BLASTX nr result

ID: Zingiber25_contig00026068 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00026068
         (438 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEK20778.1| cyclin dependent kinase regulator [Musa acuminata...    68   1e-09
ref|XP_003634482.1| PREDICTED: LOW QUALITY PROTEIN: cyclin-D4-2-...    60   4e-07
emb|CBI19236.3| unnamed protein product [Vitis vinifera]               60   4e-07
emb|CAN80526.1| hypothetical protein VITISV_030539 [Vitis vinifera]    60   4e-07
gb|AAV28532.1| D-type cyclin [Saccharum hybrid cultivar ROC16]         59   5e-07
ref|XP_006659503.1| PREDICTED: cyclin-D4-2-like [Oryza brachyantha]    58   1e-06
ref|XP_002460365.1| hypothetical protein SORBIDRAFT_02g027020 [S...    58   1e-06
ref|XP_003574644.1| PREDICTED: cyclin-D4-2-like [Brachypodium di...    57   2e-06
ref|XP_003578259.1| PREDICTED: cyclin-D4-1-like [Brachypodium di...    56   4e-06
ref|XP_002444532.1| hypothetical protein SORBIDRAFT_07g023350 [S...    56   4e-06
ref|NP_001152238.1| cyclin delta-2 [Zea mays] gi|195654177|gb|AC...    55   1e-05

>gb|AEK20778.1| cyclin dependent kinase regulator [Musa acuminata AAA Group]
          Length = 344

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 38/83 (45%), Positives = 50/83 (60%)
 Frame = -2

Query: 251 MAPSYDYASSVLLCVEDNSCILXXXXXXXGAEEDNQIICLSEAQRCRFNGDPFIILPPQS 72
           M+PS D ASS+LLC EDN  IL         E  ++   +SE +RC F GD     P QS
Sbjct: 1   MSPSCDCASSILLCAEDNDSILGFDDGEE--EGGHRPGWVSEPKRCDFYGDILAGFPLQS 58

Query: 71  DDYLGVLIQRESEYMPREDYGVR 3
           D+ L +L++RE E++PREDY  R
Sbjct: 59  DELLSLLVEREQEHLPREDYRER 81


>ref|XP_003634482.1| PREDICTED: LOW QUALITY PROTEIN: cyclin-D4-2-like [Vitis vinifera]
          Length = 325

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 38/88 (43%), Positives = 51/88 (57%), Gaps = 5/88 (5%)
 Frame = -2

Query: 251 MAPSYDYASSVLLCVEDNSCILXXXXXXXGAEED----NQIICLSEAQRCRFNGDPFII- 87
           MAPS+D A+S LLC EDNS I         AEE     +     S  Q   FNG  F+I 
Sbjct: 1   MAPSFDCAASSLLCGEDNSSIFDDADYGAAAEEFETAWHHQNHRSRNQEKSFNGGEFLIG 60

Query: 86  LPPQSDDYLGVLIQRESEYMPREDYGVR 3
           LP QSD+ L ++I++ES+++P  DY +R
Sbjct: 61  LPVQSDECLALMIEKESQHLPAADYLMR 88


>emb|CBI19236.3| unnamed protein product [Vitis vinifera]
          Length = 355

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 38/88 (43%), Positives = 51/88 (57%), Gaps = 5/88 (5%)
 Frame = -2

Query: 251 MAPSYDYASSVLLCVEDNSCILXXXXXXXGAEED----NQIICLSEAQRCRFNGDPFII- 87
           MAPS+D A+S LLC EDNS I         AEE     +     S  Q   FNG  F+I 
Sbjct: 1   MAPSFDCAASSLLCGEDNSSIFDDADYGAAAEEFETAWHHQNHRSRNQEKSFNGGEFLIG 60

Query: 86  LPPQSDDYLGVLIQRESEYMPREDYGVR 3
           LP QSD+ L ++I++ES+++P  DY +R
Sbjct: 61  LPVQSDECLALMIEKESQHLPAADYLMR 88


>emb|CAN80526.1| hypothetical protein VITISV_030539 [Vitis vinifera]
          Length = 375

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 38/88 (43%), Positives = 51/88 (57%), Gaps = 5/88 (5%)
 Frame = -2

Query: 251 MAPSYDYASSVLLCVEDNSCILXXXXXXXGAEED----NQIICLSEAQRCRFNGDPFII- 87
           MAPS+D A+S LLC EDNS I         AEE     +     S  Q   FNG  F+I 
Sbjct: 1   MAPSFDCAASSLLCGEDNSSIFDDADYGAAAEEFETAWHHQNHRSRNQEKSFNGGEFLIG 60

Query: 86  LPPQSDDYLGVLIQRESEYMPREDYGVR 3
           LP QSD+ L ++I++ES+++P  DY +R
Sbjct: 61  LPVQSDECLALMIEKESQHLPAADYLMR 88


>gb|AAV28532.1| D-type cyclin [Saccharum hybrid cultivar ROC16]
          Length = 343

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 33/84 (39%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
 Frame = -2

Query: 251 MAPS-YDYASSVLLCVEDNSCILXXXXXXXGAEEDNQIICLSEAQRCRFNGDPFIILPPQ 75
           MAPS Y+ A+S+LLC ED+S IL        AE + + + L+ + R R  GDP ++ P  
Sbjct: 1   MAPSSYEMAASILLCAEDSSSILDLE-----AEAEEEEVMLARSSRTR--GDPSVVFPVP 53

Query: 74  SDDYLGVLIQRESEYMPREDYGVR 3
           S++ +   ++ E+ +MPREDY  R
Sbjct: 54  SEECVAGFVEAEAAHMPREDYAER 77


>ref|XP_006659503.1| PREDICTED: cyclin-D4-2-like [Oryza brachyantha]
          Length = 366

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 38/90 (42%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
 Frame = -2

Query: 251 MAPS---YDYASSVLLCVEDNSCILXXXXXXXGAEEDNQIICLSEAQRCR-FNGD---PF 93
           MAPS   YD A+S+LLC EDNS IL        AEE      +     CR  +GD     
Sbjct: 1   MAPSSCCYDVAASMLLCAEDNSSILCLEEEEEEAEEA-AAAAVGRKSGCRSLDGDFDGGV 59

Query: 92  IILPPQSDDYLGVLIQRESEYMPREDYGVR 3
            + PPQS++ +  L++RE  +MPR DYG R
Sbjct: 60  DLFPPQSEECVASLVERERAHMPRADYGER 89


>ref|XP_002460365.1| hypothetical protein SORBIDRAFT_02g027020 [Sorghum bicolor]
           gi|241923742|gb|EER96886.1| hypothetical protein
           SORBIDRAFT_02g027020 [Sorghum bicolor]
          Length = 378

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
 Frame = -2

Query: 251 MAP--SYDYASSVLLCVEDNSCILXXXXXXXGAEEDNQIICLSEAQRCRFNGDPFIILPP 78
           MAP  SY+ A+S+LLC ED+S IL        AE + + + L+   R R  G+P +  P 
Sbjct: 1   MAPMSSYEMAASILLCAEDSSSILDLE-----AEAEEEEVMLAPRSRTRTRGEPSVEFPV 55

Query: 77  QSDDYLGVLIQRESEYMPREDYGVR 3
            S++ +   ++ E+ +MPREDY  R
Sbjct: 56  PSEECVDGFVEAEAAHMPREDYAER 80


>ref|XP_003574644.1| PREDICTED: cyclin-D4-2-like [Brachypodium distachyon]
          Length = 353

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 38/84 (45%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
 Frame = -2

Query: 251 MAPS-YDYASSVLLCVEDNSCILXXXXXXXGAEEDNQIICLSEAQRCRFNGDPFIILPPQ 75
           MAPS YD A+S+LLC EDN  I+        AE + + I    A    F  D F   PPQ
Sbjct: 1   MAPSCYDVAASMLLCAEDNVSIMDFDE----AEVEEEPI----AAAADFGADLF---PPQ 49

Query: 74  SDDYLGVLIQRESEYMPREDYGVR 3
           S++ +  L++RESE+MPR DYG R
Sbjct: 50  SEECVAGLVERESEHMPRPDYGER 73


>ref|XP_003578259.1| PREDICTED: cyclin-D4-1-like [Brachypodium distachyon]
          Length = 346

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
 Frame = -2

Query: 251 MAPSYDYASSVLLCVEDNSCILXXXXXXXGAEEDNQIICLSEAQRCRFNGDPFII-LPPQ 75
           MAPSY+ A+S+LLC ED+S IL          E+ +   +  A    ++GD F   LP  
Sbjct: 1   MAPSYEMAASILLCAEDSSSILGFG-------EEEEAAAVKAASWSPYSGDVFAADLPLP 53

Query: 74  SDDYLGVLIQRESEYMPREDYGVR 3
           S++ +   ++ E+E+MPREDY  R
Sbjct: 54  SEECVARWVETEAEHMPREDYAQR 77


>ref|XP_002444532.1| hypothetical protein SORBIDRAFT_07g023350 [Sorghum bicolor]
           gi|241940882|gb|EES14027.1| hypothetical protein
           SORBIDRAFT_07g023350 [Sorghum bicolor]
          Length = 373

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 36/87 (41%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
 Frame = -2

Query: 251 MAPS-YDYASSVLLCVEDNSCILXXXXXXXGAEEDNQIICLSEAQRCRFN-GDPFII--L 84
           MAPS YD A+S+LLC E++S IL         EE+ Q++    A+    + GD F +   
Sbjct: 1   MAPSCYDVAASMLLCAEEHSSILCFEEEE---EEELQVVGRKRARSPEPDYGDDFGVDLF 57

Query: 83  PPQSDDYLGVLIQRESEYMPREDYGVR 3
           PPQS++ +  L+++E E+MPR DYG R
Sbjct: 58  PPQSEECVAGLVEKEREHMPRSDYGER 84


>ref|NP_001152238.1| cyclin delta-2 [Zea mays] gi|195654177|gb|ACG46556.1| cyclin
           delta-2 [Zea mays]
          Length = 338

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 35/87 (40%), Positives = 52/87 (59%), Gaps = 4/87 (4%)
 Frame = -2

Query: 251 MAPS-YDYASSVLLCVEDNSCILXXXXXXXGAEEDNQIICLSEAQ-RCRFNGDPFII--L 84
           MAPS YD A+S+LLC E++S IL         EE+ ++  +   + R    GD F +   
Sbjct: 1   MAPSCYDVAASMLLCAEEHSSILCFE------EEEEELEAVGRKRGRSPGYGDDFGVDLF 54

Query: 83  PPQSDDYLGVLIQRESEYMPREDYGVR 3
           PPQ+++ +  L++RE E+MPR DYG R
Sbjct: 55  PPQTEECVAGLVEREREHMPRADYGQR 81


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