BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00026198
         (938 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABZ10949.1| fusion protein [Southern tomato virus]                  52   5e-15
ref|YP_002321509.1| fusion protein p122 [Southern tomato virus] ...    52   5e-15
ref|YP_002321510.1| putative coat protein p42 [Southern tomato v...    60   2e-06
dbj|BAJ90085.1| predicted protein [Hordeum vulgare subsp. vulgare]     59   2e-06

>gb|ABZ10949.1| fusion protein [Southern tomato virus]
          Length = 1062

 Score = 52.0 bits (123), Expect(3) = 5e-15
 Identities = 32/118 (27%), Positives = 55/118 (46%)
 Frame = +1

Query: 4   EVVIADLESRLRAAKANMENELTAVRQKYIPCGEYVPLEIYEFNQQCWTEYLNTCLVNNX 183
           E  IADL+ ++   +  +E +L A +  Y P   YV L  YE N +CW+ Y         
Sbjct: 167 EEEIADLQRKIVKRREKLEEDLIATKSNYEPVSRYVGLSDYELNCKCWSLYQQFNPDKVT 226

Query: 184 XXXXXXXXXXXXXXXTFGEAVRQRHLLDFIMQGERRDQLLEYLNTKIKIGHFENVGEE 357
                           + E V + + L+F+  G  +D+L  ++N KI +G +E +G++
Sbjct: 227 AGAKPTRKQVKEAFDMYAEFVAKTNRLEFLKHGNVKDELQAFINAKI-LG-YEQLGDK 282



 Score = 48.5 bits (114), Expect(3) = 5e-15
 Identities = 44/148 (29%), Positives = 68/148 (45%), Gaps = 16/148 (10%)
 Frame = +2

Query: 347 LGKSAQPSVYESS*RQQALSDLLRQHTREYRLQLAGRIPVGQILRPMQPGFSTPASLIL- 523
           LG   +  +   S +Q  L  +++ + R  R +L   +PVG++ R  +     P S I+ 
Sbjct: 279 LGDKGRVVILGVSWQQWVLRWIMKWNQRT-RKRLLKNLPVGKLRRGKEMTPCRPLSEIIP 337

Query: 524 ------ENTLLSQPKPTIQRSLEL*MFNNDLLTSHPYMNVLVRPSDVVSRAIPLARS--- 676
                 + TL  +  P + R+ E+      LL  +  + V VRP    +RAIP +RS   
Sbjct: 338 MERLEEKRTLQYKLPPQLSRATEVEAEAVSLLYPNARIEVEVRPIGRDTRAIPFSRSRWE 397

Query: 677 ------IGDGEMRDWAIDSTKYREDVCF 742
                 IG GE+ +W ID  KYR   CF
Sbjct: 398 VGVRKVIGGGEVLNWDIDGNKYRGGGCF 425



 Score = 27.3 bits (59), Expect(3) = 5e-15
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +1

Query: 736 LLCDASLELQERFLRGRFSLAAAREVLQLPSELPV 840
           LL  A+    +R L   +++  ARE L LPS+L V
Sbjct: 431 LLAGATQRPPQRLLEDCYTITTAREALGLPSDLAV 465


>ref|YP_002321509.1| fusion protein p122 [Southern tomato virus]
           gi|133711705|gb|ABO36238.1| fusion protein p122
           [Southern tomato virus]
          Length = 1062

 Score = 52.0 bits (123), Expect(3) = 5e-15
 Identities = 32/118 (27%), Positives = 55/118 (46%)
 Frame = +1

Query: 4   EVVIADLESRLRAAKANMENELTAVRQKYIPCGEYVPLEIYEFNQQCWTEYLNTCLVNNX 183
           E  IADL+ ++   +  +E +L A +  Y P   YV L  YE N +CW+ Y         
Sbjct: 167 EEEIADLQRKIVKRREKLEEDLIATKSNYEPVSRYVGLSDYELNCKCWSLYQQFNPDKVT 226

Query: 184 XXXXXXXXXXXXXXXTFGEAVRQRHLLDFIMQGERRDQLLEYLNTKIKIGHFENVGEE 357
                           + E V + + L+F+  G  +D+L  ++N KI +G +E +G++
Sbjct: 227 AGAKPTRKQVKEAFDMYAEFVAKTNRLEFLKHGNVKDELQAFINAKI-LG-YEQLGDK 282



 Score = 48.5 bits (114), Expect(3) = 5e-15
 Identities = 44/148 (29%), Positives = 68/148 (45%), Gaps = 16/148 (10%)
 Frame = +2

Query: 347 LGKSAQPSVYESS*RQQALSDLLRQHTREYRLQLAGRIPVGQILRPMQPGFSTPASLIL- 523
           LG   +  +   S +Q  L  +++ + R  R +L   +PVG++ R  +     P S I+ 
Sbjct: 279 LGDKGRVVILGVSWQQWVLRWIMKWNQRT-RKRLLKNLPVGKLRRGKEMTPCRPLSEIIP 337

Query: 524 ------ENTLLSQPKPTIQRSLEL*MFNNDLLTSHPYMNVLVRPSDVVSRAIPLARS--- 676
                 + TL  +  P + R+ E+      LL  +  + V VRP    +RAIP +RS   
Sbjct: 338 MERLEEKRTLQYKLPPQLSRATEVEAEAVSLLYPNARIEVEVRPIGRDTRAIPFSRSRWE 397

Query: 677 ------IGDGEMRDWAIDSTKYREDVCF 742
                 IG GE+ +W ID  KYR   CF
Sbjct: 398 VGVRKVIGGGEVLNWDIDGNKYRGGGCF 425



 Score = 27.3 bits (59), Expect(3) = 5e-15
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +1

Query: 736 LLCDASLELQERFLRGRFSLAAAREVLQLPSELPV 840
           LL  A+    +R L   +++  ARE L LPS+L V
Sbjct: 431 LLAGATQRPPQRLLEDCYTITTAREALGLPSDLAV 465


>ref|YP_002321510.1| putative coat protein p42 [Southern tomato virus]
           gi|133711704|gb|ABO36237.1| putative coat protein p42
           [Southern tomato virus] gi|167077479|gb|ABZ10948.1|
           putative coat protein [Southern tomato virus]
          Length = 377

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 45/168 (26%), Positives = 72/168 (42%), Gaps = 5/168 (2%)
 Frame = +1

Query: 4   EVVIADLESRLRAAKANMENELTAVRQKYIPCGEYVPLEIYEFNQQCWTEYLNTCLVNNX 183
           E  IADL+ ++   +  +E +L A +  Y P   YV L  YE N +CW+ Y         
Sbjct: 167 EEEIADLQRKIVKRREKLEEDLIATKSNYEPVSRYVGLSDYELNCKCWSLYQQFNPDKVT 226

Query: 184 XXXXXXXXXXXXXXXTFGEAVRQRHLLDFIMQGERRDQLLEYLNTKIKIGHFENVGEERA 363
                           + E V + + L+F+  G  +D+L  ++N KI +G +E +G++  
Sbjct: 227 AGAKPTRKQVKEAFDMYAEFVAKTNRLEFLKHGNVKDELQAFINAKI-LG-YEQLGDKGK 284

Query: 364 AKRLRILLTPAGLERPTQTTHSRVPVAA-----GRANPGGTDPQANAT 492
           ++ LR  L   G+E   +        AA     G A  G  D    AT
Sbjct: 285 SRYLRRQLAAMGVEMDHEVESEDEEEAAEEPAGGEAEEGEGDDPLQAT 332


>dbj|BAJ90085.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 727

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 40/161 (24%), Positives = 65/161 (40%)
 Frame = +1

Query: 13  IADLESRLRAAKANMENELTAVRQKYIPCGEYVPLEIYEFNQQCWTEYLNTCLVNNXXXX 192
           IA    ++  A+ + E  + A ++ Y     YV L+  E   QCWT YL  C        
Sbjct: 530 IAHYMVKIDEARKSFEVSIEAAKEHYPVSASYVALDSNELRGQCWTMYLAQC----RKEA 585

Query: 193 XXXXXXXXXXXXTFGEAVRQRHLLDFIMQGERRDQLLEYLNTKIKIGHFENVGEERAAKR 372
                        +G  + QRHL +F  Q   R+ LL+Y  T  K+ + +  G+ R    
Sbjct: 586 KDLNAKASDIVEKYGPEIIQRHLFEFCSQETNREALLKYAQT--KVNNLKEAGDARGENT 643

Query: 373 LRILLTPAGLERPTQTTHSRVPVAAGRANPGGTDPQANATR 495
           L   +T   +E+      +   +A G    GG++     +R
Sbjct: 644 LHDYMTLLDIEKAYALLAAEEQIANGPVTCGGSEDADRGSR 684