BLASTX nr result
ID: Zingiber25_contig00027087
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00027087
(755 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002268270.1| PREDICTED: uncharacterized protein LOC100247... 169 7e-40
ref|NP_001047139.1| Os02g0557500 [Oryza sativa Japonica Group] g... 168 2e-39
gb|EEE57196.1| hypothetical protein OsJ_07143 [Oryza sativa Japo... 168 2e-39
sp|Q6YVX9.2|C3H16_ORYSJ RecName: Full=Zinc finger CCCH domain-co... 168 2e-39
ref|XP_004952780.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ... 167 5e-39
emb|CBI29641.3| unnamed protein product [Vitis vinifera] 166 1e-38
gb|EEC73406.1| hypothetical protein OsI_07661 [Oryza sativa Indi... 165 1e-38
dbj|BAJ93022.1| predicted protein [Hordeum vulgare subsp. vulgare] 160 3e-37
ref|XP_002453990.1| hypothetical protein SORBIDRAFT_04g022810 [S... 159 1e-36
gb|EOY25726.1| Zinc finger C-x8-C-x5-C-x3-H type family protein ... 158 2e-36
gb|EOY25725.1| Zinc finger C-x8-C-x5-C-x3-H type family protein ... 158 2e-36
gb|EOY25724.1| Zinc finger C-x8-C-x5-C-x3-H type family protein ... 158 2e-36
ref|XP_003572619.1| PREDICTED: zinc finger CCCH domain-containin... 156 6e-36
ref|XP_006647379.1| PREDICTED: zinc finger CCCH domain-containin... 155 1e-35
ref|XP_006647378.1| PREDICTED: zinc finger CCCH domain-containin... 155 1e-35
gb|AEV45823.1| rough endosperm 3-umu1 alpha isoform [Zea mays] 152 9e-35
ref|NP_001241852.1| RGH3 splicing factor [Zea mays] gi|330470888... 152 9e-35
ref|XP_002328731.1| predicted protein [Populus trichocarpa] 152 2e-34
ref|XP_004230418.1| PREDICTED: zinc finger CCCH domain-containin... 151 2e-34
ref|XP_006836876.1| hypothetical protein AMTR_s00099p00102890 [A... 149 8e-34
>ref|XP_002268270.1| PREDICTED: uncharacterized protein LOC100247160 [Vitis vinifera]
Length = 887
Score = 169 bits (429), Expect = 7e-40
Identities = 97/225 (43%), Positives = 122/225 (54%), Gaps = 6/225 (2%)
Frame = +3
Query: 3 RWKVAICGEYMKSKFKTCSHGTACNFIHCFRNPGGDYEWADWDNPPPKYWIKRMIALFGT 182
RWKVAICGEYMKS+FKTCSHGTACNFIHCFRNPGGDYEWADWD PPP+YW+K M+ALFG
Sbjct: 334 RWKVAICGEYMKSRFKTCSHGTACNFIHCFRNPGGDYEWADWDKPPPRYWVKNMVALFGL 393
Query: 183 STECQYDKLVDYRESERFRRSDR--TPSKKRFHSRRSDSGGSPTKESDTTRDPYSHSSIR 356
+ E YDK V R R + T R+HSRRS S +ES YSH
Sbjct: 394 TDESGYDKEVKQESMGRRRSTSNAGTVDADRYHSRRSRS-----RESG-----YSHGEYA 443
Query: 357 REQFSSRREEYAALTEKHDRDRGHGKFVKSGRTRNCDSAEGNYKENNRVSLKNHHKYEDN 536
R QF ++H D K +K R + A +R + N D
Sbjct: 444 RRQFDENDAHKNVYYQRHTSD--GRKRIKMHEERYEEEAHFGDNRYSRSRIHNVESDGDL 501
Query: 537 YYD---DQERHKMKHKEYSLRRKRGKNYSIEYAENKSR-FHEKGD 659
D D+ERH ++ S +R++ +Y E K++ + +GD
Sbjct: 502 LRDGTRDRERHNDHRRKSSRQREKVLESPDDYGERKNKTYDSEGD 546
>ref|NP_001047139.1| Os02g0557500 [Oryza sativa Japonica Group]
gi|46390906|dbj|BAD16421.1| U2 snRNP auxiliary
factor-like protein [Oryza sativa Japonica Group]
gi|113536670|dbj|BAF09053.1| Os02g0557500 [Oryza sativa
Japonica Group]
Length = 401
Score = 168 bits (426), Expect = 2e-39
Identities = 103/254 (40%), Positives = 133/254 (52%), Gaps = 4/254 (1%)
Frame = +3
Query: 3 RWKVAICGEYMKSKFKTCSHGTACNFIHCFRNPGGDYEWADWDNPPPKYWIKRMIALFGT 182
RWKVAICGEYM+S+FKTCS G ACNFIHCFRNPGGDYEWADWDNPPP+YWI++M ALFG
Sbjct: 20 RWKVAICGEYMRSRFKTCSRGIACNFIHCFRNPGGDYEWADWDNPPPRYWIRKMAALFGP 79
Query: 183 STECQYDKLVDYRESERFRRSDRTPSKKRFHSRRSDSGGSPTKESDTTRDPYSHSSIRRE 362
S + Y K D ER + SDR R SD +P++ TRD +H
Sbjct: 80 SDDSIYGKPSDTPHLERSQSSDRR------RPRSSDPRYTPSR----TRDEDAHKQHSSR 129
Query: 363 QFSSRREEYAALTEKHDRDRGHGKFVKSGRTRNCDSAEGNYKENNRVSLKNHHKYEDNYY 542
+S + E ++ TE H RDR R R Y N ++H Y
Sbjct: 130 DYSHSKHERSSHTE-HRRDRKESSASDKHRHREIKDKTSKYSSNMESERESHK------Y 182
Query: 543 DDQERHKMKHKEYSLRRKRGKNYSIEYAENKSRFHEKGDVQSSDYTDDDRQFSDDQST-S 719
+E+H++ H +G + + +N+S E + SS + D F D +T S
Sbjct: 183 MREEKHRIDHGNGG----KGDHGKVRSRKNRSERQESLEPGSSGRSSD---FIDQDTTES 235
Query: 720 LSGEKSS---HKDT 752
SG KS+ HK T
Sbjct: 236 PSGSKSTGRHHKKT 249
>gb|EEE57196.1| hypothetical protein OsJ_07143 [Oryza sativa Japonica Group]
Length = 635
Score = 168 bits (426), Expect = 2e-39
Identities = 103/254 (40%), Positives = 133/254 (52%), Gaps = 4/254 (1%)
Frame = +3
Query: 3 RWKVAICGEYMKSKFKTCSHGTACNFIHCFRNPGGDYEWADWDNPPPKYWIKRMIALFGT 182
RWKVAICGEYM+S+FKTCS G ACNFIHCFRNPGGDYEWADWDNPPP+YWI++M ALFG
Sbjct: 254 RWKVAICGEYMRSRFKTCSRGIACNFIHCFRNPGGDYEWADWDNPPPRYWIRKMAALFGP 313
Query: 183 STECQYDKLVDYRESERFRRSDRTPSKKRFHSRRSDSGGSPTKESDTTRDPYSHSSIRRE 362
S + Y K D ER + SDR R SD +P++ TRD +H
Sbjct: 314 SDDSIYGKPSDTPHLERSQSSDRR------RPRSSDPRYTPSR----TRDEDAHKQHSSR 363
Query: 363 QFSSRREEYAALTEKHDRDRGHGKFVKSGRTRNCDSAEGNYKENNRVSLKNHHKYEDNYY 542
+S + E ++ TE H RDR R R Y N ++H Y
Sbjct: 364 DYSHSKHERSSHTE-HRRDRKESSASDKHRHREIKDKTSKYSSNMESERESHK------Y 416
Query: 543 DDQERHKMKHKEYSLRRKRGKNYSIEYAENKSRFHEKGDVQSSDYTDDDRQFSDDQST-S 719
+E+H++ H +G + + +N+S E + SS + D F D +T S
Sbjct: 417 MREEKHRIDHGNGG----KGDHGKVRSRKNRSERQESLEPGSSGRSSD---FIDQDTTES 469
Query: 720 LSGEKSS---HKDT 752
SG KS+ HK T
Sbjct: 470 PSGSKSTGRHHKKT 483
>sp|Q6YVX9.2|C3H16_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 16;
Short=OsC3H16
Length = 678
Score = 168 bits (426), Expect = 2e-39
Identities = 103/254 (40%), Positives = 133/254 (52%), Gaps = 4/254 (1%)
Frame = +3
Query: 3 RWKVAICGEYMKSKFKTCSHGTACNFIHCFRNPGGDYEWADWDNPPPKYWIKRMIALFGT 182
RWKVAICGEYM+S+FKTCS G ACNFIHCFRNPGGDYEWADWDNPPP+YWI++M ALFG
Sbjct: 297 RWKVAICGEYMRSRFKTCSRGIACNFIHCFRNPGGDYEWADWDNPPPRYWIRKMAALFGP 356
Query: 183 STECQYDKLVDYRESERFRRSDRTPSKKRFHSRRSDSGGSPTKESDTTRDPYSHSSIRRE 362
S + Y K D ER + SDR R SD +P++ TRD +H
Sbjct: 357 SDDSIYGKPSDTPHLERSQSSDRR------RPRSSDPRYTPSR----TRDEDAHKQHSSR 406
Query: 363 QFSSRREEYAALTEKHDRDRGHGKFVKSGRTRNCDSAEGNYKENNRVSLKNHHKYEDNYY 542
+S + E ++ TE H RDR R R Y N ++H Y
Sbjct: 407 DYSHSKHERSSHTE-HRRDRKESSASDKHRHREIKDKTSKYSSNMESERESHK------Y 459
Query: 543 DDQERHKMKHKEYSLRRKRGKNYSIEYAENKSRFHEKGDVQSSDYTDDDRQFSDDQST-S 719
+E+H++ H +G + + +N+S E + SS + D F D +T S
Sbjct: 460 MREEKHRIDHGNGG----KGDHGKVRSRKNRSERQESLEPGSSGRSSD---FIDQDTTES 512
Query: 720 LSGEKSS---HKDT 752
SG KS+ HK T
Sbjct: 513 PSGSKSTGRHHKKT 526
>ref|XP_004952780.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 16-like [Setaria italica]
Length = 759
Score = 167 bits (422), Expect = 5e-39
Identities = 103/256 (40%), Positives = 135/256 (52%), Gaps = 8/256 (3%)
Frame = +3
Query: 3 RWKVAICGEYMKSKFKTCSHGTACNFIHCFRNPGGDYEWADWDNPPPKYWIKRMIALFGT 182
RWK +ICGEYM+S++KTCSHG ACNFIHCFRNPGGDYEWADWDNPPP+YWI++M+ALFG
Sbjct: 355 RWKASICGEYMRSRYKTCSHGVACNFIHCFRNPGGDYEWADWDNPPPRYWIRKMVALFGP 414
Query: 183 STECQYDKLVDYRESERFRRSDR---TPSKKRFHSRRSDSGGSPTKESDTTRDPYSHSSI 353
+ + +DK D R+ ER + S+R S R+ RRS T+ S YSHS
Sbjct: 415 AADATHDKASDTRDFERLQHSNRKRLKSSSDRYVPRRSMDEDVHTRYSS---QDYSHSKQ 471
Query: 354 RREQFSSRREEYAALTEKHDRDRGHGKFVKSGRTRNCDSAEGNYKENNRVSLKNHHKYED 533
R S E DR HG+ K+ + + + KEN
Sbjct: 472 ERSSHSMNYEYRQHRRGSSATDRHHGQDTKT------NGRQFSTKEN------------- 512
Query: 534 NYYDDQERHKMKHKEYSLRRKRGKNYSIEYAENKSRFH---EKGDVQ--SSDYTDDDRQF 698
+ + HK KH+E RR+ + +Y + SR H ++G + SSD+ D
Sbjct: 513 ----ESQVHKHKHEE---RRRSDHSDGGKYDKISSRKHQSDQRGSCEPGSSDWPSD--LT 563
Query: 699 SDDQSTSLSGEKSSHK 746
D S SG KSS K
Sbjct: 564 DTDASKGPSGGKSSSK 579
>emb|CBI29641.3| unnamed protein product [Vitis vinifera]
Length = 875
Score = 166 bits (419), Expect = 1e-38
Identities = 99/251 (39%), Positives = 126/251 (50%), Gaps = 2/251 (0%)
Frame = +3
Query: 3 RWKVAICGEYMKSKFKTCSHGTACNFIHCFRNPGGDYEWADWDNPPPKYWIKRMIALFGT 182
RWKVAICGEYMKS+FKTCSHGTACNFIHCFRNPGGDYEWADWD PPP+YW+K M+ALFG
Sbjct: 358 RWKVAICGEYMKSRFKTCSHGTACNFIHCFRNPGGDYEWADWDKPPPRYWVKNMVALFGL 417
Query: 183 STECQYDKLVDYRESERFRRSDR--TPSKKRFHSRRSDSGGSPTKESDTTRDPYSHSSIR 356
+ E YDK V R R + T R+HSRRS S +ES YSH
Sbjct: 418 TDESGYDKEVKQESMGRRRSTSNAGTVDADRYHSRRSRS-----RESG-----YSHGEYA 467
Query: 357 REQFSSRREEYAALTEKHDRDRGHGKFVKSGRTRNCDSAEGNYKENNRVSLKNHHKYEDN 536
R QF ++H D K +K R E ++ +N + H+ D
Sbjct: 468 RRQFDENDAHKNVYYQRHTSD--GRKRIKMHEERY--EEEAHFGDNRYSRSRIHNVESDG 523
Query: 537 YYDDQERHKMKHKEYSLRRKRGKNYSIEYAENKSRFHEKGDVQSSDYTDDDRQFSDDQST 716
+ + K H SL+ ++ E + + GD +S + D SD +
Sbjct: 524 DLEGDKSRKHGHTRKSLKHQK---------EAMAVMDDLGDSNNSIHEPD----SDGGWS 570
Query: 717 SLSGEKSSHKD 749
G+ H D
Sbjct: 571 DRDGDHDGHHD 581
>gb|EEC73406.1| hypothetical protein OsI_07661 [Oryza sativa Indica Group]
Length = 731
Score = 165 bits (418), Expect = 1e-38
Identities = 102/254 (40%), Positives = 132/254 (51%), Gaps = 4/254 (1%)
Frame = +3
Query: 3 RWKVAICGEYMKSKFKTCSHGTACNFIHCFRNPGGDYEWADWDNPPPKYWIKRMIALFGT 182
RWKVAICGEYM+S+FKTCS G ACNFIHCFRNPGGDYEWADWDN PP+YWI++M ALFG
Sbjct: 350 RWKVAICGEYMRSRFKTCSRGIACNFIHCFRNPGGDYEWADWDNSPPRYWIRKMAALFGP 409
Query: 183 STECQYDKLVDYRESERFRRSDRTPSKKRFHSRRSDSGGSPTKESDTTRDPYSHSSIRRE 362
S + Y K D ER + SDR R SD +P++ TRD +H
Sbjct: 410 SDDSIYGKPSDTPHLERSQSSDRR------RPRSSDPRYTPSR----TRDEDAHKQHSSR 459
Query: 363 QFSSRREEYAALTEKHDRDRGHGKFVKSGRTRNCDSAEGNYKENNRVSLKNHHKYEDNYY 542
+S + E ++ TE H RDR R R Y N ++H Y
Sbjct: 460 DYSHSKHERSSHTE-HRRDRKESSASDKHRHREIKDKTSKYSSNMESERESHK------Y 512
Query: 543 DDQERHKMKHKEYSLRRKRGKNYSIEYAENKSRFHEKGDVQSSDYTDDDRQFSDDQST-S 719
+E+H++ H +G + + +N+S E + SS + D F D +T S
Sbjct: 513 MREEKHRIDHGNGG----KGDHGKVRSRKNRSERQESLEPGSSGRSSD---FIDQDTTES 565
Query: 720 LSGEKSS---HKDT 752
SG KS+ HK T
Sbjct: 566 PSGSKSTGRHHKKT 579
>dbj|BAJ93022.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 495
Score = 160 bits (406), Expect = 3e-37
Identities = 95/244 (38%), Positives = 125/244 (51%), Gaps = 3/244 (1%)
Frame = +3
Query: 3 RWKVAICGEYMKSKFKTCSHGTACNFIHCFRNPGGDYEWADWDNPPPKYWIKRMIALFGT 182
+WK AICGEYM+S+FKTCSHG ACNFIHCFRNPGGDYEWADWDNPPPKYW ++M ALFG
Sbjct: 81 KWKSAICGEYMRSRFKTCSHGVACNFIHCFRNPGGDYEWADWDNPPPKYWTRKMAALFGP 140
Query: 183 STECQYDKLVDYRESERFRRSDR---TPSKKRFHSRRSDSGGSPTKESDTTRDPYSHSSI 353
S + +DK D + ER SDR S R+ S R G + + S +SHS
Sbjct: 141 SDDAVFDKASDAPDFERLHSSDRKRLRSSDDRYISSRHRDGDAHKRHSSRV---FSHSKQ 197
Query: 354 RREQFSSRREEYAALTEKHDRDRGHGKFVKSGRTRNCDSAEGNYKENNRVSLKNHHKYED 533
+ + + E + G ++ R C EN RVS HK E
Sbjct: 198 EQSNYIMKYGHTRHSREPSTAKKQRGHEIEDDIGRYCSPV-----ENERVS--QTHKRE- 249
Query: 534 NYYDDQERHKMKHKEYSLRRKRGKNYSIEYAENKSRFHEKGDVQSSDYTDDDRQFSDDQS 713
E+H+ H + + RG N I+ +++S HE + SD+ + +S
Sbjct: 250 ------EKHRDGHGDGA----RGDNGKIKSRKHRSEQHESLESGCSDWPSEFADAGTSRS 299
Query: 714 TSLS 725
S S
Sbjct: 300 PSCS 303
>ref|XP_002453990.1| hypothetical protein SORBIDRAFT_04g022810 [Sorghum bicolor]
gi|241933821|gb|EES06966.1| hypothetical protein
SORBIDRAFT_04g022810 [Sorghum bicolor]
Length = 410
Score = 159 bits (402), Expect = 1e-36
Identities = 92/245 (37%), Positives = 129/245 (52%), Gaps = 12/245 (4%)
Frame = +3
Query: 3 RWKVAICGEYMKSKFKTCSHGTACNFIHCFRNPGGDYEWADWDNPPPKYWIKRMIALFGT 182
RWK AICG+YM+S++KTCSHG ACNFIHCFRNPGGDYEWADWDNPPP+YWI++M ALFG
Sbjct: 20 RWKAAICGDYMRSRYKTCSHGVACNFIHCFRNPGGDYEWADWDNPPPRYWIRKMTALFGP 79
Query: 183 STECQYDKLVDYRESERFRRSDRTPSKKRFHSRRSDSGGSPTKESDTTR-DPYSHSSIRR 359
S + Y+K D + SDR K + S R S GS ++ T YSHS +
Sbjct: 80 SVDTMYEKESDTPNFKSSEGSDR--KKLKISSNRYVSRGSRDEDVHTRHSQDYSHS---K 134
Query: 360 EQFSSRREEYAALTEKHDRDRGHGKFVKSGRTRNCDSAEG-NYKENNRVSLKNHHKYEDN 536
++ SS Y ++ R R V R R+ + G + S + HK+E+
Sbjct: 135 QEHSSHSMNY-----EYKRHRRDSSSVDKHRRRDVEDTNGRQFSTMENDSESHRHKHEER 189
Query: 537 YYDDQERHKMKHKEYSLRR----KRG------KNYSIEYAENKSRFHEKGDVQSSDYTDD 686
+ D + K + R+ +RG ++ ++ + R G+ +S Y D
Sbjct: 190 HRSDHGNGEKKDDKTRPRKHCSDRRGSLEPGYSDWPSDFTDTDIRKGSSGEKSTSRYEYD 249
Query: 687 DRQFS 701
D + S
Sbjct: 250 DAKRS 254
>gb|EOY25726.1| Zinc finger C-x8-C-x5-C-x3-H type family protein isoform 3 [Theobroma
cacao]
Length = 850
Score = 158 bits (399), Expect = 2e-36
Identities = 93/254 (36%), Positives = 126/254 (49%), Gaps = 6/254 (2%)
Frame = +3
Query: 3 RWKVAICGEYMKSKFKTCSHGTACNFIHCFRNPGGDYEWADWDNPPPKYWIKRMIALFGT 182
RWKVAICGE+MKS+ KTCSHGTACNFIHCFRNPGGDYEWADWD PPP+YW+K+M ALFG
Sbjct: 345 RWKVAICGEFMKSRLKTCSHGTACNFIHCFRNPGGDYEWADWDKPPPRYWVKKMGALFGY 404
Query: 183 STECQYDKLVDYRESERFRRSDRT--PSKKRFHSRRSDSGGSPTKESDTTRDPYSHSSIR 356
S E ++K ++ S + R R R SRRS S R P +
Sbjct: 405 SDEAGFEKQIEQEHSGQSRNRSRVIKSDADRHRSRRSKSREMNRLIGGADRSPCIEDDVE 464
Query: 357 REQFSSRREEYAALTEKHDRDRGHGKFVKSGRTRNCDSAEGNYKENNRVSLKNHHKYEDN 536
S R + +DR + G +S R +S + +N KNH D
Sbjct: 465 ESSHSQR-------GKNNDRKQTKGLDGRSYR----ESKSLKWDQNRE---KNHDTSSDG 510
Query: 537 YYDDQERHKM--KHKEYSLRRKRGKNYSIEYAENKSRFHEKGDVQSSDYTDDDRQFSDD- 707
Y D +R K + + +L + + S+ + +N H+ Y+D R +D
Sbjct: 511 GYSDSKRGKKIDRKRAKTLDGRSDRQRSLTWDQNSEEIHDTS--SDGGYSDSKRGKKNDR 568
Query: 708 -QSTSLSGEKSSHK 746
Q+ +L G +
Sbjct: 569 KQAKTLDGRSDRQR 582
>gb|EOY25725.1| Zinc finger C-x8-C-x5-C-x3-H type family protein isoform 2 [Theobroma
cacao]
Length = 855
Score = 158 bits (399), Expect = 2e-36
Identities = 93/254 (36%), Positives = 126/254 (49%), Gaps = 6/254 (2%)
Frame = +3
Query: 3 RWKVAICGEYMKSKFKTCSHGTACNFIHCFRNPGGDYEWADWDNPPPKYWIKRMIALFGT 182
RWKVAICGE+MKS+ KTCSHGTACNFIHCFRNPGGDYEWADWD PPP+YW+K+M ALFG
Sbjct: 350 RWKVAICGEFMKSRLKTCSHGTACNFIHCFRNPGGDYEWADWDKPPPRYWVKKMGALFGY 409
Query: 183 STECQYDKLVDYRESERFRRSDRT--PSKKRFHSRRSDSGGSPTKESDTTRDPYSHSSIR 356
S E ++K ++ S + R R R SRRS S R P +
Sbjct: 410 SDEAGFEKQIEQEHSGQSRNRSRVIKSDADRHRSRRSKSREMNRLIGGADRSPCIEDDVE 469
Query: 357 REQFSSRREEYAALTEKHDRDRGHGKFVKSGRTRNCDSAEGNYKENNRVSLKNHHKYEDN 536
S R + +DR + G +S R +S + +N KNH D
Sbjct: 470 ESSHSQR-------GKNNDRKQTKGLDGRSYR----ESKSLKWDQNRE---KNHDTSSDG 515
Query: 537 YYDDQERHKM--KHKEYSLRRKRGKNYSIEYAENKSRFHEKGDVQSSDYTDDDRQFSDD- 707
Y D +R K + + +L + + S+ + +N H+ Y+D R +D
Sbjct: 516 GYSDSKRGKKIDRKRAKTLDGRSDRQRSLTWDQNSEEIHDTS--SDGGYSDSKRGKKNDR 573
Query: 708 -QSTSLSGEKSSHK 746
Q+ +L G +
Sbjct: 574 KQAKTLDGRSDRQR 587
>gb|EOY25724.1| Zinc finger C-x8-C-x5-C-x3-H type family protein isoform 1
[Theobroma cacao]
Length = 626
Score = 158 bits (399), Expect = 2e-36
Identities = 93/254 (36%), Positives = 126/254 (49%), Gaps = 6/254 (2%)
Frame = +3
Query: 3 RWKVAICGEYMKSKFKTCSHGTACNFIHCFRNPGGDYEWADWDNPPPKYWIKRMIALFGT 182
RWKVAICGE+MKS+ KTCSHGTACNFIHCFRNPGGDYEWADWD PPP+YW+K+M ALFG
Sbjct: 121 RWKVAICGEFMKSRLKTCSHGTACNFIHCFRNPGGDYEWADWDKPPPRYWVKKMGALFGY 180
Query: 183 STECQYDKLVDYRESERFRRSDRT--PSKKRFHSRRSDSGGSPTKESDTTRDPYSHSSIR 356
S E ++K ++ S + R R R SRRS S R P +
Sbjct: 181 SDEAGFEKQIEQEHSGQSRNRSRVIKSDADRHRSRRSKSREMNRLIGGADRSPCIEDDVE 240
Query: 357 REQFSSRREEYAALTEKHDRDRGHGKFVKSGRTRNCDSAEGNYKENNRVSLKNHHKYEDN 536
S R + +DR + G +S R +S + +N KNH D
Sbjct: 241 ESSHSQR-------GKNNDRKQTKGLDGRSYR----ESKSLKWDQNRE---KNHDTSSDG 286
Query: 537 YYDDQERHKM--KHKEYSLRRKRGKNYSIEYAENKSRFHEKGDVQSSDYTDDDRQFSDD- 707
Y D +R K + + +L + + S+ + +N H+ Y+D R +D
Sbjct: 287 GYSDSKRGKKIDRKRAKTLDGRSDRQRSLTWDQNSEEIHDTS--SDGGYSDSKRGKKNDR 344
Query: 708 -QSTSLSGEKSSHK 746
Q+ +L G +
Sbjct: 345 KQAKTLDGRSDRQR 358
>ref|XP_003572619.1| PREDICTED: zinc finger CCCH domain-containing protein 16-like
[Brachypodium distachyon]
Length = 748
Score = 156 bits (395), Expect = 6e-36
Identities = 100/259 (38%), Positives = 130/259 (50%), Gaps = 8/259 (3%)
Frame = +3
Query: 3 RWKVAICGEYMKSKFKTCSHGTACNFIHCFRNPGGDYEWADWDNPPPKYWIKRMIALFGT 182
+WK AICGEYM+S+FKTCSHG ACNFIHCFRNPGGDYEWADWDNPPPK+W ++M+ALFG
Sbjct: 340 KWKAAICGEYMRSRFKTCSHGVACNFIHCFRNPGGDYEWADWDNPPPKHWTRKMVALFGP 399
Query: 183 STECQYDKLVDYRESERFRRSDRTPSKKRFHSRRSDSGGSPTKESDTTRDPYSHSSIRRE 362
S + + K D + E SDR KR S + S T++ D R HSS
Sbjct: 400 SDDASFGKASDTPDFEWSCDSDR----KRLRSSDNRHVSSRTEDKDAHR---RHSS---R 449
Query: 363 QFSSRREEYAALTEKHDRDRGHGKFVKSGRTRNCDSAEGNYK-----ENNRVSLKNHHKY 527
+S + E ++ K RDR + + + R+ + + K EN RVS H
Sbjct: 450 DYSHSKHELSSHIRKSGRDRHRREPSAANKQRDQKNEDNTEKHCSAMENERVSYT--HMC 507
Query: 528 ED---NYYDDQERHKMKHKEYSLRRKRGKNYSIEYAENKSRFHEKGDVQSSDYTDDDRQF 698
E+ NY+DD R + E KSR H +S + T D
Sbjct: 508 EERHRNYHDDGGRQ-------------------DGTEIKSRKHRSEWQESVEPTSDWPSE 548
Query: 699 SDDQSTSLSGEKSSHKDTF 755
D TS S +S D +
Sbjct: 549 FTDAGTSKSPSRSKPTDRY 567
>ref|XP_006647379.1| PREDICTED: zinc finger CCCH domain-containing protein 16-like
isoform X2 [Oryza brachyantha]
gi|573919534|ref|XP_006647380.1| PREDICTED: zinc finger
CCCH domain-containing protein 16-like isoform X3 [Oryza
brachyantha] gi|573919536|ref|XP_006647381.1| PREDICTED:
zinc finger CCCH domain-containing protein 16-like
isoform X4 [Oryza brachyantha]
Length = 511
Score = 155 bits (393), Expect = 1e-35
Identities = 98/249 (39%), Positives = 128/249 (51%), Gaps = 3/249 (1%)
Frame = +3
Query: 3 RWKVAICGEYMKSKFKTCSHGTACNFIHCFRNPGGDYEWADWDNPPPKYWIKRMIALFGT 182
RWKVAICGEYM+S+FKTCS G ACNFIHCFRNPGGDYEWADWDNPPPKYWI++M ALFG
Sbjct: 100 RWKVAICGEYMRSRFKTCSRGIACNFIHCFRNPGGDYEWADWDNPPPKYWIRKMAALFGH 159
Query: 183 STECQYDKLVDYRESERFRRSDRTPSKKRFHSRRSDSGGSPTKESDTTRDPYSHSSIRRE 362
S + Y K D + SDR RRS T D + S R
Sbjct: 160 SDDAVYGKGSDTPCFDHSWSSDR--------RRRSYDPSRYTPSRSRNEDVHKQHSSR-- 209
Query: 363 QFSSRREEYAALTEKHDRDRGHGKFVKSGRTRNCDSAEGNYKENNRVSLKNHHKYEDNYY 542
+S ++E + TE H RDR R+R Y N +++ + + N
Sbjct: 210 DYSHSKQERRSHTE-HIRDRRESSASDKHRSREIKDKISKYSSN----IESERESQKNAR 264
Query: 543 DDQER--HKMKHKEYSLRRKRGKNYSIEYAENKSRFHEKGDVQSSDYTDDDRQFSDDQST 716
++ R H+ +H ++G + + + N S + + SSD D F+D ST
Sbjct: 265 GERHRSAHEERHGSDPGEGEKGDHGKVRFRNNGSERQDSLEPGSSDRHFD---FTDADST 321
Query: 717 -SLSGEKSS 740
S SG KS+
Sbjct: 322 KSPSGSKST 330
>ref|XP_006647378.1| PREDICTED: zinc finger CCCH domain-containing protein 16-like
isoform X1 [Oryza brachyantha]
Length = 604
Score = 155 bits (392), Expect = 1e-35
Identities = 98/254 (38%), Positives = 128/254 (50%), Gaps = 8/254 (3%)
Frame = +3
Query: 3 RWKVAICGEYMKSKFKTCSHGTACNFIHCFRNPGGDYEWADWDNPPPKYWIKRMIALFGT 182
RWKVAICGEYM+S+FKTCS G ACNFIHCFRNPGGDYEWADWDNPPPKYWI++M ALFG
Sbjct: 194 RWKVAICGEYMRSRFKTCSRGIACNFIHCFRNPGGDYEWADWDNPPPKYWIRKMAALFGH 253
Query: 183 STECQYDK-----LVDYRESERFRRSDRTPSKKRFHSRRSDSGGSPTKESDTTRDPYSHS 347
S + Y K D+ S RR P SR D + ++RD YSHS
Sbjct: 254 SDDAVYGKGSDTPCFDHSWSSDRRRRSYDPRYTPSRSRNED-----VHKQHSSRD-YSHS 307
Query: 348 SIRREQFSSRREEYAALTEKHDRDRGHGKFVKSGRTRNCDSAEGNYKENNRVSLKNHHKY 527
R + +H RDR R+R Y N +++ +
Sbjct: 308 KQERRSHT-----------EHIRDRRESSASDKHRSREIKDKISKYSSN----IESERES 352
Query: 528 EDNYYDDQER--HKMKHKEYSLRRKRGKNYSIEYAENKSRFHEKGDVQSSDYTDDDRQFS 701
+ N ++ R H+ +H ++G + + + N S + + SSD D F+
Sbjct: 353 QKNARGERHRSAHEERHGSDPGEGEKGDHGKVRFRNNGSERQDSLEPGSSDRHFD---FT 409
Query: 702 DDQST-SLSGEKSS 740
D ST S SG KS+
Sbjct: 410 DADSTKSPSGSKST 423
>gb|AEV45823.1| rough endosperm 3-umu1 alpha isoform [Zea mays]
Length = 790
Score = 152 bits (385), Expect = 9e-35
Identities = 94/250 (37%), Positives = 127/250 (50%), Gaps = 2/250 (0%)
Frame = +3
Query: 3 RWKVAICGEYMKSKFKTCSHGTACNFIHCFRNPGGDYEWADWDNPPPKYWIKRMIALFGT 182
RWK AICGEYM+S++KTCSHG ACNFIHCFRNPGGDYEWADWDN PP+YWI++M+ALFG
Sbjct: 389 RWKAAICGEYMRSRYKTCSHGVACNFIHCFRNPGGDYEWADWDNHPPRYWIRKMVALFGP 448
Query: 183 STECQYDKLVDYRESERFRRSDRTPSKKRFHSRRSDSGGSPTKESDTTRDP--YSHSSIR 356
S + +K + SDR K + S R S GS ++ T P YSHS
Sbjct: 449 SVDEMNEKASHTPDFRSSVGSDR--KKLKISSNRYVSRGSRNEDVHTRHSPQDYSHS--- 503
Query: 357 REQFSSRREEYAALTEKHDRDRGHGKFVKSGRTRNCDSAEGNYKENNRVSLKNHHKYEDN 536
+++ SS Y K D K R D+ + + S + HK+E+
Sbjct: 504 KQERSSHNMNYEYRRHKRDSSAAD----KHRRQDVGDTNDRQFSTMGNDSKSHRHKHEER 559
Query: 537 YYDDQERHKMKHKEYSLRRKRGKNYSIEYAENKSRFHEKGDVQSSDYTDDDRQFSDDQST 716
+ D H KE + + K+ S+ + + + S D+T D S
Sbjct: 560 HRSD---HGNGEKEDDSKTRPRKHCSVRRGSLEVGYSD----WSPDFT------GTDNSK 606
Query: 717 SLSGEKSSHK 746
SGEKS+ +
Sbjct: 607 GPSGEKSTSR 616
>ref|NP_001241852.1| RGH3 splicing factor [Zea mays] gi|330470888|gb|AEC32092.1| RGH3
splicing factor [Zea mays] gi|356609668|gb|AET25330.1|
RGH3/ZmURP alpha protein isoform [Zea mays]
gi|359392836|gb|AEV45825.1| rough endosperm 3 alpha
isoform [Zea mays]
Length = 755
Score = 152 bits (385), Expect = 9e-35
Identities = 94/250 (37%), Positives = 127/250 (50%), Gaps = 2/250 (0%)
Frame = +3
Query: 3 RWKVAICGEYMKSKFKTCSHGTACNFIHCFRNPGGDYEWADWDNPPPKYWIKRMIALFGT 182
RWK AICGEYM+S++KTCSHG ACNFIHCFRNPGGDYEWADWDN PP+YWI++M+ALFG
Sbjct: 354 RWKAAICGEYMRSRYKTCSHGVACNFIHCFRNPGGDYEWADWDNHPPRYWIRKMVALFGP 413
Query: 183 STECQYDKLVDYRESERFRRSDRTPSKKRFHSRRSDSGGSPTKESDTTRDP--YSHSSIR 356
S + +K + SDR K + S R S GS ++ T P YSHS
Sbjct: 414 SVDEMNEKASHTPDFRSSVGSDR--KKLKISSNRYVSRGSRNEDVHTRHSPQDYSHS--- 468
Query: 357 REQFSSRREEYAALTEKHDRDRGHGKFVKSGRTRNCDSAEGNYKENNRVSLKNHHKYEDN 536
+++ SS Y K D K R D+ + + S + HK+E+
Sbjct: 469 KQERSSHNMNYEYRRHKRDSSAAD----KHRRQDVGDTNDRQFSTMGNDSKSHRHKHEER 524
Query: 537 YYDDQERHKMKHKEYSLRRKRGKNYSIEYAENKSRFHEKGDVQSSDYTDDDRQFSDDQST 716
+ D H KE + + K+ S+ + + + S D+T D S
Sbjct: 525 HRSD---HGNGEKEDDSKTRPRKHCSVRRGSLEVGYSD----WSPDFT------GTDNSK 571
Query: 717 SLSGEKSSHK 746
SGEKS+ +
Sbjct: 572 GPSGEKSTSR 581
>ref|XP_002328731.1| predicted protein [Populus trichocarpa]
Length = 546
Score = 152 bits (383), Expect = 2e-34
Identities = 94/257 (36%), Positives = 134/257 (52%), Gaps = 6/257 (2%)
Frame = +3
Query: 3 RWKVAICGEYMKSKFKTCSHGTACNFIHCFRNPGGDYEWADWDNPPPKYWIKRMIALFGT 182
RWKVAICGE+MKS+ KTCSHG+ACNFIHCFRNPGGDYEWADWD PPP++W+K+M +LFG
Sbjct: 97 RWKVAICGEFMKSRLKTCSHGSACNFIHCFRNPGGDYEWADWDRPPPRFWVKKMASLFGY 156
Query: 183 STECQYDKLVDYRESERFRRSDRTPSKKRFHSRRSDSGGSPTKESDTTRDPYSHSSIRRE 362
S E Y+K +T +K +R S + T D H +RR
Sbjct: 157 SAESSYEK--------------QTVEEKLRQTRMS--------SNMLTADRDRHDRMRR- 193
Query: 363 QFSSRREEYAALTEKHDRDRGHGKFVKSGRTRNCDSAEGNYKENNRVSLKNHHKYEDNYY 542
S R+ A+ H F + R+ +G+ + R S ++ + D
Sbjct: 194 --SRSRDMDCAIHSSHKSGDIEDDFPEVTHWRSHSKDDGS-NSDGRQSDRDTERDRDR-- 248
Query: 543 DDQERHKMKHKEYSLRRKRGKNY------SIEYAENKSRFHEKGDVQSSDYTDDDRQFSD 704
D++R + +H ++ RKR K++ S +Y EN SR HE + ++ +DD R
Sbjct: 249 -DRDRERYRHHYHA--RKRSKHHSKVSERSTDYGENNSRSHE---IDQNELSDDGR---- 298
Query: 705 DQSTSLSGEKSSHKDTF 755
++ KSS + TF
Sbjct: 299 NRHKHFGSTKSSGRRTF 315
>ref|XP_004230418.1| PREDICTED: zinc finger CCCH domain-containing protein 5-like [Solanum
lycopersicum]
Length = 786
Score = 151 bits (382), Expect = 2e-34
Identities = 85/256 (33%), Positives = 139/256 (54%), Gaps = 13/256 (5%)
Frame = +3
Query: 3 RWKVAICGEYMKSKFKTCSHGTACNFIHCFRNPGGDYEWADWDNPPPKYWIKRMIALFGT 182
+WKVAICGE++KSK K+CS GTACNFIHCFRNPGGDYEWAD D PPP+YW+ +M ALFG
Sbjct: 364 KWKVAICGEFVKSKLKSCSRGTACNFIHCFRNPGGDYEWADLDKPPPRYWLTKMAALFGY 423
Query: 183 STECQYDKLVDYRESERFRRSDRT----PSKKRFHSRRSDSGGSPTKESDTTRDPYS-HS 347
+ E YD+ ++ + S+R S +T + R+ SR S ++ S D Y H
Sbjct: 424 ADESVYDRRLEQKNSKRMLNSYKTLASDSDRHRYDSRERRSRSRESRSSRIHYDDYDFHK 483
Query: 348 SIRREQFSSRREEYAALTEKHDRDRGHGKFVKS----GRTR-NCDSAEGNYKENNRVSLK 512
I +E+ ++ + +K + G G+ + G+ R + ++ + + + +K
Sbjct: 484 RIHQERGDRTDKKQRKILDKKQFEEGTGQHEEETNQHGKNRYHSSDSDWDLSDREKEGVK 543
Query: 513 NHH---KYEDNYYDDQERHKMKHKEYSLRRKRGKNYSIEYAENKSRFHEKGDVQSSDYTD 683
HH + N+++ E+ ++H+ ++++ + S + K R+ GD S +
Sbjct: 544 RHHSTGRKSRNHHN--EKMGLQHRNDHIKKRVSGSDSGDDLLEKKRY---GDAGSGNSEK 598
Query: 684 DDRQFSDDQSTSLSGE 731
R +D++T S E
Sbjct: 599 GSRHSKEDRNTDSSSE 614
>ref|XP_006836876.1| hypothetical protein AMTR_s00099p00102890 [Amborella trichopoda]
gi|548839440|gb|ERM99729.1| hypothetical protein
AMTR_s00099p00102890 [Amborella trichopoda]
Length = 760
Score = 149 bits (377), Expect = 8e-34
Identities = 89/219 (40%), Positives = 117/219 (53%), Gaps = 36/219 (16%)
Frame = +3
Query: 3 RWKVAICGEYMKSKFKTCSHGTACNFIHCFRNPGGDYEWADWDNPPPKYWIKRMIALFGT 182
RWKVAICGEYMKS+ KTCS G+ACNFIHCF NPGGDYEWADWD+ PP+YWIK+M ALFG
Sbjct: 334 RWKVAICGEYMKSRHKTCSRGSACNFIHCFCNPGGDYEWADWDSQPPRYWIKKMEALFGP 393
Query: 183 S---TECQYDKLVDYRESERFRRSDRTPSKKRFHSRRSDS------------------GG 299
S E QYDK + + S + S+ T R+HS RS S G
Sbjct: 394 SLYWEELQYDKHSELQRSSSRKTSNETSVTCRYHSSRSKSRDAARWSNESDADFERKRGS 453
Query: 300 SPTKES---DTTRDPYSHSSIR-----REQFSSRREEYAALTEKHDRDRGHGKFVKSGRT 455
+P+++ D R+ +HS R +SR + + A D D G+ +K G T
Sbjct: 454 TPSRDGAGYDKRRERLNHSRSRIMSTVNGSRTSRFKSHEAAQWSDDSDEGYE--IKQGST 511
Query: 456 RNCDSAEGNYKENNR-------VSLKNHHKYEDNYYDDQ 551
+ D E + +E R S+K +E + + DQ
Sbjct: 512 PSRDETEYDTRERRRHSSTRRMSSVKESKSHETDRWSDQ 550