BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00027465
         (285 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III s...    65   9e-09
ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III s...    62   6e-08
tpg|DAA37177.1| TPA: putative DNA-directed RNA polymerase family...    62   6e-08
ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [S...    62   6e-08
gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japo...    62   6e-08
ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group] g...    62   6e-08
gb|EMS65535.1| DNA-directed RNA polymerase III subunit RPC1 [Tri...    60   4e-07
dbj|BAA96933.1| DNA-directed RNA polymerase II largest chain [Ar...    59   9e-07
ref|NP_001190573.1| nuclear RNA polymerase C1 [Arabidopsis thali...    59   9e-07
ref|NP_200812.2| nuclear RNA polymerase C1 [Arabidopsis thaliana...    59   9e-07
gb|EMT01541.1| DNA-directed RNA polymerase III subunit RPC1 [Aeg...    58   1e-06
gb|EMS65169.1| DNA-directed RNA polymerase III subunit rpc1 [Tri...    58   1e-06
gb|EMT10482.1| DNA-directed RNA polymerase III subunit RPC1 [Aeg...    57   2e-06
ref|XP_006400888.1| hypothetical protein EUTSA_v10012446mg [Eutr...    55   7e-06
ref|XP_006279465.1| hypothetical protein CARUB_v10025743mg [Caps...    55   7e-06
ref|XP_002864665.1| hypothetical protein ARALYDRAFT_496142 [Arab...    55   7e-06
emb|CBI16226.3| unnamed protein product [Vitis vinifera]               55   1e-05
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s...    55   1e-05

>ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Setaria
            italica]
          Length = 1397

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 30/34 (88%), Positives = 33/34 (97%)
 Frame = -3

Query: 283  IMGIPMQLGTGILRVRQRVDNLPELKYAPDPILS 182
            IMGIPMQLGTGIL+VRQR+D+LPELKY PDPILS
Sbjct: 1364 IMGIPMQLGTGILKVRQRLDHLPELKYQPDPILS 1397


>ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Oryza
            brachyantha]
          Length = 1389

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 28/34 (82%), Positives = 32/34 (94%)
 Frame = -3

Query: 283  IMGIPMQLGTGILRVRQRVDNLPELKYAPDPILS 182
            IMGIPMQLGTGIL+VRQR+D+LPE KY PDPIL+
Sbjct: 1356 IMGIPMQLGTGILKVRQRLDHLPEFKYQPDPILA 1389


>tpg|DAA37177.1| TPA: putative DNA-directed RNA polymerase family protein [Zea mays]
          Length = 336

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 28/34 (82%), Positives = 32/34 (94%)
 Frame = -3

Query: 283 IMGIPMQLGTGILRVRQRVDNLPELKYAPDPILS 182
           IMGIPMQLGTGIL+VRQR+D++PE KY PDPILS
Sbjct: 303 IMGIPMQLGTGILKVRQRLDHVPEFKYQPDPILS 336


>ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [Sorghum bicolor]
            gi|241937900|gb|EES11045.1| hypothetical protein
            SORBIDRAFT_06g021120 [Sorghum bicolor]
          Length = 1391

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 28/34 (82%), Positives = 32/34 (94%)
 Frame = -3

Query: 283  IMGIPMQLGTGILRVRQRVDNLPELKYAPDPILS 182
            IMGIPMQLGTGIL+VRQR+D++PE KY PDPILS
Sbjct: 1358 IMGIPMQLGTGILKVRQRLDHVPEFKYQPDPILS 1391


>gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japonica Group]
          Length = 1321

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 28/34 (82%), Positives = 32/34 (94%)
 Frame = -3

Query: 283  IMGIPMQLGTGILRVRQRVDNLPELKYAPDPILS 182
            IMGIPMQLGTGIL+VRQR+D+LPE KY PDPIL+
Sbjct: 1288 IMGIPMQLGTGILKVRQRLDHLPEFKYQPDPILA 1321


>ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group]
            gi|38346223|emb|CAE02045.2| OJ990528_30.3 [Oryza sativa
            Japonica Group] gi|38347455|emb|CAD41360.2|
            OSJNBa0076N16.24 [Oryza sativa Japonica Group]
            gi|113564746|dbj|BAF15089.1| Os04g0492300 [Oryza sativa
            Japonica Group] gi|116310339|emb|CAH67354.1|
            OSIGBa0130B08.14 [Oryza sativa Indica Group]
            gi|116310740|emb|CAH67535.1| H0425E08.3 [Oryza sativa
            Indica Group] gi|215768005|dbj|BAH00234.1| unnamed
            protein product [Oryza sativa Japonica Group]
            gi|218195112|gb|EEC77539.1| hypothetical protein
            OsI_16437 [Oryza sativa Indica Group]
          Length = 1383

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 28/34 (82%), Positives = 32/34 (94%)
 Frame = -3

Query: 283  IMGIPMQLGTGILRVRQRVDNLPELKYAPDPILS 182
            IMGIPMQLGTGIL+VRQR+D+LPE KY PDPIL+
Sbjct: 1350 IMGIPMQLGTGILKVRQRLDHLPEFKYQPDPILA 1383


>gb|EMS65535.1| DNA-directed RNA polymerase III subunit RPC1 [Triticum urartu]
          Length = 689

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 27/33 (81%), Positives = 30/33 (90%)
 Frame = -3

Query: 283 IMGIPMQLGTGILRVRQRVDNLPELKYAPDPIL 185
           IMGIPMQLGTGIL+VRQR+ +LPE KY PDPIL
Sbjct: 656 IMGIPMQLGTGILKVRQRLQDLPEFKYQPDPIL 688


>dbj|BAA96933.1| DNA-directed RNA polymerase II largest chain [Arabidopsis thaliana]
          Length = 1383

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 26/34 (76%), Positives = 31/34 (91%)
 Frame = -3

Query: 283  IMGIPMQLGTGILRVRQRVDNLPELKYAPDPILS 182
            IMGIPM+LGTGIL+V QR D+LP+LKY PDPI+S
Sbjct: 1350 IMGIPMKLGTGILKVLQRTDDLPKLKYGPDPIIS 1383


>ref|NP_001190573.1| nuclear RNA polymerase C1 [Arabidopsis thaliana]
            gi|332009887|gb|AED97270.1| nuclear RNA polymerase C1
            [Arabidopsis thaliana]
          Length = 1391

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 26/34 (76%), Positives = 31/34 (91%)
 Frame = -3

Query: 283  IMGIPMQLGTGILRVRQRVDNLPELKYAPDPILS 182
            IMGIPM+LGTGIL+V QR D+LP+LKY PDPI+S
Sbjct: 1358 IMGIPMKLGTGILKVLQRTDDLPKLKYGPDPIIS 1391


>ref|NP_200812.2| nuclear RNA polymerase C1 [Arabidopsis thaliana]
            gi|332009886|gb|AED97269.1| nuclear RNA polymerase C1
            [Arabidopsis thaliana]
          Length = 1376

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 26/34 (76%), Positives = 31/34 (91%)
 Frame = -3

Query: 283  IMGIPMQLGTGILRVRQRVDNLPELKYAPDPILS 182
            IMGIPM+LGTGIL+V QR D+LP+LKY PDPI+S
Sbjct: 1343 IMGIPMKLGTGILKVLQRTDDLPKLKYGPDPIIS 1376


>gb|EMT01541.1| DNA-directed RNA polymerase III subunit RPC1 [Aegilops tauschii]
          Length = 1117

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 26/34 (76%), Positives = 31/34 (91%)
 Frame = -3

Query: 283  IMGIPMQLGTGILRVRQRVDNLPELKYAPDPILS 182
            IMGIPMQLGTGIL+VRQR+++LPE KY P PI+S
Sbjct: 1083 IMGIPMQLGTGILKVRQRLESLPEFKYQPAPIMS 1116


>gb|EMS65169.1| DNA-directed RNA polymerase III subunit rpc1 [Triticum urartu]
          Length = 1248

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 26/34 (76%), Positives = 31/34 (91%)
 Frame = -3

Query: 283  IMGIPMQLGTGILRVRQRVDNLPELKYAPDPILS 182
            IMGIPMQLGTGIL+VRQR+++LPE KY P PI+S
Sbjct: 1214 IMGIPMQLGTGILKVRQRLESLPEFKYQPAPIMS 1247


>gb|EMT10482.1| DNA-directed RNA polymerase III subunit RPC1 [Aegilops tauschii]
          Length = 832

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 26/33 (78%), Positives = 29/33 (87%)
 Frame = -3

Query: 283 IMGIPMQLGTGILRVRQRVDNLPELKYAPDPIL 185
           IMGIP QLGTGIL+VRQR+ +LPE KY PDPIL
Sbjct: 799 IMGIPKQLGTGILKVRQRLQDLPEFKYQPDPIL 831


>ref|XP_006400888.1| hypothetical protein EUTSA_v10012446mg [Eutrema salsugineum]
            gi|557101978|gb|ESQ42341.1| hypothetical protein
            EUTSA_v10012446mg [Eutrema salsugineum]
          Length = 1375

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 25/34 (73%), Positives = 30/34 (88%)
 Frame = -3

Query: 283  IMGIPMQLGTGILRVRQRVDNLPELKYAPDPILS 182
            IMGIPM+LGTGIL+V QR D+LP+LKY  DPI+S
Sbjct: 1342 IMGIPMKLGTGILKVLQRTDDLPKLKYGADPIIS 1375


>ref|XP_006279465.1| hypothetical protein CARUB_v10025743mg [Capsella rubella]
            gi|482548169|gb|EOA12363.1| hypothetical protein
            CARUB_v10025743mg [Capsella rubella]
          Length = 1376

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 25/34 (73%), Positives = 30/34 (88%)
 Frame = -3

Query: 283  IMGIPMQLGTGILRVRQRVDNLPELKYAPDPILS 182
            IMGIPM+LGTGIL+V QR D+LP+LKY  DPI+S
Sbjct: 1343 IMGIPMKLGTGILKVLQRTDDLPKLKYGADPIIS 1376


>ref|XP_002864665.1| hypothetical protein ARALYDRAFT_496142 [Arabidopsis lyrata subsp.
            lyrata] gi|297310500|gb|EFH40924.1| hypothetical protein
            ARALYDRAFT_496142 [Arabidopsis lyrata subsp. lyrata]
          Length = 1376

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 25/34 (73%), Positives = 30/34 (88%)
 Frame = -3

Query: 283  IMGIPMQLGTGILRVRQRVDNLPELKYAPDPILS 182
            IMGIPM+LGTGIL+V QR D+LP+LKY  DPI+S
Sbjct: 1343 IMGIPMKLGTGILKVLQRTDDLPKLKYGADPIIS 1376


>emb|CBI16226.3| unnamed protein product [Vitis vinifera]
          Length = 1819

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/34 (73%), Positives = 29/34 (85%)
 Frame = -3

Query: 283  IMGIPMQLGTGILRVRQRVDNLPELKYAPDPILS 182
            IMGIPMQLGTGIL+VRQR+  +PEL Y  DPI+S
Sbjct: 1786 IMGIPMQLGTGILKVRQRLQQVPELSYGLDPIIS 1819


>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
            vinifera]
          Length = 1383

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/34 (73%), Positives = 29/34 (85%)
 Frame = -3

Query: 283  IMGIPMQLGTGILRVRQRVDNLPELKYAPDPILS 182
            IMGIPMQLGTGIL+VRQR+  +PEL Y  DPI+S
Sbjct: 1350 IMGIPMQLGTGILKVRQRLQQVPELSYGLDPIIS 1383