BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00027289
         (441 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006466768.1| PREDICTED: splicing factor U2af large subuni...   119   5e-25
ref|XP_006466767.1| PREDICTED: splicing factor U2af large subuni...   119   5e-25
ref|XP_006466765.1| PREDICTED: splicing factor U2af large subuni...   119   5e-25
ref|XP_006466764.1| PREDICTED: splicing factor U2af large subuni...   119   5e-25
ref|XP_006425715.1| hypothetical protein CICLE_v10025221mg [Citr...   119   5e-25
ref|XP_006425714.1| hypothetical protein CICLE_v10025221mg [Citr...   119   5e-25
gb|EMJ04963.1| hypothetical protein PRUPE_ppa003118mg [Prunus pe...   118   7e-25
gb|EMT00217.1| Splicing factor U2af large subunit B [Aegilops ta...   117   2e-24
gb|EMS55481.1| Splicing factor U2af large subunit B [Triticum ur...   117   2e-24
sp|Q2QKB4.1|U2A2B_WHEAT RecName: Full=Splicing factor U2af large...   117   2e-24
ref|XP_002271463.2| PREDICTED: splicing factor U2af large subuni...   117   2e-24
emb|CBI17547.3| unnamed protein product [Vitis vinifera]              117   2e-24
sp|Q9ZR40.1|U2A2B_NICPL RecName: Full=Splicing factor U2af large...   115   5e-24
ref|XP_006663107.1| PREDICTED: splicing factor U2af large subuni...   115   6e-24
emb|CAN68321.1| hypothetical protein VITISV_032193 [Vitis vinifera]   115   8e-24
ref|XP_006363146.1| PREDICTED: splicing factor U2af large subuni...   114   1e-23
ref|XP_006363145.1| PREDICTED: splicing factor U2af large subuni...   114   1e-23
ref|XP_004232384.1| PREDICTED: splicing factor U2af large subuni...   114   1e-23
gb|AAG01126.1|AF273333_11 BAC19.11 [Solanum lycopersicum]             114   1e-23
gb|ACD67872.1| U2 snRNP auxiliary factor large subunit [Solanum ...   114   1e-23

>ref|XP_006466768.1| PREDICTED: splicing factor U2af large subunit B-like isoform X6
           [Citrus sinensis]
          Length = 368

 Score =  119 bits (297), Expect = 5e-25
 Identities = 53/67 (79%), Positives = 60/67 (89%)
 Frame = +3

Query: 3   EGGKYGNLVNVIIPRPGPNGEPVPGLGKVFLEYSDVDGSTKARQALNGRKFGGNPVVATF 182
           EGGK+G LVNVIIPRP PNGEP PG+GKVFLEY+D+DG+TKAR  +NGRKFGGN VVA F
Sbjct: 296 EGGKFGTLVNVIIPRPNPNGEPSPGVGKVFLEYADIDGATKARTGMNGRKFGGNQVVAVF 355

Query: 183 YPESKFA 203
           YPE+KFA
Sbjct: 356 YPENKFA 362


>ref|XP_006466767.1| PREDICTED: splicing factor U2af large subunit B-like isoform X5
           [Citrus sinensis]
          Length = 380

 Score =  119 bits (297), Expect = 5e-25
 Identities = 53/67 (79%), Positives = 60/67 (89%)
 Frame = +3

Query: 3   EGGKYGNLVNVIIPRPGPNGEPVPGLGKVFLEYSDVDGSTKARQALNGRKFGGNPVVATF 182
           EGGK+G LVNVIIPRP PNGEP PG+GKVFLEY+D+DG+TKAR  +NGRKFGGN VVA F
Sbjct: 308 EGGKFGTLVNVIIPRPNPNGEPSPGVGKVFLEYADIDGATKARTGMNGRKFGGNQVVAVF 367

Query: 183 YPESKFA 203
           YPE+KFA
Sbjct: 368 YPENKFA 374


>ref|XP_006466765.1| PREDICTED: splicing factor U2af large subunit B-like isoform X3
           [Citrus sinensis] gi|568824768|ref|XP_006466766.1|
           PREDICTED: splicing factor U2af large subunit B-like
           isoform X4 [Citrus sinensis]
          Length = 394

 Score =  119 bits (297), Expect = 5e-25
 Identities = 53/67 (79%), Positives = 60/67 (89%)
 Frame = +3

Query: 3   EGGKYGNLVNVIIPRPGPNGEPVPGLGKVFLEYSDVDGSTKARQALNGRKFGGNPVVATF 182
           EGGK+G LVNVIIPRP PNGEP PG+GKVFLEY+D+DG+TKAR  +NGRKFGGN VVA F
Sbjct: 322 EGGKFGTLVNVIIPRPNPNGEPSPGVGKVFLEYADIDGATKARTGMNGRKFGGNQVVAVF 381

Query: 183 YPESKFA 203
           YPE+KFA
Sbjct: 382 YPENKFA 388


>ref|XP_006466764.1| PREDICTED: splicing factor U2af large subunit B-like isoform X2
           [Citrus sinensis]
          Length = 581

 Score =  119 bits (297), Expect = 5e-25
 Identities = 53/67 (79%), Positives = 60/67 (89%)
 Frame = +3

Query: 3   EGGKYGNLVNVIIPRPGPNGEPVPGLGKVFLEYSDVDGSTKARQALNGRKFGGNPVVATF 182
           EGGK+G LVNVIIPRP PNGEP PG+GKVFLEY+D+DG+TKAR  +NGRKFGGN VVA F
Sbjct: 509 EGGKFGTLVNVIIPRPNPNGEPSPGVGKVFLEYADIDGATKARTGMNGRKFGGNQVVAVF 568

Query: 183 YPESKFA 203
           YPE+KFA
Sbjct: 569 YPENKFA 575


>ref|XP_006425715.1| hypothetical protein CICLE_v10025221mg [Citrus clementina]
           gi|557527705|gb|ESR38955.1| hypothetical protein
           CICLE_v10025221mg [Citrus clementina]
          Length = 592

 Score =  119 bits (297), Expect = 5e-25
 Identities = 53/67 (79%), Positives = 60/67 (89%)
 Frame = +3

Query: 3   EGGKYGNLVNVIIPRPGPNGEPVPGLGKVFLEYSDVDGSTKARQALNGRKFGGNPVVATF 182
           EGGK+G LVNVIIPRP PNGEP PG+GKVFLEY+D+DG+TKAR  +NGRKFGGN VVA F
Sbjct: 520 EGGKFGTLVNVIIPRPNPNGEPSPGVGKVFLEYADIDGATKARTGMNGRKFGGNQVVAVF 579

Query: 183 YPESKFA 203
           YPE+KFA
Sbjct: 580 YPENKFA 586


>ref|XP_006425714.1| hypothetical protein CICLE_v10025221mg [Citrus clementina]
           gi|568824761|ref|XP_006466763.1| PREDICTED: splicing
           factor U2af large subunit B-like isoform X1 [Citrus
           sinensis] gi|557527704|gb|ESR38954.1| hypothetical
           protein CICLE_v10025221mg [Citrus clementina]
          Length = 593

 Score =  119 bits (297), Expect = 5e-25
 Identities = 53/67 (79%), Positives = 60/67 (89%)
 Frame = +3

Query: 3   EGGKYGNLVNVIIPRPGPNGEPVPGLGKVFLEYSDVDGSTKARQALNGRKFGGNPVVATF 182
           EGGK+G LVNVIIPRP PNGEP PG+GKVFLEY+D+DG+TKAR  +NGRKFGGN VVA F
Sbjct: 521 EGGKFGTLVNVIIPRPNPNGEPSPGVGKVFLEYADIDGATKARTGMNGRKFGGNQVVAVF 580

Query: 183 YPESKFA 203
           YPE+KFA
Sbjct: 581 YPENKFA 587


>gb|EMJ04963.1| hypothetical protein PRUPE_ppa003118mg [Prunus persica]
          Length = 601

 Score =  118 bits (296), Expect = 7e-25
 Identities = 55/67 (82%), Positives = 60/67 (89%)
 Frame = +3

Query: 3   EGGKYGNLVNVIIPRPGPNGEPVPGLGKVFLEYSDVDGSTKARQALNGRKFGGNPVVATF 182
           EGGK+G LVNVIIPRP P+GEP+PG+GKVFLEY+DVDGSTKAR  LNGRKFGGN VVA F
Sbjct: 529 EGGKFGPLVNVIIPRPRPDGEPLPGVGKVFLEYADVDGSTKARTGLNGRKFGGNQVVAVF 588

Query: 183 YPESKFA 203
           YPE KFA
Sbjct: 589 YPEDKFA 595


>gb|EMT00217.1| Splicing factor U2af large subunit B [Aegilops tauschii]
          Length = 543

 Score =  117 bits (293), Expect = 2e-24
 Identities = 53/67 (79%), Positives = 61/67 (91%)
 Frame = +3

Query: 3   EGGKYGNLVNVIIPRPGPNGEPVPGLGKVFLEYSDVDGSTKARQALNGRKFGGNPVVATF 182
           E GKYGNLV V+IPRP P+GEPV G+GKVFLEY+DVDGSTKA+ A++GRKFGGNPVVA F
Sbjct: 469 EAGKYGNLVKVVIPRPHPSGEPVSGVGKVFLEYADVDGSTKAKTAMHGRKFGGNPVVAVF 528

Query: 183 YPESKFA 203
           YPE+KFA
Sbjct: 529 YPENKFA 535


>gb|EMS55481.1| Splicing factor U2af large subunit B [Triticum urartu]
          Length = 598

 Score =  117 bits (293), Expect = 2e-24
 Identities = 53/67 (79%), Positives = 61/67 (91%)
 Frame = +3

Query: 3   EGGKYGNLVNVIIPRPGPNGEPVPGLGKVFLEYSDVDGSTKARQALNGRKFGGNPVVATF 182
           E GKYGNLV V+IPRP P+GEPV G+GKVFLEY+DVDGSTKA+ A++GRKFGGNPVVA F
Sbjct: 524 EAGKYGNLVKVVIPRPHPSGEPVSGVGKVFLEYADVDGSTKAKTAMHGRKFGGNPVVAVF 583

Query: 183 YPESKFA 203
           YPE+KFA
Sbjct: 584 YPENKFA 590


>sp|Q2QKB4.1|U2A2B_WHEAT RecName: Full=Splicing factor U2af large subunit B; AltName:
           Full=U2 auxiliary factor 65 kDa subunit B; AltName:
           Full=U2 small nuclear ribonucleoprotein auxiliary factor
           large subunit B; Short=U2 snRNP auxiliary factor large
           subunit B gi|68036764|gb|AAY84880.1| U2AF large subunit
           [Triticum aestivum]
          Length = 543

 Score =  117 bits (293), Expect = 2e-24
 Identities = 53/67 (79%), Positives = 61/67 (91%)
 Frame = +3

Query: 3   EGGKYGNLVNVIIPRPGPNGEPVPGLGKVFLEYSDVDGSTKARQALNGRKFGGNPVVATF 182
           E GKYGNLV V+IPRP P+GEPV G+GKVFLEY+DVDGSTKA+ A++GRKFGGNPVVA F
Sbjct: 469 EAGKYGNLVKVVIPRPHPSGEPVSGVGKVFLEYADVDGSTKAKTAMHGRKFGGNPVVAVF 528

Query: 183 YPESKFA 203
           YPE+KFA
Sbjct: 529 YPENKFA 535


>ref|XP_002271463.2| PREDICTED: splicing factor U2af large subunit B-like [Vitis
           vinifera]
          Length = 568

 Score =  117 bits (293), Expect = 2e-24
 Identities = 53/67 (79%), Positives = 59/67 (88%)
 Frame = +3

Query: 3   EGGKYGNLVNVIIPRPGPNGEPVPGLGKVFLEYSDVDGSTKARQALNGRKFGGNPVVATF 182
           EGGK+GNLVNV IPRP PNGEP PGLGKVFLEY+D+DG+TKAR  LNGRKF GN VVA F
Sbjct: 496 EGGKFGNLVNVAIPRPKPNGEPTPGLGKVFLEYADIDGATKARTGLNGRKFDGNQVVAVF 555

Query: 183 YPESKFA 203
           YPE+KF+
Sbjct: 556 YPENKFS 562


>emb|CBI17547.3| unnamed protein product [Vitis vinifera]
          Length = 393

 Score =  117 bits (293), Expect = 2e-24
 Identities = 53/67 (79%), Positives = 59/67 (88%)
 Frame = +3

Query: 3   EGGKYGNLVNVIIPRPGPNGEPVPGLGKVFLEYSDVDGSTKARQALNGRKFGGNPVVATF 182
           EGGK+GNLVNV IPRP PNGEP PGLGKVFLEY+D+DG+TKAR  LNGRKF GN VVA F
Sbjct: 321 EGGKFGNLVNVAIPRPKPNGEPTPGLGKVFLEYADIDGATKARTGLNGRKFDGNQVVAVF 380

Query: 183 YPESKFA 203
           YPE+KF+
Sbjct: 381 YPENKFS 387


>sp|Q9ZR40.1|U2A2B_NICPL RecName: Full=Splicing factor U2af large subunit B; AltName:
           Full=NpU2AF65b; AltName: Full=U2 auxiliary factor 65 kDa
           subunit B; AltName: Full=U2 small nuclear
           ribonucleoprotein auxiliary factor large subunit B;
           Short=U2 snRNP auxiliary factor large subunit B
           gi|3850821|emb|CAA77135.1| U2 snRNP auxiliary factor,
           large subunit [Nicotiana plumbaginifolia]
          Length = 573

 Score =  115 bits (289), Expect = 5e-24
 Identities = 52/66 (78%), Positives = 60/66 (90%)
 Frame = +3

Query: 3   EGGKYGNLVNVIIPRPGPNGEPVPGLGKVFLEYSDVDGSTKARQALNGRKFGGNPVVATF 182
           E GK+G+LVNV+IPRP PNGEP PG+GKVFLEY+DVD S+KARQ+LNGRKFGGN VVA F
Sbjct: 501 ECGKFGSLVNVVIPRPSPNGEPTPGVGKVFLEYADVDSSSKARQSLNGRKFGGNQVVAVF 560

Query: 183 YPESKF 200
           YPE+KF
Sbjct: 561 YPENKF 566


>ref|XP_006663107.1| PREDICTED: splicing factor U2af large subunit B-like [Oryza
           brachyantha]
          Length = 567

 Score =  115 bits (288), Expect = 6e-24
 Identities = 51/67 (76%), Positives = 61/67 (91%)
 Frame = +3

Query: 3   EGGKYGNLVNVIIPRPGPNGEPVPGLGKVFLEYSDVDGSTKARQALNGRKFGGNPVVATF 182
           E GKYGNLV V+IPRP P+G+PV G+GKVFLEY+DVDG+TKA+ A++GRKFGGNPVVA F
Sbjct: 494 EAGKYGNLVKVVIPRPDPSGQPVAGVGKVFLEYADVDGATKAKTAMHGRKFGGNPVVAVF 553

Query: 183 YPESKFA 203
           YPE+KFA
Sbjct: 554 YPENKFA 560


>emb|CAN68321.1| hypothetical protein VITISV_032193 [Vitis vinifera]
          Length = 565

 Score =  115 bits (287), Expect = 8e-24
 Identities = 52/67 (77%), Positives = 58/67 (86%)
 Frame = +3

Query: 3   EGGKYGNLVNVIIPRPGPNGEPVPGLGKVFLEYSDVDGSTKARQALNGRKFGGNPVVATF 182
           EGGK+GNLVNV IPRP PNGEP PGLGKVFLEY+D+DG+ KAR  LNGRKF GN VVA F
Sbjct: 493 EGGKFGNLVNVAIPRPKPNGEPTPGLGKVFLEYADIDGAXKARTGLNGRKFDGNQVVAVF 552

Query: 183 YPESKFA 203
           YPE+KF+
Sbjct: 553 YPENKFS 559


>ref|XP_006363146.1| PREDICTED: splicing factor U2af large subunit A-like isoform X2
           [Solanum tuberosum]
          Length = 367

 Score =  114 bits (286), Expect = 1e-23
 Identities = 52/67 (77%), Positives = 59/67 (88%)
 Frame = +3

Query: 3   EGGKYGNLVNVIIPRPGPNGEPVPGLGKVFLEYSDVDGSTKARQALNGRKFGGNPVVATF 182
           E GK+G L+NV+IPRP PNGEP PGLGKVFLEY+DVD S+KARQ LNGRKFGGN VVA F
Sbjct: 295 ECGKFGALLNVVIPRPNPNGEPTPGLGKVFLEYADVDSSSKARQGLNGRKFGGNQVVAVF 354

Query: 183 YPESKFA 203
           YPE+KF+
Sbjct: 355 YPENKFS 361


>ref|XP_006363145.1| PREDICTED: splicing factor U2af large subunit A-like isoform X1
           [Solanum tuberosum]
          Length = 556

 Score =  114 bits (286), Expect = 1e-23
 Identities = 52/67 (77%), Positives = 59/67 (88%)
 Frame = +3

Query: 3   EGGKYGNLVNVIIPRPGPNGEPVPGLGKVFLEYSDVDGSTKARQALNGRKFGGNPVVATF 182
           E GK+G L+NV+IPRP PNGEP PGLGKVFLEY+DVD S+KARQ LNGRKFGGN VVA F
Sbjct: 484 ECGKFGALLNVVIPRPNPNGEPTPGLGKVFLEYADVDSSSKARQGLNGRKFGGNQVVAVF 543

Query: 183 YPESKFA 203
           YPE+KF+
Sbjct: 544 YPENKFS 550


>ref|XP_004232384.1| PREDICTED: splicing factor U2af large subunit A-like [Solanum
           lycopersicum]
          Length = 558

 Score =  114 bits (285), Expect = 1e-23
 Identities = 51/67 (76%), Positives = 59/67 (88%)
 Frame = +3

Query: 3   EGGKYGNLVNVIIPRPGPNGEPVPGLGKVFLEYSDVDGSTKARQALNGRKFGGNPVVATF 182
           E GK+G L+NV+IPRP PNGEP PGLGKVFLEY+DVD S+KARQ LNGRKFGGN V+A F
Sbjct: 486 ECGKFGALLNVVIPRPNPNGEPTPGLGKVFLEYADVDSSSKARQGLNGRKFGGNQVIAVF 545

Query: 183 YPESKFA 203
           YPE+KF+
Sbjct: 546 YPENKFS 552


>gb|AAG01126.1|AF273333_11 BAC19.11 [Solanum lycopersicum]
          Length = 532

 Score =  114 bits (285), Expect = 1e-23
 Identities = 51/67 (76%), Positives = 59/67 (88%)
 Frame = +3

Query: 3   EGGKYGNLVNVIIPRPGPNGEPVPGLGKVFLEYSDVDGSTKARQALNGRKFGGNPVVATF 182
           E GK+G L+NV+IPRP PNGEP PGLGKVFLEY+DVD S+KARQ LNGRKFGGN V+A F
Sbjct: 460 ECGKFGALLNVVIPRPNPNGEPTPGLGKVFLEYADVDSSSKARQGLNGRKFGGNQVIAVF 519

Query: 183 YPESKFA 203
           YPE+KF+
Sbjct: 520 YPENKFS 526


>gb|ACD67872.1| U2 snRNP auxiliary factor large subunit [Solanum melongena]
          Length = 554

 Score =  114 bits (285), Expect = 1e-23
 Identities = 51/67 (76%), Positives = 59/67 (88%)
 Frame = +3

Query: 3   EGGKYGNLVNVIIPRPGPNGEPVPGLGKVFLEYSDVDGSTKARQALNGRKFGGNPVVATF 182
           E GK+G L+NV+IPRP PNGEP PGLGKVFLEY+DVD S+KARQ LNGRKFGGN V+A F
Sbjct: 480 ECGKFGALLNVVIPRPNPNGEPTPGLGKVFLEYADVDSSSKARQGLNGRKFGGNQVIAVF 539

Query: 183 YPESKFA 203
           YPE+KF+
Sbjct: 540 YPENKFS 546