BLASTX nr result

ID: Zingiber25_contig00026707 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00026707
         (328 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001144081.1| uncharacterized protein LOC100276912 [Zea ma...    57   2e-06
ref|XP_004970822.1| PREDICTED: uncharacterized protein LOC101770...    55   1e-05

>ref|NP_001144081.1| uncharacterized protein LOC100276912 [Zea mays]
           gi|195636626|gb|ACG37781.1| hypothetical protein [Zea
           mays]
          Length = 396

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 36/61 (59%), Positives = 42/61 (68%), Gaps = 6/61 (9%)
 Frame = +3

Query: 3   DVSTKPGSISFRTMIMDD---LPGSDEISLS--VPLQIGSPSGSS-TPLRHILPLREIPR 164
           D STKPGSISFRTMI +D     G+DEI  S    + IGSPSGSS +    +LPL+EIPR
Sbjct: 336 DTSTKPGSISFRTMIREDQLQQDGTDEIGFSSRSGVHIGSPSGSSPSAAVPMLPLKEIPR 395

Query: 165 Y 167
           Y
Sbjct: 396 Y 396


>ref|XP_004970822.1| PREDICTED: uncharacterized protein LOC101770182 [Setaria italica]
          Length = 396

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 34/61 (55%), Positives = 42/61 (68%), Gaps = 6/61 (9%)
 Frame = +3

Query: 3   DVSTKPGSISFRTMIMDD---LPGSDEISLS--VPLQIGSPSGSS-TPLRHILPLREIPR 164
           D STK GSISFRTMI +D     G+DE+  S    +QIGSPSGSS +    +LPL+E+PR
Sbjct: 336 DTSTKRGSISFRTMIREDQLQQDGADEMGFSSRSGVQIGSPSGSSPSAAMPMLPLKEVPR 395

Query: 165 Y 167
           Y
Sbjct: 396 Y 396


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