BLASTX nr result

ID: Zingiber25_contig00025704 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00025704
         (481 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273777.2| PREDICTED: polyribonucleotide nucleotidyltra...   117   2e-24
emb|CBI34890.3| unnamed protein product [Vitis vinifera]              117   2e-24
ref|XP_006470281.1| PREDICTED: polyribonucleotide nucleotidyltra...   115   5e-24
ref|XP_006446552.1| hypothetical protein CICLE_v10014159mg [Citr...   115   5e-24
ref|XP_002524669.1| polyribonucleotide nucleotidyltransferase, p...   114   2e-23
gb|EOY02463.1| Polyribonucleotide nucleotidyltransferase, putati...   113   3e-23
ref|XP_004304642.1| PREDICTED: polyribonucleotide nucleotidyltra...   112   4e-23
gb|EMJ18896.1| hypothetical protein PRUPE_ppa000918mg [Prunus pe...   112   4e-23
ref|NP_196962.1| polyribonucleotide nucleotidyltransferase [Arab...   112   4e-23
sp|Q6KAI0.1|PNP2_ORYSJ RecName: Full=Polyribonucleotide nucleoti...   112   5e-23
ref|XP_003575367.1| PREDICTED: LOW QUALITY PROTEIN: polyribonucl...   112   5e-23
gb|EEC73607.1| hypothetical protein OsI_08089 [Oryza sativa Indi...   112   5e-23
ref|XP_006338583.1| PREDICTED: polyribonucleotide nucleotidyltra...   112   7e-23
ref|XP_006289585.1| hypothetical protein CARUB_v10003135mg [Caps...   112   7e-23
ref|XP_004164730.1| PREDICTED: LOW QUALITY PROTEIN: polyribonucl...   112   7e-23
ref|XP_004141096.1| PREDICTED: polyribonucleotide nucleotidyltra...   112   7e-23
ref|XP_002873678.1| hypothetical protein ARALYDRAFT_488299 [Arab...   112   7e-23
ref|XP_006648841.1| PREDICTED: polyribonucleotide nucleotidyltra...   111   9e-23
gb|ESW23003.1| hypothetical protein PHAVU_004G011100g [Phaseolus...   111   9e-23
ref|XP_002300042.2| hypothetical protein POPTR_0001s35070g [Popu...   111   9e-23

>ref|XP_002273777.2| PREDICTED: polyribonucleotide nucleotidyltransferase-like [Vitis
           vinifera]
          Length = 964

 Score =  117 bits (292), Expect = 2e-24
 Identities = 55/71 (77%), Positives = 66/71 (92%)
 Frame = -1

Query: 214 KVLEIFREEFEVGSRTVSIETGKIARFANGAVVIAMDDTNVLSTVASARGDGARDFLPLT 35
           KVLE F+EEFE+GSR+++ ETGKIARFANGAVV++MD+T VLSTVAS++GD ARDFLPLT
Sbjct: 53  KVLETFKEEFEIGSRSITFETGKIARFANGAVVMSMDETKVLSTVASSKGDAARDFLPLT 112

Query: 34  VDYQEKQYAQG 2
           VDYQEK +AQG
Sbjct: 113 VDYQEKHFAQG 123


>emb|CBI34890.3| unnamed protein product [Vitis vinifera]
          Length = 905

 Score =  117 bits (292), Expect = 2e-24
 Identities = 55/71 (77%), Positives = 66/71 (92%)
 Frame = -1

Query: 214 KVLEIFREEFEVGSRTVSIETGKIARFANGAVVIAMDDTNVLSTVASARGDGARDFLPLT 35
           KVLE F+EEFE+GSR+++ ETGKIARFANGAVV++MD+T VLSTVAS++GD ARDFLPLT
Sbjct: 2   KVLETFKEEFEIGSRSITFETGKIARFANGAVVMSMDETKVLSTVASSKGDAARDFLPLT 61

Query: 34  VDYQEKQYAQG 2
           VDYQEK +AQG
Sbjct: 62  VDYQEKHFAQG 72


>ref|XP_006470281.1| PREDICTED: polyribonucleotide nucleotidyltransferase 2,
           mitochondrial-like [Citrus sinensis]
          Length = 974

 Score =  115 bits (289), Expect = 5e-24
 Identities = 54/71 (76%), Positives = 64/71 (90%)
 Frame = -1

Query: 214 KVLEIFREEFEVGSRTVSIETGKIARFANGAVVIAMDDTNVLSTVASARGDGARDFLPLT 35
           KVLE F+EEFE+GSR +++ETGKIARFANGAVV+ MD+T VLSTV S++GD  RDFLPLT
Sbjct: 54  KVLETFKEEFEIGSRLITLETGKIARFANGAVVLGMDETKVLSTVTSSKGDSVRDFLPLT 113

Query: 34  VDYQEKQYAQG 2
           VDYQEKQ+AQG
Sbjct: 114 VDYQEKQFAQG 124


>ref|XP_006446552.1| hypothetical protein CICLE_v10014159mg [Citrus clementina]
           gi|557549163|gb|ESR59792.1| hypothetical protein
           CICLE_v10014159mg [Citrus clementina]
          Length = 973

 Score =  115 bits (289), Expect = 5e-24
 Identities = 54/71 (76%), Positives = 64/71 (90%)
 Frame = -1

Query: 214 KVLEIFREEFEVGSRTVSIETGKIARFANGAVVIAMDDTNVLSTVASARGDGARDFLPLT 35
           KVLE F+EEFE+GSR +++ETGKIARFANGAVV+ MD+T VLSTV S++GD  RDFLPLT
Sbjct: 54  KVLETFKEEFEIGSRLITLETGKIARFANGAVVLGMDETKVLSTVTSSKGDSVRDFLPLT 113

Query: 34  VDYQEKQYAQG 2
           VDYQEKQ+AQG
Sbjct: 114 VDYQEKQFAQG 124


>ref|XP_002524669.1| polyribonucleotide nucleotidyltransferase, putative [Ricinus
           communis] gi|223536030|gb|EEF37688.1| polyribonucleotide
           nucleotidyltransferase, putative [Ricinus communis]
          Length = 958

 Score =  114 bits (284), Expect = 2e-23
 Identities = 53/71 (74%), Positives = 64/71 (90%)
 Frame = -1

Query: 214 KVLEIFREEFEVGSRTVSIETGKIARFANGAVVIAMDDTNVLSTVASARGDGARDFLPLT 35
           KVLE F+EEFE+GS+ +S+ETG+IARFANGAVV++MD T VLSTV S++GD  RDFLPLT
Sbjct: 50  KVLETFKEEFEIGSQVISLETGEIARFANGAVVLSMDQTKVLSTVTSSKGDAVRDFLPLT 109

Query: 34  VDYQEKQYAQG 2
           VDYQEKQ+AQG
Sbjct: 110 VDYQEKQFAQG 120


>gb|EOY02463.1| Polyribonucleotide nucleotidyltransferase, putative isoform 1
           [Theobroma cacao]
          Length = 980

 Score =  113 bits (282), Expect = 3e-23
 Identities = 52/71 (73%), Positives = 63/71 (88%)
 Frame = -1

Query: 214 KVLEIFREEFEVGSRTVSIETGKIARFANGAVVIAMDDTNVLSTVASARGDGARDFLPLT 35
           K LE F+EEFE+GSR +S+ETGKIARFANGAVV+ M++T VLST+A+ +GD  RDFLPLT
Sbjct: 49  KFLESFKEEFEIGSRVISLETGKIARFANGAVVLGMEETKVLSTIAAGKGDAVRDFLPLT 108

Query: 34  VDYQEKQYAQG 2
           VDYQEKQ+AQG
Sbjct: 109 VDYQEKQFAQG 119


>ref|XP_004304642.1| PREDICTED: polyribonucleotide nucleotidyltransferase 2,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 969

 Score =  112 bits (281), Expect = 4e-23
 Identities = 52/71 (73%), Positives = 63/71 (88%)
 Frame = -1

Query: 214 KVLEIFREEFEVGSRTVSIETGKIARFANGAVVIAMDDTNVLSTVASARGDGARDFLPLT 35
           K+LE F E+FE+GSR +++ETGKIARFANG+VV+ MDDT VLSTV SA+GD  +DFLPLT
Sbjct: 54  KLLETFTEQFEIGSRLITLETGKIARFANGSVVLGMDDTRVLSTVCSAKGDAVKDFLPLT 113

Query: 34  VDYQEKQYAQG 2
           VDYQEKQ+AQG
Sbjct: 114 VDYQEKQFAQG 124


>gb|EMJ18896.1| hypothetical protein PRUPE_ppa000918mg [Prunus persica]
          Length = 962

 Score =  112 bits (281), Expect = 4e-23
 Identities = 52/71 (73%), Positives = 64/71 (90%)
 Frame = -1

Query: 214 KVLEIFREEFEVGSRTVSIETGKIARFANGAVVIAMDDTNVLSTVASARGDGARDFLPLT 35
           KVLE F+EEFE+G R +++E+GKIARFANGAVV+ M++T VLSTVA+A+GD  RDFLPLT
Sbjct: 54  KVLETFKEEFEIGDRLITLESGKIARFANGAVVLGMEETKVLSTVAAAKGDAVRDFLPLT 113

Query: 34  VDYQEKQYAQG 2
           VDYQEKQ+AQG
Sbjct: 114 VDYQEKQFAQG 124


>ref|NP_196962.1| polyribonucleotide nucleotidyltransferase [Arabidopsis thaliana]
           gi|75336830|sp|Q9S7G6.1|PNP2_ARATH RecName:
           Full=Polyribonucleotide nucleotidyltransferase 2,
           mitochondrial; Short=AtmtPNPase; AltName:
           Full=Polynucleotide phosphorylase 2; Short=PNPase 2;
           Flags: Precursor gi|4971998|emb|CAB43864.1|
           polynucleotide phosphorylase [Arabidopsis thaliana]
           gi|4972000|emb|CAB43865.1| polynucleotide phosphorylase
           [Arabidopsis thaliana] gi|7573307|emb|CAB87625.1|
           polynucleotide phosphorylase [Arabidopsis thaliana]
           gi|332004667|gb|AED92050.1| polyribonucleotide
           nucleotidyltransferase [Arabidopsis thaliana]
          Length = 991

 Score =  112 bits (281), Expect = 4e-23
 Identities = 55/71 (77%), Positives = 61/71 (85%)
 Frame = -1

Query: 214 KVLEIFREEFEVGSRTVSIETGKIARFANGAVVIAMDDTNVLSTVASARGDGARDFLPLT 35
           K+LE F+EEFEVGSR VS ETGKIARFANG+VV+ MD+T VLSTV  A+ D  RDFLPLT
Sbjct: 48  KILESFKEEFEVGSRVVSFETGKIARFANGSVVLGMDETKVLSTVTCAKTDSPRDFLPLT 107

Query: 34  VDYQEKQYAQG 2
           VDYQEKQYAQG
Sbjct: 108 VDYQEKQYAQG 118


>sp|Q6KAI0.1|PNP2_ORYSJ RecName: Full=Polyribonucleotide nucleotidyltransferase 2,
           mitochondrial; AltName: Full=Polynucleotide
           phosphorylase 2; Short=PNPase 2; Flags: Precursor
           gi|47847669|dbj|BAD21450.1| putative polyribonucleotide
           nucleotidyltransferase [Oryza sativa Japonica Group]
          Length = 982

 Score =  112 bits (280), Expect = 5e-23
 Identities = 56/73 (76%), Positives = 65/73 (89%), Gaps = 1/73 (1%)
 Frame = -1

Query: 217 RKVLEIFREEFEVGSRTVSIETGKIARFANGAVVIAMDDTNVLSTVASAR-GDGARDFLP 41
           RKVLE FREEFE+G R +S ETGK+ARFANG+VVI+MDDT+VLSTVA+A+  +  RDFLP
Sbjct: 55  RKVLESFREEFEIGGRVISFETGKMARFANGSVVISMDDTHVLSTVAAAKSSEPVRDFLP 114

Query: 40  LTVDYQEKQYAQG 2
           LTVDYQEKQYAQG
Sbjct: 115 LTVDYQEKQYAQG 127


>ref|XP_003575367.1| PREDICTED: LOW QUALITY PROTEIN: polyribonucleotide
           nucleotidyltransferase-like [Brachypodium distachyon]
          Length = 983

 Score =  112 bits (280), Expect = 5e-23
 Identities = 56/73 (76%), Positives = 65/73 (89%), Gaps = 1/73 (1%)
 Frame = -1

Query: 217 RKVLEIFREEFEVGSRTVSIETGKIARFANGAVVIAMDDTNVLSTVASAR-GDGARDFLP 41
           RKVLE FREEFE+G R ++ ETGKIARFANG+VVI+MDDT+VLSTVA+++  D  RDFLP
Sbjct: 51  RKVLESFREEFEIGGRLIAFETGKIARFANGSVVISMDDTHVLSTVAASKSSDPVRDFLP 110

Query: 40  LTVDYQEKQYAQG 2
           LTVDYQEKQYAQG
Sbjct: 111 LTVDYQEKQYAQG 123


>gb|EEC73607.1| hypothetical protein OsI_08089 [Oryza sativa Indica Group]
          Length = 1030

 Score =  112 bits (280), Expect = 5e-23
 Identities = 56/73 (76%), Positives = 65/73 (89%), Gaps = 1/73 (1%)
 Frame = -1

Query: 217 RKVLEIFREEFEVGSRTVSIETGKIARFANGAVVIAMDDTNVLSTVASAR-GDGARDFLP 41
           RKVLE FREEFE+G R +S ETGK+ARFANG+VVI+MDDT+VLSTVA+A+  +  RDFLP
Sbjct: 55  RKVLESFREEFEIGGRVISFETGKMARFANGSVVISMDDTHVLSTVAAAKSSEPVRDFLP 114

Query: 40  LTVDYQEKQYAQG 2
           LTVDYQEKQYAQG
Sbjct: 115 LTVDYQEKQYAQG 127


>ref|XP_006338583.1| PREDICTED: polyribonucleotide nucleotidyltransferase 2,
           mitochondrial-like [Solanum tuberosum]
          Length = 977

 Score =  112 bits (279), Expect = 7e-23
 Identities = 52/70 (74%), Positives = 64/70 (91%)
 Frame = -1

Query: 214 KVLEIFREEFEVGSRTVSIETGKIARFANGAVVIAMDDTNVLSTVASARGDGARDFLPLT 35
           KVLE F EEFE+GSR +++ETGKIARFANG+V++AM++T VLSTVAS++GD  RDFLPLT
Sbjct: 55  KVLETFAEEFEIGSRKITLETGKIARFANGSVILAMEETKVLSTVASSKGDAIRDFLPLT 114

Query: 34  VDYQEKQYAQ 5
           VDYQEKQ+AQ
Sbjct: 115 VDYQEKQFAQ 124


>ref|XP_006289585.1| hypothetical protein CARUB_v10003135mg [Capsella rubella]
           gi|482558291|gb|EOA22483.1| hypothetical protein
           CARUB_v10003135mg [Capsella rubella]
          Length = 944

 Score =  112 bits (279), Expect = 7e-23
 Identities = 55/71 (77%), Positives = 60/71 (84%)
 Frame = -1

Query: 214 KVLEIFREEFEVGSRTVSIETGKIARFANGAVVIAMDDTNVLSTVASARGDGARDFLPLT 35
           K+LE F+EEFEVGSR VS ETGKIARFANG+VV+ MD T VLSTV  A+ D  RDFLPLT
Sbjct: 48  KILESFKEEFEVGSRVVSFETGKIARFANGSVVLGMDQTKVLSTVTCAKTDSPRDFLPLT 107

Query: 34  VDYQEKQYAQG 2
           VDYQEKQYAQG
Sbjct: 108 VDYQEKQYAQG 118


>ref|XP_004164730.1| PREDICTED: LOW QUALITY PROTEIN: polyribonucleotide
           nucleotidyltransferase 2, mitochondrial-like [Cucumis
           sativus]
          Length = 955

 Score =  112 bits (279), Expect = 7e-23
 Identities = 54/71 (76%), Positives = 62/71 (87%)
 Frame = -1

Query: 214 KVLEIFREEFEVGSRTVSIETGKIARFANGAVVIAMDDTNVLSTVASARGDGARDFLPLT 35
           KVLE F E FE+GSR V +ETGKIARFANGA V+ +++T VLSTVASA+GD ARDFLPLT
Sbjct: 54  KVLETFEEVFEIGSRLVKLETGKIARFANGAAVLGIEETKVLSTVASAKGDAARDFLPLT 113

Query: 34  VDYQEKQYAQG 2
           VDYQEKQ+AQG
Sbjct: 114 VDYQEKQFAQG 124


>ref|XP_004141096.1| PREDICTED: polyribonucleotide nucleotidyltransferase 2,
           mitochondrial-like [Cucumis sativus]
          Length = 1032

 Score =  112 bits (279), Expect = 7e-23
 Identities = 54/71 (76%), Positives = 62/71 (87%)
 Frame = -1

Query: 214 KVLEIFREEFEVGSRTVSIETGKIARFANGAVVIAMDDTNVLSTVASARGDGARDFLPLT 35
           KVLE F E FE+GSR V +ETGKIARFANGA V+ +++T VLSTVASA+GD ARDFLPLT
Sbjct: 54  KVLETFEEVFEIGSRLVKLETGKIARFANGAAVLGIEETKVLSTVASAKGDAARDFLPLT 113

Query: 34  VDYQEKQYAQG 2
           VDYQEKQ+AQG
Sbjct: 114 VDYQEKQFAQG 124


>ref|XP_002873678.1| hypothetical protein ARALYDRAFT_488299 [Arabidopsis lyrata subsp.
           lyrata] gi|297319515|gb|EFH49937.1| hypothetical protein
           ARALYDRAFT_488299 [Arabidopsis lyrata subsp. lyrata]
          Length = 992

 Score =  112 bits (279), Expect = 7e-23
 Identities = 55/71 (77%), Positives = 60/71 (84%)
 Frame = -1

Query: 214 KVLEIFREEFEVGSRTVSIETGKIARFANGAVVIAMDDTNVLSTVASARGDGARDFLPLT 35
           K+LE F+EEFEVGSR VS ETGKIARFANG+VV+ MD T VLSTV  A+ D  RDFLPLT
Sbjct: 48  KILESFKEEFEVGSRVVSFETGKIARFANGSVVLGMDQTKVLSTVTCAKTDSPRDFLPLT 107

Query: 34  VDYQEKQYAQG 2
           VDYQEKQYAQG
Sbjct: 108 VDYQEKQYAQG 118


>ref|XP_006648841.1| PREDICTED: polyribonucleotide nucleotidyltransferase 2,
           mitochondrial-like, partial [Oryza brachyantha]
          Length = 947

 Score =  111 bits (278), Expect = 9e-23
 Identities = 56/73 (76%), Positives = 65/73 (89%), Gaps = 1/73 (1%)
 Frame = -1

Query: 217 RKVLEIFREEFEVGSRTVSIETGKIARFANGAVVIAMDDTNVLSTVASAR-GDGARDFLP 41
           RKVLE FR+EFEVG R +S ETGK+ARFANG+VVI+MDDT+VLSTVA+A+  +  RDFLP
Sbjct: 24  RKVLESFRDEFEVGGRVISFETGKMARFANGSVVISMDDTHVLSTVAAAKSSEPVRDFLP 83

Query: 40  LTVDYQEKQYAQG 2
           LTVDYQEKQYAQG
Sbjct: 84  LTVDYQEKQYAQG 96


>gb|ESW23003.1| hypothetical protein PHAVU_004G011100g [Phaseolus vulgaris]
          Length = 982

 Score =  111 bits (278), Expect = 9e-23
 Identities = 52/71 (73%), Positives = 63/71 (88%)
 Frame = -1

Query: 214 KVLEIFREEFEVGSRTVSIETGKIARFANGAVVIAMDDTNVLSTVASARGDGARDFLPLT 35
           K L+ F E+FE+GSR +++ETGKIARFANGAVV+ M++TNVLSTV SA+GD  RDFLPLT
Sbjct: 42  KHLDTFTEQFEIGSRVITLETGKIARFANGAVVLTMENTNVLSTVTSAKGDAVRDFLPLT 101

Query: 34  VDYQEKQYAQG 2
           VDYQEKQ+AQG
Sbjct: 102 VDYQEKQFAQG 112


>ref|XP_002300042.2| hypothetical protein POPTR_0001s35070g [Populus trichocarpa]
           gi|550348918|gb|EEE84847.2| hypothetical protein
           POPTR_0001s35070g [Populus trichocarpa]
          Length = 961

 Score =  111 bits (278), Expect = 9e-23
 Identities = 52/71 (73%), Positives = 62/71 (87%)
 Frame = -1

Query: 214 KVLEIFREEFEVGSRTVSIETGKIARFANGAVVIAMDDTNVLSTVASARGDGARDFLPLT 35
           K LE FREEFE+GSR ++ ETGKIARFANG+VV+ M++T VLSTV S++GD  RDFLPLT
Sbjct: 51  KFLETFREEFEIGSRLITFETGKIARFANGSVVLGMEETKVLSTVTSSKGDSVRDFLPLT 110

Query: 34  VDYQEKQYAQG 2
           VDYQEKQ+AQG
Sbjct: 111 VDYQEKQFAQG 121


Top