BLASTX nr result

ID: Zingiber25_contig00027352 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00027352
         (331 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28998.3| unnamed protein product [Vitis vinifera]               57   3e-06
ref|XP_004143701.1| PREDICTED: pentatricopeptide repeat-containi...    57   3e-06

>emb|CBI28998.3| unnamed protein product [Vitis vinifera]
          Length = 732

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 31/67 (46%), Positives = 40/67 (59%)
 Frame = +2

Query: 122 SDLFAINNQNTFAAALSFSWRNNSPVLGSRIHGQIIKSGFSADTFSQNNLLTMYSKCREV 301
           S L   N+    + AL+ S  +   +LGS+IH QIIK GF  D FSQNNL+ MY+KC  +
Sbjct: 68  SSLSFRNDPTALSTALTHSANSKCILLGSQIHAQIIKLGFCNDIFSQNNLIRMYTKCGFL 127

Query: 302 DHASKVF 322
               KVF
Sbjct: 128 AGGLKVF 134


>ref|XP_004143701.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
          Length = 759

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 28/57 (49%), Positives = 35/57 (61%)
 Frame = +2

Query: 152 TFAAALSFSWRNNSPVLGSRIHGQIIKSGFSADTFSQNNLLTMYSKCREVDHASKVF 322
           T A ALS S    S +LG+++HG + K GF  DTFS NNLL MY +C  +    KVF
Sbjct: 14  TIATALSLSENTKSLILGAQVHGHMCKLGFDYDTFSMNNLLKMYFRCGFMCEGFKVF 70


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