BLASTX nr result

ID: Zingiber25_contig00025788 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00025788
         (406 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ88543.1| predicted protein [Hordeum vulgare subsp. vulgare]     57   3e-06
gb|EMS51779.1| hypothetical protein TRIUR3_31947 [Triticum urartu]     55   1e-05

>dbj|BAJ88543.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 158

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 10/82 (12%)
 Frame = +1

Query: 76  HLHEDSLRSHDMSKEKKSGALIDSKQGEVHVYSSLP----------PRPETKPPTTMQKY 225
           H H++  +    +K+K  G    + QG     ++ P          PR   +P    + Y
Sbjct: 77  HAHDEPAKHQIPTKKKDDGDAQVTSQGAEQEEAAQPQQKKWSRRTLPRRPHQPQQETRTY 136

Query: 226 PDNLDIAGMDYSPAKRKPPIHN 291
           PD +DIAGMDYSPA RKPPIHN
Sbjct: 137 PDLIDIAGMDYSPAARKPPIHN 158


>gb|EMS51779.1| hypothetical protein TRIUR3_31947 [Triticum urartu]
          Length = 154

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 35/79 (44%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
 Frame = +1

Query: 70  HYHLHEDSLRSHDMSKEKKSG-ALIDSKQG--EVHVYS--SLPPRPETKPPTTMQKYPDN 234
           H    + S   H ++ ++  G A + S  G  E   +S  +LP RPE +   T   YPD 
Sbjct: 79  HAEPDDASAAKHQIAPKRNDGDAQVTSHGGGQEEKTWSRRALPRRPEQQEART---YPDL 135

Query: 235 LDIAGMDYSPAKRKPPIHN 291
           +DIAGMDYSPA RKPPIHN
Sbjct: 136 IDIAGMDYSPAARKPPIHN 154


Top