDK 1777
Query: 542 IEGVSECIIM 571
IEGVSECIIM
Sbjct: 1778 IEGVSECIIM 1787
>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
vinifera]
Length = 1383
Score = 236 bits (603), Expect = 2e-60
Identities = 123/190 (64%), Positives = 155/190 (81%), Gaps = 1/190 (0%)
Frame = +2
Query: 5 KIKLKEQHVHSVGHDRLKIFPPEVDRIKFQSALHNLKSMLPKVVVKGFPSVDRAIIREVK 184
+IKLK+QH+ + +L++ P + DR LH LK++LP VVVKG +V+RA+I +
Sbjct: 1163 RIKLKQQHIKVLDAGKLEVHP-QGDRSTIHFELHALKNLLPTVVVKGIETVERAVINKDN 1221
Query: 185 NV-HSLVVEGTNLLGVMGTLGIDGRKTTSNHVMEVVRTLGIEASRTSIINEIKFTMNSHG 361
V ++L+VEGT L VMGT G+ GR+TTSNH++EV +TLGIEA+R IINEI++TM SHG
Sbjct: 1222 KVKYNLLVEGTGLQTVMGTEGVIGRETTSNHIIEVQQTLGIEAARKCIINEIQYTMASHG 1281
Query: 362 MSIDLRHMMLLADLMTYKGEVLGITRFGISKMKESVLMLASFEKTAEHLFNASYAGRDDQ 541
MSID+RHMMLLADLMT++GEVLGITRFGI KM +SVLMLASFEKTA+HLFNAS +GRDD+
Sbjct: 1282 MSIDIRHMMLLADLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVSGRDDK 1341
Query: 542 IEGVSECIIM 571
IEGVSECIIM
Sbjct: 1342 IEGVSECIIM 1351
>ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [Amborella trichopoda]
gi|548832896|gb|ERM95665.1| hypothetical protein
AMTR_s00023p00196820 [Amborella trichopoda]
Length = 1383
Score = 233 bits (594), Expect = 3e-59
Identities = 119/175 (68%), Positives = 146/175 (83%)
Frame = +2
Query: 47 DRLKIFPPEVDRIKFQSALHNLKSMLPKVVVKGFPSVDRAIIREVKNVHSLVVEGTNLLG 226
D+LKI PE+ R + +LH L+S+LPK++VKG P+V+RA+I VK +L+VEGTNLL
Sbjct: 1177 DKLKILLPEIGRKEVLYSLHLLQSLLPKIIVKGIPTVERAVINNVKGKLNLLVEGTNLLA 1236
Query: 227 VMGTLGIDGRKTTSNHVMEVVRTLGIEASRTSIINEIKFTMNSHGMSIDLRHMMLLADLM 406
VMGT G+DGR TTSNH++EV TLGIEA+R SII+EI++TM SHGMSIDLRHMMLLADLM
Sbjct: 1237 VMGTPGVDGRNTTSNHIVEVEGTLGIEAARKSIIDEIQYTMKSHGMSIDLRHMMLLADLM 1296
Query: 407 TYKGEVLGITRFGISKMKESVLMLASFEKTAEHLFNASYAGRDDQIEGVSECIIM 571
T++G VLGI RFGI+KMKESVLMLASFE+TA+ LF+A+ GR D I GVSECIIM
Sbjct: 1297 TFRGLVLGIQRFGITKMKESVLMLASFERTADILFDATTRGRVDTIAGVSECIIM 1351
>ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
X1 [Citrus sinensis] gi|568870034|ref|XP_006488217.1|
PREDICTED: DNA-directed RNA polymerase III subunit
rpc1-like isoform X2 [Citrus sinensis]
Length = 1404
Score = 233 bits (593), Expect = 3e-59
Identities = 125/202 (61%), Positives = 151/202 (74%), Gaps = 12/202 (5%)
Frame = +2
Query: 2 PKIKLKEQHVHSVGHDRLKIFPPEVDRIKFQSALHNLKSMLPKVVVKGFPSVDRAIIREV 181
PKIKLK+QH+ + +L+IFPP VD+ K L++LK++LP V+VKG +V+R +I E
Sbjct: 1171 PKIKLKQQHIKVLDFRKLEIFPP-VDKSKIHFELYSLKNVLPMVIVKGIKTVERVVIAEK 1229
Query: 182 ------------KNVHSLVVEGTNLLGVMGTLGIDGRKTTSNHVMEVVRTLGIEASRTSI 325
K + L+VEGT L VMG GIDG KT SNH+ EV +TLGIEA+R I
Sbjct: 1230 EKEKRKVKENGEKKKYRLLVEGTGLQAVMGAEGIDGCKTKSNHIFEVQQTLGIEAARICI 1289
Query: 326 INEIKFTMNSHGMSIDLRHMMLLADLMTYKGEVLGITRFGISKMKESVLMLASFEKTAEH 505
I+EI TM +HGMSID RHMMLLADLMT++GEVLGITRFGI KM +SVLMLASFEKTA+H
Sbjct: 1290 IDEINETMKAHGMSIDKRHMMLLADLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADH 1349
Query: 506 LFNASYAGRDDQIEGVSECIIM 571
LFNAS GRDD+IEGVSECIIM
Sbjct: 1350 LFNASVNGRDDRIEGVSECIIM 1371
>ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citrus clementina]
gi|557526635|gb|ESR37941.1| hypothetical protein
CICLE_v10027681mg [Citrus clementina]
Length = 1397
Score = 233 bits (593), Expect = 3e-59
Identities = 125/202 (61%), Positives = 151/202 (74%), Gaps = 12/202 (5%)
Frame = +2
Query: 2 PKIKLKEQHVHSVGHDRLKIFPPEVDRIKFQSALHNLKSMLPKVVVKGFPSVDRAIIREV 181
PKIKLK+QH+ + +L+IFPP VD+ K L++LK++LP V+VKG +V+R +I E
Sbjct: 1164 PKIKLKQQHIKVLDFRKLEIFPP-VDKSKIHFELYSLKNVLPMVIVKGIKTVERVVIAEK 1222
Query: 182 ------------KNVHSLVVEGTNLLGVMGTLGIDGRKTTSNHVMEVVRTLGIEASRTSI 325
K + L+VEGT L VMG GIDG KT SNH+ EV +TLGIEA+R I
Sbjct: 1223 EKEKRKVKENGEKKKYRLLVEGTGLQAVMGAEGIDGCKTKSNHIFEVQQTLGIEAARICI 1282
Query: 326 INEIKFTMNSHGMSIDLRHMMLLADLMTYKGEVLGITRFGISKMKESVLMLASFEKTAEH 505
I+EI TM +HGMSID RHMMLLADLMT++GEVLGITRFGI KM +SVLMLASFEKTA+H
Sbjct: 1283 IDEINETMKAHGMSIDKRHMMLLADLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADH 1342
Query: 506 LFNASYAGRDDQIEGVSECIIM 571
LFNAS GRDD+IEGVSECIIM
Sbjct: 1343 LFNASVNGRDDRIEGVSECIIM 1364
>ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
X1 [Solanum tuberosum]
Length = 1394
Score = 232 bits (591), Expect = 6e-59
Identities = 123/199 (61%), Positives = 151/199 (75%), Gaps = 10/199 (5%)
Frame = +2
Query: 5 KIKLKEQHVHSVGHDRLKIFPPEVDRIKFQSALHNLKSMLPKVVVKGFPSVDRAII---- 172
KIKLKE + + +L++FP + ++ K LH LK+ LP VVVKG +V RA++
Sbjct: 1161 KIKLKEHQIKVLNPRKLEVFP-QANKDKLHFELHRLKNKLPAVVVKGITTVQRAVVNKEQ 1219
Query: 173 -REVKN-----VHSLVVEGTNLLGVMGTLGIDGRKTTSNHVMEVVRTLGIEASRTSIINE 334
++ KN + L+VEGT LL VMG G+DGR T SNH+MEV TLGIEA+R SII+E
Sbjct: 1220 QKDRKNDVKGETYELLVEGTGLLAVMGIEGVDGRYTKSNHIMEVQNTLGIEAARVSIIDE 1279
Query: 335 IKFTMNSHGMSIDLRHMMLLADLMTYKGEVLGITRFGISKMKESVLMLASFEKTAEHLFN 514
I +TM+SHGM+IDLRHMMLLADLMTYKGEVLGITR G+ KMK+SVLMLASFEKT +HLFN
Sbjct: 1280 INYTMSSHGMTIDLRHMMLLADLMTYKGEVLGITRHGVQKMKDSVLMLASFEKTTDHLFN 1339
Query: 515 ASYAGRDDQIEGVSECIIM 571
AS GRDD+IEGV+ECIIM
Sbjct: 1340 ASVNGRDDKIEGVTECIIM 1358