BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00026613
         (343 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMS67637.1| Neurofilament heavy polypeptide [Triticum urartu]       81   2e-13
gb|AGE46115.1| arginine/serine-rich splicing factor RS2Z34 trans...    63   4e-08
gb|AGE46057.1| arginine/serine-rich splicing factor RS2Z35 trans...    39   2e-06
gb|AGE46053.1| arginine/serine-rich splicing factor RS2Z37B tran...    45   4e-06

>gb|EMS67637.1| Neurofilament heavy polypeptide [Triticum urartu]
          Length = 431

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 57/137 (41%), Positives = 66/137 (48%), Gaps = 23/137 (16%)
 Frame = -1

Query: 343 VGRISHRTRARDLEDLFGRYGR------FLGFL------------AQPGGL----WWEGA 230
           VGR+  RTR RDLEDLFGRYGR         FL            A P  +    WWEGA
Sbjct: 43  VGRLPSRTRTRDLEDLFGRYGRAEIETHLFNFLHPMALVIDMVLGAYPTSVSMVDWWEGA 102

Query: 229 IGGFGVYPSKFIGDFGDSFSNVIDVC*WKSSPSGV*LIF*GLK*CTFQYLSPDGL-LSGN 53
           +GG G Y  KFI                             L+  TF YL  DG+ +SGN
Sbjct: 103 LGGIGGYSRKFI-----------------------------LRGDTFLYLRLDGVTVSGN 133

Query: 52  NFRRVRNVDMKHDFAFV 2
           +F RVR+VDMKH+FAFV
Sbjct: 134 HFHRVRHVDMKHEFAFV 150


>gb|AGE46115.1| arginine/serine-rich splicing factor RS2Z34 transcript II [Sorghum
           bicolor] gi|448878306|gb|AGE46116.1|
           arginine/serine-rich splicing factor RS2Z34 transcript
           III [Sorghum bicolor] gi|448878308|gb|AGE46117.1|
           arginine/serine-rich splicing factor RS2Z34 transcript
           IV [Sorghum bicolor]
          Length = 94

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 30/40 (75%), Positives = 32/40 (80%)
 Frame = -1

Query: 343 VGRISHRTRARDLEDLFGRYGRFLGFLAQPGGLWWEGAIG 224
           VGR+S RTR RDLEDLFGRYGRF G L QP   WWEGA+G
Sbjct: 28  VGRVSSRTRTRDLEDLFGRYGRFWG-LTQPRCPWWEGALG 66


>gb|AGE46057.1| arginine/serine-rich splicing factor RS2Z35 transcript II [Zea
           mays]
          Length = 73

 Score = 39.3 bits (90), Expect(2) = 2e-06
 Identities = 17/25 (68%), Positives = 22/25 (88%)
 Frame = -2

Query: 276 FWVFWPNLEVFGGRVPLVDLVSILP 202
           F VF+P +EV GGRVPLV+LV+I+P
Sbjct: 37  FSVFYPTMEVCGGRVPLVELVAIVP 61



 Score = 37.7 bits (86), Expect(2) = 2e-06
 Identities = 17/26 (65%), Positives = 21/26 (80%)
 Frame = -1

Query: 343 VGRISHRTRARDLEDLFGRYGRFLGF 266
           VGR++ RTR+RDLE LF +YGRF  F
Sbjct: 15  VGRLAPRTRSRDLEYLFSKYGRFSVF 40


>gb|AGE46053.1| arginine/serine-rich splicing factor RS2Z37B transcript II [Zea
           mays] gi|448878182|gb|AGE46054.1| arginine/serine-rich
           splicing factor RS2Z37B transcript III [Zea mays]
          Length = 58

 Score = 44.7 bits (104), Expect(2) = 4e-06
 Identities = 20/32 (62%), Positives = 25/32 (78%)
 Frame = -1

Query: 343 VGRISHRTRARDLEDLFGRYGRFLGFLAQPGG 248
           VGR++ RTR+RDLE LFG+YGRF GF  +  G
Sbjct: 15  VGRLAPRTRSRDLEYLFGKYGRFFGFYREVFG 46



 Score = 31.6 bits (70), Expect(2) = 4e-06
 Identities = 14/15 (93%), Positives = 15/15 (100%)
 Frame = -2

Query: 252 EVFGGRVPLVDLVSI 208
           EVFGGRVPLVDLV+I
Sbjct: 43  EVFGGRVPLVDLVTI 57