BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00026229
         (2634 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004951987.1| PREDICTED: pentatricopeptide repeat-containi...   706   0.0  
ref|XP_004951986.1| PREDICTED: pentatricopeptide repeat-containi...   706   0.0  
ref|XP_004951985.1| PREDICTED: pentatricopeptide repeat-containi...   706   0.0  
ref|XP_004951984.1| PREDICTED: pentatricopeptide repeat-containi...   706   0.0  
dbj|BAD07992.1| putative pentatricopeptide (PPR) repeat-containi...   656   0.0  
ref|XP_006648286.1| PREDICTED: pentatricopeptide repeat-containi...   639   e-180
ref|XP_003574111.1| PREDICTED: pentatricopeptide repeat-containi...   634   e-179
ref|XP_002279701.2| PREDICTED: pentatricopeptide repeat-containi...   612   e-172
gb|EMJ15850.1| hypothetical protein PRUPE_ppa001961mg [Prunus pe...   608   e-171
ref|XP_006360089.1| PREDICTED: pentatricopeptide repeat-containi...   607   e-171
ref|XP_006475231.1| PREDICTED: pentatricopeptide repeat-containi...   604   e-170
ref|XP_006582247.1| PREDICTED: pentatricopeptide repeat-containi...   600   e-168
ref|XP_002319806.1| predicted protein [Populus trichocarpa]           599   e-168
gb|EOY12570.1| Tetratricopeptide repeat-like superfamily protein...   596   e-167
ref|XP_006582248.1| PREDICTED: pentatricopeptide repeat-containi...   595   e-167
ref|XP_002453263.1| hypothetical protein SORBIDRAFT_04g002710 [S...   595   e-167
ref|XP_004244155.1| PREDICTED: pentatricopeptide repeat-containi...   593   e-167
gb|EOY12569.1| Tetratricopeptide repeat-like superfamily protein...   593   e-166
ref|XP_006370619.1| hypothetical protein POPTR_0001s44310g [Popu...   588   e-165
ref|XP_004307303.1| PREDICTED: pentatricopeptide repeat-containi...   575   e-161

>ref|XP_004951987.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
            mitochondrial-like isoform X4 [Setaria italica]
          Length = 904

 Score =  706 bits (1822), Expect = 0.0
 Identities = 364/745 (48%), Positives = 517/745 (69%), Gaps = 5/745 (0%)
 Frame = -2

Query: 2540 DRDKATTA--PHSSRDSTGDMPFKN-VLDFPWF-SNGSQNCTTQSKKILLRERKKKYIFK 2373
            D ++AT +  P    +  G++   N +LDF WF S  S++     ++ + RE+KK+YIFK
Sbjct: 131  DVEEATPSEVPVEDSEDAGEVATSNKILDFEWFQSPPSKDPLMHWRREVAREKKKQYIFK 190

Query: 2372 NVESRRFIELMKKCADKLGTESTLQFFEKLGRETGVKEYNTLIKLCIDKARGCRKEEDSL 2193
            NVESRR+ +LM+ CA+KLGT+ST++FF KLGRETGVKE+N+LIKLC++KAR C   + + 
Sbjct: 191  NVESRRYTKLMQLCANKLGTKSTIEFFGKLGRETGVKEFNSLIKLCLNKARACNDVDSAA 250

Query: 2192 VYINKVHGLFLSMIEKGMPIEEESYGPLLNYMIDKKILLGFQMFIELFKNEIPDCSRIGY 2013
             YI + + LF +M +KG+ IE++ YGP L Y++D  +L  F+MF   FK+  P  SRI Y
Sbjct: 251  EYIYRAYRLFETMRDKGLMIEQDIYGPFLLYLVDVGLLEEFEMFTAFFKDANPQSSRIAY 310

Query: 2012 YEMVFWIMVGNEEKIEELLDLVKVGSFEDKYPFIESYLLAFCRSGSDRKKDLLQLLEIVD 1833
            YEM+ +I V +EEKI+EL   V+  + E  Y   ESY+LAF  S   RK+DL+ LL+++D
Sbjct: 311  YEMLRYIRVQDEEKIQELCHSVENYNEEAHYDIAESYMLAFAESS--RKEDLIALLDLLD 368

Query: 1832 MGRISSPKCIECVFRSLGTLQLEDLAEKYFFELNTAGLWKEDISSFICKYVTSLPNLVVE 1653
            + ++S  K I  +F+SLG L+LE+ AEK    + + G    +ISS I  Y  ++PN++VE
Sbjct: 369  LAKVSGSKYISNIFKSLGRLELENYAEKLLQGMRSKGCADGNISSLILYYAANIPNIMVE 428

Query: 1652 DVISKFINTHQKLGIAASIASYEKLISLCCSSNKVCVSLDIVDHMYKSGLCVPIEVLSPI 1473
            D++  F   H+K  +A SIA Y+K+IS+CC+S+K+ ++L++ D M KS   VPIE   PI
Sbjct: 429  DMLVAFHKWHEKFEVAPSIAVYDKIISICCNSSKIGLALEVADCMCKSSSNVPIESFHPI 488

Query: 1472 LHACEQSGQLEMVHPIFLVMRQHNLQPTEDTLKRIIHLYMKMKDFEGAYNVIIDAQEMNV 1293
            +HACEQ G+L M  P++ ++RQHNL+   +T + +I L++KMKDFEGAYN++ DA+E   
Sbjct: 489  IHACEQRGELHMARPMYNLIRQHNLKLKSETFRSMISLFVKMKDFEGAYNILTDAEESGE 548

Query: 1292 MPTTAMYNAIMAGYFREKNNHRALMVLKQIEHANLKPDSETYSYLIANCECEEDIVKYRE 1113
            + T ++YNAIM GY+REKN++ A MV+ Q++ A +KPDSET+SYLI NCE EEDI KY +
Sbjct: 549  LSTVSLYNAIMLGYYREKNHNGAQMVMSQMQIAGVKPDSETFSYLIVNCESEEDISKYHD 608

Query: 1112 QMCCSEVGFTKYIYMSLVNAYAKFGNFEMAKQIILNKEIPVNYLNEINGVLMSALASNGQ 933
            Q+    +  T+ IYM+L+NAYA+ GNF+MAKQ++L+KEIP   LN+    L+ ALASNGQ
Sbjct: 609  QLRQDGIQMTRNIYMALINAYARLGNFDMAKQVLLDKEIPRKLLNDTKSALVGALASNGQ 668

Query: 932  IHDALGIYAEIKQSRANIEPKAVISLLEHLQTXXXXXXXXXXXXXLKDSNSWFDGCSRVI 753
            + DAL +Y +IKQS  +IEP+A I+L+EH++T             L DS+SWF+GC RVI
Sbjct: 669  VLDALHMYDDIKQSGGSIEPRAAIALIEHIRTEGELDRMHQLLDELNDSSSWFEGCGRVI 728

Query: 752  LYCIQYNLTGSAXXXXXXXXXKDVSSANLIIGQMFSQIFKTP-TNLKSGFELLQGVKELG 576
            LYC+Q+N   +A         KD  S  +++ Q+F QI++   TNL  G  LL  VKELG
Sbjct: 729  LYCVQHNYPDAAIDLLKQLKEKDEMSTYMVVDQVFGQIWEMEITNLDLGMVLLHAVKELG 788

Query: 575  LHPSRTCLDFLLSTCVKAENSQMAWRVWSEYETSGLAYNSLTFIRMYQALLASKEFAAAK 396
            L+ SRT LDFLLS CVK +N Q A ++WSEYE++G+++N LT +RMYQALL+S  + AAK
Sbjct: 789  LNVSRTSLDFLLSACVKLKNLQCAQQIWSEYESAGVSHNVLTSLRMYQALLSSGCWKAAK 848

Query: 395  ELLKRIPIEDRHVQYLINACETRYC 321
            +LLK I  ED HV+Y+INAC   YC
Sbjct: 849  KLLKTISKEDEHVRYIINACHMTYC 873


>ref|XP_004951986.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
            mitochondrial-like isoform X3 [Setaria italica]
          Length = 905

 Score =  706 bits (1822), Expect = 0.0
 Identities = 364/745 (48%), Positives = 517/745 (69%), Gaps = 5/745 (0%)
 Frame = -2

Query: 2540 DRDKATTA--PHSSRDSTGDMPFKN-VLDFPWF-SNGSQNCTTQSKKILLRERKKKYIFK 2373
            D ++AT +  P    +  G++   N +LDF WF S  S++     ++ + RE+KK+YIFK
Sbjct: 131  DVEEATPSEVPVEDSEDAGEVATSNKILDFEWFQSPPSKDPLMHWRREVAREKKKQYIFK 190

Query: 2372 NVESRRFIELMKKCADKLGTESTLQFFEKLGRETGVKEYNTLIKLCIDKARGCRKEEDSL 2193
            NVESRR+ +LM+ CA+KLGT+ST++FF KLGRETGVKE+N+LIKLC++KAR C   + + 
Sbjct: 191  NVESRRYTKLMQLCANKLGTKSTIEFFGKLGRETGVKEFNSLIKLCLNKARACNDVDSAA 250

Query: 2192 VYINKVHGLFLSMIEKGMPIEEESYGPLLNYMIDKKILLGFQMFIELFKNEIPDCSRIGY 2013
             YI + + LF +M +KG+ IE++ YGP L Y++D  +L  F+MF   FK+  P  SRI Y
Sbjct: 251  EYIYRAYRLFETMRDKGLMIEQDIYGPFLLYLVDVGLLEEFEMFTAFFKDANPQSSRIAY 310

Query: 2012 YEMVFWIMVGNEEKIEELLDLVKVGSFEDKYPFIESYLLAFCRSGSDRKKDLLQLLEIVD 1833
            YEM+ +I V +EEKI+EL   V+  + E  Y   ESY+LAF  S   RK+DL+ LL+++D
Sbjct: 311  YEMLRYIRVQDEEKIQELCHSVENYNEEAHYDIAESYMLAFAESS--RKEDLIALLDLLD 368

Query: 1832 MGRISSPKCIECVFRSLGTLQLEDLAEKYFFELNTAGLWKEDISSFICKYVTSLPNLVVE 1653
            + ++S  K I  +F+SLG L+LE+ AEK    + + G    +ISS I  Y  ++PN++VE
Sbjct: 369  LAKVSGSKYISNIFKSLGRLELENYAEKLLQGMRSKGCADGNISSLILYYAANIPNIMVE 428

Query: 1652 DVISKFINTHQKLGIAASIASYEKLISLCCSSNKVCVSLDIVDHMYKSGLCVPIEVLSPI 1473
            D++  F   H+K  +A SIA Y+K+IS+CC+S+K+ ++L++ D M KS   VPIE   PI
Sbjct: 429  DMLVAFHKWHEKFEVAPSIAVYDKIISICCNSSKIGLALEVADCMCKSSSNVPIESFHPI 488

Query: 1472 LHACEQSGQLEMVHPIFLVMRQHNLQPTEDTLKRIIHLYMKMKDFEGAYNVIIDAQEMNV 1293
            +HACEQ G+L M  P++ ++RQHNL+   +T + +I L++KMKDFEGAYN++ DA+E   
Sbjct: 489  IHACEQRGELHMARPMYNLIRQHNLKLKSETFRSMISLFVKMKDFEGAYNILTDAEESGE 548

Query: 1292 MPTTAMYNAIMAGYFREKNNHRALMVLKQIEHANLKPDSETYSYLIANCECEEDIVKYRE 1113
            + T ++YNAIM GY+REKN++ A MV+ Q++ A +KPDSET+SYLI NCE EEDI KY +
Sbjct: 549  LSTVSLYNAIMLGYYREKNHNGAQMVMSQMQIAGVKPDSETFSYLIVNCESEEDISKYHD 608

Query: 1112 QMCCSEVGFTKYIYMSLVNAYAKFGNFEMAKQIILNKEIPVNYLNEINGVLMSALASNGQ 933
            Q+    +  T+ IYM+L+NAYA+ GNF+MAKQ++L+KEIP   LN+    L+ ALASNGQ
Sbjct: 609  QLRQDGIQMTRNIYMALINAYARLGNFDMAKQVLLDKEIPRKLLNDTKSALVGALASNGQ 668

Query: 932  IHDALGIYAEIKQSRANIEPKAVISLLEHLQTXXXXXXXXXXXXXLKDSNSWFDGCSRVI 753
            + DAL +Y +IKQS  +IEP+A I+L+EH++T             L DS+SWF+GC RVI
Sbjct: 669  VLDALHMYDDIKQSGGSIEPRAAIALIEHIRTEGELDRMHQLLDELNDSSSWFEGCGRVI 728

Query: 752  LYCIQYNLTGSAXXXXXXXXXKDVSSANLIIGQMFSQIFKTP-TNLKSGFELLQGVKELG 576
            LYC+Q+N   +A         KD  S  +++ Q+F QI++   TNL  G  LL  VKELG
Sbjct: 729  LYCVQHNYPDAAIDLLKQLKEKDEMSTYMVVDQVFGQIWEMEITNLDLGMVLLHAVKELG 788

Query: 575  LHPSRTCLDFLLSTCVKAENSQMAWRVWSEYETSGLAYNSLTFIRMYQALLASKEFAAAK 396
            L+ SRT LDFLLS CVK +N Q A ++WSEYE++G+++N LT +RMYQALL+S  + AAK
Sbjct: 789  LNVSRTSLDFLLSACVKLKNLQCAQQIWSEYESAGVSHNVLTSLRMYQALLSSGCWKAAK 848

Query: 395  ELLKRIPIEDRHVQYLINACETRYC 321
            +LLK I  ED HV+Y+INAC   YC
Sbjct: 849  KLLKTISKEDEHVRYIINACHMTYC 873


>ref|XP_004951985.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
            mitochondrial-like isoform X2 [Setaria italica]
          Length = 916

 Score =  706 bits (1822), Expect = 0.0
 Identities = 364/745 (48%), Positives = 517/745 (69%), Gaps = 5/745 (0%)
 Frame = -2

Query: 2540 DRDKATTA--PHSSRDSTGDMPFKN-VLDFPWF-SNGSQNCTTQSKKILLRERKKKYIFK 2373
            D ++AT +  P    +  G++   N +LDF WF S  S++     ++ + RE+KK+YIFK
Sbjct: 131  DVEEATPSEVPVEDSEDAGEVATSNKILDFEWFQSPPSKDPLMHWRREVAREKKKQYIFK 190

Query: 2372 NVESRRFIELMKKCADKLGTESTLQFFEKLGRETGVKEYNTLIKLCIDKARGCRKEEDSL 2193
            NVESRR+ +LM+ CA+KLGT+ST++FF KLGRETGVKE+N+LIKLC++KAR C   + + 
Sbjct: 191  NVESRRYTKLMQLCANKLGTKSTIEFFGKLGRETGVKEFNSLIKLCLNKARACNDVDSAA 250

Query: 2192 VYINKVHGLFLSMIEKGMPIEEESYGPLLNYMIDKKILLGFQMFIELFKNEIPDCSRIGY 2013
             YI + + LF +M +KG+ IE++ YGP L Y++D  +L  F+MF   FK+  P  SRI Y
Sbjct: 251  EYIYRAYRLFETMRDKGLMIEQDIYGPFLLYLVDVGLLEEFEMFTAFFKDANPQSSRIAY 310

Query: 2012 YEMVFWIMVGNEEKIEELLDLVKVGSFEDKYPFIESYLLAFCRSGSDRKKDLLQLLEIVD 1833
            YEM+ +I V +EEKI+EL   V+  + E  Y   ESY+LAF  S   RK+DL+ LL+++D
Sbjct: 311  YEMLRYIRVQDEEKIQELCHSVENYNEEAHYDIAESYMLAFAESS--RKEDLIALLDLLD 368

Query: 1832 MGRISSPKCIECVFRSLGTLQLEDLAEKYFFELNTAGLWKEDISSFICKYVTSLPNLVVE 1653
            + ++S  K I  +F+SLG L+LE+ AEK    + + G    +ISS I  Y  ++PN++VE
Sbjct: 369  LAKVSGSKYISNIFKSLGRLELENYAEKLLQGMRSKGCADGNISSLILYYAANIPNIMVE 428

Query: 1652 DVISKFINTHQKLGIAASIASYEKLISLCCSSNKVCVSLDIVDHMYKSGLCVPIEVLSPI 1473
            D++  F   H+K  +A SIA Y+K+IS+CC+S+K+ ++L++ D M KS   VPIE   PI
Sbjct: 429  DMLVAFHKWHEKFEVAPSIAVYDKIISICCNSSKIGLALEVADCMCKSSSNVPIESFHPI 488

Query: 1472 LHACEQSGQLEMVHPIFLVMRQHNLQPTEDTLKRIIHLYMKMKDFEGAYNVIIDAQEMNV 1293
            +HACEQ G+L M  P++ ++RQHNL+   +T + +I L++KMKDFEGAYN++ DA+E   
Sbjct: 489  IHACEQRGELHMARPMYNLIRQHNLKLKSETFRSMISLFVKMKDFEGAYNILTDAEESGE 548

Query: 1292 MPTTAMYNAIMAGYFREKNNHRALMVLKQIEHANLKPDSETYSYLIANCECEEDIVKYRE 1113
            + T ++YNAIM GY+REKN++ A MV+ Q++ A +KPDSET+SYLI NCE EEDI KY +
Sbjct: 549  LSTVSLYNAIMLGYYREKNHNGAQMVMSQMQIAGVKPDSETFSYLIVNCESEEDISKYHD 608

Query: 1112 QMCCSEVGFTKYIYMSLVNAYAKFGNFEMAKQIILNKEIPVNYLNEINGVLMSALASNGQ 933
            Q+    +  T+ IYM+L+NAYA+ GNF+MAKQ++L+KEIP   LN+    L+ ALASNGQ
Sbjct: 609  QLRQDGIQMTRNIYMALINAYARLGNFDMAKQVLLDKEIPRKLLNDTKSALVGALASNGQ 668

Query: 932  IHDALGIYAEIKQSRANIEPKAVISLLEHLQTXXXXXXXXXXXXXLKDSNSWFDGCSRVI 753
            + DAL +Y +IKQS  +IEP+A I+L+EH++T             L DS+SWF+GC RVI
Sbjct: 669  VLDALHMYDDIKQSGGSIEPRAAIALIEHIRTEGELDRMHQLLDELNDSSSWFEGCGRVI 728

Query: 752  LYCIQYNLTGSAXXXXXXXXXKDVSSANLIIGQMFSQIFKTP-TNLKSGFELLQGVKELG 576
            LYC+Q+N   +A         KD  S  +++ Q+F QI++   TNL  G  LL  VKELG
Sbjct: 729  LYCVQHNYPDAAIDLLKQLKEKDEMSTYMVVDQVFGQIWEMEITNLDLGMVLLHAVKELG 788

Query: 575  LHPSRTCLDFLLSTCVKAENSQMAWRVWSEYETSGLAYNSLTFIRMYQALLASKEFAAAK 396
            L+ SRT LDFLLS CVK +N Q A ++WSEYE++G+++N LT +RMYQALL+S  + AAK
Sbjct: 789  LNVSRTSLDFLLSACVKLKNLQCAQQIWSEYESAGVSHNVLTSLRMYQALLSSGCWKAAK 848

Query: 395  ELLKRIPIEDRHVQYLINACETRYC 321
            +LLK I  ED HV+Y+INAC   YC
Sbjct: 849  KLLKTISKEDEHVRYIINACHMTYC 873


>ref|XP_004951984.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
            mitochondrial-like isoform X1 [Setaria italica]
          Length = 918

 Score =  706 bits (1822), Expect = 0.0
 Identities = 364/745 (48%), Positives = 517/745 (69%), Gaps = 5/745 (0%)
 Frame = -2

Query: 2540 DRDKATTA--PHSSRDSTGDMPFKN-VLDFPWF-SNGSQNCTTQSKKILLRERKKKYIFK 2373
            D ++AT +  P    +  G++   N +LDF WF S  S++     ++ + RE+KK+YIFK
Sbjct: 131  DVEEATPSEVPVEDSEDAGEVATSNKILDFEWFQSPPSKDPLMHWRREVAREKKKQYIFK 190

Query: 2372 NVESRRFIELMKKCADKLGTESTLQFFEKLGRETGVKEYNTLIKLCIDKARGCRKEEDSL 2193
            NVESRR+ +LM+ CA+KLGT+ST++FF KLGRETGVKE+N+LIKLC++KAR C   + + 
Sbjct: 191  NVESRRYTKLMQLCANKLGTKSTIEFFGKLGRETGVKEFNSLIKLCLNKARACNDVDSAA 250

Query: 2192 VYINKVHGLFLSMIEKGMPIEEESYGPLLNYMIDKKILLGFQMFIELFKNEIPDCSRIGY 2013
             YI + + LF +M +KG+ IE++ YGP L Y++D  +L  F+MF   FK+  P  SRI Y
Sbjct: 251  EYIYRAYRLFETMRDKGLMIEQDIYGPFLLYLVDVGLLEEFEMFTAFFKDANPQSSRIAY 310

Query: 2012 YEMVFWIMVGNEEKIEELLDLVKVGSFEDKYPFIESYLLAFCRSGSDRKKDLLQLLEIVD 1833
            YEM+ +I V +EEKI+EL   V+  + E  Y   ESY+LAF  S   RK+DL+ LL+++D
Sbjct: 311  YEMLRYIRVQDEEKIQELCHSVENYNEEAHYDIAESYMLAFAESS--RKEDLIALLDLLD 368

Query: 1832 MGRISSPKCIECVFRSLGTLQLEDLAEKYFFELNTAGLWKEDISSFICKYVTSLPNLVVE 1653
            + ++S  K I  +F+SLG L+LE+ AEK    + + G    +ISS I  Y  ++PN++VE
Sbjct: 369  LAKVSGSKYISNIFKSLGRLELENYAEKLLQGMRSKGCADGNISSLILYYAANIPNIMVE 428

Query: 1652 DVISKFINTHQKLGIAASIASYEKLISLCCSSNKVCVSLDIVDHMYKSGLCVPIEVLSPI 1473
            D++  F   H+K  +A SIA Y+K+IS+CC+S+K+ ++L++ D M KS   VPIE   PI
Sbjct: 429  DMLVAFHKWHEKFEVAPSIAVYDKIISICCNSSKIGLALEVADCMCKSSSNVPIESFHPI 488

Query: 1472 LHACEQSGQLEMVHPIFLVMRQHNLQPTEDTLKRIIHLYMKMKDFEGAYNVIIDAQEMNV 1293
            +HACEQ G+L M  P++ ++RQHNL+   +T + +I L++KMKDFEGAYN++ DA+E   
Sbjct: 489  IHACEQRGELHMARPMYNLIRQHNLKLKSETFRSMISLFVKMKDFEGAYNILTDAEESGE 548

Query: 1292 MPTTAMYNAIMAGYFREKNNHRALMVLKQIEHANLKPDSETYSYLIANCECEEDIVKYRE 1113
            + T ++YNAIM GY+REKN++ A MV+ Q++ A +KPDSET+SYLI NCE EEDI KY +
Sbjct: 549  LSTVSLYNAIMLGYYREKNHNGAQMVMSQMQIAGVKPDSETFSYLIVNCESEEDISKYHD 608

Query: 1112 QMCCSEVGFTKYIYMSLVNAYAKFGNFEMAKQIILNKEIPVNYLNEINGVLMSALASNGQ 933
            Q+    +  T+ IYM+L+NAYA+ GNF+MAKQ++L+KEIP   LN+    L+ ALASNGQ
Sbjct: 609  QLRQDGIQMTRNIYMALINAYARLGNFDMAKQVLLDKEIPRKLLNDTKSALVGALASNGQ 668

Query: 932  IHDALGIYAEIKQSRANIEPKAVISLLEHLQTXXXXXXXXXXXXXLKDSNSWFDGCSRVI 753
            + DAL +Y +IKQS  +IEP+A I+L+EH++T             L DS+SWF+GC RVI
Sbjct: 669  VLDALHMYDDIKQSGGSIEPRAAIALIEHIRTEGELDRMHQLLDELNDSSSWFEGCGRVI 728

Query: 752  LYCIQYNLTGSAXXXXXXXXXKDVSSANLIIGQMFSQIFKTP-TNLKSGFELLQGVKELG 576
            LYC+Q+N   +A         KD  S  +++ Q+F QI++   TNL  G  LL  VKELG
Sbjct: 729  LYCVQHNYPDAAIDLLKQLKEKDEMSTYMVVDQVFGQIWEMEITNLDLGMVLLHAVKELG 788

Query: 575  LHPSRTCLDFLLSTCVKAENSQMAWRVWSEYETSGLAYNSLTFIRMYQALLASKEFAAAK 396
            L+ SRT LDFLLS CVK +N Q A ++WSEYE++G+++N LT +RMYQALL+S  + AAK
Sbjct: 789  LNVSRTSLDFLLSACVKLKNLQCAQQIWSEYESAGVSHNVLTSLRMYQALLSSGCWKAAK 848

Query: 395  ELLKRIPIEDRHVQYLINACETRYC 321
            +LLK I  ED HV+Y+INAC   YC
Sbjct: 849  KLLKTISKEDEHVRYIINACHMTYC 873


>dbj|BAD07992.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
            sativa Japonica Group] gi|222622115|gb|EEE56247.1|
            hypothetical protein OsJ_05263 [Oryza sativa Japonica
            Group]
          Length = 889

 Score =  656 bits (1692), Expect = 0.0
 Identities = 343/740 (46%), Positives = 487/740 (65%), Gaps = 3/740 (0%)
 Frame = -2

Query: 2531 KATTAPHSSRDSTGDMPFKNVLDFPWFSNGS-QNCTTQSKKILLRERKKKYIFKNVESRR 2355
            +   AP    +   +     +LD  WF+     N     +K + RE+KK+YIFKN ESRR
Sbjct: 105  RGAQAPPEESEDAEESVVNRILDTEWFAAPPPSNPLAAWRKEVAREKKKRYIFKNTESRR 164

Query: 2354 FIELMKKCADKLGTESTLQFFEKLGRETGVKEYNTLIKLCIDKARGCRKEEDSLVYINKV 2175
            F  LM+KCADKLG E  L+FF KLGR+TG KE+N LI++C+ KA+ C   + ++ +I + 
Sbjct: 165  FTRLMQKCADKLGAEPALEFFGKLGRDTGAKEFNALIRICLGKAKECMDIDSAVEHIYRA 224

Query: 2174 HGLFLSMIEKGMPIEEESYGPLLNYMIDKKILLGFQMFIELFKNEIP-DCSRIGYYEMVF 1998
            + LF  M E+G  I E+ YGP L Y++D  +   F MF   FK+  P   SRI YYEM+ 
Sbjct: 225  YRLFELMRERGYQIVEDCYGPFLLYLVDVGMSEEFDMFSVFFKDANPRSSSRIAYYEMLL 284

Query: 1997 WIMVGNEEKIEELLDLVKVGSFEDKYPFIESYLLAFCRSGSDRKKDLLQLLEIVDMGRIS 1818
            WI   +EEKI+EL   V+  + E  Y   ESY+LAF  S  DR+ D + LLE +D  RI 
Sbjct: 285  WIRAQDEEKIQELCRSVEDFNEEGDYDMAESYMLAFAES--DRRLDFISLLESLDPTRIL 342

Query: 1817 SPKCIECVFRSLGTLQLEDLAEKYFFELNTAGLWKEDISSFICKYVTSLPNLVVEDVISK 1638
              K +  +F+SLG L+L++ AEK   ++ +        SS I +Y +++PN+ VEDVI  
Sbjct: 343  RSKYLLTIFQSLGRLELKNYAEKLLQQMRSKESGVGKFSSIIFEYASNIPNIAVEDVIVS 402

Query: 1637 FINTHQKLGIAASIASYEKLISLCCSSNKVCVSLDIVDHMYKSGLCVPIEVLSPILHACE 1458
            F   H++  +A SI++ EK+IS+CC S+K+ ++LD+ + + KS   +P+E+  PI+ ACE
Sbjct: 403  FNRWHEQFEVAPSISASEKIISVCCKSSKISLALDVAECLCKSNPDMPVELFHPIIQACE 462

Query: 1457 QSGQLEMVHPIFLVMRQHNLQPTEDTLKRIIHLYMKMKDFEGAYNVIIDAQEMNVMPTTA 1278
            Q  +  +VHPI+ +MR+H ++   +T + +I+L +KMKDFEGAY ++ DA+E   + T +
Sbjct: 463  QGSEFHLVHPIYDLMRRHKMKLKTETFRNMINLCVKMKDFEGAYRILTDAEESGDISTVS 522

Query: 1277 MYNAIMAGYFREKNNHRALMVLKQIEHANLKPDSETYSYLIANCECEEDIVKYREQMCCS 1098
            +YNAIM GYFREKN++ A MV+ Q++ A +KPDSETY YLI NCE EE I +Y +Q+   
Sbjct: 523  LYNAIMLGYFREKNHNGAQMVMAQMQIAGVKPDSETYCYLIFNCEFEEKISEYLDQLRQD 582

Query: 1097 EVGFTKYIYMSLVNAYAKFGNFEMAKQIILNKEIPVNYLNEINGVLMSALASNGQIHDAL 918
             +  +K+IYMSLV+AYA+ GNF+MAKQ++ NKEIP  YLNEI   L+ ALASNG++ D L
Sbjct: 583  GIHMSKHIYMSLVSAYARLGNFDMAKQVLENKEIPPKYLNEIKSALIGALASNGKVLDGL 642

Query: 917  GIYAEIKQSRANIEPKAVISLLEHLQTXXXXXXXXXXXXXLKDSNSWFDGCSRVILYCIQ 738
             +Y EIKQS  ++EPK+ I+L+E+ QT             L DSN WFDGCSRV+LYC+Q
Sbjct: 643  IMYDEIKQSGCHLEPKSAIALIENTQTKGELDRLYQLLEELGDSNMWFDGCSRVLLYCVQ 702

Query: 737  YNLTGSAXXXXXXXXXKDVSSANLIIGQMFSQIF-KTPTNLKSGFELLQGVKELGLHPSR 561
            +N   +A         KD  S  ++I Q+FSQI+   P NL  G ++L  VKELGL+ SR
Sbjct: 703  HNHPNAAIGLLKQLKEKDELSTYMVIDQVFSQIWDMDPVNLDFGMKILHAVKELGLNVSR 762

Query: 560  TCLDFLLSTCVKAENSQMAWRVWSEYETSGLAYNSLTFIRMYQALLASKEFAAAKELLKR 381
            T LDFLLS CVKA++S  A  +W+EYE++GL +N LT +RMYQALL S++  A K+LL++
Sbjct: 763  TSLDFLLSACVKAKDSNRAQLIWTEYESAGLPHNVLTSLRMYQALLLSQKKKATKKLLRK 822

Query: 380  IPIEDRHVQYLINACETRYC 321
            IP ED HV+Y+I++C+  YC
Sbjct: 823  IPKEDVHVRYIIDSCQMAYC 842


>ref|XP_006648286.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
            mitochondrial-like [Oryza brachyantha]
          Length = 880

 Score =  639 bits (1647), Expect = e-180
 Identities = 334/744 (44%), Positives = 485/744 (65%), Gaps = 4/744 (0%)
 Frame = -2

Query: 2540 DRDKATTAPHSSRDSTGDMPFKNVLDFPWFS--NGSQNCTTQSKKILLRERKKKYIFKNV 2367
            +  +A   P    +         +L   WF+    S+  TT  ++ + RERKK+YIFKN 
Sbjct: 99   EESRAVEEPMEDSEDAEKFVVNKILGTEWFAVPPPSKPLTTW-RRAVARERKKRYIFKNT 157

Query: 2366 ESRRFIELMKKCADKLGTESTLQFFEKLGRETGVKEYNTLIKLCIDKARGCRKEEDSLVY 2187
            ESRRF  LM++CA KLG E  L+FF KLGR+TG KE+N LI++C+ KA+ C   + ++ +
Sbjct: 158  ESRRFTRLMQECARKLGAEPALEFFGKLGRDTGTKEFNALIRICLRKAKACSDIDSAVEH 217

Query: 2186 INKVHGLFLSMIEKGMPIEEESYGPLLNYMIDKKILLGFQMFIELFKNEIPDC-SRIGYY 2010
            I + + LF  M ++G  I E++YGP L Y++D  +   F+MF    K+  P   SRI YY
Sbjct: 218  IYRAYHLFEMMRDRGFQIVEDNYGPFLLYLVDVGMSEEFEMFSVFLKDANPQSNSRIAYY 277

Query: 2009 EMVFWIMVGNEEKIEELLDLVKVGSFEDKYPFIESYLLAFCRSGSDRKKDLLQLLEIVDM 1830
            EM+ WI   +EEKI++L   V+  + E +Y   ESY+LAF  S  DRK D + LLE +D 
Sbjct: 278  EMLLWIGAQDEEKIQQLCHSVEDFNKEGEYDMAESYMLAFAES--DRKLDFINLLESLDP 335

Query: 1829 GRISSPKCIECVFRSLGTLQLEDLAEKYFFELNTAGLWKEDISSFICKYVTSLPNLVVED 1650
             ++   K +  +F+ LG  +L++ AEK   ++ +      D SS +C+Y  ++P++ VED
Sbjct: 336  TKVICSKYLSTIFQFLGRFELKNYAEKLLKQMRSKESNIGDFSSILCEYAANIPHIEVED 395

Query: 1649 VISKFINTHQKLGIAASIASYEKLISLCCSSNKVCVSLDIVDHMYKSGLCVPIEVLSPIL 1470
            VI  F   H++  +A SI++ EK+IS+CC S+K+ ++LD+V+ + KS    P+E+  PI+
Sbjct: 396  VIVSFNRWHEQFEVAPSISASEKIISICCKSSKIALALDVVECLCKSNPDAPVELFHPII 455

Query: 1469 HACEQSGQLEMVHPIFLVMRQHNLQPTEDTLKRIIHLYMKMKDFEGAYNVIIDAQEMNVM 1290
            HACEQ  +  MVH I+ +MR+H L+   +  + +I+L +KMKDFEGAYN++ DA+E   +
Sbjct: 456  HACEQDSEFHMVHRIYDLMRRHKLKLKYEMFRSMINLCVKMKDFEGAYNILADAEESRDI 515

Query: 1289 PTTAMYNAIMAGYFREKNNHRALMVLKQIEHANLKPDSETYSYLIANCECEEDIVKYREQ 1110
             T ++YNAIM GYFREKN++ A MV+ Q++ A +KPDSET+SYLI NCE EE I +Y +Q
Sbjct: 516  STVSLYNAIMLGYFREKNHNGAQMVMAQMQIAEVKPDSETFSYLIFNCESEEKISEYLDQ 575

Query: 1109 MCCSEVGFTKYIYMSLVNAYAKFGNFEMAKQIILNKEIPVNYLNEINGVLMSALASNGQI 930
            +    +  +K+IYMSLV+AYA+ GNF+MAKQ++ NK+IP  YLNEI   L+ ALASNG+ 
Sbjct: 576  IRQDGIYMSKHIYMSLVSAYARHGNFDMAKQVLQNKKIPPKYLNEIKSALVGALASNGKA 635

Query: 929  HDALGIYAEIKQSRANIEPKAVISLLEHLQTXXXXXXXXXXXXXLKDSNSWFDGCSRVIL 750
             D L +Y EI+QS  ++EPKA ++L+E+ QT             L DS  WFDGCSRV+L
Sbjct: 636  LDGLIMYDEIRQSGCHLEPKAAVTLIENTQTKGELDRLYQLLEELSDSTFWFDGCSRVLL 695

Query: 749  YCIQYNLTGSAXXXXXXXXXKDVSSANLIIGQMFSQIF-KTPTNLKSGFELLQGVKELGL 573
            YC+Q+N   +A         KD     ++I Q+F QI+   P NL  G E+L  +KELGL
Sbjct: 696  YCVQHNHPNAAIDLLKQLKEKDEMITYMVIDQVFCQIWDMDPVNLDIGMEILHSIKELGL 755

Query: 572  HPSRTCLDFLLSTCVKAENSQMAWRVWSEYETSGLAYNSLTFIRMYQALLASKEFAAAKE 393
            + SRT LDFLLS CVKA++S  A  +WS YE++GL +N LT +RMYQALL S++  AAK+
Sbjct: 756  NVSRTSLDFLLSACVKAKDSNRAQLIWSAYESAGLPHNVLTSLRMYQALLLSQKKKAAKK 815

Query: 392  LLKRIPIEDRHVQYLINACETRYC 321
            LL++IP  D HV+Y+I++C+  YC
Sbjct: 816  LLRKIPKADVHVRYVIDSCQMAYC 839


>ref|XP_003574111.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
            mitochondrial-like [Brachypodium distachyon]
          Length = 859

 Score =  634 bits (1634), Expect = e-179
 Identities = 328/745 (44%), Positives = 494/745 (66%), Gaps = 6/745 (0%)
 Frame = -2

Query: 2540 DRDKATTAPHSSRDSTGDMP---FKNVLDFPWFSNGS-QNCTTQSKKILLRERKKKYIFK 2373
            D ++ +    +S + +GD        +LD  WF+  +  +     +K + RE+KK+YIFK
Sbjct: 94   DDEEESREKDASAEESGDAEDAICNKILDMEWFAAPTPSSMMVHLRKEVAREKKKRYIFK 153

Query: 2372 NVESRRFIELMKKCADKLGTESTLQFFEKLGRETGVKEYNTLIKLCIDKARGCRKEEDSL 2193
            N ESRRF  +M+ CADKLG ES L+FF +LGRETG+KE+N LI++C++KAR C + + ++
Sbjct: 154  NTESRRFTRMMRMCADKLGAESALEFFGRLGRETGLKEFNALIRVCLEKARACGEVDSAV 213

Query: 2192 VYINKVHGLFLSMIEKGMPIEEESYGPLLNYMIDKKILLGFQMFIELFKNEIP-DCSRIG 2016
             +I + + LF  M ++G  IEEE YGP L Y++D  ++  F+MF   FK+  P   SRI 
Sbjct: 214  EHIFRAYRLFEMMNDRGYQIEEEIYGPFLLYLVDVGLMEEFEMFSAFFKDTNPRSYSRIA 273

Query: 2015 YYEMVFWIMVGNEEKIEELLDLVKVGSFEDKYPFIESYLLAFCRSGSDRKKDLLQLLEIV 1836
            YYEM+  I   +EE I++L   ++  + +  Y   ESY+LAF  + S+RK D + LLE++
Sbjct: 274  YYEMLVCIRTHDEENIQKLCHSLEDCNEKAHYGVAESYMLAF--ADSNRKMDFISLLELL 331

Query: 1835 DMGRISSPKCIECVFRSLGTLQLEDLAEKYFFELNTAGLWKEDISSFICKYVTSLPNLVV 1656
            D  ++S  K I  VF+S+G L+LE+ AEK   E+ +       +SS I +Y  ++PN+V 
Sbjct: 332  DPTKLSGSKYIYSVFKSMGRLELENHAEKLLQEMTSKEHADGKVSSLIFEYAANIPNIVA 391

Query: 1655 EDVISKFINTHQKLGIAASIASYEKLISLCCSSNKVCVSLDIVDHMYKSGLCVPIEVLSP 1476
            EDV++ F     K  +  S+ +Y+K+IS CC+S+K+ ++LD+ D + K    VPIE+L+P
Sbjct: 392  EDVVAAFNKWQDKFKLPPSVVAYDKIISFCCNSSKISLALDVADCICKYNPDVPIELLNP 451

Query: 1475 ILHACEQSGQLEMVHPIFLVMRQHNLQPTEDTLKRIIHLYMKMKDFEGAYNVIIDAQEMN 1296
            I+HACEQ  +L MV P++ +M +  L+   +T + +I++ +KMKDF GAY ++ DA+E  
Sbjct: 452  IIHACEQGYELHMVWPLYDLMSRQKLKLRIETFRSLINICVKMKDFGGAYKILTDAEESG 511

Query: 1295 VMPTTAMYNAIMAGYFREKNNHRALMVLKQIEHANLKPDSETYSYLIANCECEEDIVKYR 1116
               T ++YN IM GYFREK++  A MV++Q+++A +K DSET++YLI NC+ EE I KY 
Sbjct: 512  ETSTVSLYNVIMYGYFREKDHRGAQMVMEQMQNAGVKRDSETFNYLILNCDSEEKISKYI 571

Query: 1115 EQMCCSEVGFTKYIYMSLVNAYAKFGNFEMAKQIILNKEIPVNYLNEINGVLMSALASNG 936
            +++    +  TK  YM+L++ Y++FGNF+MAKQ++L+KEIP  YL E+   L+ ALASNG
Sbjct: 572  DEVRQDGIEMTKQTYMALISTYSRFGNFDMAKQVVLDKEIPPKYLGEVKSALVGALASNG 631

Query: 935  QIHDALGIYAEIKQSRANIEPKAVISLLEHLQTXXXXXXXXXXXXXLKDSNSWFDGCSRV 756
            ++ D L ++ EIKQS   +EPKA I+L+EH QT             L + +SWFDGCSRV
Sbjct: 632  KVSDGLDMFDEIKQSGGCLEPKAAIALIEHTQTEGKLDRLYQLLEDLSEPSSWFDGCSRV 691

Query: 755  ILYCIQYNLTGSAXXXXXXXXXKDVSSANLIIGQMFSQIFK-TPTNLKSGFELLQGVKEL 579
            +LYC+Q+N   +A         K+ +S  +++ Q+F QI++  P NL  G  LL  VKEL
Sbjct: 692  LLYCVQHNHPDAAVDLLKQLKEKNETSTYMVVDQVFCQIWEMEPVNLDVGMTLLHAVKEL 751

Query: 578  GLHPSRTCLDFLLSTCVKAENSQMAWRVWSEYETSGLAYNSLTFIRMYQALLASKEFAAA 399
            GL+ SRT LDFLLSTCVKA++S+ A ++W+EYE+SGL +N LT +RM QAL +S +  AA
Sbjct: 752  GLNLSRTSLDFLLSTCVKAKDSRRAHQIWTEYESSGLPHNVLTSLRMCQALFSSGQRTAA 811

Query: 398  KELLKRIPIEDRHVQYLINACETRY 324
             +LL++IPIED HV+Y+IN+C+  Y
Sbjct: 812  GKLLRKIPIEDHHVRYIINSCKMTY 836


>ref|XP_002279701.2| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
            mitochondrial-like [Vitis vinifera]
          Length = 848

 Score =  612 bits (1578), Expect = e-172
 Identities = 330/740 (44%), Positives = 469/740 (63%), Gaps = 12/740 (1%)
 Frame = -2

Query: 2507 SRDSTGDMPFKNVLDFPWFSNGSQNCTTQSKKILLRERKKKYIFKNVESRRFIELMKKCA 2328
            S+ +  + P + VLD PWF   S N  +  +K + RERK+K++FKN +  R   L+K CA
Sbjct: 90   SQLTNDEKPLEKVLDVPWFPTLSHNNISLRRKEVSRERKQKWVFKNTQGGRLDRLVKTCA 149

Query: 2327 DKLGTESTLQFFEKLGRETGVKEYNTLIKLCIDKARGCRKEEDSLVYINKVHGLFLSMIE 2148
             KLGTE+T+Q F KLGRETGVKEY  L+ +CI+KAR    EE SL  I K   LF  M E
Sbjct: 150  QKLGTEATIQVFGKLGRETGVKEYKALLGICIEKARTSDDEEASLEQIYKAFQLFEEMKE 209

Query: 2147 KGMPIEEESYGPLLNYMIDKKILLGFQMFIELFKNEIP-DCSRIGYYEMVFWIMVGNEEK 1971
            +G  IEEE+YGP   Y+ID  ++  F  F  +  +E     SR+GYYEM+ W+ V NEEK
Sbjct: 210  QGFHIEEETYGPFFMYLIDMGMIEEFHFFHGVITDENSRSLSRLGYYEMLLWVRVNNEEK 269

Query: 1970 IEELLDLVKVGSFEDK------YPFIESYLLAFCRSGSDRKKDLLQLLEIVDMGRISSPK 1809
            I+EL + +      DK          E+Y+LA C SG  RK++LL++LEI+D+ ++SS  
Sbjct: 270  IQELCNGIAADDGADKPNLTDTVYIAENYVLALCESG--RKEELLKVLEIIDITKVSSVD 327

Query: 1808 CIECVFRSLGTLQLEDLAEKYFFELNTAGLWKEDISSFICKYVTSLPNLVVEDVISKFIN 1629
             +  +F+SLG L L    EK+           E+IS FI  Y +++PNL VEDVI KF +
Sbjct: 328  YVASIFKSLGRLSLASFMEKFVSAFKACDYGAEEISDFIFYYASNMPNLAVEDVILKFKD 387

Query: 1628 THQKLGIAASIASYEKLISLCCSSNKVCVSLDIVDHMYKSGLCVPIEVLSPILHACEQSG 1449
             H +L +  S  SY KL++ CC S KV  +LDIVD M ++GL + IE+   IL A E+S 
Sbjct: 388  LHAQLVVTPSSTSYNKLVTYCCDSFKVHAALDIVDQMCEAGLTLSIEMFHSILRASEESF 447

Query: 1448 QLEMVHPIFLVMRQHNLQPTEDTLKRIIHLYMKMKDFEGAYNVIIDAQEMNVMPTTAMYN 1269
            +  +VH I+ V+   +L+P  +T + +I+L++KMKDF+GAY+++ D +++N+ PT  +YN
Sbjct: 448  EFNLVHRIYSVICHQSLEPNCETFRIMINLHVKMKDFDGAYDLLKDMKKINLTPTAGIYN 507

Query: 1268 AIMAGYFREKNNHRALMVLKQIEHANLKPDSETYSYLIANCECEEDIVKYREQMCCSEVG 1089
            AIM GYFREKN +  LMVLKQ+  A++KPDS+T+ YL+ NCECEEDI+KY E++ C+ V 
Sbjct: 508  AIMGGYFREKNIYGGLMVLKQMGDADVKPDSQTFCYLLNNCECEEDIIKYYEKLKCAGVQ 567

Query: 1088 FTKYIYMSLVNAYAKFGNFEMAKQIILNKEIPVNYLNEINGVLMSALASNGQIHDALGIY 909
             TK+++M+L+NAYA  G FE AKQ++L+K +P+  LNEI  VL+SALA +GQI DA  IY
Sbjct: 568  VTKHVFMALINAYASCGQFEKAKQVVLDKGVPIKSLNEIKSVLVSALALHGQISDAFDIY 627

Query: 908  AEIKQSRANIEPKAVISLLEHLQTXXXXXXXXXXXXXLKDSNSWFDGCSRVILYCIQYNL 729
             EIK S  N+EPKA+I L+E+ Q+             L D +   +G  R++LYC++YN 
Sbjct: 628  EEIKNSGFNLEPKAIILLIEYHQSEGDLTRLLQLLEELNDPDYRVEGSCRILLYCVRYNH 687

Query: 728  TGSA---XXXXXXXXXKDVSSANLIIGQMFSQIFK-TPTNLKSGFELLQGVK-ELGLHPS 564
              SA             +  +   I+ ++FS I +  P NLK G +LL  +K ELGL PS
Sbjct: 688  LSSAIDLLKQLKDTFHDNELAMEAILDEVFSLIAEIEPVNLKIGLDLLTAIKEELGLRPS 747

Query: 563  RTCLDFLLSTCVKAENSQMAWRVWSEYETSGLAYNSLTFIRMYQALLASKEFAAAKELLK 384
            R  LDFLL+ CV  ++   +  +W EY+T+G  +N L+F+RMYQA LA  +  +A  +L 
Sbjct: 748  RKSLDFLLAACVNGKDLDNSRLIWREYQTAGFTHNVLSFLRMYQACLACGDHKSAANILH 807

Query: 383  RIPIEDRHVQYLINACETRY 324
            +IP +D HV  +I AC+T Y
Sbjct: 808  KIPKDDPHVCCVIKACQTTY 827


>gb|EMJ15850.1| hypothetical protein PRUPE_ppa001961mg [Prunus persica]
          Length = 736

 Score =  608 bits (1567), Expect = e-171
 Identities = 329/715 (46%), Positives = 462/715 (64%), Gaps = 14/715 (1%)
 Frame = -2

Query: 2417 KKILLRERKKKYIFKNVESRRFIELMKKCADKLGTESTLQFFEKLGRETGVKEYNTLIKL 2238
            +K + RERK+K+IFK+ +  RF  L+  CAD+LGT +T+Q F+KLGRE+GVKEYN LIK+
Sbjct: 3    RKEITRERKQKWIFKSSQVNRFGRLVNMCADRLGTHTTIQVFDKLGRESGVKEYNALIKI 62

Query: 2237 CIDKARGCRKEEDSLVYINKVHGLFLSMIEKGMPIEEESYGPLLNYMIDKKILLGFQMFI 2058
            CI++AR    E+  L  I+    +F SM E+G  +EEE+YG  L Y++D  +   FQ F 
Sbjct: 63   CIERARSSADEDVGLEQIHMAFQIFKSMKEQGFLLEEETYGQFLAYLVDMGMTEEFQFFC 122

Query: 2057 ELFKNEIPDC-SRIGYYEMVFWIMVGNEEKIEELLDLVKVGSFEDKYPFIESYLLAFCRS 1881
             + K E P   +R+GYYEM+ WI + +EEKI+EL + +            E+YLLA C S
Sbjct: 123  GVIKAENPSSVARLGYYEMLLWIRIDDEEKIQELCNYIVSDDEGTMSVLQENYLLALCES 182

Query: 1880 GSDRKKDLLQLLEIVDMGRISSPKCIECVFRSLGTLQLEDLAEKYFFELNTAGLWKEDIS 1701
              DRK+++LQLLEI+D+ +ISS  C+  +F  LG L LE  AEK+           E+I+
Sbjct: 183  --DRKEEILQLLEIMDITQISSLDCVASIFTCLGRLLLESYAEKFLLSFKACDHAAENIT 240

Query: 1700 SFICKYVTSLPNLVVEDVISKFINTHQKLGIAASIASYEKLISLCCSSNKVCVSLDIVDH 1521
            +FI  YV  +PNL VEDVIS F N H KL +  S A YEKLI  CC S KV  +L++V+ 
Sbjct: 241  NFISSYVVGIPNLAVEDVISNFKNWHMKLEVTPSSAGYEKLIMYCCESLKVHAALEMVEE 300

Query: 1520 MYKSGLCVPIEVLSPILHACEQSGQLEMVHPIFLVMRQHNLQPTEDTLKRIIHLYMKMKD 1341
            M + GL V I  L  IL A ++S    +V  ++ ++ ++ L+P  +T + +I L +KMKD
Sbjct: 301  MCERGLTVSIGALHSILRASDESCDFNLVRQMYSMISRYKLKPNGETFRSMITLCVKMKD 360

Query: 1340 FEGAYNVIIDAQEMNVMPTTAMYNAIMAGYFREKNNHRALMVLKQIEHANLKPDSETYSY 1161
            + GAY+++ D ++MN+ PT +MYNAIM G+FREKN +  L V KQ++ A ++PDS+T+SY
Sbjct: 361  YGGAYDMLSDLEKMNLTPTASMYNAIMLGFFREKNIYGGLRVFKQMKEAYVQPDSQTFSY 420

Query: 1160 LIANCECEEDIVKYREQMCCSEVGFTKYIYMSLVNAYAKFGNFEMAKQIILNKEIPVNYL 981
            LI+NC+ EEDI KY E+M  S +  TK I+M+LVNAYA  G FE AKQ++L+K IPV  L
Sbjct: 421  LISNCDSEEDINKYYEEMKRSGIQVTKQIFMALVNAYATCGQFEKAKQVVLDKGIPVKCL 480

Query: 980  NEINGVLMSALASNGQIHDALGIYAEIKQSRANIEPKAVISLLEHLQTXXXXXXXXXXXX 801
            NEI  VL+ +LAS+GQ+ DA  IY E+KQ+  ++EPKAVISL+EHLQ+            
Sbjct: 481  NEIKSVLVQSLASHGQLCDAFSIYEEMKQAGCSLEPKAVISLIEHLQSDEELSRLLPLLD 540

Query: 800  XLKDSNSWFDGCSRVILYCIQYNLTGSA---XXXXXXXXXKDVSSANLIIGQMFSQIFKT 630
             L D + WF+GC R ILYC++Y     A             D  +  +I  Q+F+ I ++
Sbjct: 541  ELDDPDYWFEGCLRTILYCVRYKHLRPALNLLKQLKDKICTDELALEVIFNQVFALIAES 600

Query: 629  -PTNLKSGFELLQGVK-ELGLHPSRTCLDFLLSTCVKAENSQMAWRVWSEYETSGLAYNS 456
              T+L+ G +LL  +K ELGL PSR CLDFLL  C  A++ + +  +W EYE +GL YN+
Sbjct: 601  ESTHLQLGLDLLHAIKNELGLTPSRKCLDFLLHACANAKDLRNSKLIWKEYEAAGLPYNT 660

Query: 455  LTFIRMYQALLASKEFAAAKELLKRIPIEDRHVQYLINACET--------RYCIG 315
            L+FIRMYQALLA+ +  A+K LL +IP +D HV+ +I AC+T        RYC+G
Sbjct: 661  LSFIRMYQALLAAGDCKASKILLSKIPKDDPHVRTIIKACKTIYSEGSKRRYCMG 715


>ref|XP_006360089.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
            mitochondrial-like isoform X1 [Solanum tuberosum]
            gi|565388658|ref|XP_006360090.1| PREDICTED:
            pentatricopeptide repeat-containing protein At4g04790,
            mitochondrial-like isoform X2 [Solanum tuberosum]
            gi|565388660|ref|XP_006360091.1| PREDICTED:
            pentatricopeptide repeat-containing protein At4g04790,
            mitochondrial-like isoform X3 [Solanum tuberosum]
          Length = 850

 Score =  607 bits (1565), Expect = e-171
 Identities = 327/748 (43%), Positives = 483/748 (64%), Gaps = 6/748 (0%)
 Frame = -2

Query: 2549 LCGDRDKATTAPHSSRDSTGDMPFKNVLDFPWFSNGSQNCTTQSKKILLRERKKKYIFKN 2370
            LCGD +   + P  S + +     +NVLD PW SN  +   +  +K + RERK+K+ FK+
Sbjct: 86   LCGDLNSYLSDPEESSNGSC---LENVLDVPWLSNVEKCNMSLRRKEIARERKEKWTFKS 142

Query: 2369 VESRRFIELMKKCADKLGTESTLQFFEKLGRETGVKEYNTLIKLCIDKARGCRKEEDSLV 2190
             +  RF +L+K+CA KLGT++T++ F KLGRETG+KEYN LI+LCI+KAR    EE SL 
Sbjct: 143  TQIGRFHQLVKQCACKLGTDTTIKVFGKLGRETGLKEYNALIRLCIEKARESNDEEVSLK 202

Query: 2189 YINKVHGLFLSMIEKGMPIEEESYGPLLNYMIDKKILLGFQMFIELFKNEIPDC-SRIGY 2013
             ++K + L  SM E+G  +EEESYG +L Y ID  ++  F  + EL  +   D  +R+ Y
Sbjct: 203  QLSKAYQLLKSMKEQGFQVEEESYGSILMYFIDFGMVQEFDFYCELIMDGNADSLARLAY 262

Query: 2012 YEMVFWIMVGNEEKIEELLDLVKVGSFEDKYPFIESYLLAFCRSGSDRKKDLLQLLEIVD 1833
            YEM+ W  V NE+KIEELL  + +    DK  F E+YLLA C S  DR +D ++LL  +D
Sbjct: 263  YEMLLWTKVENEDKIEELLYHLSLYDGADKSAFQENYLLALCES--DRVEDFVRLLRTID 320

Query: 1832 MGRISSPKCIECVFRSLGTLQLEDLAEKYFFELNTAGLWKEDISSFICKYVTSLPNLVVE 1653
            + ++SS   +  +F+ LG L LE  A+ +  EL T G+  +DIS FIC Y +S+P+  VE
Sbjct: 321  ITKVSSTDFVTNIFKFLGKLLLESFAKMFLQELVTIGIGAKDISKFICNYTSSMPS-AVE 379

Query: 1652 DVISKFINTHQKLGIAASIASYEKLISLCCSSNKVCVSLDIVDHMYKSGLCVPIEVLSPI 1473
            DVI +F N H +L I  + + Y+KLI  CC   KV  +LD+VD M+++GL + +E  + I
Sbjct: 380  DVILEFKNLHAELAIRPTSSQYQKLIMYCCELFKVHAALDMVDQMFEAGLTLSLETFNSI 439

Query: 1472 LHACEQSGQLEMVHPIFLVMRQHNLQPTEDTLKRIIHLYMKMKDFEGAYNVIIDAQEMNV 1293
            L AC++S +  +VH ++ ++  H+++P  +T + +I++ +++KDFEGAY ++ D ++ N+
Sbjct: 440  LEACDKSCEYNLVHRMYPMILCHDIKPNSETFRIMINMTVRIKDFEGAYGMLKDLEKFNM 499

Query: 1292 MPTTAMYNAIMAGYFREKNNHRALMVLKQIEHANLKPDSETYSYLIANCECEEDIVKYRE 1113
            MPTT MYNAIM GYFREK+   AL VLK++E AN+K DS+T+SYLI+NC  E++I K+ +
Sbjct: 500  MPTTNMYNAIMGGYFREKDTRAALGVLKRMEDANVKSDSQTFSYLISNCTTEDNISKFLD 559

Query: 1112 QMCCSEVGFTKYIYMSLVNAYAKFGNFEMAKQIILNKEIPVNYLNEINGVLMSALASNGQ 933
            +M  S V  TK++YM+L+N YA  G FE AKQ+I ++ +P    NEI  VL+SALAS+GQ
Sbjct: 560  EMKDSGVQLTKHVYMALINGYAASGQFEKAKQVICDRGVPAKGFNEIRSVLVSALASHGQ 619

Query: 932  IHDALGIYAEIKQSRANIEPKAVISLLEHLQTXXXXXXXXXXXXXLKDSNSWFDGCSRVI 753
            I DAL IY E+++++  +EPKAVI L+E+LQT             L   + W D   RVI
Sbjct: 620  ISDALDIYKEMEEAQCKLEPKAVICLIENLQTEGDLHRLLHLLEQLNGLDQWVDASYRVI 679

Query: 752  LYCIQYNLTGS---AXXXXXXXXXKDVSSANLIIGQMFSQIF-KTPTNLKSGFELLQGV- 588
             YCI+ N   S              D  +  ++  ++F QI  + P NL+ G +LLQ + 
Sbjct: 680  TYCIRKNHFRSIVNLLKRLVDAYKSDEVAKEVLFDEVFCQIAEQDPINLQLGLDLLQAIK 739

Query: 587  KELGLHPSRTCLDFLLSTCVKAENSQMAWRVWSEYETSGLAYNSLTFIRMYQALLASKEF 408
            KE+GL PSR  LDFLLS CV A++ Q  + +W EY+ +GL YN L+++RMY+ALLA  ++
Sbjct: 740  KEIGLLPSRQSLDFLLSACVNAKDLQACYLIWKEYKIAGLPYNILSYVRMYRALLALGDY 799

Query: 407  AAAKELLKRIPIEDRHVQYLINACETRY 324
             +A+ +LK IP +D HV  ++ AC+T +
Sbjct: 800  KSAENILKNIPRDDIHVCSVVKACQTAH 827


>ref|XP_006475231.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
            mitochondrial-like [Citrus sinensis]
          Length = 773

 Score =  604 bits (1558), Expect = e-170
 Identities = 325/733 (44%), Positives = 465/733 (63%), Gaps = 7/733 (0%)
 Frame = -2

Query: 2474 NVLDFPWFSNGSQNCTTQ-SKKILLRERKKKYIFKNVESRRFIELMKKCADKLGTESTLQ 2298
            +VL  PW S  S N  +   ++ + RERK+K++F N ++RRF  ++K CA++LGTE+T +
Sbjct: 27   DVLQMPWLSTRSNNDNSLLRRREIWRERKQKWVFSNGQTRRFSRIVKICANQLGTEATFE 86

Query: 2297 FFEKLGRETGVKEYNTLIKLCIDKARGCRKEEDSLVYINKVHGLFLSMIEKGMPIEEESY 2118
             F K+GRE GVKE+N+LI +CI+KAR C  E+ ++  I +   +F SM EKG  +EE +Y
Sbjct: 87   VFGKMGRENGVKEHNSLIGICIEKARACDDEDVAVEQICRAFQIFNSMKEKGFRLEEVTY 146

Query: 2117 GPLLNYMIDKKILLGFQMFIELFKN-EIPDCSRIGYYEMVFWIMVGNEEKIEELLDLVKV 1941
            GPLL Y ID  ++  F  F     N +     R+GYYEM+ WI V +EEKI EL      
Sbjct: 147  GPLLTYFIDMGMIEEFHFFCNTINNGDSSSVPRLGYYEMLLWIKVNDEEKIRELCKQTAA 206

Query: 1940 GSFEDKYPFIESYLLAFCRSGSDRKKDLLQLLEIVDMGRISSPKCIECVFRSLGTLQLED 1761
                +   F E+YLLA C S  DRK D+LQLLE +D+ +IS    +  +F+SLG L LE 
Sbjct: 207  EEDGNYLCFQENYLLALCES--DRKIDILQLLETIDIRKISLLDHLASIFKSLGRLLLES 264

Query: 1760 LAEKYFFELNTAGLWKEDISSFICKYVTSLPNLVVEDVISKFINTHQKLGIAASIASYEK 1581
             AEKY     T+    ++ S  I  YVT +PNL VED+ SKF   H KL I  S ASY+K
Sbjct: 265  DAEKYILAFKTSDDGAKNASYLIVSYVTGIPNLEVEDIFSKFKGMHAKLEITPSSASYKK 324

Query: 1580 LISLCCSSNKVCVSLDIVDHMYKSGLCVPIEVLSPILHACEQSGQLEMVHPIFLVMRQHN 1401
            LI+  C   KV V+LD+V+ M +  L    E ++ ILHACE+S +  +V  I+ ++  HN
Sbjct: 325  LITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVRRIYPMICHHN 384

Query: 1400 LQPTEDTLKRIIHLYMKMKDFEGAYNVIIDAQEMNVMPTTAMYNAIMAGYFREKNNHRAL 1221
            L+P  +T + +I L +K+KDF+ AY+++ D +EMN+MPT +MYNAIMAGYFR+K+   AL
Sbjct: 385  LKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYFRKKDVQGAL 444

Query: 1220 MVLKQIEHANLKPDSETYSYLIANCECEEDIVKYREQMCCSEVGFTKYIYMSLVNAYAKF 1041
            MVLK++E AN+KPDS+T+SYLI NC  EEDI+KY EQ+  +    TKY++M+L+NAY   
Sbjct: 445  MVLKEMEQANVKPDSQTFSYLIHNCSNEEDIIKYYEQLKSAGGQITKYVFMALINAYTTC 504

Query: 1040 GNFEMAKQIILNKEIPVNYLNEINGVLMSALASNGQIHDALGIYAEIKQSRANIEPKAVI 861
            G FE A+Q++L+ EIPV   +E+   L+SALAS+G+  DA+ +Y EIK++  N+EP+AVI
Sbjct: 505  GEFEKARQVVLDAEIPVKSRSEVKSALVSALASHGRTSDAIIVYEEIKEAGCNLEPRAVI 564

Query: 860  SLLEHLQTXXXXXXXXXXXXXLKDSNSWFDGCSRVILYCIQYNLTGSA---XXXXXXXXX 690
            +L+EHL +             + D + W DGC R+IL+C+++    SA            
Sbjct: 565  ALIEHLNSEGELNRLIQLLEEVHDPDYWMDGCCRLILHCVRFKQLSSATDLLKQLKDKFK 624

Query: 689  KDVSSANLIIGQMFSQIFKT-PTNLKSGFELLQGVK-ELGLHPSRTCLDFLLSTCVKAEN 516
             D  +      ++F QI  T P +++ G +LLQ +K ELGL PSR CLDFLL  CV A +
Sbjct: 625  DDEMAMEYHFSEIFCQIATTDPPDVQIGLDLLQFIKDELGLPPSRKCLDFLLGACVNARD 684

Query: 515  SQMAWRVWSEYETSGLAYNSLTFIRMYQALLASKEFAAAKELLKRIPIEDRHVQYLINAC 336
             + A  +W EYE +GL YN L+++ MY+A LAS    +A +LL ++P +D HV+++I AC
Sbjct: 685  LKRAHLIWKEYENAGLPYNVLSYLWMYKAFLASGNRKSASKLLSKMPKDDPHVRFVIQAC 744

Query: 335  ETRYCIGC*SEER 297
            +  Y I    +ER
Sbjct: 745  KQTYTIPSLQKER 757


>ref|XP_006582247.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
            mitochondrial-like isoform X1 [Glycine max]
          Length = 840

 Score =  600 bits (1547), Expect = e-168
 Identities = 326/750 (43%), Positives = 467/750 (62%), Gaps = 8/750 (1%)
 Frame = -2

Query: 2549 LCGDRDKATTAPHSSRDSTGDMPFKNVLDFPWFSNGSQNCTTQSKKILLRERKKKYIFKN 2370
            LC   DK         D   +   K  +D PW  + S    ++ +K + RERK+K+IFK 
Sbjct: 74   LCSKEDKRCALEEIDDD---EEKRKQTVDIPWILDLSHGKLSEKRKDVARERKQKWIFKY 130

Query: 2369 VESRRFIELMKKCADKLGTESTLQFFEKLGRETGVKEYNTLIKLCIDKARGCRKEEDSLV 2190
                RF  L+K CADKLG   T+  F +LGRETGVKEYNTLIK+C+ KAR    E   + 
Sbjct: 131  TSDDRFDRLIKMCADKLGVGKTVNVFGQLGRETGVKEYNTLIKMCVKKARATDDEFIGVR 190

Query: 2189 YINKVHGLFLSMIEKGMPIEEESYGPLLNYMIDKKILLGFQMFIELFKNEIPD-CSRIGY 2013
             ++K   L+ SM + G P+EE++YGPLL Y++D  ++  FQ+F ++ K E P   SR+GY
Sbjct: 191  EMSKAFHLYKSMRDLGYPLEEKTYGPLLRYLVDMGLVQEFQLFTDIIKTENPSSASRLGY 250

Query: 2012 YEMVFWIMVGNEEKIEELLDLVKVGSFEDKYPFIESYLLAFCRSGSDRKKDLLQLLEIVD 1833
            YEM+ W+ VGNEE I ++ + + V + E+     ESYL+A C S  DRK  +L +++ +D
Sbjct: 251  YEMLLWLRVGNEEMIRDICEYITVEAREETSALRESYLMALCES--DRKMQILDVVKNID 308

Query: 1832 MGRISSPKCIECVFRSLGTLQLEDLAEKYFFELNTAGLWKEDISSFICKYVTSLPNLVVE 1653
            + ++SS K I  +F+SLG L LE +A+    +L       ++IS+FI  Y  S+PNL VE
Sbjct: 309  VTKLSSAKSIADIFQSLGRLHLESIADDLLLDLRACDHDADNISNFIVSYAVSIPNLAVE 368

Query: 1652 DVISKFINTHQKLGIAASIASYEKLISLCCSSNKVCVSLDIVDHMYKSGLCVPIEVLSPI 1473
            D+I KF N H+ L +  S +SYEKLI  CC  +KV ++LDIV+ M ++G  +  EVL  I
Sbjct: 369  DIIPKFKNMHELLEVLPSTSSYEKLILHCCGLDKVGIALDIVEKMCEAGFTLSTEVLQCI 428

Query: 1472 LHACEQSGQLEMVHPIFLVMRQHNLQPTEDTLKRIIHLYMKMKDFEGAYNVIIDAQEMNV 1293
            L  CE+S +  +VH I+ ++ +++L+   +  +R++H +++MKDFEGAY +I D ++MN 
Sbjct: 429  LQICEESYEYILVHRIYSIICRYHLELNGEICRRLVHFFVRMKDFEGAYRMIADLEDMNF 488

Query: 1292 MPTTAMYNAIMAGYFREKNNHRALMVLKQIEHANLKPDSETYSYLIANCECEEDIVKYRE 1113
             PTT MYNAIMAGYFREKN    L VL Q+  AN+KPDS T+ YLI NCE EEDI+KY E
Sbjct: 489  KPTTNMYNAIMAGYFREKNIRGGLRVLNQMRGANVKPDSHTFYYLIQNCETEEDIIKYCE 548

Query: 1112 QMCCSEVGFTKYIYMSLVNAYAKFGNFEMAKQIILNKEIPVNYLNEINGVLMSALASNGQ 933
            +M  S V  TK I+M+L+N+YA  G  E AKQ++L+  IP   LNEI  VL+SALAS+GQ
Sbjct: 549  EMKQSGVHATKQIFMALINSYAASGKLEKAKQVVLDSNIPNKSLNEIKSVLVSALASHGQ 608

Query: 932  IHDALGIYAEIKQSRANIEPKAVISLLEHL-QTXXXXXXXXXXXXXLKDSNSWFDGCSRV 756
            + +AL +Y EIK++  N+EPKAVI+L+E   +              + D + W DGC +V
Sbjct: 609  LSEALLVYEEIKKAGHNLEPKAVITLIEEFTKFNGELDGLLLLLEEMNDVDYWVDGCFKV 668

Query: 755  ILYCIQYNLTGSAXXXXXXXXXKDVSSANLIIGQMFSQIF-----KTPTNLKSGFELLQG 591
            I+YCI+ N   S+             + +L++  +F  +F        ++L+ G +LL  
Sbjct: 669  IMYCIR-NKNLSSTILLFKQLKDKFKNDDLVMEALFDAVFSLIASSESSHLQIGLDLLWA 727

Query: 590  VK-ELGLHPSRTCLDFLLSTCVKAENSQMAWRVWSEYETSGLAYNSLTFIRMYQALLASK 414
            +K ELGL PSR CLDFLLS C  A +   A  +W EYE +G  YN L+++RMYQALLA+ 
Sbjct: 728  IKDELGLMPSRQCLDFLLSACANAGDLNNARLIWREYEVAGFPYNVLSYLRMYQALLAAG 787

Query: 413  EFAAAKELLKRIPIEDRHVQYLINACETRY 324
            +  +A  +LK+IP +D  V  +I AC+  Y
Sbjct: 788  DDRSAHFMLKKIPQDDAEVCSVIIACQETY 817


>ref|XP_002319806.1| predicted protein [Populus trichocarpa]
          Length = 784

 Score =  599 bits (1544), Expect = e-168
 Identities = 324/734 (44%), Positives = 469/734 (63%), Gaps = 6/734 (0%)
 Frame = -2

Query: 2507 SRDSTGDMPFKNVLDFPWFSNGSQNCTTQSKKILLRERKKKYIFKNVESRRFIELMKKCA 2328
            S ++  +   K  L+ PW S    N     +K + RERK+K++F   +      ++  CA
Sbjct: 31   SEEAEDEELVKKALEIPWLSRLKNNNIGMLRKDVSRERKQKWVFTYSQVNHINRIVDTCA 90

Query: 2327 DKLGTESTLQFFEKLGRETGVKEYNTLIKLCIDKARGCRKEEDSLVYINKVHGLFLSMIE 2148
            DKLGT++ ++ F KLGRETG+KE+N L+K  I++ R    E  ++ +I+ V  LF SM E
Sbjct: 91   DKLGTDNAMEVFGKLGRETGLKEFNALMKKYIEQCRETDDESVAMKHISAVLQLFKSMKE 150

Query: 2147 KGMPIEEESYGPLLNYMIDKKILLGFQMFIELFKNEIPDCS-RIGYYEMVFWIMVGNEEK 1971
            +G  IEEE+YGP L  +IDK ++  F  F ++ K+  P  + R+GYY+M+ +I V +EEK
Sbjct: 151  QGFSIEEETYGPFLILLIDKGMVEEFHFFSDIIKDTNPSKNARLGYYDMLLYIGVNDEEK 210

Query: 1970 IEELLDLVKVGSFEDKYPFIESYLLAFCRSGSDRKKDLLQLLEIVDMGRISSPKCIECVF 1791
            I+EL + + +   ++     E+YLLA C S  D+K  LLQLLE +D+ + SS   +  +F
Sbjct: 211  IQELCNYICIDDGDNNISLRENYLLALCES--DQKNYLLQLLETMDITKFSSLDHLASIF 268

Query: 1790 RSLGTLQLEDLAEKYFFELNTAGLWKEDISSFICKYVTSLPNLVVEDVISKFINTHQKLG 1611
            +SLG L LE  A+K+   L +     EDIS+ I  Y TS+PNLVVEDV+SKF   H  + 
Sbjct: 269  KSLGRLSLESFAKKFLLVLKSCDYGAEDISTLIFSYATSIPNLVVEDVVSKFKTLHMIMK 328

Query: 1610 IAASIASYEKLISLCCSSNKVCVSLDIVDHMYKSGLCVPIEVLSPILHACEQSGQLEMVH 1431
            ++ S  SYEKL+   C+  KV ++LDIVD M K GL + I  +  IL+A E+S    +V 
Sbjct: 329  MSPSSTSYEKLVVYNCNLLKVHLALDIVDQMCKEGLTISINTIHSILNASEESFDFNLVR 388

Query: 1430 PIFLVMRQHNLQPTEDTLKRIIHLYMKMKDFEGAYNVIIDAQEMNVMPTTAMYNAIMAGY 1251
             I+ ++   +L P  +T + +I L +KMKDFEGAY ++ D +++N+ PT +MYNAIM GY
Sbjct: 389  RIYSLIYHLDLTPNNETFRSMISLSVKMKDFEGAYGLLDDLKKLNLAPTASMYNAIMGGY 448

Query: 1250 FREKNNHRALMVLKQIEHANLKPDSETYSYLIANCECEEDIVKYREQMCCSEVGFTKYIY 1071
            FREKN   ALMVLKQ++ A++KPDS +YSYLI+NC  EE+I+KY E+M  + +  +K I+
Sbjct: 449  FREKNIRGALMVLKQMKLADVKPDSSSYSYLISNCNNEEEIIKYYEEMKVAGIQVSKQIF 508

Query: 1070 MSLVNAYAKFGNFEMAKQIILNKEIPVNYLNEINGVLMSALASNGQIHDALGIYAEIKQS 891
            M+L+NAYA  G FE AKQ++L+KE P+ +LNEI  VL+SALAS+GQ+ DAL +Y E+KQ+
Sbjct: 509  MALINAYATCGQFEKAKQVLLDKEFPIKHLNEIRSVLVSALASHGQMTDALNLYEEMKQA 568

Query: 890  RANIEPKAVISLLEHLQTXXXXXXXXXXXXXLKDSNSWFDGCSRVILYCIQYNLTGSA-- 717
             +N+EPKAVISL+EH+ +             L D N W DGC RVILYCI+     SA  
Sbjct: 569  GSNLEPKAVISLIEHVDSEGEQSRLLKLLEELDDHNYWVDGCFRVILYCIRNKDLRSAVD 628

Query: 716  -XXXXXXXXXKDVSSANLIIGQMFSQIFKT-PTNLKSGFELLQGVK-ELGLHPSRTCLDF 546
                       D  +  ++  ++FSQ+ +T P N++ G +LLQ +K ELG  PSR CLDF
Sbjct: 629  LLKQLKDRFSDDELAMEVLFDEVFSQVAETEPANVRIGMDLLQAIKDELGASPSRKCLDF 688

Query: 545  LLSTCVKAENSQMAWRVWSEYETSGLAYNSLTFIRMYQALLASKEFAAAKELLKRIPIED 366
            LL+ CV A++   +  VW EY+ +GL YN  +++RMYQALLAS    +AK +L +IP +D
Sbjct: 689  LLTACVNAKDLGNSLLVWKEYQAAGLPYNVTSYLRMYQALLASGGHVSAKVMLNKIPKDD 748

Query: 365  RHVQYLINACETRY 324
             HV+ +I  C+  Y
Sbjct: 749  PHVRIVIQECQRTY 762


>gb|EOY12570.1| Tetratricopeptide repeat-like superfamily protein, putative isoform 2
            [Theobroma cacao]
          Length = 851

 Score =  596 bits (1536), Expect = e-167
 Identities = 328/736 (44%), Positives = 462/736 (62%), Gaps = 6/736 (0%)
 Frame = -2

Query: 2513 HSSRDSTGDMPFKNVLDFPWFSNGSQNCTTQSKKILLRERKKKYIFKNVESRRFIELMKK 2334
            +SS+DS         L  PW S  S N T+  +K + RERK+K++FK  +  RF  L+K 
Sbjct: 107  NSSKDSG------RALTIPWLSM-SNNKTSLMQKEVSRERKQKWVFKTSQVIRFNRLIKM 159

Query: 2333 CADKLGTESTLQFFEKLGRETGVKEYNTLIKLCIDKARGCRKEEDSLVYINKVHGLFLSM 2154
            C DKLGT++T++ F+KLGRETG+KEYN LI+LC++ AR    E+ +L +I++    F  M
Sbjct: 160  CGDKLGTKATMEVFDKLGRETGLKEYNALIELCLENARTSDDEDVALEHISEAFRTFKKM 219

Query: 2153 IEKGMPIEEESYGPLLNYMIDKKILLGFQMFIELFKNEIPDC-SRIGYYEMVFWIMVGNE 1977
             E+G  +EEE+ GP L Y ID+ ++  F  F    K+  P    R+GYYEM+ WI V NE
Sbjct: 220  RERGFQVEEETIGPFLMYFIDRGMVEEFFFFCGPIKDGNPSLLPRLGYYEMLLWIGVNNE 279

Query: 1976 EKIEELLDLVKVGSFEDKYPFIESYLLAFCRSGSDRKKDLLQLLEIVDMGRISSPKCIEC 1797
            +KI+EL + +      D +   E+YLLA C SG  RK+DL+QLLEI+D+ RISS   +  
Sbjct: 280  KKIQELCNYIAATDGIDDFELKENYLLALCESG--RKEDLMQLLEIIDIKRISSVNKVAN 337

Query: 1796 VFRSLGTLQLEDLAEKYFFELNTAGLWKEDISSFICKYVTSLPNLVVEDVISKFINTHQK 1617
            +F+SLG L LE  AEK+     +     E+IS  I  Y +S+PNL VED   KF + H+K
Sbjct: 338  IFKSLGRLSLESFAEKFLLAFKSCDYGMENISRLILSYASSIPNLKVEDTFLKFKSFHKK 397

Query: 1616 LGIAASIASYEKLISLCCSSNKVCVSLDIVDHMYKSGLCVPIEVLSPILHACEQSGQLEM 1437
              I  S ASYE LI+ CC  +KV V+LD+V+ M + GL +PIE L  IL+A E+S +  +
Sbjct: 398  FKIIPSSASYEMLITYCCDFHKVHVALDLVNEMCELGLSLPIETLHRILYASEESYEFHL 457

Query: 1436 VHPIFLVMRQHNLQPTEDTLKRIIHLYMKMKDFEGAYNVIIDAQEMNVMPTTAMYNAIMA 1257
            V  I+ V+  HNL+P  +T + +I L +KMKDFEGAY ++ D ++M VMPT ++YNAIMA
Sbjct: 458  VRQIYSVICLHNLKPNSETFRSMISLSVKMKDFEGAYAMLNDMKKMKVMPTASIYNAIMA 517

Query: 1256 GYFREKNNHRALMVLKQIEHANLKPDSETYSYLIANCECEEDIVKYREQMCCSEVGFTKY 1077
            GYFREKN+  AL VLK++E  ++KPD++T+SYLI NC+CEEDI KY E+M  + +  TK+
Sbjct: 518  GYFREKNSSAALKVLKKMECEDIKPDAQTFSYLIGNCDCEEDISKYYEEMKSAGIQVTKH 577

Query: 1076 IYMSLVNAYAKFGNFEMAKQIILNKEIPVNYLNEINGVLMSALASNGQIHDALGIYAEIK 897
            ++M+L+NAYA  G FE AKQ++L+K IP   L EI   L+SALASNGQ+ DAL IY EIK
Sbjct: 578  VFMALINAYATCGQFEKAKQVLLDKGIPFKSLKEIKSALVSALASNGQMCDALNIYKEIK 637

Query: 896  QSRANIEPKAVISLLEHLQTXXXXXXXXXXXXXLKDSNSWFDGCSRVILYCIQ---YNLT 726
            Q    +EPKAVISL+EH                L D + W D C R++L+C++      T
Sbjct: 638  QVGDTLEPKAVISLIEHFNLEGELSTLLQLLEELHDPDYWVDACCRIVLHCVKIKDLRST 697

Query: 725  GSAXXXXXXXXXKDVSSANLIIGQMFSQIFK-TPTNLKSGFELLQGVK-ELGLHPSRTCL 552
                         D    + +  ++FS I +     L  G  LLQ +K E+G+ PSR  L
Sbjct: 698  VDLLKRLKDKLHNDDLGIDFLCDEVFSLIAEGDAKELWFGLALLQAIKDEIGVIPSRKSL 757

Query: 551  DFLLSTCVKAENSQMAWRVWSEYETSGLAYNSLTFIRMYQALLASKEFAAAKELLKRIPI 372
            DFLL  C  A++ Q +  +W EY+ +GL+YN L+++ MYQALLA  +  +A  +  +IP 
Sbjct: 758  DFLLMACTNAKDLQNSLFIWKEYQLAGLSYNILSYLGMYQALLACGDLKSANIMRTKIPT 817

Query: 371  EDRHVQYLINACETRY 324
            +D H++ +I A +T Y
Sbjct: 818  DDPHIRLIIKAYQTTY 833


>ref|XP_006582248.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
            mitochondrial-like isoform X2 [Glycine max]
          Length = 826

 Score =  595 bits (1535), Expect = e-167
 Identities = 325/745 (43%), Positives = 462/745 (62%), Gaps = 3/745 (0%)
 Frame = -2

Query: 2549 LCGDRDKATTAPHSSRDSTGDMPFKNVLDFPWFSNGSQNCTTQSKKILLRERKKKYIFKN 2370
            LC   DK         D   +   K  +D PW  + S    ++ +K + RERK+K+IFK 
Sbjct: 74   LCSKEDKRCALEEIDDD---EEKRKQTVDIPWILDLSHGKLSEKRKDVARERKQKWIFKY 130

Query: 2369 VESRRFIELMKKCADKLGTESTLQFFEKLGRETGVKEYNTLIKLCIDKARGCRKEEDSLV 2190
                RF  L+K CADKLG   T+  F +LGRETGVKEYNTLIK+C+ KAR    E   + 
Sbjct: 131  TSDDRFDRLIKMCADKLGVGKTVNVFGQLGRETGVKEYNTLIKMCVKKARATDDEFIGVR 190

Query: 2189 YINKVHGLFLSMIEKGMPIEEESYGPLLNYMIDKKILLGFQMFIELFKNEIPD-CSRIGY 2013
             ++K   L+ SM + G P+EE++YGPLL Y++D  ++  FQ+F ++ K E P   SR+GY
Sbjct: 191  EMSKAFHLYKSMRDLGYPLEEKTYGPLLRYLVDMGLVQEFQLFTDIIKTENPSSASRLGY 250

Query: 2012 YEMVFWIMVGNEEKIEELLDLVKVGSFEDKYPFIESYLLAFCRSGSDRKKDLLQLLEIVD 1833
            YEM+ W+ VGNEE I ++ + + V + E+     ESYL+A C S  DRK  +L +++ +D
Sbjct: 251  YEMLLWLRVGNEEMIRDICEYITVEAREETSALRESYLMALCES--DRKMQILDVVKNID 308

Query: 1832 MGRISSPKCIECVFRSLGTLQLEDLAEKYFFELNTAGLWKEDISSFICKYVTSLPNLVVE 1653
            + ++SS K I  +F+SLG L LE +A+    +L       ++IS+FI  Y  S+PNL VE
Sbjct: 309  VTKLSSAKSIADIFQSLGRLHLESIADDLLLDLRACDHDADNISNFIVSYAVSIPNLAVE 368

Query: 1652 DVISKFINTHQKLGIAASIASYEKLISLCCSSNKVCVSLDIVDHMYKSGLCVPIEVLSPI 1473
            D+I KF N H+ L +  S +SYEKLI  CC  +KV ++LDIV+ M ++G  +  EVL  I
Sbjct: 369  DIIPKFKNMHELLEVLPSTSSYEKLILHCCGLDKVGIALDIVEKMCEAGFTLSTEVLQCI 428

Query: 1472 LHACEQSGQLEMVHPIFLVMRQHNLQPTEDTLKRIIHLYMKMKDFEGAYNVIIDAQEMNV 1293
            L  CE+S +  +VH I+ ++ +++L+   +  +R++H +++MKDFEGAY +I D ++MN 
Sbjct: 429  LQICEESYEYILVHRIYSIICRYHLELNGEICRRLVHFFVRMKDFEGAYRMIADLEDMNF 488

Query: 1292 MPTTAMYNAIMAGYFREKNNHRALMVLKQIEHANLKPDSETYSYLIANCECEEDIVKYRE 1113
             PTT MYNAIMAGYFREKN    L VL Q+  AN+KPDS T+ YLI NCE EEDI+KY E
Sbjct: 489  KPTTNMYNAIMAGYFREKNIRGGLRVLNQMRGANVKPDSHTFYYLIQNCETEEDIIKYCE 548

Query: 1112 QMCCSEVGFTKYIYMSLVNAYAKFGNFEMAKQIILNKEIPVNYLNEINGVLMSALASNGQ 933
            +M  S V  TK I+M+L+N+YA  G  E AKQ++L+  IP   LNEI  VL+SALAS+GQ
Sbjct: 549  EMKQSGVHATKQIFMALINSYAASGKLEKAKQVVLDSNIPNKSLNEIKSVLVSALASHGQ 608

Query: 932  IHDALGIYAEIKQSRANIEPKAVISLLEHL-QTXXXXXXXXXXXXXLKDSNSWFDGCSRV 756
            + +AL +Y EIK++  N+EPKAVI+L+E   +              + D + W DGC +V
Sbjct: 609  LSEALLVYEEIKKAGHNLEPKAVITLIEEFTKFNGELDGLLLLLEEMNDVDYWVDGCFKV 668

Query: 755  ILYCIQYNLTGSAXXXXXXXXXKDVSSANLIIGQMFSQIFKTPTNLKSGFELLQGVK-EL 579
            I+YCI+ N   S+             + +L++  +F  I         G +LL  +K EL
Sbjct: 669  IMYCIR-NKNLSSTILLFKQLKDKFKNDDLVMEALFDAI---------GLDLLWAIKDEL 718

Query: 578  GLHPSRTCLDFLLSTCVKAENSQMAWRVWSEYETSGLAYNSLTFIRMYQALLASKEFAAA 399
            GL PSR CLDFLLS C  A +   A  +W EYE +G  YN L+++RMYQALLA+ +  +A
Sbjct: 719  GLMPSRQCLDFLLSACANAGDLNNARLIWREYEVAGFPYNVLSYLRMYQALLAAGDDRSA 778

Query: 398  KELLKRIPIEDRHVQYLINACETRY 324
              +LK+IP +D  V  +I AC+  Y
Sbjct: 779  HFMLKKIPQDDAEVCSVIIACQETY 803


>ref|XP_002453263.1| hypothetical protein SORBIDRAFT_04g002710 [Sorghum bicolor]
            gi|241933094|gb|EES06239.1| hypothetical protein
            SORBIDRAFT_04g002710 [Sorghum bicolor]
          Length = 898

 Score =  595 bits (1535), Expect = e-167
 Identities = 323/745 (43%), Positives = 477/745 (64%), Gaps = 44/745 (5%)
 Frame = -2

Query: 2540 DRDKATTAPH---SSRDSTGDMPFKN-VLDFPWF-SNGSQNCTTQSKKILLRERKKKYIF 2376
            D ++  T+P       +  G++   N +LDF WF +  S++     ++ + RE+KK YIF
Sbjct: 162  DEEECATSPEVPVEDSEDDGEVATSNKILDFEWFQTQPSRDPLMHWRREVAREKKKHYIF 221

Query: 2375 KNVESRRFIELMKKCADKLGTESTLQFFEKLGRETGVKEYNTLIKLCIDKARGCRKEEDS 2196
            KNVESRR+ +LM+ CA++LGTEST++FF KLGRETGVKE+N++IKLC++KA+ CR  + +
Sbjct: 222  KNVESRRYTKLMRMCANRLGTESTIEFFGKLGRETGVKEFNSMIKLCLEKAKACRDIDSA 281

Query: 2195 LVYINKVHGLFLSMIEKGMPIEEESYGPLLNYMIDKKILLGFQMFIELFKNEIPDC-SRI 2019
            + YI + + LF +M +KG+ IE++ YGP L Y+ID  +   F+MF   FK   P C SRI
Sbjct: 282  VEYIYRAYRLFETMKDKGLTIEKDIYGPFLLYLIDVGMFEEFEMFSAFFKELNPKCFSRI 341

Query: 2018 GYYEMVFWIMVGNEEKIEELLDLVKVGSFEDKYPFIESYLLAFCRSGSDRKKDLLQLLEI 1839
             YYEM+  I + +EEKI+EL   V+  + +  Y   ESY+LAF  SG  RK+DL+ LL++
Sbjct: 342  AYYEMLLCIRIQDEEKIQELCHSVEDYNEKAHYDLAESYMLAFAESG--RKEDLVALLDM 399

Query: 1838 VDMGRISSPKCIECVFRSLGTLQLEDLAEKYFFELNTAGLWKEDISSFICKYVTSLPNLV 1659
            +D+ ++S  K I  +F+SLG L+LE+ AEK    + + G    +ISS I  Y T++ N++
Sbjct: 400  LDLSKVSGSKYIYNIFKSLGRLELENYAEKLLQGMRSKGCADHNISSLILDYTTNITNIM 459

Query: 1658 VEDVISKFINTHQKLGIAASIASYEKLISLCCSSNKVCVSLDIVDHMYKSGLCVPIEVLS 1479
            VED++  F   H+K  +A SIA+Y+K+IS+CC+S+K+ ++LD+ D M KS   VP+E   
Sbjct: 460  VEDMLVAFHKWHEKFEVAPSIAAYDKIISICCNSSKIGLALDVADRMCKSSSDVPVESFH 519

Query: 1478 PILHACEQSGQLEMVHPIFLVMRQHNLQPTEDTLKRIIHLYMKMKDFEGAYNVIIDAQEM 1299
            PI+HACEQ  +L M  PI+ ++R HNL+   +T + +I L++K+KDFEGAYN++ DA+E 
Sbjct: 520  PIIHACEQRCELHMARPIYDLIRHHNLKLKSETFRSMISLFVKLKDFEGAYNILTDAEEF 579

Query: 1298 NVMPTTAMYNAIMAGYFREKNNHRALMVLKQIEHANLKPDSETYSYLIANCECEEDIVK- 1122
              + T ++YNAIM GY+REKN + A MV+ Q++ A +KPDSET+SYLIANCE EE+I K 
Sbjct: 580  GEISTVSLYNAIMLGYYREKNYNGAQMVMSQMQIAGVKPDSETFSYLIANCESEENISKV 639

Query: 1121 ------------------------------------YREQMCCSEVGFTKYIYMSLVNAY 1050
                                                YR+Q+    +  T++IY++L  AY
Sbjct: 640  SLSAATTQTTVLPRIPCRLQPPPGHTASGPSIEFWTYRDQLRQDLIPMTRHIYVALTVAY 699

Query: 1049 AKFGNFEMAKQIILNKEIPVNYLNEINGVLMSALASNGQIHDALGIYAEIKQSRANIEPK 870
            A+ GNF+MAKQ++L+KEIP  +L++I   L+ ALASNGQ+ DAL ++  IK+S  ++EPK
Sbjct: 700  ARLGNFDMAKQVLLDKEIPRKFLSDIKSALVGALASNGQVLDALRLHDVIKESGGSLEPK 759

Query: 869  AVISLLEHLQTXXXXXXXXXXXXXLKDSNSWFDGCSRVILYCIQYNLTGSAXXXXXXXXX 690
            A I+L+EH++T             L DS+SWF+G +  +L  ++                
Sbjct: 760  AAITLIEHIRTEGELDRMHQLLDGLNDSDSWFEGVAIDLLKQLK---------------E 804

Query: 689  KDVSSANLIIGQMFSQIFKTP-TNLKSGFELLQGVKELGLHPSRTCLDFLLSTCVKAENS 513
            KD  S  +++ Q+F QI+    TNL  G   L  VKELGL+ SRT LDFLLS CVKA+N 
Sbjct: 805  KDEMSTYMVVDQVFCQIWDMEITNLDLGMVFLDAVKELGLNVSRTSLDFLLSACVKAKNL 864

Query: 512  QMAWRVWSEYETSGLAYNSLTFIRM 438
            Q A ++WSEYE++GL +N LT +R+
Sbjct: 865  QRAQQIWSEYESAGLPHNVLTSLRL 889


>ref|XP_004244155.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
            mitochondrial-like [Solanum lycopersicum]
          Length = 850

 Score =  593 bits (1530), Expect = e-167
 Identities = 321/748 (42%), Positives = 478/748 (63%), Gaps = 6/748 (0%)
 Frame = -2

Query: 2549 LCGDRDKATTAPHSSRDSTGDMPFKNVLDFPWFSNGSQNCTTQSKKILLRERKKKYIFKN 2370
            LCGD D   + P  S +++     +NVLD PW SN  +   +  +K + RERK+K+ FK+
Sbjct: 86   LCGDLDSYLSDPEESSNASC---LENVLDVPWLSNVEKCSISLRRKEIARERKEKWTFKS 142

Query: 2369 VESRRFIELMKKCADKLGTESTLQFFEKLGRETGVKEYNTLIKLCIDKARGCRKEEDSLV 2190
             +  RF +L+++CA KLGT++T++ F KLGRETG+KEYN LI+LCI+KAR    EE SL 
Sbjct: 143  SQVGRFHQLVEQCACKLGTDTTIKVFGKLGRETGLKEYNALIRLCIEKARESNDEEVSLK 202

Query: 2189 YINKVHGLFLSMIEKGMPIEEESYGPLLNYMIDKKILLGFQMFIELFKNEIPDCS-RIGY 2013
             ++K + L  SM E+G  ++EESYG +L Y ID  ++  F  + EL  +   D   R+ Y
Sbjct: 203  QLSKAYQLLKSMKEQGFQLKEESYGSILMYFIDFGMVQDFDFYCELITDGNADSLVRLTY 262

Query: 2012 YEMVFWIMVGNEEKIEELLDLVKVGSFEDKYPFIESYLLAFCRSGSDRKKDLLQLLEIVD 1833
            YEM+ W  V NE+KIEELL  + +    DK  F E+YLLA C S  DR +D +++L  +D
Sbjct: 263  YEMLLWAKVENEDKIEELLYHLSLYDGADKSAFQENYLLALCES--DRVEDFVRVLRTID 320

Query: 1832 MGRISSPKCIECVFRSLGTLQLEDLAEKYFFELNTAGLWKEDISSFICKYVTSLPNLVVE 1653
            + ++SS   +  +F+ LG L LE  A+ +  EL T G+  +DIS FIC Y  S+P+  VE
Sbjct: 321  ITKVSSIDFVANIFKFLGKLLLESFAKIFLQELVTTGIGAKDISKFICNYTISMPS-AVE 379

Query: 1652 DVISKFINTHQKLGIAASIASYEKLISLCCSSNKVCVSLDIVDHMYKSGLCVPIEVLSPI 1473
            DVI +F N H +L +  + + YEKLI  CC   KV  +LD+VD M+++GL + +E  + I
Sbjct: 380  DVILEFKNLHAELELRPTFSQYEKLIRYCCELFKVHAALDMVDQMFEAGLTLSLETFNSI 439

Query: 1472 LHACEQSGQLEMVHPIFLVMRQHNLQPTEDTLKRIIHLYMKMKDFEGAYNVIIDAQEMNV 1293
            L AC++S +  +VH ++ ++ +H+++P  +T + +I++ +++KDFEGAY+++ D ++ N+
Sbjct: 440  LEACDKSREYNLVHRMYPMILRHDIKPNSETFRIMINMTVRIKDFEGAYDMLKDLEKFNL 499

Query: 1292 MPTTAMYNAIMAGYFREKNNHRALMVLKQIEHANLKPDSETYSYLIANCECEEDIVKYRE 1113
            MPTT MYNAIM GYFREK+   AL VLK++E AN+K DS+T+SYLI+NC  E+DI K+ +
Sbjct: 500  MPTTNMYNAIMGGYFREKDTRAALGVLKRMEDANVKSDSQTFSYLISNCTNEDDISKFLD 559

Query: 1112 QMCCSEVGFTKYIYMSLVNAYAKFGNFEMAKQIILNKEIPVNYLNEINGVLMSALASNGQ 933
            +M  S V  TK++YM+L+N YA  G FE AKQ+I ++ +     NEI  VL+SALAS+G+
Sbjct: 560  EMKDSGVQLTKHVYMALINGYAASGQFEKAKQVICDQGVSAKGFNEIRSVLISALASHGK 619

Query: 932  IHDALGIYAEIKQSRANIEPKAVISLLEHLQTXXXXXXXXXXXXXLKDSNSWFDGCSRVI 753
            I DAL IY E+++++  +EPKAV  L+E+LQ              L   + W D   RVI
Sbjct: 620  ISDALDIYKEMEEAQCKLEPKAVTCLIENLQAEGDLHRLLNLLEQLNGLDQWVDASYRVI 679

Query: 752  LYCIQYNLTGS---AXXXXXXXXXKDVSSANLIIGQMFSQIF-KTPTNLKSGFELLQGV- 588
             YCI+ N   S              D  +  ++  ++F QI  + P NL+ G +LLQ + 
Sbjct: 680  TYCIRKNHFRSIVDLLKRLVDVYKSDEVAKEVLFDEVFYQIAEQDPINLQLGLDLLQAIK 739

Query: 587  KELGLHPSRTCLDFLLSTCVKAENSQMAWRVWSEYETSGLAYNSLTFIRMYQALLASKEF 408
            K++GL PSR  LDFLLS CV A++ Q  + +W EY  +GL YN L+++RMY+ALLA  ++
Sbjct: 740  KDIGLLPSRQSLDFLLSACVNAKDLQACYLIWKEYRIAGLPYNILSYVRMYRALLALGDY 799

Query: 407  AAAKELLKRIPIEDRHVQYLINACETRY 324
             +A  +L  IP +D HV  ++ AC+T Y
Sbjct: 800  KSAANILNNIPRDDFHVCNVVKACQTAY 827


>gb|EOY12569.1| Tetratricopeptide repeat-like superfamily protein, putative isoform 1
            [Theobroma cacao]
          Length = 815

 Score =  593 bits (1529), Expect = e-166
 Identities = 331/775 (42%), Positives = 472/775 (60%), Gaps = 6/775 (0%)
 Frame = -2

Query: 2630 SSSTNTNEVVAPGKEXXXXXXXXXXXILCGDRDKATTAPHSSRDSTGDMPFKNVLDFPWF 2451
            SSS++++ + A  K             L      +  +P + +  T    F  + D    
Sbjct: 26   SSSSSSSSLDARDKSLKEFVSSLDTSSLSSPASFSKRSPIAIKKPTDGSLFNLLRDSASL 85

Query: 2450 SNGSQNCTTQSKKILLRERKKKYIFKNVESRRFIELMKKCADKLGTESTLQFFEKLGRET 2271
            S  S N  T  K++  RERK+K++FK  +  RF  L+K C DKLGT++T++ F+KLGRET
Sbjct: 86   SEDSMNELTHEKEVS-RERKQKWVFKTSQVIRFNRLIKMCGDKLGTKATMEVFDKLGRET 144

Query: 2270 GVKEYNTLIKLCIDKARGCRKEEDSLVYINKVHGLFLSMIEKGMPIEEESYGPLLNYMID 2091
            G+KEYN LI+LC++ AR    E+ +L +I++    F  M E+G  +EEE+ GP L Y ID
Sbjct: 145  GLKEYNALIELCLENARTSDDEDVALEHISEAFRTFKKMRERGFQVEEETIGPFLMYFID 204

Query: 2090 KKILLGFQMFIELFKNEIPDC-SRIGYYEMVFWIMVGNEEKIEELLDLVKVGSFEDKYPF 1914
            + ++  F  F    K+  P    R+GYYEM+ WI V NE+KI+EL + +      D +  
Sbjct: 205  RGMVEEFFFFCGPIKDGNPSLLPRLGYYEMLLWIGVNNEKKIQELCNYIAATDGIDDFEL 264

Query: 1913 IESYLLAFCRSGSDRKKDLLQLLEIVDMGRISSPKCIECVFRSLGTLQLEDLAEKYFFEL 1734
             E+YLLA C SG  RK+DL+QLLEI+D+ RISS   +  +F+SLG L LE  AEK+    
Sbjct: 265  KENYLLALCESG--RKEDLMQLLEIIDIKRISSVNKVANIFKSLGRLSLESFAEKFLLAF 322

Query: 1733 NTAGLWKEDISSFICKYVTSLPNLVVEDVISKFINTHQKLGIAASIASYEKLISLCCSSN 1554
             +     E+IS  I  Y +S+PNL VED   KF + H+K  I  S ASYE LI+ CC  +
Sbjct: 323  KSCDYGMENISRLILSYASSIPNLKVEDTFLKFKSFHKKFKIIPSSASYEMLITYCCDFH 382

Query: 1553 KVCVSLDIVDHMYKSGLCVPIEVLSPILHACEQSGQLEMVHPIFLVMRQHNLQPTEDTLK 1374
            KV V+LD+V+ M + GL +PIE L  IL+A E+S +  +V  I+ V+  HNL+P  +T +
Sbjct: 383  KVHVALDLVNEMCELGLSLPIETLHRILYASEESYEFHLVRQIYSVICLHNLKPNSETFR 442

Query: 1373 RIIHLYMKMKDFEGAYNVIIDAQEMNVMPTTAMYNAIMAGYFREKNNHRALMVLKQIEHA 1194
             +I L +KMKDFEGAY ++ D ++M VMPT ++YNAIMAGYFREKN+  AL VLK++E  
Sbjct: 443  SMISLSVKMKDFEGAYAMLNDMKKMKVMPTASIYNAIMAGYFREKNSSAALKVLKKMECE 502

Query: 1193 NLKPDSETYSYLIANCECEEDIVKYREQMCCSEVGFTKYIYMSLVNAYAKFGNFEMAKQI 1014
            ++KPD++T+SYLI NC+CEEDI KY E+M  + +  TK+++M+L+NAYA  G FE AKQ+
Sbjct: 503  DIKPDAQTFSYLIGNCDCEEDISKYYEEMKSAGIQVTKHVFMALINAYATCGQFEKAKQV 562

Query: 1013 ILNKEIPVNYLNEINGVLMSALASNGQIHDALGIYAEIKQSRANIEPKAVISLLEHLQTX 834
            +L+K IP   L EI   L+SALASNGQ+ DAL IY EIKQ    +EPKAVISL+EH    
Sbjct: 563  LLDKGIPFKSLKEIKSALVSALASNGQMCDALNIYKEIKQVGDTLEPKAVISLIEHFNLE 622

Query: 833  XXXXXXXXXXXXLKDSNSWFDGCSRVILYCIQ---YNLTGSAXXXXXXXXXKDVSSANLI 663
                        L D + W D C R++L+C++      T             D    + +
Sbjct: 623  GELSTLLQLLEELHDPDYWVDACCRIVLHCVKIKDLRSTVDLLKRLKDKLHNDDLGIDFL 682

Query: 662  IGQMFSQIFK-TPTNLKSGFELLQGVK-ELGLHPSRTCLDFLLSTCVKAENSQMAWRVWS 489
              ++FS I +     L  G  LLQ +K E+G+ PSR  LDFLL  C  A++ Q +  +W 
Sbjct: 683  CDEVFSLIAEGDAKELWFGLALLQAIKDEIGVIPSRKSLDFLLMACTNAKDLQNSLFIWK 742

Query: 488  EYETSGLAYNSLTFIRMYQALLASKEFAAAKELLKRIPIEDRHVQYLINACETRY 324
            EY+ +GL+YN L+++ MYQALLA  +  +A  +  +IP +D H++ +I A +T Y
Sbjct: 743  EYQLAGLSYNILSYLGMYQALLACGDLKSANIMRTKIPTDDPHIRLIIKAYQTTY 797


>ref|XP_006370619.1| hypothetical protein POPTR_0001s44310g [Populus trichocarpa]
            gi|550349825|gb|ERP67188.1| hypothetical protein
            POPTR_0001s44310g [Populus trichocarpa]
          Length = 726

 Score =  588 bits (1516), Expect = e-165
 Identities = 317/704 (45%), Positives = 458/704 (65%), Gaps = 6/704 (0%)
 Frame = -2

Query: 2417 KKILLRERKKKYIFKNVESRRFIELMKKCADKLGTESTLQFFEKLGRETGVKEYNTLIKL 2238
            +K + RERK+K++F   +      ++  CADKLGT++ ++ F KLGRETG+KE+N L+K 
Sbjct: 3    RKDVSRERKQKWVFTYSQVNHINRIVDTCADKLGTDNAMEVFGKLGRETGLKEFNALMKK 62

Query: 2237 CIDKARGCRKEEDSLVYINKVHGLFLSMIEKGMPIEEESYGPLLNYMIDKKILLGFQMFI 2058
             I++ R    E  ++ +I+ V  LF SM E+G  IEEE+YGP L  +IDK ++  F  F 
Sbjct: 63   YIEQCRETDDESVAMKHISAVLQLFKSMKEQGFSIEEETYGPFLILLIDKGMVEEFHFFS 122

Query: 2057 ELFKNEIPDCS-RIGYYEMVFWIMVGNEEKIEELLDLVKVGSFEDKYPFIESYLLAFCRS 1881
            ++ K+  P  + R+GYY+M+ +I V +EEKI+EL + + +   ++     E+YLLA C S
Sbjct: 123  DIIKDTNPSKNARLGYYDMLLYIGVNDEEKIQELCNYICIDDGDNNISLRENYLLALCES 182

Query: 1880 GSDRKKDLLQLLEIVDMGRISSPKCIECVFRSLGTLQLEDLAEKYFFELNTAGLWKEDIS 1701
              D+K  LLQLLE +D+ + SS   +  +F+SLG L LE  A+K+   L +     EDIS
Sbjct: 183  --DQKNYLLQLLETMDITKFSSLDHLASIFKSLGRLSLESFAKKFLLVLKSCDYGAEDIS 240

Query: 1700 SFICKYVTSLPNLVVEDVISKFINTHQKLGIAASIASYEKLISLCCSSNKVCVSLDIVDH 1521
            + I  Y TS+PNLVVEDV+SKF   H  + ++ S  SYEKL+   C+  KV ++LDIVD 
Sbjct: 241  TLIFSYATSIPNLVVEDVVSKFKTLHMIMKMSPSSTSYEKLVVYNCNLLKVHLALDIVDQ 300

Query: 1520 MYKSGLCVPIEVLSPILHACEQSGQLEMVHPIFLVMRQHNLQPTEDTLKRIIHLYMKMKD 1341
            M K GL + I  +  IL+A E+S    +V  I+ ++   +L P  +T + +I L +KMKD
Sbjct: 301  MCKEGLTISINTIHSILNASEESFDFNLVRRIYSLIYHLDLTPNNETFRSMISLSVKMKD 360

Query: 1340 FEGAYNVIIDAQEMNVMPTTAMYNAIMAGYFREKNNHRALMVLKQIEHANLKPDSETYSY 1161
            FEGAY ++ D +++N+ PT +MYNAIM GYFREKN   ALMVLKQ++ A++KPDS +YSY
Sbjct: 361  FEGAYGLLDDLKKLNLAPTASMYNAIMGGYFREKNIRGALMVLKQMKLADVKPDSSSYSY 420

Query: 1160 LIANCECEEDIVKYREQMCCSEVGFTKYIYMSLVNAYAKFGNFEMAKQIILNKEIPVNYL 981
            LI+NC  EE+I+KY E+M  + +  +K I+M+L+NAYA  G FE AKQ++L+KE P+ +L
Sbjct: 421  LISNCNNEEEIIKYYEEMKVAGIQVSKQIFMALINAYATCGQFEKAKQVLLDKEFPIKHL 480

Query: 980  NEINGVLMSALASNGQIHDALGIYAEIKQSRANIEPKAVISLLEHLQTXXXXXXXXXXXX 801
            NEI  VL+SALAS+GQ+ DAL +Y E+KQ+ +N+EPKAVISL+EH+ +            
Sbjct: 481  NEIRSVLVSALASHGQMTDALNLYEEMKQAGSNLEPKAVISLIEHVDSEGEQSRLLKLLE 540

Query: 800  XLKDSNSWFDGCSRVILYCIQYNLTGSA---XXXXXXXXXKDVSSANLIIGQMFSQIFKT 630
             L D N W DGC RVILYCI+     SA             D  +  ++  ++FSQ+ +T
Sbjct: 541  ELDDHNYWVDGCFRVILYCIRNKDLRSAVDLLKQLKDRFSDDELAMEVLFDEVFSQVAET 600

Query: 629  -PTNLKSGFELLQGVK-ELGLHPSRTCLDFLLSTCVKAENSQMAWRVWSEYETSGLAYNS 456
             P N++ G +LLQ +K ELG  PSR CLDFLL+ CV A++   +  VW EY+ +GL YN 
Sbjct: 601  EPANVRIGMDLLQAIKDELGASPSRKCLDFLLTACVNAKDLGNSLLVWKEYQAAGLPYNV 660

Query: 455  LTFIRMYQALLASKEFAAAKELLKRIPIEDRHVQYLINACETRY 324
             +++RMYQALLAS    +AK +L +IP +D HV+ +I  C+  Y
Sbjct: 661  TSYLRMYQALLASGGHVSAKVMLNKIPKDDPHVRIVIQECQRTY 704


>ref|XP_004307303.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
            mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 801

 Score =  575 bits (1483), Expect = e-161
 Identities = 317/725 (43%), Positives = 453/725 (62%), Gaps = 5/725 (0%)
 Frame = -2

Query: 2483 PFKNVLDFP-WFSNGSQNCT-TQSKKILLRERKKKYIFKNVESRRFIELMKKCADKLGTE 2310
            P +  LD   W S+ S     + ++K + RER+ ++   + +     +L+  CA +LGTE
Sbjct: 64   PLEKDLDLSSWISDLSHPANYSLTRKEVSRERRSRFCLGDKQVTGVDKLLDLCASRLGTE 123

Query: 2309 STLQFFEKLGRETGVKEYNTLIKLCIDKARGCRKEEDSLVYINKVHGLFLSMIEKGMPIE 2130
            + L  F KL +ETGVKE N LIK CI+ AR   +E  +  ++     +F SM E+G+P+E
Sbjct: 124  AALHVFSKLKKETGVKECNALIKKCIEGARIATEEVAAEKHMQLAFKIFKSMKEQGLPLE 183

Query: 2129 EESYGPLLNYMIDKKILLGFQMFIELFKNEIPDC-SRIGYYEMVFWIMVGNEEKIEELLD 1953
            EE+YGP L Y+ID  +   F     + KN  P   +R+GYYEM  W+ V +EEKI+EL D
Sbjct: 184  EETYGPFLEYLIDMGMTKEFCFLCGVIKNGNPSSLTRLGYYEMSLWVRVNHEEKIQELCD 243

Query: 1952 LVKVGSFEDKYPFIESYLLAFCRSGSDRKKDLLQLLEIVDMGRISSPKCIECVFRSLGTL 1773
             ++     +K    E+YL   C S  DR K++L+LLE +D+ ++SSP  +  +F+ LG L
Sbjct: 244  DIESFDGVNKSLLQENYLSVLCES--DRTKEILRLLESMDITKLSSPNFVARIFKCLGRL 301

Query: 1772 QLEDLAEKYFFELNTAGLWKEDISSFICKYVTSLPNLVVEDVISKFINTHQKLGIAASIA 1593
             LE  AEK   E       + + S+ I  YV  +PNL VED+ISKF N H KL +  S A
Sbjct: 302  LLESFAEKLLLEFKACDCAEGNTSNLIYSYVDGIPNLAVEDIISKFRNLHTKLEVTPSSA 361

Query: 1592 SYEKLISLCCSSNKVCVSLDIVDHMYKSGLCVPIEVLSPILHACEQSGQLEMVHPIFLVM 1413
            SYEKLI  CC S +V  +L++VD M++ GL   +E L  +L A  ++    +VH I+ V+
Sbjct: 362  SYEKLIIYCCDSLQVHAALELVDEMFELGLTFSLEALHSVLQASSENCDFNLVHQIYSVI 421

Query: 1412 RQHNLQPTEDTLKRIIHLYMKMKDFEGAYNVIIDAQEMNVMPTTAMYNAIMAGYFREKNN 1233
            ++ NL+P  +T + +I+L +KMKD+EGAY+++ D ++M V PT AMYNAIM GYFREKN 
Sbjct: 422  KRGNLKPNGETFRSMINLCVKMKDYEGAYSMLRDLEKMRVTPTAAMYNAIMVGYFREKNM 481

Query: 1232 HRALMVLKQIEHANLKPDSETYSYLIANCECEEDIVKYREQMCCSEVGFTKYIYMSLVNA 1053
               L VLK+++ ANL+PDS+T+S+LI NC  EEDI  Y E+M  S +  TK ++M+L+NA
Sbjct: 482  SCGLKVLKEMKEANLQPDSQTFSHLITNCNSEEDINMYYEEMKRSRIHATKQVFMALINA 541

Query: 1052 YAKFGNFEMAKQIILNKEIPVNYLNEINGVLMSALASNGQIHDALGIYAEIKQSRANIEP 873
            YA  G F+ AKQ++L+K IP    NEI  VL+ ALAS+GQ+ +A  IY ++K++  ++EP
Sbjct: 542  YAACGQFDKAKQVLLDKGIPQKSFNEIRSVLVQALASHGQLSNAFNIYEQVKEAGCSLEP 601

Query: 872  KAVISLLEHLQT-XXXXXXXXXXXXXLKDSNSWFDGCSRVILYCIQYNLTGSAXXXXXXX 696
            KAVISL+EHLQ+              LKD N W DGC R ILYC++Y             
Sbjct: 602  KAVISLIEHLQSDEVALSRLLPLLETLKDPNYWLDGCLRTILYCVRYK-------HLRDQ 654

Query: 695  XXKDVSSANLIIGQMFSQIFKTPTNLKSGFELLQGVK-ELGLHPSRTCLDFLLSTCVKAE 519
               D  +  +I  ++FS I ++ ++L+ G +LL  +K ELGL PSR CLDFLL  CV A+
Sbjct: 655  VCTDELALEVIFDKVFSFIAESESSLQFGLDLLHAMKSELGLTPSRKCLDFLLHACVSAK 714

Query: 518  NSQMAWRVWSEYETSGLAYNSLTFIRMYQALLASKEFAAAKELLKRIPIEDRHVQYLINA 339
            + Q +  VW EY+ +GL YN+L+F+RMYQALLAS +  AAK L  +IP +D HVQ +I A
Sbjct: 715  DLQSSIFVWQEYQATGLPYNTLSFLRMYQALLASGDRKAAKVLEHKIPKDDPHVQSIIEA 774

Query: 338  CETRY 324
            C+  Y
Sbjct: 775  CKQTY 779