BLASTX nr result

ID: Zingiber25_contig00026940 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00026940
         (529 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25599.3| unnamed protein product [Vitis vinifera]               71   2e-10
ref|XP_002265494.1| PREDICTED: homeobox protein knotted-1-like 3...    71   2e-10
dbj|BAL46506.1| Knotted1-like homeobox protein [Diospyros kaki]        58   1e-06

>emb|CBI25599.3| unnamed protein product [Vitis vinifera]
          Length = 413

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 45/144 (31%), Positives = 61/144 (42%), Gaps = 7/144 (4%)
 Frame = -2

Query: 420 MAFHNNLAHELAMPQYAEQQLAAGGPAMLRTAMGQLGTGRPXXXXXXXXXXXXXXXGKDF 241
           MAFHN L+H++A+  + +  L      +      QLG                       
Sbjct: 1   MAFHNQLSHDMALQHFTDSHLTENTAVLRGILPEQLGQSSS------------------- 41

Query: 240 DRLMENAGKPAL-------AGGSGPTWLNSAILQQHGHGHYGDGSFLHLQTAPNASASPG 82
               + AGKP          GG GPTWLN+AIL+Q     Y DGSFLHLQT  ++++SP 
Sbjct: 42  ----DGAGKPPSHQQLGGGGGGGGPTWLNNAILRQQSQ--YADGSFLHLQTNSDSTSSPA 95

Query: 81  GRGVGDGQWFPRPSILRGGGGEEE 10
                  QW  R    +  GG  +
Sbjct: 96  TATTTTNQWLSRSMSNKRNGGNNQ 119


>ref|XP_002265494.1| PREDICTED: homeobox protein knotted-1-like 3 [Vitis vinifera]
          Length = 430

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 46/147 (31%), Positives = 64/147 (43%), Gaps = 7/147 (4%)
 Frame = -2

Query: 420 MAFHNNLAHELAMPQYAEQQLAAGGPAMLRTAMGQLGTGRPXXXXXXXXXXXXXXXGKDF 241
           MAFHN L+H++A+  + +  L      +      QLG                       
Sbjct: 1   MAFHNQLSHDMALQHFTDSHLTENTAVLRGILPEQLGQSSS------------------- 41

Query: 240 DRLMENAGKPAL-------AGGSGPTWLNSAILQQHGHGHYGDGSFLHLQTAPNASASPG 82
               + AGKP          GG GPTWLN+AIL+Q     Y DGSFLHLQT  ++++SP 
Sbjct: 42  ----DGAGKPPSHQQLGGGGGGGGPTWLNNAILRQQSQ--YADGSFLHLQTNSDSTSSPA 95

Query: 81  GRGVGDGQWFPRPSILRGGGGEEEEVP 1
                  QW  R   +   G + ++VP
Sbjct: 96  TATTTTNQWLSRS--MSNVGAQNDDVP 120


>dbj|BAL46506.1| Knotted1-like homeobox protein [Diospyros kaki]
          Length = 438

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 41/125 (32%), Positives = 55/125 (44%)
 Frame = -2

Query: 420 MAFHNNLAHELAMPQYAEQQLAAGGPAMLRTAMGQLGTGRPXXXXXXXXXXXXXXXGKDF 241
           MAF N+L+ E+A+  +  Q L      + R    QLG   P                   
Sbjct: 1   MAFPNHLSQEMALQHFTGQHLGENTSVLRRYLPEQLGQSSPDGAGKEHKEIQRLILESAA 60

Query: 240 DRLMENAGKPALAGGSGPTWLNSAILQQHGHGHYGDGSFLHLQTAPNASASPGGRGVGDG 61
            +  E+  +P   G  GPTWLNSAIL+QHG       +FL+LQTA +A+ S         
Sbjct: 61  GKAAEHHHQPQQVG-VGPTWLNSAILRQHGQ------NFLNLQTATDATTSQ-----ASN 108

Query: 60  QWFPR 46
           QW  R
Sbjct: 109 QWLSR 113


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