BLASTX nr result
ID: Zingiber25_contig00026950
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00026950
(856 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III s... 120 5e-25
emb|CBI17549.3| unnamed protein product [Vitis vinifera] 120 5e-25
ref|XP_004149158.1| PREDICTED: DNA-directed RNA polymerase III s... 120 6e-25
ref|XP_004164787.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 119 1e-24
ref|XP_006425717.1| hypothetical protein CICLE_v10025048mg [Citr... 112 1e-22
ref|XP_002310208.2| hypothetical protein POPTR_0007s12540g [Popu... 109 1e-21
ref|XP_004245771.1| PREDICTED: DNA-directed RNA polymerase III s... 101 3e-19
ref|NP_199764.1| SIN-like protein [Arabidopsis thaliana] gi|1017... 101 4e-19
ref|XP_006395054.1| hypothetical protein EUTSA_v10003751mg [Eutr... 100 7e-19
ref|XP_002863995.1| hypothetical protein ARALYDRAFT_495012 [Arab... 99 1e-18
ref|XP_006366085.1| PREDICTED: uncharacterized protein LOC102595... 99 2e-18
ref|XP_006366082.1| PREDICTED: uncharacterized protein LOC102595... 99 2e-18
ref|XP_006355443.1| PREDICTED: DNA-directed RNA polymerase III s... 99 2e-18
ref|XP_006355442.1| PREDICTED: DNA-directed RNA polymerase III s... 99 2e-18
ref|XP_006355441.1| PREDICTED: DNA-directed RNA polymerase III s... 99 2e-18
gb|ESW29064.1| hypothetical protein PHAVU_002G0404001g, partial ... 97 1e-17
gb|EOX91148.1| SIN-like family protein, putative isoform 1 [Theo... 96 1e-17
ref|XP_003611964.1| DNA-directed RNA polymerase III subunit RPC5... 96 1e-17
ref|XP_003589437.1| hypothetical protein MTR_1g024320 [Medicago ... 96 1e-17
ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricin... 95 4e-17
>ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Vitis
vinifera]
Length = 672
Score = 120 bits (302), Expect = 5e-25
Identities = 79/243 (32%), Positives = 120/243 (49%), Gaps = 10/243 (4%)
Frame = -3
Query: 854 ERRILKHWKFIKSTDIVFIRNNPKIVDDQEKAWLACWNNIKKSV---GEKMHVPVPSGKR 684
ER + WKF + TD+ F++ +P IV +Q + W + I + G + V SGK
Sbjct: 429 ERPSFRDWKFKEPTDVSFMKLHPDIVREQRRVWESLEKQITDIIHGGGRRGPVTKNSGKP 488
Query: 683 VKIADDVHESKDKAVNTAVS-------SLSSETQEHLLKILQKFFKDKKIRSINSVVNEL 525
+K A + ++S+ET+E L K L++ F+ K+ S + L
Sbjct: 489 SIANKTGTSTKSDGATRATNGTPVRRTAMSAETREALPKALEEVFRLHKVCSFQLICQAL 548
Query: 524 RGLAISNSSRPREDPKXXXXXXXXXXXXXXXXSELQSIVSQIAVDVHGTYVLKSTGSSXX 345
R LA+S S+ P+ DP+ EL +I+S+ A VHG YV K++ S
Sbjct: 549 RDLAVSKSTSPKVDPRTFVAAAYGADAPQE---ELHAIISKYATTVHGVYVWKTSEHSEH 605
Query: 344 XXXXXXXXXLFRGKEPKAKLNKQEVRMAAKARLQKDINDSDYNQVMRDLCDSSKGSWALK 165
LF GKEP AKL + ++ AAK L+K+I +YN+V+ +LC+S W LK
Sbjct: 606 NPLRKVVVDLFCGKEPNAKLKRADIMEAAKIALKKEITTHEYNKVVSELCESRGSLWVLK 665
Query: 164 SGD 156
SGD
Sbjct: 666 SGD 668
>emb|CBI17549.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 120 bits (302), Expect = 5e-25
Identities = 79/243 (32%), Positives = 120/243 (49%), Gaps = 10/243 (4%)
Frame = -3
Query: 854 ERRILKHWKFIKSTDIVFIRNNPKIVDDQEKAWLACWNNIKKSV---GEKMHVPVPSGKR 684
ER + WKF + TD+ F++ +P IV +Q + W + I + G + V SGK
Sbjct: 445 ERPSFRDWKFKEPTDVSFMKLHPDIVREQRRVWESLEKQITDIIHGGGRRGPVTKNSGKP 504
Query: 683 VKIADDVHESKDKAVNTAVS-------SLSSETQEHLLKILQKFFKDKKIRSINSVVNEL 525
+K A + ++S+ET+E L K L++ F+ K+ S + L
Sbjct: 505 SIANKTGTSTKSDGATRATNGTPVRRTAMSAETREALPKALEEVFRLHKVCSFQLICQAL 564
Query: 524 RGLAISNSSRPREDPKXXXXXXXXXXXXXXXXSELQSIVSQIAVDVHGTYVLKSTGSSXX 345
R LA+S S+ P+ DP+ EL +I+S+ A VHG YV K++ S
Sbjct: 565 RDLAVSKSTSPKVDPRTFVAAAYGADAPQE---ELHAIISKYATTVHGVYVWKTSEHSEH 621
Query: 344 XXXXXXXXXLFRGKEPKAKLNKQEVRMAAKARLQKDINDSDYNQVMRDLCDSSKGSWALK 165
LF GKEP AKL + ++ AAK L+K+I +YN+V+ +LC+S W LK
Sbjct: 622 NPLRKVVVDLFCGKEPNAKLKRADIMEAAKIALKKEITTHEYNKVVSELCESRGSLWVLK 681
Query: 164 SGD 156
SGD
Sbjct: 682 SGD 684
>ref|XP_004149158.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Cucumis
sativus]
Length = 702
Score = 120 bits (301), Expect = 6e-25
Identities = 80/248 (32%), Positives = 120/248 (48%), Gaps = 15/248 (6%)
Frame = -3
Query: 854 ERRILKHWKFIKSTDIVFIRNNPKIVDDQEKAWLACWNNIKK------SVGEKMHVPVPS 693
ER K WKF + TD +F+ N+ +I + QE+ W NN++K S+ H +
Sbjct: 458 ERPAFKDWKFKEKTDRLFLSNHVRIAEKQEELW----NNVEKGFTFLRSIKSVHHANAAT 513
Query: 692 GKRVKI--------ADDVHESKDKAVNTAVSSLSSETQEHLLKILQKFFKDKKIRSINSV 537
GK + +D A ++S ET+E L K LQK F++ K+ S +
Sbjct: 514 GKPGVVPKLEKQVSSDQTTTKSSNAPLNRKGAMSDETREALPKALQKLFQNHKVCSFQLI 573
Query: 536 VNELRGLAISNSSRPREDPKXXXXXXXXXXXXXXXXSELQSIVSQIAVDVHGTYVLKSTG 357
LR LA+S S+ P+ D + EL+ I+SQ+A ++HG YVL S+
Sbjct: 574 CQGLRDLAVSQSTLPKADARMAVAAAYGVDAPPD---ELKKIISQVATEIHGLYVLTSSP 630
Query: 356 SSXXXXXXXXXXXLF-RGKEPKAKLNKQEVRMAAKARLQKDINDSDYNQVMRDLCDSSKG 180
RG+ PKA L K +V A+K L + IN ++Y++VM ++C S
Sbjct: 631 EHPEYDPLRKVVIQLLRGRGPKAVLKKADVLEASKHELGRAINSNEYSKVMNEICISHGS 690
Query: 179 SWALKSGD 156
SW LKSGD
Sbjct: 691 SWTLKSGD 698
>ref|XP_004164787.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III
subunit RPC5-like [Cucumis sativus]
Length = 702
Score = 119 bits (299), Expect = 1e-24
Identities = 80/248 (32%), Positives = 119/248 (47%), Gaps = 15/248 (6%)
Frame = -3
Query: 854 ERRILKHWKFIKSTDIVFIRNNPKIVDDQEKAWLACWNNIKK------SVGEKMHVPVPS 693
ER K WKF + TD +F+ N+ +I + QE+ W NN++K S+ H +
Sbjct: 458 ERPAFKDWKFKEKTDRLFLSNHVRIAEKQEELW----NNVEKGFTFLRSIKSVHHANAAT 513
Query: 692 GKRVKI--------ADDVHESKDKAVNTAVSSLSSETQEHLLKILQKFFKDKKIRSINSV 537
GK + +D A ++S ET+E L K LQK F++ K+ S +
Sbjct: 514 GKPGVVPKLEKQVSSDQTTTKSSNAPLNRKGAMSDETREALPKALQKLFQNHKVCSFQLI 573
Query: 536 VNELRGLAISNSSRPREDPKXXXXXXXXXXXXXXXXSELQSIVSQIAVDVHGTYVLKSTG 357
LR LA+S S+ P+ D + EL I+SQ+A ++HG YVL S+
Sbjct: 574 CQGLRDLAVSQSTLPKADARMAVAAAYGVDAPPD---ELXKIISQVATEIHGLYVLTSSP 630
Query: 356 SSXXXXXXXXXXXLF-RGKEPKAKLNKQEVRMAAKARLQKDINDSDYNQVMRDLCDSSKG 180
RG+ PKA L K +V A+K L + IN ++Y++VM ++C S
Sbjct: 631 EHPEYDPLRKVVIQLLRGRGPKAVLKKADVLEASKHELGRAINSNEYSKVMNEICISHGS 690
Query: 179 SWALKSGD 156
SW LKSGD
Sbjct: 691 SWTLKSGD 698
>ref|XP_006425717.1| hypothetical protein CICLE_v10025048mg [Citrus clementina]
gi|568824759|ref|XP_006466762.1| PREDICTED: DNA-directed
RNA polymerase III subunit RPC5-like [Citrus sinensis]
gi|557527707|gb|ESR38957.1| hypothetical protein
CICLE_v10025048mg [Citrus clementina]
Length = 690
Score = 112 bits (281), Expect = 1e-22
Identities = 77/244 (31%), Positives = 123/244 (50%), Gaps = 14/244 (5%)
Frame = -3
Query: 854 ERRILKHWKFIKSTDIVFIRNNPKIVDDQEKAWLACWNNIKKSVGEKMHVPVPSGKRVKI 675
ER K WKF + TD+ FI+ +P IV QE+ W A +K + + ++ SG ++
Sbjct: 450 ERPDFKDWKFRQQTDLSFIKEHPNIVIKQEQVWAAA----EKQITDVINKLGKSGSTLR- 504
Query: 674 ADDVHESKD-----KAVN---------TAVSSLSSETQEHLLKILQKFFKDKKIRSINSV 537
+D +S KA+N T +LS+E++E L K LQK F+ K+ S+ +
Sbjct: 505 -NDAGKSAMVNKHLKAINSSNGPSGALTGNKNLSNESREALPKALQKLFQIHKVCSLPLI 563
Query: 536 VNELRGLAISNSSRPREDPKXXXXXXXXXXXXXXXXSELQSIVSQIAVDVHGTYVLKSTG 357
LR LAIS S+ P+ D + E ++SQ+A ++HG YV KS+
Sbjct: 564 KQGLRDLAISQSTLPKADARMTVLAAEIVDSSFVDTQEFAEVISQVATNIHGFYVSKSSE 623
Query: 356 SSXXXXXXXXXXXLFRGKEPKAKLNKQEVRMAAKARLQKDINDSDYNQVMRDLCDSSKGS 177
L P AKL K +V AA+ L+++I++++Y++VM D+C+S +
Sbjct: 624 DPQHGPLRKVVTDLLLAGGPDAKLKKADVVEAARHVLKREISNAEYSKVMSDICESKGSA 683
Query: 176 WALK 165
W LK
Sbjct: 684 WILK 687
>ref|XP_002310208.2| hypothetical protein POPTR_0007s12540g [Populus trichocarpa]
gi|550334731|gb|EEE90658.2| hypothetical protein
POPTR_0007s12540g [Populus trichocarpa]
Length = 667
Score = 109 bits (272), Expect = 1e-21
Identities = 74/237 (31%), Positives = 112/237 (47%), Gaps = 4/237 (1%)
Frame = -3
Query: 854 ERRILKHWKFIKSTDIVFIRNNPKIVDDQEKAWLACWNNIKKSVGEKMHVPVPSGKRVKI 675
ER K WKF ++ D +F+ P IV QE+AW NI + +GK V
Sbjct: 446 ERPSFKDWKFKENVDTLFVELYPDIVRKQEQAWEVMGKNISAAFDR-------AGKSVS- 497
Query: 674 ADDVHESKDKAVNTAVSSLSSETQEHLLKILQKFFKDKKI--RSINSVVNELRGLAISNS 501
+ +++ ET+E L K L K + K+ + LR LAIS S
Sbjct: 498 --------KNVITKPKKTMTDETREALRKALPKVLQTHKVCRYGFQMICQGLRQLAISQS 549
Query: 500 SRPREDPKXXXXXXXXXXXXXXXXSELQSIVSQIAVDVHGTYVLKSTGS--SXXXXXXXX 327
+ P+ DP+ ELQ ++S++A ++HG YVLKS+
Sbjct: 550 TLPKADPRIAVAAASGAEAPPE---ELQEVISEVATNIHGFYVLKSSPEHPDFDPLSRKV 606
Query: 326 XXXLFRGKEPKAKLNKQEVRMAAKARLQKDINDSDYNQVMRDLCDSSKGSWALKSGD 156
LF + P A + K EV+ AA+ L+++ ++S+Y +VM DLC+S +W LKSGD
Sbjct: 607 VIGLFLARGPNANIKKSEVQAAARLELKREPSNSEYIKVMTDLCESKGSAWVLKSGD 663
>ref|XP_004245771.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Solanum
lycopersicum]
Length = 669
Score = 101 bits (252), Expect = 3e-19
Identities = 71/245 (28%), Positives = 122/245 (49%), Gaps = 12/245 (4%)
Frame = -3
Query: 854 ERRILKHWKFIKSTDIVFIRNNPKIVDDQEKAWLACWNNIKKSVGEKMHVPVPSGK-RVK 678
ER L WK + D F +V +Q+ W + +G++++ +P G+ R
Sbjct: 431 ERPDLNDWKLKEHPDKKFENLYGDVVREQQATW--------ECLGKQINDVLPGGRTRPT 482
Query: 677 IADDVHE--------SKDKAVNTAV--SSLSSETQEHLLKILQKFFKDKKIRSINSVVNE 528
+ + ++ S DK ++++ +S+S E +E L K LQ+ F+ K+ S +
Sbjct: 483 MKNPINRNADITALPSGDKPTSSSLLRTSMSEEIREALPKALQEVFRTYKVCSFQQIRQG 542
Query: 527 LRGLAISNSSRPREDPKXXXXXXXXXXXXXXXXSELQSIVSQIAVDVHGTYVLKSTGSSX 348
LR L +S S P+ P+ E+Q++++Q+AV++HG YVLKS+ +
Sbjct: 543 LRKLGVSKSYPPKGAPRKAITASVDVFDAPQE--EIQAVINQVAVNIHGVYVLKSSPDNP 600
Query: 347 XXXXXXXXXXL-FRGKEPKAKLNKQEVRMAAKARLQKDINDSDYNQVMRDLCDSSKGSWA 171
F + P AKL K V AAK +L +DI + ++ +VM++LC S K +W
Sbjct: 601 QYDTLRKIVIDLFMAEGPSAKLKKASVTEAAKLQLNRDITNVEFLKVMKELCHSEKSAWV 660
Query: 170 LKSGD 156
L+SGD
Sbjct: 661 LRSGD 665
>ref|NP_199764.1| SIN-like protein [Arabidopsis thaliana] gi|10177619|dbj|BAB10766.1|
unnamed protein product [Arabidopsis thaliana]
gi|332008443|gb|AED95826.1| SIN-like protein [Arabidopsis
thaliana]
Length = 689
Score = 101 bits (251), Expect = 4e-19
Identities = 65/247 (26%), Positives = 112/247 (45%), Gaps = 17/247 (6%)
Frame = -3
Query: 854 ERRILKHWKFIKSTDIVFIRNNPKIVDDQEKAWLACWNNIKKS----------------V 723
ER +LK WKF + TD+ FI++ P+IV +Q+ W N+K V
Sbjct: 443 ERHVLKDWKFKEPTDVSFIKSYPEIVKEQDIFWTDKRENLKSRITAQGGKSRADKRRNVV 502
Query: 722 GEKMHVPVPSGKRVKIADDVHESKDKAVNTAVSSLSSETQEHLLKILQKFFKDKKIRSIN 543
G V V ++D SK+ + E ++ L K L+K F+ K+
Sbjct: 503 GTSSSVTVKPEVPTTLSDKGGSSKNTIHRVVTQEMPEELKKALPKALKKVFQTHKVCRYE 562
Query: 542 SVVNELRGLAISNSSRPREDPKXXXXXXXXXXXXXXXXSELQSIVSQIAVDVHGTYV-LK 366
++ LR LA+S S+ P+ D EL+ +++ +A ++HG+YV +
Sbjct: 563 TICQGLRDLAVSTSNNPKAD---SGMAVNVALAVDAYQGELEDVINGVATNIHGSYVSIS 619
Query: 365 STGSSXXXXXXXXXXXLFRGKEPKAKLNKQEVRMAAKARLQKDINDSDYNQVMRDLCDSS 186
S L G P KL K EV A + +L+++I +++Y +VM ++C+++
Sbjct: 620 SPDHPEYDSLREVVISLLTGSPPGTKLMKAEVFAAGRTKLEREITNNEYIKVMHEICETN 679
Query: 185 KGSWALK 165
W L+
Sbjct: 680 SSGWVLQ 686
>ref|XP_006395054.1| hypothetical protein EUTSA_v10003751mg [Eutrema salsugineum]
gi|557091693|gb|ESQ32340.1| hypothetical protein
EUTSA_v10003751mg [Eutrema salsugineum]
Length = 682
Score = 100 bits (249), Expect = 7e-19
Identities = 68/246 (27%), Positives = 112/246 (45%), Gaps = 16/246 (6%)
Frame = -3
Query: 854 ERRILKHWKFIKSTDIVFIRNNPKIVDDQEKAWLAC---------------WNNIKKSVG 720
ER +L WKF + D+ FI++ +I + QE W A +N++ VG
Sbjct: 437 ERPLLCDWKFKEPADVSFIKSYKEIANKQEIFWKALDEKLTPKITQGGKSRADNLRNGVG 496
Query: 719 EKMHVPVPSGKRVKIADDVHESKDKAVNTAVSSLSSETQEHLLKILQKFFKDKKIRSINS 540
+ V ++D S++ +S + + +LK L+K F+ K+ S +
Sbjct: 497 KNPSGTVKPEIPTTLSDKGGSSRNAIHRFVGQKMSEDIRRAILKALKKVFQSHKVCSYET 556
Query: 539 VVNELRGLAISNSSRPREDPKXXXXXXXXXXXXXXXXSELQSIVSQIAVDVHGTYVLK-S 363
+ LR LA+S S+ P+ D ELQ I+S++ VD+HG++V K S
Sbjct: 557 ICQRLRDLAVSTSNNPKADS---GMAQQVALAVDAHKEELQQIISEVTVDIHGSFVYKLS 613
Query: 362 TGSSXXXXXXXXXXXLFRGKEPKAKLNKQEVRMAAKARLQKDINDSDYNQVMRDLCDSSK 183
L G P AKL + +V +A + L++ I ++Y +VM DLC+SS
Sbjct: 614 PDHPEHDPLRSVVIDLLLGNSPGAKLMRADVFVAGETVLRRKITSNEYQKVMHDLCESSS 673
Query: 182 GSWALK 165
W L+
Sbjct: 674 SGWVLQ 679
>ref|XP_002863995.1| hypothetical protein ARALYDRAFT_495012 [Arabidopsis lyrata subsp.
lyrata] gi|297309830|gb|EFH40254.1| hypothetical protein
ARALYDRAFT_495012 [Arabidopsis lyrata subsp. lyrata]
Length = 676
Score = 99.4 bits (246), Expect = 1e-18
Identities = 67/245 (27%), Positives = 113/245 (46%), Gaps = 15/245 (6%)
Frame = -3
Query: 854 ERRILKHWKFIKSTDIVFIRNNPKIVDDQEKAWL--------------ACWNNIKKSVGE 717
ER +L WKF + TD+ FI++ P+IV +Q+ W + +N + VG+
Sbjct: 432 ERPLLNDWKFKEPTDVSFIKSYPEIVKEQDILWTNRKKIIESILTTRKSRADNRRNVVGK 491
Query: 716 KMHVPVPSGKRVKIADDVHESKDKAVNTAVSSLSSETQEHLLKILQKFFKDKKIRSINSV 537
V V ++D S++ + E + L K L+K F+ K+ ++
Sbjct: 492 NSSVTVKPEVPTTLSDKGGSSRNTIPRVVGQKMPEELRWALPKALKKVFQTHKVCRYETI 551
Query: 536 VNELRGLAISNSSRPREDPKXXXXXXXXXXXXXXXXSELQSIVSQIAVDVHGTYV-LKST 360
LR LA+S S+ P+ D EL+ ++S++A ++HG+YV + S
Sbjct: 552 CQGLRDLAVSTSNNPKADS---GMAVNVALAVDAYQDELKDVISEVAANIHGSYVSISSP 608
Query: 359 GSSXXXXXXXXXXXLFRGKEPKAKLNKQEVRMAAKARLQKDINDSDYNQVMRDLCDSSKG 180
LF G P AKL K EV A + L ++I +++Y +VM DLC+++
Sbjct: 609 DHPEYDSLRGVVISLFCGTGPGAKLMKAEVFAAGRNELNREITNNEYIKVMHDLCETNSS 668
Query: 179 SWALK 165
W L+
Sbjct: 669 GWVLQ 673
>ref|XP_006366085.1| PREDICTED: uncharacterized protein LOC102595101 isoform X4 [Solanum
tuberosum] gi|565401172|ref|XP_006366086.1| PREDICTED:
uncharacterized protein LOC102595101 isoform X5 [Solanum
tuberosum] gi|565401174|ref|XP_006366087.1| PREDICTED:
uncharacterized protein LOC102595101 isoform X6 [Solanum
tuberosum]
Length = 387
Score = 99.0 bits (245), Expect = 2e-18
Identities = 70/237 (29%), Positives = 112/237 (47%), Gaps = 4/237 (1%)
Frame = -3
Query: 854 ERRILKHWKFIKSTDIVFIRNNPKIVDDQEKAWLACWNNIKKSVGEKMHVPVPSGKRVKI 675
ER L WK + D F +V +++ W I + + P
Sbjct: 149 ERPDLNDWKLKEHPDKKFENLYGDVVREKQATWECLGKQINDVLPGGRNRPTMKNPLNPN 208
Query: 674 AD-DVHESKDKAVNTAV--SSLSSETQEHLLKILQKFFKDKKIRSINSVVNELRGLAISN 504
AD S DK ++++ +S+S E +E L K LQ+ F+ K+ S + LR L +S
Sbjct: 209 ADIPALPSGDKPTSSSLLRTSMSEEIREALPKALQEVFRTYKVCSFQQIRQGLRKLGVSK 268
Query: 503 SSRPREDPKXXXXXXXXXXXXXXXXSELQSIVSQIAVDVHGTYVLKSTGSSXXXXXXXXX 324
S P+ P+ E+Q++++Q+AV++HG YVLKS+ +
Sbjct: 269 SYPPKGAPRKAITASIDVFDAPQE--EIQAVINQVAVNIHGVYVLKSSPDNPQYDTLRKV 326
Query: 323 XXL-FRGKEPKAKLNKQEVRMAAKARLQKDINDSDYNQVMRDLCDSSKGSWALKSGD 156
F + P AKL K V AAK +L +DI + ++ +VM++LC S K +W L+SGD
Sbjct: 327 VIDLFMAEGPSAKLKKASVTEAAKLQLNRDITNVEFLKVMKELCHSEKSAWVLRSGD 383
>ref|XP_006366082.1| PREDICTED: uncharacterized protein LOC102595101 isoform X1 [Solanum
tuberosum] gi|565401166|ref|XP_006366083.1| PREDICTED:
uncharacterized protein LOC102595101 isoform X2 [Solanum
tuberosum] gi|565401168|ref|XP_006366084.1| PREDICTED:
uncharacterized protein LOC102595101 isoform X3 [Solanum
tuberosum]
Length = 426
Score = 99.0 bits (245), Expect = 2e-18
Identities = 70/237 (29%), Positives = 112/237 (47%), Gaps = 4/237 (1%)
Frame = -3
Query: 854 ERRILKHWKFIKSTDIVFIRNNPKIVDDQEKAWLACWNNIKKSVGEKMHVPVPSGKRVKI 675
ER L WK + D F +V +++ W I + + P
Sbjct: 188 ERPDLNDWKLKEHPDKKFENLYGDVVREKQATWECLGKQINDVLPGGRNRPTMKNPLNPN 247
Query: 674 AD-DVHESKDKAVNTAV--SSLSSETQEHLLKILQKFFKDKKIRSINSVVNELRGLAISN 504
AD S DK ++++ +S+S E +E L K LQ+ F+ K+ S + LR L +S
Sbjct: 248 ADIPALPSGDKPTSSSLLRTSMSEEIREALPKALQEVFRTYKVCSFQQIRQGLRKLGVSK 307
Query: 503 SSRPREDPKXXXXXXXXXXXXXXXXSELQSIVSQIAVDVHGTYVLKSTGSSXXXXXXXXX 324
S P+ P+ E+Q++++Q+AV++HG YVLKS+ +
Sbjct: 308 SYPPKGAPRKAITASIDVFDAPQE--EIQAVINQVAVNIHGVYVLKSSPDNPQYDTLRKV 365
Query: 323 XXL-FRGKEPKAKLNKQEVRMAAKARLQKDINDSDYNQVMRDLCDSSKGSWALKSGD 156
F + P AKL K V AAK +L +DI + ++ +VM++LC S K +W L+SGD
Sbjct: 366 VIDLFMAEGPSAKLKKASVTEAAKLQLNRDITNVEFLKVMKELCHSEKSAWVLRSGD 422
>ref|XP_006355443.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform
X3 [Solanum tuberosum]
Length = 577
Score = 99.0 bits (245), Expect = 2e-18
Identities = 70/237 (29%), Positives = 112/237 (47%), Gaps = 4/237 (1%)
Frame = -3
Query: 854 ERRILKHWKFIKSTDIVFIRNNPKIVDDQEKAWLACWNNIKKSVGEKMHVPVPSGKRVKI 675
ER L WK + D F +V +++ W I + + P
Sbjct: 339 ERPDLNDWKLKEHPDKKFENLYGDVVREKQATWECLGKQINDVLPGGRNRPTMKNPLNPN 398
Query: 674 AD-DVHESKDKAVNTAV--SSLSSETQEHLLKILQKFFKDKKIRSINSVVNELRGLAISN 504
AD S DK ++++ +S+S E +E L K LQ+ F+ K+ S + LR L +S
Sbjct: 399 ADIPALPSGDKPTSSSLLRTSMSEEIREALPKALQEVFRTYKVCSFQQIRQGLRKLGVSK 458
Query: 503 SSRPREDPKXXXXXXXXXXXXXXXXSELQSIVSQIAVDVHGTYVLKSTGSSXXXXXXXXX 324
S P+ P+ E+Q++++Q+AV++HG YVLKS+ +
Sbjct: 459 SYPPKGAPRKAITASIDVFDAPQE--EIQAVINQVAVNIHGVYVLKSSPDNPQYDTLRKV 516
Query: 323 XXL-FRGKEPKAKLNKQEVRMAAKARLQKDINDSDYNQVMRDLCDSSKGSWALKSGD 156
F + P AKL K V AAK +L +DI + ++ +VM++LC S K +W L+SGD
Sbjct: 517 VIDLFMAEGPSAKLKKASVTEAAKLQLNRDITNVEFLKVMKELCHSEKSAWVLRSGD 573
>ref|XP_006355442.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform
X2 [Solanum tuberosum]
Length = 657
Score = 99.0 bits (245), Expect = 2e-18
Identities = 70/237 (29%), Positives = 112/237 (47%), Gaps = 4/237 (1%)
Frame = -3
Query: 854 ERRILKHWKFIKSTDIVFIRNNPKIVDDQEKAWLACWNNIKKSVGEKMHVPVPSGKRVKI 675
ER L WK + D F +V +++ W I + + P
Sbjct: 419 ERPDLNDWKLKEHPDKKFENLYGDVVREKQATWECLGKQINDVLPGGRNRPTMKNPLNPN 478
Query: 674 AD-DVHESKDKAVNTAV--SSLSSETQEHLLKILQKFFKDKKIRSINSVVNELRGLAISN 504
AD S DK ++++ +S+S E +E L K LQ+ F+ K+ S + LR L +S
Sbjct: 479 ADIPALPSGDKPTSSSLLRTSMSEEIREALPKALQEVFRTYKVCSFQQIRQGLRKLGVSK 538
Query: 503 SSRPREDPKXXXXXXXXXXXXXXXXSELQSIVSQIAVDVHGTYVLKSTGSSXXXXXXXXX 324
S P+ P+ E+Q++++Q+AV++HG YVLKS+ +
Sbjct: 539 SYPPKGAPRKAITASIDVFDAPQE--EIQAVINQVAVNIHGVYVLKSSPDNPQYDTLRKV 596
Query: 323 XXL-FRGKEPKAKLNKQEVRMAAKARLQKDINDSDYNQVMRDLCDSSKGSWALKSGD 156
F + P AKL K V AAK +L +DI + ++ +VM++LC S K +W L+SGD
Sbjct: 597 VIDLFMAEGPSAKLKKASVTEAAKLQLNRDITNVEFLKVMKELCHSEKSAWVLRSGD 653
>ref|XP_006355441.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform
X1 [Solanum tuberosum]
Length = 669
Score = 99.0 bits (245), Expect = 2e-18
Identities = 70/237 (29%), Positives = 112/237 (47%), Gaps = 4/237 (1%)
Frame = -3
Query: 854 ERRILKHWKFIKSTDIVFIRNNPKIVDDQEKAWLACWNNIKKSVGEKMHVPVPSGKRVKI 675
ER L WK + D F +V +++ W I + + P
Sbjct: 431 ERPDLNDWKLKEHPDKKFENLYGDVVREKQATWECLGKQINDVLPGGRNRPTMKNPLNPN 490
Query: 674 AD-DVHESKDKAVNTAV--SSLSSETQEHLLKILQKFFKDKKIRSINSVVNELRGLAISN 504
AD S DK ++++ +S+S E +E L K LQ+ F+ K+ S + LR L +S
Sbjct: 491 ADIPALPSGDKPTSSSLLRTSMSEEIREALPKALQEVFRTYKVCSFQQIRQGLRKLGVSK 550
Query: 503 SSRPREDPKXXXXXXXXXXXXXXXXSELQSIVSQIAVDVHGTYVLKSTGSSXXXXXXXXX 324
S P+ P+ E+Q++++Q+AV++HG YVLKS+ +
Sbjct: 551 SYPPKGAPRKAITASIDVFDAPQE--EIQAVINQVAVNIHGVYVLKSSPDNPQYDTLRKV 608
Query: 323 XXL-FRGKEPKAKLNKQEVRMAAKARLQKDINDSDYNQVMRDLCDSSKGSWALKSGD 156
F + P AKL K V AAK +L +DI + ++ +VM++LC S K +W L+SGD
Sbjct: 609 VIDLFMAEGPSAKLKKASVTEAAKLQLNRDITNVEFLKVMKELCHSEKSAWVLRSGD 665
>gb|ESW29064.1| hypothetical protein PHAVU_002G0404001g, partial [Phaseolus
vulgaris]
Length = 341
Score = 96.7 bits (239), Expect = 1e-17
Identities = 66/237 (27%), Positives = 114/237 (48%), Gaps = 10/237 (4%)
Frame = -3
Query: 836 HWKFIKSTDIVFIRNNPKIVDDQEKAWLACWNNI--------KKSVGEKMHVP--VPSGK 687
+WKF + D F + P IV+ QEK + ++ K+ +G+ V +
Sbjct: 107 YWKFKELPDESFKKLYPDIVEKQEKLFKGLEQHLPGLVSNVGKRKIGKSAVATQGVNNDA 166
Query: 686 RVKIADDVHESKDKAVNTAVSSLSSETQEHLLKILQKFFKDKKIRSINSVVNELRGLAIS 507
++ D + V+T ++S+ET+ L L+K F+ K+ S + LR +A+S
Sbjct: 167 LKSVSSDQRPTSLAGVSTGKMTMSNETRHALPIALKKLFQTNKVCSFKVICQGLREMAVS 226
Query: 506 NSSRPREDPKXXXXXXXXXXXXXXXXSELQSIVSQIAVDVHGTYVLKSTGSSXXXXXXXX 327
+ + D K EL ++++++A ++HG YVLKS S
Sbjct: 227 KAMLSKGDSKIAVDAAHSLDGPHN---ELMAVINEVACEIHGYYVLKS---SQDDPFRDV 280
Query: 326 XXXLFRGKEPKAKLNKQEVRMAAKARLQKDINDSDYNQVMRDLCDSSKGSWALKSGD 156
+ RG P AKL K E+ AA+ +L +++ +++YN+VM +LC S W L+SGD
Sbjct: 281 VIDMLRGSGPNAKLKKAEIVEAARRKLGREVPNNEYNKVMSELCVSKGSVWVLRSGD 337
>gb|EOX91148.1| SIN-like family protein, putative isoform 1 [Theobroma cacao]
Length = 700
Score = 96.3 bits (238), Expect = 1e-17
Identities = 75/242 (30%), Positives = 117/242 (48%), Gaps = 9/242 (3%)
Frame = -3
Query: 854 ERRILKHWKFIKSTDIVFIRNNPKIVDDQEKAWLACWNNIKKSV--GEKMHVPVPSGKRV 681
ER K WK ++ D F + P IV +QE+ W A +N+ + G K P +
Sbjct: 461 ERPSFKDWKLKENADEGFKKLYPDIVKNQEQIWRAGEDNVINHICRGAKGG-PSRTKPGT 519
Query: 680 KIADDVHESKDKAVNT------AVSSLSSETQEHLLKILQKFFKDKKIRSINSVVNELRG 519
I + + DK V A ++S ET+E + K L+K F+ K+ S+ + LR
Sbjct: 520 VIKPEKAMNSDKGVRRVAPAVQAGRTMSDETREAIPKALKKVFQTHKVCSLQLIRKGLRD 579
Query: 518 LAISNSSRPREDPKXXXXXXXXXXXXXXXXSELQSIVSQIAVDVHG-TYVLKSTGSSXXX 342
LA+S S+ P+ D + ELQ +VS++AV++HG +VL+S S
Sbjct: 580 LALSQSTLPKADARMVVKAAYGADAPEH---ELQEVVSEVAVELHGGLFVLRS--SPEHP 634
Query: 341 XXXXXXXXLFRGKEPKAKLNKQEVRMAAKARLQKDINDSDYNQVMRDLCDSSKGSWALKS 162
+ K KL K +V AA L+++I++++YN+VM D C+ W LKS
Sbjct: 635 EYDPLREVVINLLRVKGKLKKADVSAAALLSLKREISNNEYNKVMSDFCEYKSSWWVLKS 694
Query: 161 GD 156
GD
Sbjct: 695 GD 696
>ref|XP_003611964.1| DNA-directed RNA polymerase III subunit RPC5 [Medicago truncatula]
gi|358344405|ref|XP_003636280.1| DNA-directed RNA
polymerase III subunit RPC5 [Medicago truncatula]
gi|355502215|gb|AES83418.1| DNA-directed RNA polymerase
III subunit RPC5 [Medicago truncatula]
gi|355513299|gb|AES94922.1| DNA-directed RNA polymerase
III subunit RPC5 [Medicago truncatula]
Length = 683
Score = 96.3 bits (238), Expect = 1e-17
Identities = 69/243 (28%), Positives = 111/243 (45%), Gaps = 16/243 (6%)
Frame = -3
Query: 836 HWKFIKSTDIVFIRNNPKIVDDQEKAWLACWNNIKKSVGEKMHVPVPSGKRVKIADDVHE 657
+WKF + D FI+ P +V QE+ + N + +G GKR + +
Sbjct: 449 YWKFKELPDESFIKEFPIVVKKQEEIFKILENEVNSIIGTL------GGKRKLKSAITNS 502
Query: 656 SKDKAVNTAVSS----------------LSSETQEHLLKILQKFFKDKKIRSINSVVNEL 525
+ A+ T+ +S +SSET+ L L+K F+ K+ S + EL
Sbjct: 503 GVNNALFTSTNSDPRATSLGEDPPRSMTMSSETRHALPIALKKLFQTHKVCSFQLICQEL 562
Query: 524 RGLAISNSSRPREDPKXXXXXXXXXXXXXXXXSELQSIVSQIAVDVHGTYVLKSTGSSXX 345
RGLA++ + P+ K EL++I+ ++A D+HG YVLKS +
Sbjct: 563 RGLALAQTMLPKGGSKMSVDAANSLDVPQD---ELKAILGEVACDIHGCYVLKSAQNDPF 619
Query: 344 XXXXXXXXXLFRGKEPKAKLNKQEVRMAAKARLQKDINDSDYNQVMRDLCDSSKGSWALK 165
RG P KL K E+ AA+ +L +D+ +++Y + + +LC S W LK
Sbjct: 620 RDVVIDM---LRGSGPNGKLKKAEILEAARRKLGRDVPNNEYIKAVSELCVSKGSFWVLK 676
Query: 164 SGD 156
SGD
Sbjct: 677 SGD 679
>ref|XP_003589437.1| hypothetical protein MTR_1g024320 [Medicago truncatula]
gi|355478485|gb|AES59688.1| hypothetical protein
MTR_1g024320 [Medicago truncatula]
Length = 406
Score = 96.3 bits (238), Expect = 1e-17
Identities = 69/243 (28%), Positives = 111/243 (45%), Gaps = 16/243 (6%)
Frame = -3
Query: 836 HWKFIKSTDIVFIRNNPKIVDDQEKAWLACWNNIKKSVGEKMHVPVPSGKRVKIADDVHE 657
+WKF + D FI+ P +V QE+ + N + +G GKR + +
Sbjct: 172 YWKFKELPDESFIKEFPIVVKKQEEIFKILENEVNSIIGTL------GGKRKLKSAITNS 225
Query: 656 SKDKAVNTAVSS----------------LSSETQEHLLKILQKFFKDKKIRSINSVVNEL 525
+ A+ T+ +S +SSET+ L L+K F+ K+ S + EL
Sbjct: 226 GVNNALFTSTNSDPRATSLGEDPPRSMTMSSETRHALPIALKKLFQTHKVCSFQLICQEL 285
Query: 524 RGLAISNSSRPREDPKXXXXXXXXXXXXXXXXSELQSIVSQIAVDVHGTYVLKSTGSSXX 345
RGLA++ + P+ K EL++I+ ++A D+HG YVLKS +
Sbjct: 286 RGLALAQTMLPKGGSKMSVDAANSLDVPQD---ELKAILGEVACDIHGCYVLKSAQNDPF 342
Query: 344 XXXXXXXXXLFRGKEPKAKLNKQEVRMAAKARLQKDINDSDYNQVMRDLCDSSKGSWALK 165
RG P KL K E+ AA+ +L +D+ +++Y + + +LC S W LK
Sbjct: 343 RDVVIDM---LRGSGPNGKLKKAEILEAARRKLGRDVPNNEYIKAVSELCVSKGSFWVLK 399
Query: 164 SGD 156
SGD
Sbjct: 400 SGD 402
>ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricinus communis]
gi|223535571|gb|EEF37239.1| DNA-directed RNA polymerase,
putative [Ricinus communis]
Length = 677
Score = 94.7 bits (234), Expect = 4e-17
Identities = 71/227 (31%), Positives = 105/227 (46%), Gaps = 12/227 (5%)
Frame = -3
Query: 854 ERRILKHWKFIKSTDIVFIRNNPKIVDDQEKAWLACWNNIKK------SVGEKMHVPVPS 693
ER K WKF + TD FI+ P IV QE+AW + K K +P P
Sbjct: 438 ERPSFKDWKFKEHTDTTFIKLYPDIVKKQEEAWDNTEKRLSKVFDRSGKASMKNAIPKPP 497
Query: 692 GKRVKIAD-DVHESKDKAVN----TAVSSLSSETQEHLLKILQKFFKDKKIRSINSVVNE 528
+ D +S K + ++++ ET+E LLK L K F+ K+ S +
Sbjct: 498 MVHNTVKHLDSEKSMPKIASGMRRLTKTTITVETREALLKALPKVFQSHKVCSFQLICQG 557
Query: 527 LRGLAISNSSRPREDPKXXXXXXXXXXXXXXXXSELQSIVSQIAVDVHGTYVLKSTGS-S 351
LR LA+S S+ P+ DP+ ELQ I+SQ+A ++HG YVLKS+
Sbjct: 558 LRDLAVSQSTLPKADPR---IAVAAASGADAPPEELQEIISQVATNIHGFYVLKSSPEHP 614
Query: 350 XXXXXXXXXXXLFRGKEPKAKLNKQEVRMAAKARLQKDINDSDYNQV 210
L + P AKL K EV AA+ ++D+ + +YN++
Sbjct: 615 QYDELRKVIIDLLLARGPNAKLKKAEVFEAARLAFKRDVTNIEYNKL 661