BLASTX nr result

ID: Zingiber25_contig00026000 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00026000
         (460 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA98777.1| expressed protein [Oryza sativa Japonica Group]         57   2e-06

>gb|ABA98777.1| expressed protein [Oryza sativa Japonica Group]
          Length = 511

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 55/173 (31%), Positives = 74/173 (42%), Gaps = 34/173 (19%)
 Frame = +1

Query: 28  MAKKKSNPTAAAAVVGGNL---------------------------EGRLESLRDLNQIL 126
           MAKKKS+  AAAA   GN                            + + E L+ LN IL
Sbjct: 1   MAKKKSSAAAAAAAANGNGHHAAADGIVVNGNGFHAEAMEVEKQGGDQKAEKLKALNSIL 60

Query: 127 LKEMVERREQVRDLQSCVDRLSEDRFLFIDIDRSFSDLVVTSRITEIAAERPESEAALAA 306
           LKE  +RR QV  L S +D LS D       +R+ +   + + +   A E     A LAA
Sbjct: 61  LKEAADRRGQVAALTSRLDELSADDAALAAAERAVAQAALAAPLRAAADEVSALRARLAA 120

Query: 307 VQKMLEAVTSE-------RDAARGDLHAVLSEKDSALVELDRVKQGAEIRDVN 444
           V+  L +  S        +D A   L AV  EK   L +L R K+ AE+  V+
Sbjct: 121 VEGSLRSAESRGASEAAAKDEANARLEAVAEEKGHVL-KLLRAKE-AEVASVS 171


Top