BLASTX nr result

ID: Zingiber25_contig00026279 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00026279
         (481 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE58665.1| hypothetical protein OsJ_10079 [Oryza sativa Japo...    61   1e-07
gb|EEC74839.1| hypothetical protein OsI_10686 [Oryza sativa Indi...    61   1e-07
gb|ABF94870.1| hydroxyproline-rich glycoprotein family protein, ...    61   1e-07
ref|XP_006649704.1| PREDICTED: uncharacterized protein LOC102720...    57   3e-06

>gb|EEE58665.1| hypothetical protein OsJ_10079 [Oryza sativa Japonica Group]
          Length = 626

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 49/145 (33%), Positives = 68/145 (46%), Gaps = 30/145 (20%)
 Frame = -3

Query: 404 AATPFPAP----------MLSVAPIHPGHRQSVSGTGVFLPPGSIH-----------PPP 288
           AA PFP+P          M   AP     R  V GTGVFLPPGS H            P 
Sbjct: 480 AAMPFPSPVPLPNSTTAWMAEAAPRSAPQRLPVPGTGVFLPPGSGHALPHQMMTASQSPA 539

Query: 287 PKLTSTEA---IHASQVVTLPDKPICNGDASPTIEQKASPKSTAESTRRKMESNACSS-- 123
             ++ST++   +H     T+ +  + NGD SP    K+SP   +++  +K E N  S+  
Sbjct: 540 EPISSTDSSAYVHNKSTSTMGE--MANGDVSP----KSSPAKQSDAVEQKPECNGSSNGG 593

Query: 122 ----NMDSAPSAEQQDAVVKKLASN 60
               +  SA S EQQ+  +KK+ SN
Sbjct: 594 SSLVDKKSAVSKEQQNGGMKKVGSN 618


>gb|EEC74839.1| hypothetical protein OsI_10686 [Oryza sativa Indica Group]
          Length = 658

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 49/145 (33%), Positives = 68/145 (46%), Gaps = 30/145 (20%)
 Frame = -3

Query: 404 AATPFPAP----------MLSVAPIHPGHRQSVSGTGVFLPPGSIH-----------PPP 288
           AA PFP+P          M   AP     R  V GTGVFLPPGS H            P 
Sbjct: 512 AAMPFPSPVPLPNSTTAWMAEAAPRSAPQRLPVPGTGVFLPPGSGHALPHQMMTASQSPA 571

Query: 287 PKLTSTEA---IHASQVVTLPDKPICNGDASPTIEQKASPKSTAESTRRKMESNACSS-- 123
             ++ST++   +H     T+ +  + NGD SP    K+SP   +++  +K E N  S+  
Sbjct: 572 EPISSTDSSAYVHNKSTSTMGE--MANGDVSP----KSSPAKQSDAVEQKPECNGSSNGG 625

Query: 122 ----NMDSAPSAEQQDAVVKKLASN 60
               +  SA S EQQ+  +KK+ SN
Sbjct: 626 SSLVDKKSAVSKEQQNGGMKKVGSN 650


>gb|ABF94870.1| hydroxyproline-rich glycoprotein family protein, putative,
           expressed [Oryza sativa Japonica Group]
          Length = 658

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 49/145 (33%), Positives = 68/145 (46%), Gaps = 30/145 (20%)
 Frame = -3

Query: 404 AATPFPAP----------MLSVAPIHPGHRQSVSGTGVFLPPGSIH-----------PPP 288
           AA PFP+P          M   AP     R  V GTGVFLPPGS H            P 
Sbjct: 512 AAMPFPSPVPLPNSTTAWMAEAAPRSAPQRLPVPGTGVFLPPGSGHALPHQMMTASQSPA 571

Query: 287 PKLTSTEA---IHASQVVTLPDKPICNGDASPTIEQKASPKSTAESTRRKMESNACSS-- 123
             ++ST++   +H     T+ +  + NGD SP    K+SP   +++  +K E N  S+  
Sbjct: 572 EPISSTDSSAYVHNKSTSTMGE--MANGDVSP----KSSPAKQSDAVEQKPECNGSSNGG 625

Query: 122 ----NMDSAPSAEQQDAVVKKLASN 60
               +  SA S EQQ+  +KK+ SN
Sbjct: 626 SSLVDKKSAVSKEQQNGGMKKVGSN 650


>ref|XP_006649704.1| PREDICTED: uncharacterized protein LOC102720214 [Oryza brachyantha]
          Length = 637

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 39/122 (31%), Positives = 55/122 (45%), Gaps = 22/122 (18%)
 Frame = -3

Query: 410 PLAAT--PFPAP----------MLSVAPIHPGHRQSVSGTGVFLPPGSIHPPPPKLTSTE 267
           P+ AT  PFP+P          M   AP     R  V GTGVFLPPGS+HP P ++ +  
Sbjct: 503 PVTATAIPFPSPVPLANSTTAWMTEAAPRSAALRLPVPGTGVFLPPGSVHPLPHQMMTAS 562

Query: 266 AIHASQVVTLPDK----------PICNGDASPTIEQKASPKSTAESTRRKMESNACSSNM 117
             HA  +                 + NG+ SP    K+SP   +++  +K+E N  S+  
Sbjct: 563 QAHAEPISPTDSSAYVHNKSTVVEMSNGNVSP----KSSPPKKSDAVEQKVECNGSSNGG 618

Query: 116 DS 111
            S
Sbjct: 619 SS 620


Top