BLASTX nr result

ID: Zingiber25_contig00026424 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00026424
         (588 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326939.1| predicted protein [Populus trichocarpa] gi|5...    59   9e-07
ref|XP_006293713.1| hypothetical protein CARUB_v10022670mg [Caps...    57   3e-06

>ref|XP_002326939.1| predicted protein [Populus trichocarpa]
           gi|566202141|ref|XP_006374945.1| hypothetical protein
           POPTR_0014s02970g [Populus trichocarpa]
           gi|550323258|gb|ERP52742.1| hypothetical protein
           POPTR_0014s02970g [Populus trichocarpa]
          Length = 672

 Score = 58.9 bits (141), Expect = 9e-07
 Identities = 43/122 (35%), Positives = 59/122 (48%), Gaps = 3/122 (2%)
 Frame = -3

Query: 586 REMELQKEGLTAATEKSEKAKEGKLDAEQELXXXXXXXXXXXXXXXXAKGGVDPQRIMPK 407
           +EM  +KE L  A +K+E+AKEGKL  EQEL                 +G  +P +    
Sbjct: 542 QEMSARKEALKIAMDKAEQAKEGKLGVEQELRKWRAEHEQQRRASESGQGAANPIKTPGA 601

Query: 406 LLEQPSELRSFTKS-DKGVGFVSMADSKQYISEDNSNT-GVPEVKT-RKSKKSLVPMLAS 236
             E   E ++F ++ D  VG+ S    K ++   N+ T   PEVK  RK KKSL P L  
Sbjct: 602 SFEDRKESKNFDRAPDAAVGYAS--SPKSHVPGSNTETDSSPEVKVPRKKKKSLFPRLLL 659

Query: 235 LL 230
            L
Sbjct: 660 FL 661


>ref|XP_006293713.1| hypothetical protein CARUB_v10022670mg [Capsella rubella]
           gi|482562421|gb|EOA26611.1| hypothetical protein
           CARUB_v10022670mg [Capsella rubella]
          Length = 790

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 41/112 (36%), Positives = 56/112 (50%), Gaps = 1/112 (0%)
 Frame = -3

Query: 586 REMELQKEGLTAATEKSEKAKEGKLDAEQELXXXXXXXXXXXXXXXXAKGGVDPQRIMPK 407
           R+M+ +K+ L  ATEK+EKAKEGKL  EQEL                   GV+ ++    
Sbjct: 668 RDMDARKKALKEATEKAEKAKEGKLGVEQELRKWRAEHEQKRKAG----DGVNTEKSQKG 723

Query: 406 LLEQPSELRSFTKSDKGVGFVSMADSKQYISEDNSNTG-VPEVKTRKSKKSL 254
             E   EL    +S + V + S + S  Y +EDNS T   P+ K+ K KK L
Sbjct: 724 SFEGGKELSKLEQSPETVAYAS-SPSDSYGTEDNSETNQSPQTKSGKKKKKL 774


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