BLASTX nr result

ID: Zingiber25_contig00027396 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00027396
         (380 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279804.1| PREDICTED: ABC transporter F family member 5...    64   3e-08
gb|EOX92290.1| General control non-repressible 5 isoform 3, part...    60   2e-07
gb|EOX92289.1| General control non-repressible 5 isoform 2 [Theo...    60   2e-07
gb|EOX92288.1| General control non-repressible 5 isoform 1 [Theo...    60   2e-07
emb|CBI21514.3| unnamed protein product [Vitis vinifera]               60   3e-07
gb|EXC19706.1| ABC transporter F family member 5 [Morus notabilis]     58   1e-06
ref|XP_006428017.1| hypothetical protein CICLE_v10025045mg [Citr...    57   3e-06

>ref|XP_002279804.1| PREDICTED: ABC transporter F family member 5 [Vitis vinifera]
          Length = 718

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 45/129 (34%), Positives = 62/129 (48%), Gaps = 6/129 (4%)
 Frame = -1

Query: 371 QCFSLRSGFLSGSPLLDAGKVRILPRAWXXXXXXXXXXSRRFVV---SFAKINSFARLRI 201
           QC  LRS F +GS LLDA K  + P             S   +    S  K ++    R 
Sbjct: 8   QCIDLRSSFFTGSALLDARKTGLRPHFRPHTRSIPISASTHSITGSNSSIKTSALFNSRT 67

Query: 200 RRFGIPXXXXXXXXXXXXXXD---LESLFSERVVEDSSRNQGKKKSNTGASSVSSGVRLE 30
           R   +                   +ESLFS   V+++ + +  K+SN+GASS+SSGVRLE
Sbjct: 68  RSSMVSSKAVAMDTSVAETMSREDIESLFSNNSVDEAYQKRVNKQSNSGASSISSGVRLE 127

Query: 29  NISKSFKGV 3
           N+SK +KGV
Sbjct: 128 NVSKGYKGV 136


>gb|EOX92290.1| General control non-repressible 5 isoform 3, partial [Theobroma
           cacao]
          Length = 486

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 28/45 (62%), Positives = 36/45 (80%)
 Frame = -1

Query: 137 LESLFSERVVEDSSRNQGKKKSNTGASSVSSGVRLENISKSFKGV 3
           +ESLFS   VE+  R +  K+SNTG+S +SSGV+LENISKS+KGV
Sbjct: 52  IESLFSTNTVEEVDRKRANKRSNTGSSGISSGVKLENISKSYKGV 96


>gb|EOX92289.1| General control non-repressible 5 isoform 2 [Theobroma cacao]
          Length = 564

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 28/45 (62%), Positives = 36/45 (80%)
 Frame = -1

Query: 137 LESLFSERVVEDSSRNQGKKKSNTGASSVSSGVRLENISKSFKGV 3
           +ESLFS   VE+  R +  K+SNTG+S +SSGV+LENISKS+KGV
Sbjct: 64  IESLFSTNTVEEVDRKRANKRSNTGSSGISSGVKLENISKSYKGV 108


>gb|EOX92288.1| General control non-repressible 5 isoform 1 [Theobroma cacao]
          Length = 690

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 28/45 (62%), Positives = 36/45 (80%)
 Frame = -1

Query: 137 LESLFSERVVEDSSRNQGKKKSNTGASSVSSGVRLENISKSFKGV 3
           +ESLFS   VE+  R +  K+SNTG+S +SSGV+LENISKS+KGV
Sbjct: 64  IESLFSTNTVEEVDRKRANKRSNTGSSGISSGVKLENISKSYKGV 108


>emb|CBI21514.3| unnamed protein product [Vitis vinifera]
          Length = 655

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 46/126 (36%), Positives = 62/126 (49%), Gaps = 3/126 (2%)
 Frame = -1

Query: 371 QCFSLRSGFLSGSPLLDAGKVRILPRAWXXXXXXXXXXSRRFVVSFAKI---NSFARLRI 201
           QC  LRS F +GS LLDA K      +           +R  +VS   +    S A    
Sbjct: 8   QCIDLRSSFFTGSALLDARKTG--SNSSIKTSALFNSRTRSSMVSSKAVAMDTSVAETMS 65

Query: 200 RRFGIPXXXXXXXXXXXXXXDLESLFSERVVEDSSRNQGKKKSNTGASSVSSGVRLENIS 21
           R                   D+ESLFS   V+++ + +  K+SN+GASS+SSGVRLEN+S
Sbjct: 66  RE------------------DIESLFSNNSVDEAYQKRVNKQSNSGASSISSGVRLENVS 107

Query: 20  KSFKGV 3
           K +KGV
Sbjct: 108 KGYKGV 113


>gb|EXC19706.1| ABC transporter F family member 5 [Morus notabilis]
          Length = 715

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 42/126 (33%), Positives = 61/126 (48%), Gaps = 7/126 (5%)
 Frame = -1

Query: 359 LRSGFLSGSPLLDAGKVRI--LPRAWXXXXXXXXXXS-----RRFVVSFAKINSFARLRI 201
           LRS F +G+ LLDA K  +  LPR+                 R  + S  K +S    R 
Sbjct: 12  LRSSFFTGTALLDARKAALSSLPRSIPSIQSTRSNTYSIKTTRTLISSRRKSSSSITARS 71

Query: 200 RRFGIPXXXXXXXXXXXXXXDLESLFSERVVEDSSRNQGKKKSNTGASSVSSGVRLENIS 21
               +                +ESLFS   V++  R +  K+SN+GAS +SSG++LEN+S
Sbjct: 72  SAVAVEESAPETMTKEE----IESLFSNETVDEFDRKRDGKQSNSGASGISSGIKLENVS 127

Query: 20  KSFKGV 3
           K++KGV
Sbjct: 128 KTYKGV 133


>ref|XP_006428017.1| hypothetical protein CICLE_v10025045mg [Citrus clementina]
           gi|568884046|ref|XP_006494741.1| PREDICTED: ABC
           transporter F family member 5-like [Citrus sinensis]
           gi|557530007|gb|ESR41257.1| hypothetical protein
           CICLE_v10025045mg [Citrus clementina]
          Length = 692

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 28/45 (62%), Positives = 35/45 (77%)
 Frame = -1

Query: 137 LESLFSERVVEDSSRNQGKKKSNTGASSVSSGVRLENISKSFKGV 3
           +ESLFS    E  ++    K+SNTGASS+SSGV+LENISKS+KGV
Sbjct: 66  VESLFSSSADEFENKKYSNKQSNTGASSISSGVKLENISKSYKGV 110


Top