BLASTX nr result

ID: Zingiber25_contig00026611 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00026611
         (841 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001063859.1| Os09g0549500 [Oryza sativa Japonica Group] g...   208   2e-51
gb|EXB96201.1| Zinc finger CCHC-type and RNA-binding motif-conta...   207   3e-51
ref|NP_001150292.1| RNA binding protein [Zea mays] gi|195638140|...   207   3e-51
ref|XP_002315325.2| hypothetical protein POPTR_0010s23420g [Popu...   205   2e-50
ref|XP_002265627.1| PREDICTED: zinc finger CCHC-type and RNA-bin...   204   3e-50
ref|XP_006833171.1| hypothetical protein AMTR_s00072p00141070 [A...   202   9e-50
gb|EEC85005.1| hypothetical protein OsI_32292 [Oryza sativa Indi...   202   1e-49
gb|EMJ19402.1| hypothetical protein PRUPE_ppa010566mg [Prunus pe...   202   2e-49
tpg|DAA62644.1| TPA: RNA binding protein [Zea mays]                   201   2e-49
ref|XP_002462786.1| hypothetical protein SORBIDRAFT_02g031980 [S...   200   5e-49
ref|XP_004957566.1| PREDICTED: zinc finger CCHC-type and RNA-bin...   199   8e-49
dbj|BAJ98501.1| predicted protein [Hordeum vulgare subsp. vulgare]    199   8e-49
ref|XP_006300227.1| hypothetical protein CARUB_v10016463mg [Caps...   199   1e-48
ref|XP_004308765.1| PREDICTED: zinc finger CCHC-type and RNA-bin...   198   2e-48
ref|XP_003578586.1| PREDICTED: uncharacterized protein LOC100826...   198   2e-48
ref|NP_001151698.1| RNA binding protein [Zea mays] gi|195649091|...   198   2e-48
ref|NP_187651.1| U12-type spliceosomal protein U11/U12 [Arabidop...   196   7e-48
ref|XP_006361687.1| PREDICTED: zinc finger CCHC-type and RNA-bin...   196   1e-47
ref|XP_006436503.1| hypothetical protein CICLE_v10032576mg [Citr...   195   2e-47
ref|XP_004250046.1| PREDICTED: uncharacterized protein LOC101266...   195   2e-47

>ref|NP_001063859.1| Os09g0549500 [Oryza sativa Japonica Group]
           gi|50725127|dbj|BAD33744.1| putative MADP-1 protein
           [Oryza sativa Japonica Group]
           gi|50726297|dbj|BAD33872.1| putative MADP-1 protein
           [Oryza sativa Japonica Group]
           gi|113632092|dbj|BAF25773.1| Os09g0549500 [Oryza sativa
           Japonica Group]
          Length = 274

 Score =  208 bits (530), Expect = 2e-51
 Identities = 124/247 (50%), Positives = 138/247 (55%), Gaps = 8/247 (3%)
 Frame = -2

Query: 798 FLYRYPVPPL--PXXXXXXXXXXXXXXXXXXXXXXXSKSTVYVSNLDFSLTNSDLHTIFS 625
           FLYRYP+P    P                       SKSTVYVSNLDF+LTNSDLHT+FS
Sbjct: 32  FLYRYPLPSAAAPGASGPSSHGGKPGGGGGSGGLAPSKSTVYVSNLDFALTNSDLHTLFS 91

Query: 624 TFGKVARVTVLKDRTTRRSRGVAFVLFVXXXXXXXXXXSMNGKILNGRTLAASIASDNGR 445
            FG+VARVTVLKDR +RRSRGVAFVLFV           M+GK+LNGRTL+ASIA DNGR
Sbjct: 92  RFGRVARVTVLKDRDSRRSRGVAFVLFVRREDAAAAAAEMHGKVLNGRTLSASIAEDNGR 151

Query: 444 AAEFIRRRVYKDKSKCYECGEEGHLSYECPKNQLGXXXXXXXXXXXXRAXXXXXXXXXXX 265
           AAEFIRRRVY+DKS+CYECGEEGHLSYECP+NQLG            R            
Sbjct: 152 AAEFIRRRVYRDKSRCYECGEEGHLSYECPRNQLGPRERPPPSKKSRRGGGSGGGGGGGG 211

Query: 264 XXXXXXGEEE------RFEDDNWASVVDTXXXXXXXXXXXXXXEDGNXXXXXXXKASYFS 103
                  + +       FEDD WASVVDT                         +  YFS
Sbjct: 212 GGRGASWQSDDEDSAAAFEDDRWASVVDTRGEEEKAAGKGE-----GKAMKKEKRKGYFS 266

Query: 102 DESGEDE 82
           DES EDE
Sbjct: 267 DESDEDE 273


>gb|EXB96201.1| Zinc finger CCHC-type and RNA-binding motif-containing protein 1
           [Morus notabilis]
          Length = 362

 Score =  207 bits (528), Expect = 3e-51
 Identities = 115/212 (54%), Positives = 133/212 (62%), Gaps = 8/212 (3%)
 Frame = -2

Query: 693 KSTVYVSNLDFSLTNSDLHTIFSTFGKVARVTVLKDRTTRRSRGVAFVLFVXXXXXXXXX 514
           KST+YVSN+DF+LTNSDLHT+FSTFGK+ARV+VLKDR TR+SRGVAFV FV         
Sbjct: 153 KSTLYVSNIDFALTNSDLHTLFSTFGKIARVSVLKDRHTRQSRGVAFVQFVSRDDAVFAA 212

Query: 513 XSMNGKILNGRTLAASIASDNGRAAEFIRRRVYKDKSKCYECGEEGHLSYECPKNQLGXX 334
             M+GK+LNGRTL ASIA+DNGR+AEFIR+RVY+DKS+CYECG EGHLSYECPKNQLG  
Sbjct: 213 SQMHGKVLNGRTLTASIAADNGRSAEFIRKRVYRDKSRCYECGAEGHLSYECPKNQLGPR 272

Query: 333 XXXXXXXXXXRAXXXXXXXXXXXXXXXXXGEEER--------FEDDNWASVVDTXXXXXX 178
                     R                   ++E         FE+DNWASVVD       
Sbjct: 273 ERPPPKRERGRGGGGGGGGGRGTNCWRENEQDEEIGPDGGEGFEEDNWASVVD----GGA 328

Query: 177 XXXXXXXXEDGNXXXXXXXKASYFSDESGEDE 82
                    DG        KASYFSDESG+DE
Sbjct: 329 DDRLLRSRGDGGQEKKRMKKASYFSDESGDDE 360


>ref|NP_001150292.1| RNA binding protein [Zea mays] gi|195638140|gb|ACG38538.1| RNA
           binding protein [Zea mays] gi|414590125|tpg|DAA40696.1|
           TPA: RNA binding protein [Zea mays]
          Length = 267

 Score =  207 bits (528), Expect = 3e-51
 Identities = 123/250 (49%), Positives = 137/250 (54%), Gaps = 11/250 (4%)
 Frame = -2

Query: 798 FLYRYPVPPLPXXXXXXXXXXXXXXXXXXXXXXXSKSTVYVSNLDFSLTNSDLHTIFSTF 619
           FLYRYP+P                          SKSTVYVSNLDFSLTNSD+H +FS F
Sbjct: 18  FLYRYPLPSAAASAGVSAGGSGKPRGGGSGGLAPSKSTVYVSNLDFSLTNSDIHLLFSRF 77

Query: 618 GKVARVTVLKDRTTRRSRGVAFVLFVXXXXXXXXXXSMNGKILNGRTLAASIASDNGRAA 439
           G+VARVTVLKDR +RRSRGVAFVLFV           M+GK+LNGRTL+ASIA DNGRAA
Sbjct: 78  GRVARVTVLKDRESRRSRGVAFVLFVLREDAAAAAAEMHGKVLNGRTLSASIADDNGRAA 137

Query: 438 EFIRRRVYKDKSKCYECGEEGHLSYECPKNQLGXXXXXXXXXXXXRAXXXXXXXXXXXXX 259
           EFIRRRVY+DKS+CYECGEEGHLSYECP+NQLG            R              
Sbjct: 138 EFIRRRVYRDKSRCYECGEEGHLSYECPRNQLGPRERPAPSKKSRRGGGSGGGTGGRGRG 197

Query: 258 XXXXGE-----------EERFEDDNWASVVDTXXXXXXXXXXXXXXEDGNXXXXXXXKAS 112
                +              FEDD WASVVDT              + G        +  
Sbjct: 198 RGGEADWHSDDDEDAAAAAAFEDDRWASVVDTRGEEEKSAGKEEGKKKGK-AARKEKRKG 256

Query: 111 YFSDESGEDE 82
           YFSDES EDE
Sbjct: 257 YFSDESDEDE 266


>ref|XP_002315325.2| hypothetical protein POPTR_0010s23420g [Populus trichocarpa]
           gi|550330442|gb|EEF01496.2| hypothetical protein
           POPTR_0010s23420g [Populus trichocarpa]
          Length = 246

 Score =  205 bits (521), Expect = 2e-50
 Identities = 112/204 (54%), Positives = 129/204 (63%)
 Frame = -2

Query: 693 KSTVYVSNLDFSLTNSDLHTIFSTFGKVARVTVLKDRTTRRSRGVAFVLFVXXXXXXXXX 514
           KST+YVSNLDFSLTNSDLHT+FSTFGKVARVTVLKDRTTR+SRGVAF+ FV         
Sbjct: 48  KSTLYVSNLDFSLTNSDLHTLFSTFGKVARVTVLKDRTTRKSRGVAFIQFVSRSDAVTAV 107

Query: 513 XSMNGKILNGRTLAASIASDNGRAAEFIRRRVYKDKSKCYECGEEGHLSYECPKNQLGXX 334
             M+ KILNGRTL+ASIA+DNGRAAEFI++RVYKDKSKCYECGE+GHLSYECP+N+LG  
Sbjct: 108 EQMDKKILNGRTLSASIAADNGRAAEFIKKRVYKDKSKCYECGEDGHLSYECPRNRLGIR 167

Query: 333 XXXXXXXXXXRAXXXXXXXXXXXXXXXXXGEEERFEDDNWASVVDTXXXXXXXXXXXXXX 154
                                         EE  FE++ WA+ VD               
Sbjct: 168 ERPVVKRGRGGGGGGGGGGGRGGGDWEEEEEEGEFEEEKWAAAVD-----GGVEERLLKG 222

Query: 153 EDGNXXXXXXXKASYFSDESGEDE 82
            +         KASYFSDES E+E
Sbjct: 223 GEVEKKKVKVKKASYFSDESDEEE 246


>ref|XP_002265627.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
           protein 1 [Vitis vinifera] gi|147789032|emb|CAN75783.1|
           hypothetical protein VITISV_022491 [Vitis vinifera]
          Length = 250

 Score =  204 bits (519), Expect = 3e-50
 Identities = 118/204 (57%), Positives = 128/204 (62%)
 Frame = -2

Query: 693 KSTVYVSNLDFSLTNSDLHTIFSTFGKVARVTVLKDRTTRRSRGVAFVLFVXXXXXXXXX 514
           KSTVYVSNLD++LTNSDL TIFSTFGKVA+VT+LKDR TR SRGVAFVLFV         
Sbjct: 50  KSTVYVSNLDYTLTNSDLFTIFSTFGKVAKVTILKDRHTRHSRGVAFVLFVSRDEAIAAA 109

Query: 513 XSMNGKILNGRTLAASIASDNGRAAEFIRRRVYKDKSKCYECGEEGHLSYECPKNQLGXX 334
             MNGK+LN RTL ASIA+DNGRAAEFIRRRVYKDKS+CYECGE GHLSYECP+NQLG  
Sbjct: 110 REMNGKVLNKRTLTASIAADNGRAAEFIRRRVYKDKSRCYECGEGGHLSYECPRNQLG-P 168

Query: 333 XXXXXXXXXXRAXXXXXXXXXXXXXXXXXGEEERFEDDNWASVVDTXXXXXXXXXXXXXX 154
                     R                     E FEDDNWASVVDT              
Sbjct: 169 RERPVPKRSRRGQGGSEARQNGDHDNGGSDGGEAFEDDNWASVVDT--GADQRLLKGSEG 226

Query: 153 EDGNXXXXXXXKASYFSDESGEDE 82
            +         KASYFSDES E+E
Sbjct: 227 LEMRKKGKKEKKASYFSDESDEEE 250


>ref|XP_006833171.1| hypothetical protein AMTR_s00072p00141070 [Amborella trichopoda]
           gi|548837822|gb|ERM98449.1| hypothetical protein
           AMTR_s00072p00141070 [Amborella trichopoda]
          Length = 244

 Score =  202 bits (515), Expect = 9e-50
 Identities = 115/204 (56%), Positives = 126/204 (61%)
 Frame = -2

Query: 693 KSTVYVSNLDFSLTNSDLHTIFSTFGKVARVTVLKDRTTRRSRGVAFVLFVXXXXXXXXX 514
           KSTVY SNLDFSLTNSDL TIFSTFGKVA+VTVLKDR TRRSRGVAFVLFV         
Sbjct: 49  KSTVYASNLDFSLTNSDLFTIFSTFGKVAKVTVLKDRVTRRSRGVAFVLFVSQSDARAAA 108

Query: 513 XSMNGKILNGRTLAASIASDNGRAAEFIRRRVYKDKSKCYECGEEGHLSYECPKNQLGXX 334
            S+NGK LNGRT+  SIA+DNGRA EFIRRRVYKDKS+CYECG EGHLSYECP NQLG  
Sbjct: 109 ASLNGKTLNGRTIKVSIAADNGRAPEFIRRRVYKDKSRCYECGMEGHLSYECPSNQLG-- 166

Query: 333 XXXXXXXXXXRAXXXXXXXXXXXXXXXXXGEEERFEDDNWASVVDTXXXXXXXXXXXXXX 154
                                         +E RFE+DNWASVV+T              
Sbjct: 167 PRERPAPSKRGRGRGRGNGRMGDFSEEDEEDEGRFEEDNWASVVETSGVEERDERRE--- 223

Query: 153 EDGNXXXXXXXKASYFSDESGEDE 82
                      + SYFSDESGE++
Sbjct: 224 ---ENKRHSAKRISYFSDESGEED 244


>gb|EEC85005.1| hypothetical protein OsI_32292 [Oryza sativa Indica Group]
          Length = 307

 Score =  202 bits (514), Expect = 1e-49
 Identities = 120/242 (49%), Positives = 134/242 (55%), Gaps = 6/242 (2%)
 Frame = -2

Query: 789 RYPVPPLPXXXXXXXXXXXXXXXXXXXXXXXSKSTVYVSNLDFSLTNSDLHTIFSTFGKV 610
           R P PPLP                       SKSTVYVS+LDF+LT SDLHT+FS FG+V
Sbjct: 70  RSPPPPLPAPRGPPRTAASPAAAAARVGLAPSKSTVYVSHLDFALTYSDLHTLFSRFGRV 129

Query: 609 ARVTVLKDRTTRRSRGVAFVLFVXXXXXXXXXXSMNGKILNGRTLAASIASDNGRAAEFI 430
           ARVTVLKDR +RRSRGVAFVLFV           M+GK+LNGRTL+ASIA DNGRAAEFI
Sbjct: 130 ARVTVLKDRDSRRSRGVAFVLFVRREDAAAAAAEMHGKVLNGRTLSASIAEDNGRAAEFI 189

Query: 429 RRRVYKDKSKCYECGEEGHLSYECPKNQLGXXXXXXXXXXXXRAXXXXXXXXXXXXXXXX 250
           RRRVY+DKS+CYECGEEGHLSYECP+NQLG            R                 
Sbjct: 190 RRRVYRDKSRCYECGEEGHLSYECPRNQLGPRERPPPSKKSRRGGGSGGGGGGGGGGRGA 249

Query: 249 XGEEE------RFEDDNWASVVDTXXXXXXXXXXXXXXEDGNXXXXXXXKASYFSDESGE 88
             + +       FEDD WASVVDT                         +  YFSDES E
Sbjct: 250 SWQSDDEDSAAAFEDDRWASVVDTRGEEEKAAGKGE-----GKAMKKEKRKGYFSDESDE 304

Query: 87  DE 82
           DE
Sbjct: 305 DE 306


>gb|EMJ19402.1| hypothetical protein PRUPE_ppa010566mg [Prunus persica]
          Length = 245

 Score =  202 bits (513), Expect = 2e-49
 Identities = 112/200 (56%), Positives = 126/200 (63%)
 Frame = -2

Query: 693 KSTVYVSNLDFSLTNSDLHTIFSTFGKVARVTVLKDRTTRRSRGVAFVLFVXXXXXXXXX 514
           KST+YVSNLD+SLTNSDLHT+FS FGK+ARVTVLK+R TR+SRGVAFV FV         
Sbjct: 48  KSTLYVSNLDYSLTNSDLHTLFSHFGKIARVTVLKNRETRQSRGVAFVQFVSRTDAVSAA 107

Query: 513 XSMNGKILNGRTLAASIASDNGRAAEFIRRRVYKDKSKCYECGEEGHLSYECPKNQLGXX 334
             M+GKILNGR L+ASIASDNGRAAEFI++R YKDKS+CYECGEEGHLSYECPKNQLG  
Sbjct: 108 GEMHGKILNGRKLSASIASDNGRAAEFIKKREYKDKSRCYECGEEGHLSYECPKNQLGPR 167

Query: 333 XXXXXXXXXXRAXXXXXXXXXXXXXXXXXGEEERFEDDNWASVVDTXXXXXXXXXXXXXX 154
                                           ERFEDDNWASVVD+              
Sbjct: 168 ERPPPKRVRRGGGGGGGSAAARVEEAEGDSGGERFEDDNWASVVDS---GADQRLLVGEE 224

Query: 153 EDGNXXXXXXXKASYFSDES 94
            +         K+SYFSDES
Sbjct: 225 MEEKKRKKGVKKSSYFSDES 244


>tpg|DAA62644.1| TPA: RNA binding protein [Zea mays]
          Length = 261

 Score =  201 bits (512), Expect = 2e-49
 Identities = 120/248 (48%), Positives = 136/248 (54%), Gaps = 9/248 (3%)
 Frame = -2

Query: 798 FLYRYPVPPLPXXXXXXXXXXXXXXXXXXXXXXXSKSTVYVSNLDFSLTNSDLHTIFSTF 619
           FLYRYP+P +                         KSTVYVSNLDF+LTNSDLH +FS F
Sbjct: 18  FLYRYPLPSVAASEGGGGKPRGGGGGSGGLAPS--KSTVYVSNLDFALTNSDLHLLFSRF 75

Query: 618 GKVARVTVLKDRTTRRSRGVAFVLFVXXXXXXXXXXSMNGKILNGRTLAASIASDNGRAA 439
           G+VARVTVLKDR +RRSRGVAFVLFV           M+GK+LNGRTL+ASIA+DNGRAA
Sbjct: 76  GRVARVTVLKDRESRRSRGVAFVLFVSREDAAAAAAEMHGKVLNGRTLSASIAADNGRAA 135

Query: 438 EFIRRRVYKDKSKCYECGEEGHLSYECPKNQLGXXXXXXXXXXXXRAXXXXXXXXXXXXX 259
           EFIRRRVY+DKS+CYECGEEGHLSYECP+NQLG            R              
Sbjct: 136 EFIRRRVYRDKSRCYECGEEGHLSYECPRNQLGPRERPAPSKKSRRGGGGGGGGRGRGRG 195

Query: 258 XXXXGEEE---------RFEDDNWASVVDTXXXXXXXXXXXXXXEDGNXXXXXXXKASYF 106
                  +          FEDD WASVVDT                         +  YF
Sbjct: 196 GQADWHSDDDEDAAAAVAFEDDKWASVVDTREVEEKAAGKGEGM---GKAARREKRKCYF 252

Query: 105 SDESGEDE 82
           SDES ED+
Sbjct: 253 SDESDEDD 260


>ref|XP_002462786.1| hypothetical protein SORBIDRAFT_02g031980 [Sorghum bicolor]
           gi|241926163|gb|EER99307.1| hypothetical protein
           SORBIDRAFT_02g031980 [Sorghum bicolor]
          Length = 270

 Score =  200 bits (509), Expect = 5e-49
 Identities = 121/253 (47%), Positives = 137/253 (54%), Gaps = 14/253 (5%)
 Frame = -2

Query: 798 FLYRYPVPPLPXXXXXXXXXXXXXXXXXXXXXXXS----KSTVYVSNLDFSLTNSDLHTI 631
           FLYRYP+P                               KSTVYVSNLDF+LTNSDLH +
Sbjct: 18  FLYRYPLPSAAASASASAGGGGKPRGGGAGGGSGGLAPSKSTVYVSNLDFALTNSDLHLL 77

Query: 630 FSTFGKVARVTVLKDRTTRRSRGVAFVLFVXXXXXXXXXXSMNGKILNGRTLAASIASDN 451
           FS FG+VARVTVLKDR +RRSRGVAFVLFV           M+GK+LNGRTL+ASIA+DN
Sbjct: 78  FSRFGRVARVTVLKDRESRRSRGVAFVLFVSREDAAAAAAEMHGKVLNGRTLSASIAADN 137

Query: 450 GRAAEFIRRRVYKDKSKCYECGEEGHLSYECPKNQLG----XXXXXXXXXXXXRAXXXXX 283
           GRAAEFIRRRVY+DKS+CYECGEEGHLSYECP+NQLG                       
Sbjct: 138 GRAAEFIRRRVYRDKSRCYECGEEGHLSYECPRNQLGPRERPAPSKKSRRGGGGGGSGGR 197

Query: 282 XXXXXXXXXXXXGEEE------RFEDDNWASVVDTXXXXXXXXXXXXXXEDGNXXXXXXX 121
                        ++E       FEDD WASVVDT                G        
Sbjct: 198 GRGRGGEADWHSDDDEDAAAAAAFEDDRWASVVDTRGEEEKAAGKEDGNGKGK-AARKEK 256

Query: 120 KASYFSDESGEDE 82
           +  YFSDES ED+
Sbjct: 257 RKGYFSDESDEDD 269


>ref|XP_004957566.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
           protein 1-like [Setaria italica]
          Length = 262

 Score =  199 bits (507), Expect = 8e-49
 Identities = 116/207 (56%), Positives = 129/207 (62%), Gaps = 3/207 (1%)
 Frame = -2

Query: 693 KSTVYVSNLDFSLTNSDLHTIFSTFGKVARVTVLKDRTTRRSRGVAFVLFVXXXXXXXXX 514
           KSTVYVSNLDF+LTNSDLH +FS FG+VA VTVLKDR +RRSRGVAFVLFV         
Sbjct: 59  KSTVYVSNLDFALTNSDLHLLFSRFGRVALVTVLKDRDSRRSRGVAFVLFVRREDAAAAA 118

Query: 513 XSMNGKILNGRTLAASIASDNGRAAEFIRRRVYKDKSKCYECGEEGHLSYECPKNQLGXX 334
             M+GK+LNGRTL+ASIASDNGRAAEFIRRRVY+DKS+CYECGEEGHLSYECP+NQLG  
Sbjct: 119 AEMHGKVLNGRTLSASIASDNGRAAEFIRRRVYRDKSRCYECGEEGHLSYECPRNQLGPR 178

Query: 333 XXXXXXXXXXRAXXXXXXXXXXXXXXXXXGE--EERFEDDNWASVVDTXXXXXXXXXXXX 160
                     R                   E     FEDD WASVVDT            
Sbjct: 179 ERPAPSKKSRRGGGGGRGGGGVAWHSDDDEEAAATAFEDDRWASVVDT----RGEEEKAA 234

Query: 159 XXEDGN-XXXXXXXKASYFSDESGEDE 82
             EDG         +  YFSDES E++
Sbjct: 235 EKEDGKAKAARREKRKGYFSDESDEED 261


>dbj|BAJ98501.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 285

 Score =  199 bits (507), Expect = 8e-49
 Identities = 125/258 (48%), Positives = 137/258 (53%), Gaps = 19/258 (7%)
 Frame = -2

Query: 798 FLYRYPVP------PLPXXXXXXXXXXXXXXXXXXXXXXXSKSTVYVSNLDFSLTNSDLH 637
           FLYRYP+P      P                         SKSTVYVSNLDF+LTNSDLH
Sbjct: 31  FLYRYPMPSSSAGAPSSAPASGGHGGGGRGGGSGSGGLAPSKSTVYVSNLDFALTNSDLH 90

Query: 636 TIFSTFGKVARVTVLKDRTTRRSRGVAFVLFVXXXXXXXXXXSMNGKILNGRTLAASIAS 457
           T+FS FGKVARVTVLKDR +RRSRGVAFVLFV           M+GK+LNGRTLAASIA 
Sbjct: 91  TLFSRFGKVARVTVLKDRESRRSRGVAFVLFVRREDAAAAAAEMHGKVLNGRTLAASIAE 150

Query: 456 DNGRAAEFIRRRVYKDKSKCYECGEEGHLSYECPKNQLGXXXXXXXXXXXXRAXXXXXXX 277
           DNGRAA+FIRRR Y+DKS CYECG EGHLSYECP+NQLG            R        
Sbjct: 151 DNGRAAQFIRRREYRDKSHCYECGGEGHLSYECPRNQLGPRERPPPSKKSRRGGGAAGGR 210

Query: 276 XXXXXXXXXXGEE-------------ERFEDDNWASVVDTXXXXXXXXXXXXXXEDGNXX 136
                     GEE               FEDD WASVVDT              +     
Sbjct: 211 GGGRGRGRGDGEEPAGQSDEDEDAVAAAFEDDRWASVVDTRGEEEKAAEKEGRAKAAR-- 268

Query: 135 XXXXXKASYFSDESGEDE 82
                +  YFSDES ED+
Sbjct: 269 --KEKRKGYFSDESDEDD 284


>ref|XP_006300227.1| hypothetical protein CARUB_v10016463mg [Capsella rubella]
           gi|482568936|gb|EOA33125.1| hypothetical protein
           CARUB_v10016463mg [Capsella rubella]
          Length = 260

 Score =  199 bits (505), Expect = 1e-48
 Identities = 112/208 (53%), Positives = 130/208 (62%), Gaps = 4/208 (1%)
 Frame = -2

Query: 693 KSTVYVSNLDFSLTNSDLHTIFSTFGKVARVTVLKDRTTRRSRGVAFVLFVXXXXXXXXX 514
           KST+YVSNLDFSLTNSD+HT+FSTFGKVARVTVLKDR TRRSRGVAFVL+V         
Sbjct: 54  KSTLYVSNLDFSLTNSDIHTLFSTFGKVARVTVLKDRHTRRSRGVAFVLYVSREDAAKAS 113

Query: 513 XSMNGKILNGRTLAASIASDNGRAAEFIRRRVYKDKSKCYECGEEGHLSYECPKNQLG-- 340
            SM+GKILNGR L  SIA+DNGRA+EFI++RVYKDKS+CYECG+EGHLSYECP+NQLG  
Sbjct: 114 GSMDGKILNGRKLTVSIAADNGRASEFIKKRVYKDKSRCYECGDEGHLSYECPRNQLGPR 173

Query: 339 --XXXXXXXXXXXXRAXXXXXXXXXXXXXXXXXGEEERFEDDNWASVVDTXXXXXXXXXX 166
                                              EE FE++NWASVVD           
Sbjct: 174 ERPPPPKKRGRRKEDGGEAEETREWSAAPPSLAVAEETFEEENWASVVDNEAGERLRMRE 233

Query: 165 XXXXEDGNXXXXXXXKASYFSDESGEDE 82
               E+         K SYFSDES +++
Sbjct: 234 AEEEEE-RRKKRKEKKVSYFSDESDDED 260


>ref|XP_004308765.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
           protein 1-like [Fragaria vesca subsp. vesca]
          Length = 256

 Score =  198 bits (503), Expect = 2e-48
 Identities = 109/204 (53%), Positives = 126/204 (61%)
 Frame = -2

Query: 693 KSTVYVSNLDFSLTNSDLHTIFSTFGKVARVTVLKDRTTRRSRGVAFVLFVXXXXXXXXX 514
           KST+YV+NLD+SLTNSDLH++FS FGK+ARVTVLKDR TRRS+GVAFV FV         
Sbjct: 54  KSTLYVANLDYSLTNSDLHSLFSRFGKIARVTVLKDRDTRRSKGVAFVQFVTRDDAVASA 113

Query: 513 XSMNGKILNGRTLAASIASDNGRAAEFIRRRVYKDKSKCYECGEEGHLSYECPKNQLGXX 334
             M+GKILNGR L+ASIA+DNGRAAEFI++R YKDKS+CYECG+EGHLSYECPKNQLG  
Sbjct: 114 REMHGKILNGRKLSASIAADNGRAAEFIKKREYKDKSRCYECGDEGHLSYECPKNQLGPR 173

Query: 333 XXXXXXXXXXRAXXXXXXXXXXXXXXXXXGEEERFEDDNWASVVDTXXXXXXXXXXXXXX 154
                                           ERFE+DNWASVVD               
Sbjct: 174 ERPPQKKPRRGGGGRGGGEARGEDEVEWESGGERFEEDNWASVVD---GGAGERLLSEEM 230

Query: 153 EDGNXXXXXXXKASYFSDESGEDE 82
           E+         K  YFSDES  D+
Sbjct: 231 EEEKKRKKKVKKGGYFSDESDHDD 254


>ref|XP_003578586.1| PREDICTED: uncharacterized protein LOC100826392 [Brachypodium
           distachyon]
          Length = 269

 Score =  198 bits (503), Expect = 2e-48
 Identities = 116/214 (54%), Positives = 126/214 (58%), Gaps = 10/214 (4%)
 Frame = -2

Query: 693 KSTVYVSNLDFSLTNSDLHTIFSTFGKVARVTVLKDRTTRRSRGVAFVLFVXXXXXXXXX 514
           KSTVYVSNLDF+LTNSDLHT+FS FGKVARVTVLKDR +RRSRGVAFVLFV         
Sbjct: 59  KSTVYVSNLDFALTNSDLHTLFSRFGKVARVTVLKDRESRRSRGVAFVLFVRREEAAAAA 118

Query: 513 XSMNGKILNGRTLAASIASDNGRAAEFIRRRVYKDKSKCYECGEEGHLSYECPKNQLGXX 334
             M+GK+LNGRTLAASIA DNGRAA+FIRRR Y+DKS CYECGEEGHLSYECP+NQLG  
Sbjct: 119 AEMHGKVLNGRTLAASIADDNGRAAQFIRRREYRDKSHCYECGEEGHLSYECPRNQLGPR 178

Query: 333 XXXXXXXXXXRAXXXXXXXXXXXXXXXXXGEEER----------FEDDNWASVVDTXXXX 184
                     R                  G   +          FEDD WASVVDT    
Sbjct: 179 ERPAPSKKSRRGGGGGGGGGGGRGVREIAGASYQSDEDDAVATAFEDDRWASVVDTRGEE 238

Query: 183 XXXXXXXXXXEDGNXXXXXXXKASYFSDESGEDE 82
                                +  YFSDES EDE
Sbjct: 239 EKAAEKEGRATAAR----KEKRKGYFSDESDEDE 268


>ref|NP_001151698.1| RNA binding protein [Zea mays] gi|195649091|gb|ACG44013.1| RNA
           binding protein [Zea mays]
          Length = 267

 Score =  198 bits (503), Expect = 2e-48
 Identities = 120/254 (47%), Positives = 138/254 (54%), Gaps = 15/254 (5%)
 Frame = -2

Query: 798 FLYRYPVPPLPXXXXXXXXXXXXXXXXXXXXXXXSKSTVYVSNLDFSLTNSDLHTIFSTF 619
           FLYRYP+P +                         KSTVYVSNLDF+LTNSDLH +FS F
Sbjct: 18  FLYRYPLPSVAASEGGGGKPRGGGGGSGGLAPS--KSTVYVSNLDFALTNSDLHLLFSRF 75

Query: 618 GKVARVTVLKDRTTRRSRGVAFVLFVXXXXXXXXXXSMNGKILNGRTLAASIASDNGRAA 439
           G+VARVTVLKDR +RRSRGVAFVLFV           M+GK+LNGRTL+ASIA+DNGRAA
Sbjct: 76  GRVARVTVLKDRESRRSRGVAFVLFVSREDAAAAAAEMHGKVLNGRTLSASIAADNGRAA 135

Query: 438 EFIRRRVYKDKSKCYECGEEGHLSYECPKNQLG----------XXXXXXXXXXXXRAXXX 289
           EFIRRRVY+DKS+CYECGEEGHLSYECP+NQLG                       +   
Sbjct: 136 EFIRRRVYRDKSRCYECGEEGHLSYECPRNQLGPRERPAPSKKSRGGGGGGGGGGGSSGG 195

Query: 288 XXXXXXXXXXXXXXGEEE-----RFEDDNWASVVDTXXXXXXXXXXXXXXEDGNXXXXXX 124
                          +E+      FEDD WASVVDT                        
Sbjct: 196 RGRGRGGQADWHSDDDEDAAAAVAFEDDKWASVVDTRGVEEKAAGKGEGMVKA---ARRE 252

Query: 123 XKASYFSDESGEDE 82
            +  YFSDES ED+
Sbjct: 253 KRKCYFSDESDEDD 266


>ref|NP_187651.1| U12-type spliceosomal protein U11/U12 [Arabidopsis thaliana]
           gi|12322795|gb|AAG51392.1|AC011560_24 hypothetical
           protein; 114721-113936 [Arabidopsis thaliana]
           gi|54261729|gb|AAV31168.1| At3g10400 [Arabidopsis
           thaliana] gi|61656137|gb|AAX49371.1| At3g10400
           [Arabidopsis thaliana] gi|332641379|gb|AEE74900.1|
           U12-type spliceosomal protein U11/U12 [Arabidopsis
           thaliana]
          Length = 261

 Score =  196 bits (499), Expect = 7e-48
 Identities = 111/207 (53%), Positives = 129/207 (62%), Gaps = 3/207 (1%)
 Frame = -2

Query: 693 KSTVYVSNLDFSLTNSDLHTIFSTFGKVARVTVLKDRTTRRSRGVAFVLFVXXXXXXXXX 514
           KST+YVSNLDFSLTNSD+HT+FSTFGKVARVTVLKDR TR+SRGVAFVL+V         
Sbjct: 56  KSTLYVSNLDFSLTNSDIHTLFSTFGKVARVTVLKDRHTRQSRGVAFVLYVSREDAAKAA 115

Query: 513 XSMNGKILNGRTLAASIASDNGRAAEFIRRRVYKDKSKCYECGEEGHLSYECPKNQLG-- 340
            SM+ KILNGR L  SIA+DNGRA+EFI++RVYKDKS+CYECG+EGHLSYECPKNQLG  
Sbjct: 116 RSMDAKILNGRKLTVSIAADNGRASEFIKKRVYKDKSRCYECGDEGHLSYECPKNQLGPR 175

Query: 339 -XXXXXXXXXXXXRAXXXXXXXXXXXXXXXXXGEEERFEDDNWASVVDTXXXXXXXXXXX 163
                                             EE FE++NWASVVD            
Sbjct: 176 ERPPPPKKRGRRKEEEGEAEEISWSAAAPSLAVAEEEFEEENWASVVDNEAGERLRKREA 235

Query: 162 XXXEDGNXXXXXXXKASYFSDESGEDE 82
              E+         K SYFSDES +++
Sbjct: 236 EEEEE-RRMKRKEKKVSYFSDESDDED 261


>ref|XP_006361687.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
           protein 1-like [Solanum tuberosum]
          Length = 275

 Score =  196 bits (497), Expect = 1e-47
 Identities = 113/218 (51%), Positives = 131/218 (60%), Gaps = 14/218 (6%)
 Frame = -2

Query: 693 KSTVYVSNLDFSLTNSDLHTIFSTFGKVARVTVLKDRTTRRSRGVAFVLFVXXXXXXXXX 514
           KSTVYVSNLD++LTNSDLHTIFSTFGKVA+VTV+KDR TR+SRGVAF+LFV         
Sbjct: 61  KSTVYVSNLDYTLTNSDLHTIFSTFGKVAKVTVVKDRVTRKSRGVAFILFVSREDAIKAV 120

Query: 513 XSMNGKILNGRTLAASIASDNGRAAEFIRRRVYKDKSKCYECGEEGHLSYECPKNQLGXX 334
             ++ K+LNGRTL ASIASDNGRAAEFIR++VYKDKS+CYECGEEGHLSYECPKN LG  
Sbjct: 121 KGIDKKVLNGRTLTASIASDNGRAAEFIRKKVYKDKSRCYECGEEGHLSYECPKNLLGPR 180

Query: 333 XXXXXXXXXXRAXXXXXXXXXXXXXXXXXGEEE--------------RFEDDNWASVVDT 196
                     R                  GE E              RF+DDNWASVVD 
Sbjct: 181 ERPEPPKKGRRGGGGGGGGGGKGGDEGRGGEWEDDEEEEEADDEGGARFDDDNWASVVD- 239

Query: 195 XXXXXXXXXXXXXXEDGNXXXXXXXKASYFSDESGEDE 82
                         ++         +  YFSDES E++
Sbjct: 240 --RGAEERLLKGDNDEFKKEARKDKRKGYFSDESDEED 275


>ref|XP_006436503.1| hypothetical protein CICLE_v10032576mg [Citrus clementina]
           gi|568864409|ref|XP_006485591.1| PREDICTED: zinc finger
           CCHC-type and RNA-binding motif-containing protein
           1-like [Citrus sinensis] gi|557538699|gb|ESR49743.1|
           hypothetical protein CICLE_v10032576mg [Citrus
           clementina]
          Length = 244

 Score =  195 bits (495), Expect = 2e-47
 Identities = 105/204 (51%), Positives = 129/204 (63%)
 Frame = -2

Query: 693 KSTVYVSNLDFSLTNSDLHTIFSTFGKVARVTVLKDRTTRRSRGVAFVLFVXXXXXXXXX 514
           KSTVYVSNLD++LTNSDLHT+FSTFGK+ARVTVLKDR TR+SRGVAF+ FV         
Sbjct: 59  KSTVYVSNLDYALTNSDLHTLFSTFGKIARVTVLKDRATRKSRGVAFIQFVQIPDALSAA 118

Query: 513 XSMNGKILNGRTLAASIASDNGRAAEFIRRRVYKDKSKCYECGEEGHLSYECPKNQLGXX 334
            +++GK+LNGRT+ ASIA+DNGRA+ FI++RVYKDKS+CYECG+EGHLSYECP+NQLG  
Sbjct: 119 RAIHGKVLNGRTVNASIAADNGRASSFIKKRVYKDKSRCYECGDEGHLSYECPRNQLGPR 178

Query: 333 XXXXXXXXXXRAXXXXXXXXXXXXXXXXXGEEERFEDDNWASVVDTXXXXXXXXXXXXXX 154
                     R+                  +E  F+D  WASVVD               
Sbjct: 179 ERPMPKKLRRRS---------------DGEDESEFDDGGWASVVD---GGAEERLLLMGE 220

Query: 153 EDGNXXXXXXXKASYFSDESGEDE 82
            +         + SYFSDES E+E
Sbjct: 221 NESEEKRKKAKRVSYFSDESDEEE 244


>ref|XP_004250046.1| PREDICTED: uncharacterized protein LOC101266891 [Solanum
           lycopersicum]
          Length = 272

 Score =  195 bits (495), Expect = 2e-47
 Identities = 110/214 (51%), Positives = 128/214 (59%), Gaps = 10/214 (4%)
 Frame = -2

Query: 693 KSTVYVSNLDFSLTNSDLHTIFSTFGKVARVTVLKDRTTRRSRGVAFVLFVXXXXXXXXX 514
           KSTVYVSNLD++LTNSDLHTIFS FGKVA+VTV+KDR TR+SRGVAF+LF+         
Sbjct: 62  KSTVYVSNLDYTLTNSDLHTIFSNFGKVAKVTVVKDRVTRKSRGVAFILFISREDAIKAV 121

Query: 513 XSMNGKILNGRTLAASIASDNGRAAEFIRRRVYKDKSKCYECGEEGHLSYECPKNQLGXX 334
             ++ K+LNGRTL ASIASDNGRAAEFIR++VYKDKS+CYECGEEGHLSYECPKN  G  
Sbjct: 122 KGIDKKLLNGRTLTASIASDNGRAAEFIRKKVYKDKSRCYECGEEGHLSYECPKNLFGPR 181

Query: 333 XXXXXXXXXXRAXXXXXXXXXXXXXXXXXGEEE----------RFEDDNWASVVDTXXXX 184
                     R                   EEE          RF DDNWASVVD     
Sbjct: 182 ERPEPPKKGRRGGGGGKRGDEGRGGEWEDDEEEEDEADDEGGARFADDNWASVVD---RG 238

Query: 183 XXXXXXXXXXEDGNXXXXXXXKASYFSDESGEDE 82
                     ++         +  YFSDES E++
Sbjct: 239 AEERLLKGDNDEFKKEARKEKRKGYFSDESDEED 272


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