BLASTX nr result
ID: Zingiber25_contig00027153
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00027153
(1037 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006850709.1| hypothetical protein AMTR_s00025p00023010 [A... 155 2e-35
ref|XP_002275560.2| PREDICTED: 5'-3' exoribonuclease 4-like [Vit... 153 1e-34
emb|CBI26575.3| unnamed protein product [Vitis vinifera] 153 1e-34
ref|XP_006375953.1| hypothetical protein POPTR_0013s06730g [Popu... 139 1e-30
ref|XP_006375952.1| hypothetical protein POPTR_0013s06730g [Popu... 139 1e-30
ref|XP_002519992.1| 5'->3' exoribonuclease, putative [Ricinus co... 126 1e-26
gb|EXB64360.1| 5'-3' exoribonuclease 4 [Morus notabilis] 124 5e-26
ref|XP_006301240.1| hypothetical protein CARUB_v10021640mg [Caps... 115 2e-23
ref|XP_004302012.1| PREDICTED: 5'-3' exoribonuclease 4-like [Fra... 115 4e-23
ref|NP_175851.1| 5'-3' exoribonuclease 4 [Arabidopsis thaliana] ... 114 8e-23
ref|XP_003626390.1| 5'-3' exoribonuclease [Medicago truncatula] ... 112 2e-22
ref|XP_006826276.1| hypothetical protein AMTR_s00004p00046450 [A... 111 4e-22
ref|XP_006606480.1| PREDICTED: 5'-3' exoribonuclease 4-like isof... 111 4e-22
ref|XP_006392535.1| hypothetical protein EUTSA_v10023239mg [Eutr... 110 7e-22
ref|XP_004156447.1| PREDICTED: 5'-3' exoribonuclease 4-like, par... 110 1e-21
ref|XP_004139217.1| PREDICTED: 5'-3' exoribonuclease 4-like [Cuc... 110 1e-21
gb|ADN33909.1| 5'-3' exoribonuclease [Cucumis melo subsp. melo] 110 1e-21
ref|XP_002512252.1| 5'->3' exoribonuclease, putative [Ricinus co... 110 1e-21
ref|XP_006382752.1| 5'-3' exoribonuclease family protein [Populu... 108 3e-21
ref|XP_002328516.1| predicted protein [Populus trichocarpa] 108 3e-21
>ref|XP_006850709.1| hypothetical protein AMTR_s00025p00023010 [Amborella trichopoda]
gi|548854380|gb|ERN12290.1| hypothetical protein
AMTR_s00025p00023010 [Amborella trichopoda]
Length = 770
Score = 155 bits (392), Expect = 2e-35
Identities = 79/196 (40%), Positives = 124/196 (63%), Gaps = 1/196 (0%)
Frame = +3
Query: 3 LTEEEKQRNSWTMDVLFVHFSHPLTSKILSFYQRKKDNPKLGKAKLKKRIDPEISNGMNG 182
L +EEKQRNS +++LFVH SHPL +ILS Y+R + P+L +A +K++ID +IS+GMNG
Sbjct: 203 LMDEEKQRNSVGIEILFVHTSHPLAMEILSLYRRDLNYPRLPEASVKEKIDFKISDGMNG 262
Query: 183 LIYISDKTMFSFEIYSPVEGMEAITQNKTISTYFKAPSIQTHIARLPDGITLPNKSISKK 362
+YISDK + I +PVEGME I ++ IS +++ P + H+ RLP+G+ +P K ++K+
Sbjct: 263 YVYISDKVVCPPLIAAPVEGMENIAGSQVISVFYELPCVHAHVPRLPEGVIIPKKLVTKR 322
Query: 363 HIPPVPGLWHETLISKRQAHLNRPIPHAIEGHLLLKLAHKLVTNYYGEKMKQDSVRLDKK 542
+ LWHE + L RP+P+++ G L +LAH+LV +Y + ++ + K
Sbjct: 323 DLTLARVLWHEDSALHGRVTLKRPVPNSVSGAYLGRLAHQLVKKFYKHQERESVTPANLK 382
Query: 543 -AFDDKCNKKLKELTT 587
AF + KE+ T
Sbjct: 383 FAFSNVFGGLSKEMCT 398
>ref|XP_002275560.2| PREDICTED: 5'-3' exoribonuclease 4-like [Vitis vinifera]
Length = 834
Score = 153 bits (386), Expect = 1e-34
Identities = 72/132 (54%), Positives = 93/132 (70%)
Frame = +3
Query: 3 LTEEEKQRNSWTMDVLFVHFSHPLTSKILSFYQRKKDNPKLGKAKLKKRIDPEISNGMNG 182
LT++EK RN MD LF+H S PL KI SFY+RKKD+PKL AK+K++IDP+ S GMNG
Sbjct: 645 LTDKEKLRNRLGMDALFIHISDPLAVKIFSFYKRKKDHPKLPMAKVKRKIDPKFSGGMNG 704
Query: 183 LIYISDKTMFSFEIYSPVEGMEAITQNKTISTYFKAPSIQTHIARLPDGITLPNKSISKK 362
+YISD+ ++ E YSP+E ME I QNK IS ++K PS HI R +G+ LP K++ K
Sbjct: 705 YMYISDRPVWPAEFYSPIEDMEMIAQNKVISIFYKCPSFHPHIPRPLEGVILPGKTVIKP 764
Query: 363 HIPPVPGLWHET 398
H+ P LWHET
Sbjct: 765 HLLRPPVLWHET 776
>emb|CBI26575.3| unnamed protein product [Vitis vinifera]
Length = 845
Score = 153 bits (386), Expect = 1e-34
Identities = 72/132 (54%), Positives = 93/132 (70%)
Frame = +3
Query: 3 LTEEEKQRNSWTMDVLFVHFSHPLTSKILSFYQRKKDNPKLGKAKLKKRIDPEISNGMNG 182
LT++EK RN MD LF+H S PL KI SFY+RKKD+PKL AK+K++IDP+ S GMNG
Sbjct: 626 LTDKEKLRNRLGMDALFIHISDPLAVKIFSFYKRKKDHPKLPMAKVKRKIDPKFSGGMNG 685
Query: 183 LIYISDKTMFSFEIYSPVEGMEAITQNKTISTYFKAPSIQTHIARLPDGITLPNKSISKK 362
+YISD+ ++ E YSP+E ME I QNK IS ++K PS HI R +G+ LP K++ K
Sbjct: 686 YMYISDRPVWPAEFYSPIEDMEMIAQNKVISIFYKCPSFHPHIPRPLEGVILPGKTVIKP 745
Query: 363 HIPPVPGLWHET 398
H+ P LWHET
Sbjct: 746 HLLRPPVLWHET 757
>ref|XP_006375953.1| hypothetical protein POPTR_0013s06730g [Populus trichocarpa]
gi|550325137|gb|ERP53750.1| hypothetical protein
POPTR_0013s06730g [Populus trichocarpa]
Length = 825
Score = 139 bits (351), Expect = 1e-30
Identities = 75/169 (44%), Positives = 104/169 (61%)
Frame = +3
Query: 3 LTEEEKQRNSWTMDVLFVHFSHPLTSKILSFYQRKKDNPKLGKAKLKKRIDPEISNGMNG 182
LT+EE++RN DVL VH SHPL K++S ++ K D A K +IDP+IS GMNG
Sbjct: 236 LTDEERRRNRLGYDVLCVHVSHPLAVKVISLFECK-DQSAQPTANGKLKIDPKISGGMNG 294
Query: 183 LIYISDKTMFSFEIYSPVEGMEAITQNKTISTYFKAPSIQTHIARLPDGITLPNKSISKK 362
IYIS+K + I+SP++GM I + IS +++ P +HI RLP+G+ LPNKS++K
Sbjct: 295 YIYISEKPEWPLGIFSPIDGMLMIASEQVISVFYEYPPFHSHIPRLPEGVILPNKSVTKC 354
Query: 363 HIPPVPGLWHETLISKRQAHLNRPIPHAIEGHLLLKLAHKLVTNYYGEK 509
+I LWHE I + R IP +I G L +LAH+LV+ Y K
Sbjct: 355 NILHAHHLWHEPAIPSISS--KRQIPKSISGPQLAELAHRLVSEYSSSK 401
>ref|XP_006375952.1| hypothetical protein POPTR_0013s06730g [Populus trichocarpa]
gi|550325136|gb|ERP53749.1| hypothetical protein
POPTR_0013s06730g [Populus trichocarpa]
Length = 788
Score = 139 bits (351), Expect = 1e-30
Identities = 75/169 (44%), Positives = 104/169 (61%)
Frame = +3
Query: 3 LTEEEKQRNSWTMDVLFVHFSHPLTSKILSFYQRKKDNPKLGKAKLKKRIDPEISNGMNG 182
LT+EE++RN DVL VH SHPL K++S ++ K D A K +IDP+IS GMNG
Sbjct: 236 LTDEERRRNRLGYDVLCVHVSHPLAVKVISLFECK-DQSAQPTANGKLKIDPKISGGMNG 294
Query: 183 LIYISDKTMFSFEIYSPVEGMEAITQNKTISTYFKAPSIQTHIARLPDGITLPNKSISKK 362
IYIS+K + I+SP++GM I + IS +++ P +HI RLP+G+ LPNKS++K
Sbjct: 295 YIYISEKPEWPLGIFSPIDGMLMIASEQVISVFYEYPPFHSHIPRLPEGVILPNKSVTKC 354
Query: 363 HIPPVPGLWHETLISKRQAHLNRPIPHAIEGHLLLKLAHKLVTNYYGEK 509
+I LWHE I + R IP +I G L +LAH+LV+ Y K
Sbjct: 355 NILHAHHLWHEPAIPSISS--KRQIPKSISGPQLAELAHRLVSEYSSSK 401
>ref|XP_002519992.1| 5'->3' exoribonuclease, putative [Ricinus communis]
gi|223540756|gb|EEF42316.1| 5'->3' exoribonuclease,
putative [Ricinus communis]
Length = 1545
Score = 126 bits (317), Expect = 1e-26
Identities = 76/209 (36%), Positives = 115/209 (55%)
Frame = +3
Query: 3 LTEEEKQRNSWTMDVLFVHFSHPLTSKILSFYQRKKDNPKLGKAKLKKRIDPEISNGMNG 182
LT++E++RNS + LFVH SHPL I+ F+++ +D L K IDPE+S GMNG
Sbjct: 626 LTDDERRRNSLGSNFLFVHISHPLADMIIYFFKQNRDPNVLLK------IDPELSGGMNG 679
Query: 183 LIYISDKTMFSFEIYSPVEGMEAITQNKTISTYFKAPSIQTHIARLPDGITLPNKSISKK 362
+YISD + E+ SPV+GM I N+ IS ++ P HI+RLP G+ LP K IS
Sbjct: 680 FVYISDNAVCPEEVSSPVDGMRMIAHNRVISVSYRYPLFHYHISRLPQGVILPGKDIS-- 737
Query: 363 HIPPVPGLWHETLISKRQAHLNRPIPHAIEGHLLLKLAHKLVTNYYGEKMKQDSVRLDKK 542
P L HE ++ + RPIP ++ G L LAH+LV++ K +
Sbjct: 738 -----PLLQHEKVVPAGVSS-RRPIPRSVSGTHLANLAHRLVSSCTPIKQDDNLGYKGPN 791
Query: 543 AFDDKCNKKLKELTTTISILGKRKCRSQE 629
D CN ++TT++ +++ R+++
Sbjct: 792 ILVDTCN--WGGISTTLNSRKRKRSRNKK 818
>gb|EXB64360.1| 5'-3' exoribonuclease 4 [Morus notabilis]
Length = 1572
Score = 124 bits (312), Expect = 5e-26
Identities = 68/178 (38%), Positives = 104/178 (58%)
Frame = +3
Query: 3 LTEEEKQRNSWTMDVLFVHFSHPLTSKILSFYQRKKDNPKLGKAKLKKRIDPEISNGMNG 182
LT+EE++RN +DVLFVH SH + ++ F QR + A++K++I+P+ S GMNG
Sbjct: 594 LTDEERRRNRLGLDVLFVHSSHSFSESLVLFSQRNEL-----VAQVKEKINPKFSAGMNG 648
Query: 183 LIYISDKTMFSFEIYSPVEGMEAITQNKTISTYFKAPSIQTHIARLPDGITLPNKSISKK 362
++I DKT+ +I SP++GME I NK +S ++ P HI R P+ + P+K I KK
Sbjct: 649 YMFIPDKTVKPEQIDSPIDGMEMIANNKVLSLFYDNPRFLGHIPRPPEKVAWPSKCICKK 708
Query: 363 HIPPVPGLWHETLISKRQAHLNRPIPHAIEGHLLLKLAHKLVTNYYGEKMKQDSVRLD 536
I P P LWHE + H PI +++ G L K A +LV + E ++ + L+
Sbjct: 709 DIKPKPFLWHEQTAVVGRLHSLMPIRNSVSGSHLAKSARQLVLTWCLEMQQKSTGSLE 766
>ref|XP_006301240.1| hypothetical protein CARUB_v10021640mg [Capsella rubella]
gi|482569950|gb|EOA34138.1| hypothetical protein
CARUB_v10021640mg [Capsella rubella]
Length = 948
Score = 115 bits (289), Expect = 2e-23
Identities = 64/175 (36%), Positives = 98/175 (56%), Gaps = 1/175 (0%)
Frame = +3
Query: 3 LTEEEKQRNSWTMDVLFVHFSHPLTSKILSFYQRKKDNPKLGKAKLKKRIDPEISNGMNG 182
LT EE+QRNS +D+L+VH +HPL +IL +Y + P + IDP S GMNG
Sbjct: 598 LTVEERQRNSVMLDLLYVHPAHPLGQRILQYYHFYQHLPP--HEFIPWTIDPNSSQGMNG 655
Query: 183 LIYISDKTMFSFEIYSPVEGMEAITQNKTISTYFKAPSIQTHIARLPDGITLPNKSISKK 362
++IS++ F + SPV G+ I QN+ ++ + P+ +HI+ P G +P+K ++
Sbjct: 656 FLWISERNGFQTRVDSPVNGLPCIEQNRALNVTYLCPAKHSHISEPPRGAIIPDKILTSV 715
Query: 363 HIPPVPGLWHETLISKRQAHLNRP-IPHAIEGHLLLKLAHKLVTNYYGEKMKQDS 524
I P P LWHE ++R+ +RP + AI G L + AH+L+ N K S
Sbjct: 716 DIKPFPPLWHEDNSNRRRQSRDRPQVAGAIAGPSLGEAAHRLIKNTLNMKSSTGS 770
>ref|XP_004302012.1| PREDICTED: 5'-3' exoribonuclease 4-like [Fragaria vesca subsp. vesca]
Length = 971
Score = 115 bits (287), Expect = 4e-23
Identities = 67/165 (40%), Positives = 92/165 (55%), Gaps = 1/165 (0%)
Frame = +3
Query: 3 LTEEEKQRNSWTMDVLFVHFSHPLTSKILSFYQRKKDNPKLGKAKLKKRIDPEISNGMNG 182
LTEEE RNS +D+LFV+ SHPL S I +YQ +P +L ID +S GMNG
Sbjct: 598 LTEEELARNSVMLDLLFVYPSHPLASHITLYYQVYCQSPP--HVRLPWVIDTSLSGGMNG 655
Query: 183 LIYISDKTMFSFEIYSPVEGMEAITQNKTISTYFKAPSIQTHIARLPDGITLPNKSISKK 362
+++S++ F I SPV G I N+ ++ + P Q HI P G+ +P K +
Sbjct: 656 FLWLSERNGFRNVIPSPVRGFPNIDHNQVLNVTYLLPVAQKHIPEPPRGVIMPRKVVKPM 715
Query: 363 HIPPVPGLWHETLISKRQAHLNRP-IPHAIEGHLLLKLAHKLVTN 494
I P P LWHE +R + +RP IP AI G +L + AH+LV N
Sbjct: 716 DIKPPPALWHEDNGPRRYQNRDRPQIPGAIAGPMLGEAAHRLVKN 760
>ref|NP_175851.1| 5'-3' exoribonuclease 4 [Arabidopsis thaliana]
gi|75262833|sp|Q9FQ04.1|XRN4_ARATH RecName: Full=5'-3'
exoribonuclease 4; AltName: Full=Protein ACC INSENSITIVE
1; AltName: Full=Protein ETHYLENE INSENSITIVE 5; AltName:
Full=Protein EXORIBONUCLEASE 4
gi|11875626|gb|AAG40731.1|AF286718_1 XRN4 [Arabidopsis
thaliana] gi|17381112|gb|AAL36368.1| putative exonuclease
[Arabidopsis thaliana] gi|20259665|gb|AAM14350.1|
putative exonuclease [Arabidopsis thaliana]
gi|109627646|gb|ABG34298.1| At1g54490 [Arabidopsis
thaliana] gi|332194988|gb|AEE33109.1| 5'-3'
exoribonuclease 4 [Arabidopsis thaliana]
Length = 947
Score = 114 bits (284), Expect = 8e-23
Identities = 62/165 (37%), Positives = 95/165 (57%), Gaps = 1/165 (0%)
Frame = +3
Query: 3 LTEEEKQRNSWTMDVLFVHFSHPLTSKILSFYQRKKDNPKLGKAKLKKRIDPEISNGMNG 182
LT EE+QRNS +D+L+VH +HPL +IL +Y + P L IDP S GMNG
Sbjct: 598 LTVEEQQRNSVMLDLLYVHPAHPLGQRILQYYHFYQHMPP--HECLPWMIDPNSSQGMNG 655
Query: 183 LIYISDKTMFSFEIYSPVEGMEAITQNKTISTYFKAPSIQTHIARLPDGITLPNKSISKK 362
++ S++ F + SPV G+ I QN+ ++ + P+ +HI+ P G +P+K ++
Sbjct: 656 FLWFSERNGFQTRVDSPVNGLPCIEQNRALNVTYLCPAKHSHISEPPRGAIIPDKILTSV 715
Query: 363 HIPPVPGLWHETLISKRQAHLNRP-IPHAIEGHLLLKLAHKLVTN 494
I P P LWHE ++R+ +RP + AI G L + AH+L+ N
Sbjct: 716 DIKPFPPLWHEDNSNRRRQARDRPQVVGAIAGPSLGEAAHRLIKN 760
>ref|XP_003626390.1| 5'-3' exoribonuclease [Medicago truncatula]
gi|355501405|gb|AES82608.1| 5'-3' exoribonuclease
[Medicago truncatula]
Length = 956
Score = 112 bits (280), Expect = 2e-22
Identities = 60/164 (36%), Positives = 92/164 (56%)
Frame = +3
Query: 3 LTEEEKQRNSWTMDVLFVHFSHPLTSKILSFYQRKKDNPKLGKAKLKKRIDPEISNGMNG 182
LTEEE+ RNS +D+L+V +H L IL +YQ P + L IDP S+GMNG
Sbjct: 601 LTEEEQLRNSKMLDLLYVSRAHKLVPHILFYYQNYSHLPHQQRPVLP--IDPSASDGMNG 658
Query: 183 LIYISDKTMFSFEIYSPVEGMEAITQNKTISTYFKAPSIQTHIARLPDGITLPNKSISKK 362
++ ++ +F + SP++G++ I N+ ++ + P HI + PDG+ +P K +
Sbjct: 659 FLWSYERNVFRTVVSSPIKGLQDIACNQVLNITYLNPRTHRHIPKPPDGVVMPQKILRAL 718
Query: 363 HIPPVPGLWHETLISKRQAHLNRPIPHAIEGHLLLKLAHKLVTN 494
I P+P LWHE + QA + +P AI G L + AH+LV N
Sbjct: 719 DIKPLPVLWHEDNSRRHQARERQQVPGAIAGPQLGEAAHRLVRN 762
>ref|XP_006826276.1| hypothetical protein AMTR_s00004p00046450 [Amborella trichopoda]
gi|548830590|gb|ERM93513.1| hypothetical protein
AMTR_s00004p00046450 [Amborella trichopoda]
Length = 936
Score = 111 bits (278), Expect = 4e-22
Identities = 62/165 (37%), Positives = 95/165 (57%), Gaps = 1/165 (0%)
Frame = +3
Query: 3 LTEEEKQRNSWTMDVLFVHFSHPLTSKILSFYQRKKDNPKLGKAKLKKRIDPEISNGMNG 182
LTEEE+ RNS D+LFV HPL +I Y P +G A+ +IDP S GMNG
Sbjct: 604 LTEEERIRNSIMYDLLFVSHLHPLAVQISPLYYMLYHVP-IG-ARPAYQIDPNYSGGMNG 661
Query: 183 LIYISDKTMFSFEIYSPVEGMEAITQNKTISTYFKAPSIQTHIARLPDGITLPNKSISKK 362
+++ ++ +F I SP++G+ + +N+ ++ + +P HI P+G+ +P K ++ +
Sbjct: 662 YLWLCERNVFREFIVSPIKGLRNVERNQVVNATYFSPPPHKHIPEPPEGVRMPEKFLTPQ 721
Query: 363 HIPPVPGLWHETLISKRQAHLNRP-IPHAIEGHLLLKLAHKLVTN 494
I P P LWHE S+RQ RP +P AI G LL + H+L+ N
Sbjct: 722 DIKPFPVLWHEDNSSRRQQVRERPQVPRAISGPLLGEAVHRLLKN 766
>ref|XP_006606480.1| PREDICTED: 5'-3' exoribonuclease 4-like isoform X2 [Glycine max]
Length = 931
Score = 111 bits (278), Expect = 4e-22
Identities = 65/175 (37%), Positives = 95/175 (54%), Gaps = 1/175 (0%)
Frame = +3
Query: 3 LTEEEKQRNSWTMDVLFVHFSHPLTSKILSFYQRKKDNPKLGKAKLKKRIDPEISNGMNG 182
LTEEE+ RNS +D+L+V+ +H L + ILS+Y P + + ID S GMNG
Sbjct: 596 LTEEEQLRNSVMLDLLYVNRAHNLAAHILSYYHVCSQLPP--HERCVQPIDTNASGGMNG 653
Query: 183 LIYISDKTMFSFEIYSPVEGMEAITQNKTISTYFKAPSIQTHIARLPDGITLPNKSISKK 362
+++ ++ +FS I SP+ G++ I N+ ++ F P HI + PDG+ +P K +
Sbjct: 654 YLWLCERNVFSSVISSPISGLQDIEYNQVLNITFLNPRRHDHIPKPPDGVVIPKKVLKAI 713
Query: 363 HIPPVPGLWHETLISKRQAHLNR-PIPHAIEGHLLLKLAHKLVTNYYGEKMKQDS 524
I P P LWHE I +RQ R +P AI G L + AH+LV N K S
Sbjct: 714 DIKPFPVLWHEDNIGQRQQARERLQVPGAIAGSQLGEAAHRLVKNTLNIKSNNTS 768
>ref|XP_006392535.1| hypothetical protein EUTSA_v10023239mg [Eutrema salsugineum]
gi|557089041|gb|ESQ29821.1| hypothetical protein
EUTSA_v10023239mg [Eutrema salsugineum]
Length = 946
Score = 110 bits (276), Expect = 7e-22
Identities = 63/186 (33%), Positives = 102/186 (54%), Gaps = 3/186 (1%)
Frame = +3
Query: 3 LTEEEKQRNSWTMDVLFVHFSHPLTSKILSFYQRKKDNPKLGKAKLKKRIDPEISNGMNG 182
LT EE+QRNS +D+L+VH +HPL +++ +YQ + L IDP S MNG
Sbjct: 597 LTVEERQRNSVMLDLLYVHPAHPLGQRVMQYYQFYRQLAP--HECLPWMIDPNSSQAMNG 654
Query: 183 LIYISDKTMFSFEIYSPVEGMEAITQNKTISTYFKAPSIQTHIARLPDGITLPNKSISKK 362
++ S++ F ++ SPV + +I QN+ ++ + P+ +HI P G +P+K ++
Sbjct: 655 FLWFSERNGFQTKVVSPVNDLPSIEQNRALNVTYLNPAKHSHIPEPPRGAIIPDKILTSA 714
Query: 363 HIPPVPGLWHETLISKRQAHLNRP-IPHAIEGHLLLKLAHKLVTNYYGEKMKQDSVR--L 533
I P P LWHE ++R+ +RP + AI G +L + AH+L+ N K S L
Sbjct: 715 DIKPFPPLWHEDNSNRRRQARDRPQVAGAIAGPMLGEAAHRLIKNTLNMKSSSGSASGLL 774
Query: 534 DKKAFD 551
D A++
Sbjct: 775 DPYAYN 780
>ref|XP_004156447.1| PREDICTED: 5'-3' exoribonuclease 4-like, partial [Cucumis sativus]
Length = 685
Score = 110 bits (274), Expect = 1e-21
Identities = 61/165 (36%), Positives = 91/165 (55%), Gaps = 1/165 (0%)
Frame = +3
Query: 3 LTEEEKQRNSWTMDVLFVHFSHPLTSKILSFYQRKKDNPKLGKAKLKKRIDPEISNGMNG 182
LT+EEK RNS +D+L+ H +HPL+++I S+YQ P A+ ID S GMNG
Sbjct: 322 LTDEEKNRNSVMLDMLYTHCTHPLSAQIFSYYQVASQLPP--HARTCWVIDTNASGGMNG 379
Query: 183 LIYISDKTMFSFEIYSPVEGMEAITQNKTISTYFKAPSIQTHIARLPDGITLPNKSISKK 362
+++ ++ + + SP+ + I N+ ++ + P HI P G +P K +S
Sbjct: 380 YLWLCERNVIRNVVQSPINSLPDIQCNQVLNVTYLNPQKHKHIPEPPKGAIIPKKVLSSL 439
Query: 363 HIPPVPGLWHETLISKRQAHLNRP-IPHAIEGHLLLKLAHKLVTN 494
I P P LWHE S+R +RP +P AI G LL + AH+LV N
Sbjct: 440 DIKPFPTLWHEDNSSRRSHGRDRPRVPGAIAGPLLGEAAHRLVKN 484
>ref|XP_004139217.1| PREDICTED: 5'-3' exoribonuclease 4-like [Cucumis sativus]
Length = 934
Score = 110 bits (274), Expect = 1e-21
Identities = 61/165 (36%), Positives = 91/165 (55%), Gaps = 1/165 (0%)
Frame = +3
Query: 3 LTEEEKQRNSWTMDVLFVHFSHPLTSKILSFYQRKKDNPKLGKAKLKKRIDPEISNGMNG 182
LT+EEK RNS +D+L+ H +HPL+++I S+YQ P A+ ID S GMNG
Sbjct: 571 LTDEEKNRNSVMLDMLYTHCTHPLSAQIFSYYQVASQLPP--HARTCWVIDTNASGGMNG 628
Query: 183 LIYISDKTMFSFEIYSPVEGMEAITQNKTISTYFKAPSIQTHIARLPDGITLPNKSISKK 362
+++ ++ + + SP+ + I N+ ++ + P HI P G +P K +S
Sbjct: 629 YLWLCERNVIRNVVQSPINSLPDIQCNQVLNVTYLNPQKHKHIPEPPKGAIIPKKVLSSL 688
Query: 363 HIPPVPGLWHETLISKRQAHLNRP-IPHAIEGHLLLKLAHKLVTN 494
I P P LWHE S+R +RP +P AI G LL + AH+LV N
Sbjct: 689 DIKPFPTLWHEDNSSRRSHGRDRPRVPGAIAGPLLGEAAHRLVKN 733
>gb|ADN33909.1| 5'-3' exoribonuclease [Cucumis melo subsp. melo]
Length = 934
Score = 110 bits (274), Expect = 1e-21
Identities = 62/165 (37%), Positives = 91/165 (55%), Gaps = 1/165 (0%)
Frame = +3
Query: 3 LTEEEKQRNSWTMDVLFVHFSHPLTSKILSFYQRKKDNPKLGKAKLKKRIDPEISNGMNG 182
LT+EEK RNS +D+L+ H +HPL+++I S+YQ P A+ ID S GMNG
Sbjct: 571 LTDEEKNRNSIMLDLLYTHCTHPLSAQIFSYYQVASQLPP--HARTCWVIDTNASGGMNG 628
Query: 183 LIYISDKTMFSFEIYSPVEGMEAITQNKTISTYFKAPSIQTHIARLPDGITLPNKSISKK 362
+++ ++ + + SP+ G+ I N+ ++ + P HI P G +P K +S
Sbjct: 629 YLWLCERNVIRNVVPSPIIGLPDIQCNQVLNVTYLNPQKHKHIPEPPKGAIIPKKVLSSL 688
Query: 363 HIPPVPGLWHETLISKRQAHLNRP-IPHAIEGHLLLKLAHKLVTN 494
I P P LWHE S+R RP +P AI G LL + AH+LV N
Sbjct: 689 DIKPFPTLWHEDNSSRRSHGRERPRVPGAIAGPLLGEAAHRLVKN 733
>ref|XP_002512252.1| 5'->3' exoribonuclease, putative [Ricinus communis]
gi|223548213|gb|EEF49704.1| 5'->3' exoribonuclease,
putative [Ricinus communis]
Length = 964
Score = 110 bits (274), Expect = 1e-21
Identities = 61/165 (36%), Positives = 92/165 (55%), Gaps = 1/165 (0%)
Frame = +3
Query: 3 LTEEEKQRNSWTMDVLFVHFSHPLTSKILSFYQRKKDNPKLGKAKLKKRIDPEISNGMNG 182
LTEEE+ RNS +D+L+VH +HP+ +++++ YQ P+ + ID S GMNG
Sbjct: 602 LTEEERLRNSVMLDLLYVHPAHPMAAEVIAHYQGFNSLPQYQRKPWA--IDTNASAGMNG 659
Query: 183 LIYISDKTMFSFEIYSPVEGMEAITQNKTISTYFKAPSIQTHIARLPDGITLPNKSISKK 362
+++S++ M+ I SPV G I N+ ++ + P HI P+G+ +P K +
Sbjct: 660 YLWLSERNMWRSTIASPVNGFPDIEHNQVLNITYLNPINHRHIPEPPNGVVMPEKILKPL 719
Query: 363 HIPPVPGLWHETLISKRQAHLNRP-IPHAIEGHLLLKLAHKLVTN 494
I P P LWHE +RQ RP + AI G LL + AH+LV N
Sbjct: 720 DIKPFPMLWHEDHGGRRQQGRERPQVARAIAGPLLGEAAHRLVKN 764
>ref|XP_006382752.1| 5'-3' exoribonuclease family protein [Populus trichocarpa]
gi|550338119|gb|ERP60549.1| 5'-3' exoribonuclease family
protein [Populus trichocarpa]
Length = 948
Score = 108 bits (271), Expect = 3e-21
Identities = 58/176 (32%), Positives = 93/176 (52%)
Frame = +3
Query: 3 LTEEEKQRNSWTMDVLFVHFSHPLTSKILSFYQRKKDNPKLGKAKLKKRIDPEISNGMNG 182
L EEE+ RNS D+L+VH HPL+ +++S+Y P + LK ID S GMNG
Sbjct: 602 LMEEEQVRNSVMRDLLYVHPVHPLSQQVISYYHHNYRLPVSERIALK--IDTRASGGMNG 659
Query: 183 LIYISDKTMFSFEIYSPVEGMEAITQNKTISTYFKAPSIQTHIARLPDGITLPNKSISKK 362
+++S++ ++ + SP+ G+ + N+ ++ + PS HI P+G+ +P K +
Sbjct: 660 YLWLSERNVWRSVVPSPINGLPTLEYNQVLNITYLTPSSHRHIPEPPEGVVMPEKILKPT 719
Query: 363 HIPPVPGLWHETLISKRQAHLNRPIPHAIEGHLLLKLAHKLVTNYYGEKMKQDSVR 530
I P LWHE ++Q +P A+ G +L + AH+LV N K S R
Sbjct: 720 DIKLFPTLWHEDNGRRQQGRERPQVPRAVAGPVLGEAAHRLVKNTLNIKPNGSSSR 775
>ref|XP_002328516.1| predicted protein [Populus trichocarpa]
Length = 948
Score = 108 bits (271), Expect = 3e-21
Identities = 58/176 (32%), Positives = 93/176 (52%)
Frame = +3
Query: 3 LTEEEKQRNSWTMDVLFVHFSHPLTSKILSFYQRKKDNPKLGKAKLKKRIDPEISNGMNG 182
L EEE+ RNS D+L+VH HPL+ +++S+Y P + LK ID S GMNG
Sbjct: 602 LMEEEQVRNSVMRDLLYVHPVHPLSQQVISYYHHNYRLPVSERIALK--IDTRASGGMNG 659
Query: 183 LIYISDKTMFSFEIYSPVEGMEAITQNKTISTYFKAPSIQTHIARLPDGITLPNKSISKK 362
+++S++ ++ + SP+ G+ + N+ ++ + PS HI P+G+ +P K +
Sbjct: 660 YLWLSERNVWRSVVPSPINGLPTLEYNQVLNITYLTPSSHRHIPEPPEGVVMPEKILKPT 719
Query: 363 HIPPVPGLWHETLISKRQAHLNRPIPHAIEGHLLLKLAHKLVTNYYGEKMKQDSVR 530
I P LWHE ++Q +P A+ G +L + AH+LV N K S R
Sbjct: 720 DIKLFPTLWHEDNGRRQQGRERPQVPRAVAGPVLGEAAHRLVKNTLNIKPNGSSSR 775