BLASTX nr result
ID: Zingiber25_contig00026323
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00026323
(274 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004983049.1| PREDICTED: pentatricopeptide repeat-containi... 72 8e-11
gb|EMT03565.1| Pentatricopeptide repeat-containing protein [Aegi... 71 1e-10
ref|XP_002465660.1| hypothetical protein SORBIDRAFT_01g043290 [S... 69 6e-10
dbj|BAJ86663.1| predicted protein [Hordeum vulgare subsp. vulgare] 69 8e-10
ref|XP_006470989.1| PREDICTED: pentatricopeptide repeat-containi... 67 3e-09
ref|XP_006431492.1| hypothetical protein CICLE_v10000271mg [Citr... 67 3e-09
gb|EEE63443.1| hypothetical protein OsJ_18256 [Oryza sativa Japo... 67 3e-09
ref|NP_001055326.1| Os05g0365500 [Oryza sativa Japonica Group] g... 67 3e-09
ref|XP_003567254.1| PREDICTED: pentatricopeptide repeat-containi... 66 4e-09
gb|EMT09730.1| Pentatricopeptide repeat-containing protein [Aegi... 65 7e-09
ref|XP_006654311.1| PREDICTED: pentatricopeptide repeat-containi... 65 1e-08
gb|AAS80150.1| ACT11D09.4 [Cucumis melo] 64 3e-08
ref|XP_004156778.1| PREDICTED: pentatricopeptide repeat-containi... 62 8e-08
ref|XP_004148094.1| PREDICTED: pentatricopeptide repeat-containi... 62 8e-08
tpg|DAA49887.1| TPA: hypothetical protein ZEAMMB73_769486 [Zea m... 62 8e-08
gb|ACN35979.1| unknown [Zea mays] 62 8e-08
ref|NP_001130642.1| uncharacterized protein LOC100191742 [Zea ma... 62 8e-08
ref|NP_172498.1| glutamine-rich protein 23 [Arabidopsis thaliana... 60 3e-07
emb|CBI29649.3| unnamed protein product [Vitis vinifera] 60 3e-07
ref|XP_002267973.1| PREDICTED: pentatricopeptide repeat-containi... 60 3e-07
>ref|XP_004983049.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g10270-like [Setaria italica]
Length = 921
Score = 72.0 bits (175), Expect = 8e-11
Identities = 35/78 (44%), Positives = 48/78 (61%)
Frame = +2
Query: 2 AGRISQALKVFDKLWERGIRPNMLSYEVLVTALCNVGSLDRARDLFEQMLRSRINATSEL 181
AGRI ALKV+ ++ ++ I+PN ++E+LV ALC G LDRARDL M R + E
Sbjct: 473 AGRIDDALKVYGRMPDKEIKPNTTTFEILVKALCKAGDLDRARDLVMDMARGAVEPPQEF 532
Query: 182 SALLSDTFGKAGRSQEIE 235
+ D F K+ R +EIE
Sbjct: 533 RESVIDIFKKSNRQEEIE 550
>gb|EMT03565.1| Pentatricopeptide repeat-containing protein [Aegilops tauschii]
Length = 754
Score = 71.2 bits (173), Expect = 1e-10
Identities = 35/78 (44%), Positives = 49/78 (62%)
Frame = +2
Query: 2 AGRISQALKVFDKLWERGIRPNMLSYEVLVTALCNVGSLDRARDLFEQMLRSRINATSEL 181
AGR+ ALKV+ ++ ++ I+PN ++E+LV ALC G LDRA DL M R + AT E
Sbjct: 278 AGRVDDALKVYGRMADKEIKPNTTTFEILVNALCKEGELDRALDLVRDMARGGVVATPEF 337
Query: 182 SALLSDTFGKAGRSQEIE 235
+S+ F A R +EIE
Sbjct: 338 RESVSEIFKNADRHEEIE 355
>ref|XP_002465660.1| hypothetical protein SORBIDRAFT_01g043290 [Sorghum bicolor]
gi|241919514|gb|EER92658.1| hypothetical protein
SORBIDRAFT_01g043290 [Sorghum bicolor]
Length = 927
Score = 68.9 bits (167), Expect = 6e-10
Identities = 35/78 (44%), Positives = 51/78 (65%)
Frame = +2
Query: 2 AGRISQALKVFDKLWERGIRPNMLSYEVLVTALCNVGSLDRARDLFEQMLRSRINATSEL 181
AG+I ALKV+ ++ ++ I+PN +++E+LV ALC G+LD+ARDL M R+ I E
Sbjct: 471 AGQIDDALKVYGRMPDKEIKPNTITFEILVKALCKEGNLDQARDLVMDMARNGIVPPPEF 530
Query: 182 SALLSDTFGKAGRSQEIE 235
+ D F KA R +EIE
Sbjct: 531 RESVVDFFKKADRQEEIE 548
>dbj|BAJ86663.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 931
Score = 68.6 bits (166), Expect = 8e-10
Identities = 34/77 (44%), Positives = 47/77 (61%)
Frame = +2
Query: 5 GRISQALKVFDKLWERGIRPNMLSYEVLVTALCNVGSLDRARDLFEQMLRSRINATSELS 184
GRI ALKV+ ++ ++ I+PN ++E+LV ALC G LDRA DL M R + AT E
Sbjct: 473 GRIDDALKVYGRMADKEIKPNTTTFEILVNALCKEGELDRALDLVRDMARGGVVATPEFR 532
Query: 185 ALLSDTFGKAGRSQEIE 235
+ + F A R +EIE
Sbjct: 533 ESVGEIFKNADRHEEIE 549
>ref|XP_006470989.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g10270-like [Citrus sinensis]
Length = 840
Score = 66.6 bits (161), Expect = 3e-09
Identities = 28/77 (36%), Positives = 49/77 (63%)
Frame = +2
Query: 5 GRISQALKVFDKLWERGIRPNMLSYEVLVTALCNVGSLDRARDLFEQMLRSRINATSELS 184
G++++ + K+ E+ +P+ L Y+V+V LCN G D ++D+ +QM++ + T L
Sbjct: 479 GKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQ 538
Query: 185 ALLSDTFGKAGRSQEIE 235
+ +TFGKAGR +EIE
Sbjct: 539 DFVRETFGKAGRGEEIE 555
>ref|XP_006431492.1| hypothetical protein CICLE_v10000271mg [Citrus clementina]
gi|557533614|gb|ESR44732.1| hypothetical protein
CICLE_v10000271mg [Citrus clementina]
Length = 840
Score = 66.6 bits (161), Expect = 3e-09
Identities = 28/77 (36%), Positives = 49/77 (63%)
Frame = +2
Query: 5 GRISQALKVFDKLWERGIRPNMLSYEVLVTALCNVGSLDRARDLFEQMLRSRINATSELS 184
G++++ + K+ E+ +P+ L Y+V+V LCN G D ++D+ +QM++ + T L
Sbjct: 479 GKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQ 538
Query: 185 ALLSDTFGKAGRSQEIE 235
+ +TFGKAGR +EIE
Sbjct: 539 DFVRETFGKAGRGEEIE 555
>gb|EEE63443.1| hypothetical protein OsJ_18256 [Oryza sativa Japonica Group]
Length = 937
Score = 66.6 bits (161), Expect = 3e-09
Identities = 32/78 (41%), Positives = 47/78 (60%)
Frame = +2
Query: 2 AGRISQALKVFDKLWERGIRPNMLSYEVLVTALCNVGSLDRARDLFEQMLRSRINATSEL 181
AGR+ ALKV+ ++ ++ I+PN ++E LV ALC G LD+AR+L M + + E
Sbjct: 486 AGRMDDALKVYGRMPDKEIKPNTTTFETLVNALCKEGDLDKARELVSDMAKGGVTPPPEF 545
Query: 182 SALLSDTFGKAGRSQEIE 235
+ D F AGR +EIE
Sbjct: 546 RDSVIDIFKNAGRQEEIE 563
>ref|NP_001055326.1| Os05g0365500 [Oryza sativa Japonica Group]
gi|46063434|gb|AAS79737.1| putative pentatricopeptide
(PPR) repeat-containing protein, PF01535 [Oryza sativa
Japonica Group] gi|54287606|gb|AAV31350.1| putative
pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group] gi|54291873|gb|AAV32241.1|
putative pentatricopeptide repeat-containing protein
[Oryza sativa Japonica Group]
gi|113578877|dbj|BAF17240.1| Os05g0365500 [Oryza sativa
Japonica Group]
Length = 911
Score = 66.6 bits (161), Expect = 3e-09
Identities = 32/78 (41%), Positives = 47/78 (60%)
Frame = +2
Query: 2 AGRISQALKVFDKLWERGIRPNMLSYEVLVTALCNVGSLDRARDLFEQMLRSRINATSEL 181
AGR+ ALKV+ ++ ++ I+PN ++E LV ALC G LD+AR+L M + + E
Sbjct: 486 AGRMDDALKVYGRMPDKEIKPNTTTFETLVNALCKEGDLDKARELVSDMAKGGVTPPPEF 545
Query: 182 SALLSDTFGKAGRSQEIE 235
+ D F AGR +EIE
Sbjct: 546 RDSVIDIFKNAGRQEEIE 563
>ref|XP_003567254.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g10270-like [Brachypodium distachyon]
Length = 761
Score = 66.2 bits (160), Expect = 4e-09
Identities = 34/78 (43%), Positives = 46/78 (58%)
Frame = +2
Query: 2 AGRISQALKVFDKLWERGIRPNMLSYEVLVTALCNVGSLDRARDLFEQMLRSRINATSEL 181
AGRI ALKV+ ++ ++ I+PN ++E+LV ALC LDR RDL M R + A E
Sbjct: 471 AGRIDDALKVYGRMPDKEIKPNTTTFEILVKALCKERELDRTRDLVRDMSRGGVVAPPEF 530
Query: 182 SALLSDTFGKAGRSQEIE 235
+S+ F A R EIE
Sbjct: 531 REFVSEIFKNADRHDEIE 548
>gb|EMT09730.1| Pentatricopeptide repeat-containing protein [Aegilops tauschii]
Length = 1054
Score = 65.5 bits (158), Expect = 7e-09
Identities = 33/78 (42%), Positives = 47/78 (60%)
Frame = +2
Query: 2 AGRISQALKVFDKLWERGIRPNMLSYEVLVTALCNVGSLDRARDLFEQMLRSRINATSEL 181
AGRI ALKV+ ++ ++ I+P+ ++E+LV A C G LDRARDL M R + A E
Sbjct: 330 AGRIDDALKVYGRMPDKEIKPSTATFEILVKASCKEGELDRARDLVRDMARGGVVAPPEF 389
Query: 182 SALLSDTFGKAGRSQEIE 235
+ + F A R +EIE
Sbjct: 390 RECIVEIFKTADRQEEIE 407
>ref|XP_006654311.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g10270-like [Oryza brachyantha]
Length = 754
Score = 64.7 bits (156), Expect = 1e-08
Identities = 29/78 (37%), Positives = 49/78 (62%)
Frame = +2
Query: 2 AGRISQALKVFDKLWERGIRPNMLSYEVLVTALCNVGSLDRARDLFEQMLRSRINATSEL 181
AG++ ALKV+ ++ ++ I+PN ++E+L+ ALC G+LD+ARDL +M R + E
Sbjct: 329 AGQMDDALKVYGRMADKEIKPNTTTFEILINALCKEGNLDQARDLVTEMARGGVACPPEF 388
Query: 182 SALLSDTFGKAGRSQEIE 235
+ + F GR +E+E
Sbjct: 389 RESVINIFKNDGRQEEVE 406
>gb|AAS80150.1| ACT11D09.4 [Cucumis melo]
Length = 896
Score = 63.5 bits (153), Expect = 3e-08
Identities = 29/77 (37%), Positives = 47/77 (61%)
Frame = +2
Query: 5 GRISQALKVFDKLWERGIRPNMLSYEVLVTALCNVGSLDRARDLFEQMLRSRINATSELS 184
G+ + ++ K+ ER +P+ Y+V++ LCN G+LD +R+L +Q++R I T L
Sbjct: 483 GKAADCAQILTKMGERDPKPDPTCYDVVIRGLCNEGALDTSRELLDQIMRYGIGLTPTLE 542
Query: 185 ALLSDTFGKAGRSQEIE 235
+ D F KAGR +EIE
Sbjct: 543 EFVKDAFVKAGRHEEIE 559
>ref|XP_004156778.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g10270-like [Cucumis sativus]
Length = 559
Score = 62.0 bits (149), Expect = 8e-08
Identities = 28/77 (36%), Positives = 47/77 (61%)
Frame = +2
Query: 5 GRISQALKVFDKLWERGIRPNMLSYEVLVTALCNVGSLDRARDLFEQMLRSRINATSELS 184
G+ + ++ K+ ER +P+ Y+V++ LCN G+LD +R+L +Q++R I T L
Sbjct: 291 GKAADCAQILTKMGERDPKPDPTCYDVVIRGLCNEGALDASRELLDQIMRYGIGLTPTLE 350
Query: 185 ALLSDTFGKAGRSQEIE 235
+ + F KAGR +EIE
Sbjct: 351 EFVKEAFVKAGRHEEIE 367
>ref|XP_004148094.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g10270-like [Cucumis sativus]
Length = 871
Score = 62.0 bits (149), Expect = 8e-08
Identities = 28/77 (36%), Positives = 47/77 (61%)
Frame = +2
Query: 5 GRISQALKVFDKLWERGIRPNMLSYEVLVTALCNVGSLDRARDLFEQMLRSRINATSELS 184
G+ + ++ K+ ER +P+ Y+V++ LCN G+LD +R+L +Q++R I T L
Sbjct: 457 GKAADCAQILTKMGERDPKPDPTCYDVVIRGLCNEGALDASRELLDQIMRYGIGLTPTLE 516
Query: 185 ALLSDTFGKAGRSQEIE 235
+ + F KAGR +EIE
Sbjct: 517 EFVKEAFVKAGRHEEIE 533
>tpg|DAA49887.1| TPA: hypothetical protein ZEAMMB73_769486 [Zea mays]
Length = 775
Score = 62.0 bits (149), Expect = 8e-08
Identities = 33/78 (42%), Positives = 47/78 (60%)
Frame = +2
Query: 2 AGRISQALKVFDKLWERGIRPNMLSYEVLVTALCNVGSLDRARDLFEQMLRSRINATSEL 181
AGRI ALKV+ ++ ++ I+PNM ++E+LV ALC LD+AR L M R I
Sbjct: 433 AGRIDDALKVYGRMPDKEIKPNMTTFEILVKALCKEEDLDQARGLVMDMARGGIVPPQGF 492
Query: 182 SALLSDTFGKAGRSQEIE 235
+ + F +AGR +EIE
Sbjct: 493 RESVVNFFKEAGRQEEIE 510
>gb|ACN35979.1| unknown [Zea mays]
Length = 813
Score = 62.0 bits (149), Expect = 8e-08
Identities = 33/78 (42%), Positives = 47/78 (60%)
Frame = +2
Query: 2 AGRISQALKVFDKLWERGIRPNMLSYEVLVTALCNVGSLDRARDLFEQMLRSRINATSEL 181
AGRI ALKV+ ++ ++ I+PNM ++E+LV ALC LD+AR L M R I
Sbjct: 471 AGRIDDALKVYGRMPDKEIKPNMTTFEILVKALCKEEDLDQARGLVMDMARGGIVPPQGF 530
Query: 182 SALLSDTFGKAGRSQEIE 235
+ + F +AGR +EIE
Sbjct: 531 RESVVNFFKEAGRQEEIE 548
>ref|NP_001130642.1| uncharacterized protein LOC100191742 [Zea mays]
gi|194689720|gb|ACF78944.1| unknown [Zea mays]
gi|414871331|tpg|DAA49888.1| TPA: hypothetical protein
ZEAMMB73_769486 [Zea mays]
Length = 813
Score = 62.0 bits (149), Expect = 8e-08
Identities = 33/78 (42%), Positives = 47/78 (60%)
Frame = +2
Query: 2 AGRISQALKVFDKLWERGIRPNMLSYEVLVTALCNVGSLDRARDLFEQMLRSRINATSEL 181
AGRI ALKV+ ++ ++ I+PNM ++E+LV ALC LD+AR L M R I
Sbjct: 471 AGRIDDALKVYGRMPDKEIKPNMTTFEILVKALCKEEDLDQARGLVMDMARGGIVPPQGF 530
Query: 182 SALLSDTFGKAGRSQEIE 235
+ + F +AGR +EIE
Sbjct: 531 RESVVNFFKEAGRQEEIE 548
>ref|NP_172498.1| glutamine-rich protein 23 [Arabidopsis thaliana]
gi|75213379|sp|Q9SY69.1|PPR29_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g10270; AltName: Full=Protein GLUTAMINE-RICH PROTEIN
23 gi|4914329|gb|AAD32877.1|AC005489_15 F14N23.15
[Arabidopsis thaliana] gi|332190439|gb|AEE28560.1|
glutamine-rich protein 23 [Arabidopsis thaliana]
Length = 913
Score = 60.1 bits (144), Expect = 3e-07
Identities = 27/77 (35%), Positives = 50/77 (64%)
Frame = +2
Query: 5 GRISQALKVFDKLWERGIRPNMLSYEVLVTALCNVGSLDRARDLFEQMLRSRINATSELS 184
G+++++ +V K+ ER +P+ Y+V+V LC+ +LD+A+D+ +M+R + T+ L
Sbjct: 520 GKLTESAEVLTKMGEREPKPDPSIYDVVVRGLCDGDALDQAKDIVGEMIRHNVGVTTVLR 579
Query: 185 ALLSDTFGKAGRSQEIE 235
+ + F KAGR +EIE
Sbjct: 580 EFIIEVFEKAGRREEIE 596
>emb|CBI29649.3| unnamed protein product [Vitis vinifera]
Length = 616
Score = 60.1 bits (144), Expect = 3e-07
Identities = 28/77 (36%), Positives = 44/77 (57%)
Frame = +2
Query: 5 GRISQALKVFDKLWERGIRPNMLSYEVLVTALCNVGSLDRARDLFEQMLRSRINATSELS 184
G+ + + V K+ E+ +P+ +YE+++ LC D +RDL QM+R I T L
Sbjct: 475 GKAGECVPVLTKMGEKDPKPDPTTYEIVIKGLCKERLFDASRDLMGQMVRYNIGVTPSLR 534
Query: 185 ALLSDTFGKAGRSQEIE 235
+ + FGK GRS+EIE
Sbjct: 535 EFVVEAFGKEGRSEEIE 551
>ref|XP_002267973.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g10270-like [Vitis vinifera]
Length = 627
Score = 60.1 bits (144), Expect = 3e-07
Identities = 28/77 (36%), Positives = 44/77 (57%)
Frame = +2
Query: 5 GRISQALKVFDKLWERGIRPNMLSYEVLVTALCNVGSLDRARDLFEQMLRSRINATSELS 184
G+ + + V K+ E+ +P+ +YE+++ LC D +RDL QM+R I T L
Sbjct: 475 GKAGECVPVLTKMGEKDPKPDPTTYEIVIKGLCKERLFDASRDLMGQMVRYNIGVTPSLR 534
Query: 185 ALLSDTFGKAGRSQEIE 235
+ + FGK GRS+EIE
Sbjct: 535 EFVVEAFGKEGRSEEIE 551