BLASTX nr result
ID: Zingiber25_contig00025623
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00025623
(270 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001048841.1| Os03g0128500 [Oryza sativa Japonica Group] g... 159 3e-37
dbj|BAA85393.1| unnamed protein product [Oryza sativa Japonica G... 159 3e-37
gb|EEC74438.1| hypothetical protein OsI_09828 [Oryza sativa Indi... 159 3e-37
ref|XP_004985872.1| PREDICTED: DNA polymerase delta small subuni... 159 5e-37
ref|XP_002465940.1| hypothetical protein SORBIDRAFT_01g048590 [S... 158 8e-37
ref|NP_001168398.1| hypothetical protein [Zea mays] gi|223948007... 158 8e-37
gb|AAN17387.1| Putataive DNA polymerase delta small subunit [Ory... 155 5e-36
ref|XP_006649322.1| PREDICTED: DNA polymerase delta small subuni... 151 8e-35
ref|XP_003521214.1| PREDICTED: DNA polymerase delta small subuni... 150 2e-34
ref|XP_002279533.1| PREDICTED: DNA polymerase delta small subuni... 150 2e-34
emb|CAN71889.1| hypothetical protein VITISV_040861 [Vitis vinifera] 150 2e-34
ref|XP_004136567.1| PREDICTED: DNA polymerase delta small subuni... 149 3e-34
ref|XP_006294235.1| hypothetical protein CARUB_v10023232mg [Caps... 149 5e-34
ref|XP_004234825.1| PREDICTED: DNA polymerase delta small subuni... 149 5e-34
ref|XP_004234824.1| PREDICTED: DNA polymerase delta small subuni... 149 5e-34
ref|XP_003554206.1| PREDICTED: DNA polymerase delta small subuni... 149 5e-34
ref|XP_006492859.1| PREDICTED: DNA polymerase delta small subuni... 148 6e-34
gb|EMT28193.1| DNA polymerase delta small subunit [Aegilops taus... 148 6e-34
gb|EMJ05588.1| hypothetical protein PRUPE_ppa005894mg [Prunus pe... 148 6e-34
ref|XP_003558911.1| PREDICTED: DNA polymerase delta small subuni... 147 1e-33
>ref|NP_001048841.1| Os03g0128500 [Oryza sativa Japonica Group]
gi|13431489|sp|Q9LRE5.1|DPOD2_ORYSJ RecName: Full=DNA
polymerase delta small subunit
gi|9188572|dbj|BAA99574.1| OsPol delta small subunit
[Oryza sativa Japonica Group]
gi|108705983|gb|ABF93778.1| DNA polymerase delta small
subunit, putative, expressed [Oryza sativa Japonica
Group] gi|113547312|dbj|BAF10755.1| Os03g0128500 [Oryza
sativa Japonica Group] gi|215695508|dbj|BAG90699.1|
unnamed protein product [Oryza sativa Japonica Group]
gi|222624129|gb|EEE58261.1| hypothetical protein
OsJ_09265 [Oryza sativa Japonica Group]
Length = 429
Score = 159 bits (403), Expect = 3e-37
Identities = 72/89 (80%), Positives = 84/89 (94%)
Frame = +2
Query: 2 NNLDERFEIHKEKYKGQQYSHIYFSRLHHMRNLLYSLVPNWKPNLPVKTILGLEEGKECI 181
+NLDER+ I EKY+GQQYSHIYF+RLHHMRNLL++LVP+WKP+LPV T+LGLEEGK+CI
Sbjct: 9 SNLDERYAIQGEKYQGQQYSHIYFTRLHHMRNLLHALVPSWKPHLPVTTVLGLEEGKDCI 68
Query: 182 IVGTIYKHMKLKPSILDEYSKERSKVPLV 268
IVGT+YKHMKLKPSILDEYSKERS +PLV
Sbjct: 69 IVGTLYKHMKLKPSILDEYSKERSAIPLV 97
>dbj|BAA85393.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 445
Score = 159 bits (403), Expect = 3e-37
Identities = 72/89 (80%), Positives = 84/89 (94%)
Frame = +2
Query: 2 NNLDERFEIHKEKYKGQQYSHIYFSRLHHMRNLLYSLVPNWKPNLPVKTILGLEEGKECI 181
+NLDER+ I EKY+GQQYSHIYF+RLHHMRNLL++LVP+WKP+LPV T+LGLEEGK+CI
Sbjct: 9 SNLDERYAIQGEKYQGQQYSHIYFTRLHHMRNLLHALVPSWKPHLPVTTVLGLEEGKDCI 68
Query: 182 IVGTIYKHMKLKPSILDEYSKERSKVPLV 268
IVGT+YKHMKLKPSILDEYSKERS +PLV
Sbjct: 69 IVGTLYKHMKLKPSILDEYSKERSAIPLV 97
>gb|EEC74438.1| hypothetical protein OsI_09828 [Oryza sativa Indica Group]
Length = 429
Score = 159 bits (403), Expect = 3e-37
Identities = 72/89 (80%), Positives = 84/89 (94%)
Frame = +2
Query: 2 NNLDERFEIHKEKYKGQQYSHIYFSRLHHMRNLLYSLVPNWKPNLPVKTILGLEEGKECI 181
+NLDER+ I EKY+GQQYSHIYF+RLHHMRNLL++LVP+WKP+LPV T+LGLEEGK+CI
Sbjct: 9 SNLDERYAIQGEKYQGQQYSHIYFTRLHHMRNLLHALVPSWKPHLPVTTVLGLEEGKDCI 68
Query: 182 IVGTIYKHMKLKPSILDEYSKERSKVPLV 268
IVGT+YKHMKLKPSILDEYSKERS +PLV
Sbjct: 69 IVGTLYKHMKLKPSILDEYSKERSAIPLV 97
>ref|XP_004985872.1| PREDICTED: DNA polymerase delta small subunit-like [Setaria
italica]
Length = 435
Score = 159 bits (401), Expect = 5e-37
Identities = 72/89 (80%), Positives = 83/89 (93%)
Frame = +2
Query: 2 NNLDERFEIHKEKYKGQQYSHIYFSRLHHMRNLLYSLVPNWKPNLPVKTILGLEEGKECI 181
+NLDER+ I EKY+GQQYSHIYF+RLHHMRNLL++LVP+WKP LPV T+LGLEEGK+CI
Sbjct: 15 SNLDERYGIQGEKYQGQQYSHIYFTRLHHMRNLLHALVPSWKPQLPVTTVLGLEEGKDCI 74
Query: 182 IVGTIYKHMKLKPSILDEYSKERSKVPLV 268
IVGT+YKHMKLKPSILDEYSKERS +PLV
Sbjct: 75 IVGTLYKHMKLKPSILDEYSKERSAIPLV 103
>ref|XP_002465940.1| hypothetical protein SORBIDRAFT_01g048590 [Sorghum bicolor]
gi|241919794|gb|EER92938.1| hypothetical protein
SORBIDRAFT_01g048590 [Sorghum bicolor]
Length = 435
Score = 158 bits (399), Expect = 8e-37
Identities = 71/89 (79%), Positives = 83/89 (93%)
Frame = +2
Query: 2 NNLDERFEIHKEKYKGQQYSHIYFSRLHHMRNLLYSLVPNWKPNLPVKTILGLEEGKECI 181
+NLDER+ I EKY+GQQYSHIYF+RLHHMRNLL++LVP+WKP LPV T+LGLEEGK+CI
Sbjct: 15 SNLDERYAIQGEKYQGQQYSHIYFTRLHHMRNLLHALVPSWKPQLPVTTVLGLEEGKDCI 74
Query: 182 IVGTIYKHMKLKPSILDEYSKERSKVPLV 268
IVGT+YKHMKLKPSILDEY+KERS +PLV
Sbjct: 75 IVGTLYKHMKLKPSILDEYAKERSAIPLV 103
>ref|NP_001168398.1| hypothetical protein [Zea mays] gi|223948007|gb|ACN28087.1| unknown
[Zea mays] gi|414864557|tpg|DAA43114.1| TPA:
hypothetical protein ZEAMMB73_615392 [Zea mays]
Length = 435
Score = 158 bits (399), Expect = 8e-37
Identities = 71/89 (79%), Positives = 83/89 (93%)
Frame = +2
Query: 2 NNLDERFEIHKEKYKGQQYSHIYFSRLHHMRNLLYSLVPNWKPNLPVKTILGLEEGKECI 181
+NLDER+ I EKY+GQQYSHIYF+RLHHMRNLL++LVP+WKP LPV T+LGLEEGK+CI
Sbjct: 15 SNLDERYAIQGEKYQGQQYSHIYFTRLHHMRNLLHALVPSWKPQLPVTTVLGLEEGKDCI 74
Query: 182 IVGTIYKHMKLKPSILDEYSKERSKVPLV 268
IVGT+YKHMKLKPSILDEY+KERS +PLV
Sbjct: 75 IVGTLYKHMKLKPSILDEYAKERSAIPLV 103
>gb|AAN17387.1| Putataive DNA polymerase delta small subunit [Oryza sativa Japonica
Group]
Length = 404
Score = 155 bits (392), Expect = 5e-36
Identities = 70/86 (81%), Positives = 81/86 (94%)
Frame = +2
Query: 11 DERFEIHKEKYKGQQYSHIYFSRLHHMRNLLYSLVPNWKPNLPVKTILGLEEGKECIIVG 190
DER+ I EKY+GQQYSHIYF+RLHHMRNLL++LVP+WKP+LPV T+LGLEEGK+CIIVG
Sbjct: 8 DERYAIQGEKYQGQQYSHIYFTRLHHMRNLLHALVPSWKPHLPVTTVLGLEEGKDCIIVG 67
Query: 191 TIYKHMKLKPSILDEYSKERSKVPLV 268
T+YKHMKLKPSILDEYSKERS +PLV
Sbjct: 68 TLYKHMKLKPSILDEYSKERSAIPLV 93
>ref|XP_006649322.1| PREDICTED: DNA polymerase delta small subunit-like [Oryza
brachyantha]
Length = 429
Score = 151 bits (382), Expect = 8e-35
Identities = 69/89 (77%), Positives = 81/89 (91%)
Frame = +2
Query: 2 NNLDERFEIHKEKYKGQQYSHIYFSRLHHMRNLLYSLVPNWKPNLPVKTILGLEEGKECI 181
++LDER+ I EKY+GQQYSHIY++RLHHMRNLL+ LV WKP+LPV T+LGLEEGK+CI
Sbjct: 9 SSLDERYAIQGEKYQGQQYSHIYYTRLHHMRNLLHPLVTAWKPHLPVTTVLGLEEGKDCI 68
Query: 182 IVGTIYKHMKLKPSILDEYSKERSKVPLV 268
IVGT+YKHMKLKPSILDEYSKERS +PLV
Sbjct: 69 IVGTLYKHMKLKPSILDEYSKERSAIPLV 97
>ref|XP_003521214.1| PREDICTED: DNA polymerase delta small subunit-like [Glycine max]
Length = 433
Score = 150 bits (378), Expect = 2e-34
Identities = 71/88 (80%), Positives = 78/88 (88%)
Frame = +2
Query: 5 NLDERFEIHKEKYKGQQYSHIYFSRLHHMRNLLYSLVPNWKPNLPVKTILGLEEGKECII 184
+LDE FEI KE Y+GQQYS IYF+RLH MR LLYSLVP+WKPN PV T+LGLEEGKEC+I
Sbjct: 12 SLDEAFEIGKEAYQGQQYSQIYFARLHLMRTLLYSLVPHWKPNFPVCTVLGLEEGKECVI 71
Query: 185 VGTIYKHMKLKPSILDEYSKERSKVPLV 268
VGT+YKHMKLKP ILDEYSKERS VPLV
Sbjct: 72 VGTLYKHMKLKPCILDEYSKERSVVPLV 99
>ref|XP_002279533.1| PREDICTED: DNA polymerase delta small subunit [Vitis vinifera]
gi|297739835|emb|CBI30017.3| unnamed protein product
[Vitis vinifera]
Length = 439
Score = 150 bits (378), Expect = 2e-34
Identities = 69/88 (78%), Positives = 78/88 (88%)
Frame = +2
Query: 5 NLDERFEIHKEKYKGQQYSHIYFSRLHHMRNLLYSLVPNWKPNLPVKTILGLEEGKECII 184
+LDE+F I KE Y+GQQYS IYF+RLH MR L+YSL+PNWKP+LPV T+LGLEEGKECII
Sbjct: 18 SLDEKFRIEKETYRGQQYSQIYFARLHMMRTLIYSLIPNWKPHLPVCTVLGLEEGKECII 77
Query: 185 VGTIYKHMKLKPSILDEYSKERSKVPLV 268
VGT+YKHMKLKP ILDEYSKERS PLV
Sbjct: 78 VGTLYKHMKLKPCILDEYSKERSVAPLV 105
>emb|CAN71889.1| hypothetical protein VITISV_040861 [Vitis vinifera]
Length = 439
Score = 150 bits (378), Expect = 2e-34
Identities = 69/88 (78%), Positives = 78/88 (88%)
Frame = +2
Query: 5 NLDERFEIHKEKYKGQQYSHIYFSRLHHMRNLLYSLVPNWKPNLPVKTILGLEEGKECII 184
+LDE+F I KE Y+GQQYS IYF+RLH MR L+YSL+PNWKP+LPV T+LGLEEGKECII
Sbjct: 18 SLDEKFRIEKETYRGQQYSQIYFARLHMMRTLIYSLIPNWKPHLPVCTVLGLEEGKECII 77
Query: 185 VGTIYKHMKLKPSILDEYSKERSKVPLV 268
VGT+YKHMKLKP ILDEYSKERS PLV
Sbjct: 78 VGTLYKHMKLKPCILDEYSKERSVAPLV 105
>ref|XP_004136567.1| PREDICTED: DNA polymerase delta small subunit-like [Cucumis
sativus] gi|449526900|ref|XP_004170451.1| PREDICTED: DNA
polymerase delta small subunit-like [Cucumis sativus]
Length = 438
Score = 149 bits (377), Expect = 3e-34
Identities = 67/86 (77%), Positives = 79/86 (91%)
Frame = +2
Query: 11 DERFEIHKEKYKGQQYSHIYFSRLHHMRNLLYSLVPNWKPNLPVKTILGLEEGKECIIVG 190
DE+++I KE YKGQQYSHIYF+RLH MR +L+SLV NWKP+LPV T+LGLEEGKEC+IVG
Sbjct: 20 DEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPHLPVSTVLGLEEGKECVIVG 79
Query: 191 TIYKHMKLKPSILDEYSKERSKVPLV 268
T+YKHMKLKP+ILDEYSKERS +PLV
Sbjct: 80 TVYKHMKLKPTILDEYSKERSAIPLV 105
>ref|XP_006294235.1| hypothetical protein CARUB_v10023232mg [Capsella rubella]
gi|482562943|gb|EOA27133.1| hypothetical protein
CARUB_v10023232mg [Capsella rubella]
Length = 439
Score = 149 bits (375), Expect = 5e-34
Identities = 69/89 (77%), Positives = 77/89 (86%)
Frame = +2
Query: 2 NNLDERFEIHKEKYKGQQYSHIYFSRLHHMRNLLYSLVPNWKPNLPVKTILGLEEGKECI 181
N LDERFEIHKE Y+GQQYS IYF+RLH MR LLYSL P WKP+LPV +LGLEEGK+CI
Sbjct: 17 NYLDERFEIHKEMYRGQQYSQIYFARLHLMRTLLYSLAPTWKPHLPVCKVLGLEEGKDCI 76
Query: 182 IVGTIYKHMKLKPSILDEYSKERSKVPLV 268
IVGT++KHMKLKP +LDEYSKERS PLV
Sbjct: 77 IVGTLFKHMKLKPCVLDEYSKERSVTPLV 105
>ref|XP_004234825.1| PREDICTED: DNA polymerase delta small subunit-like isoform 2
[Solanum lycopersicum]
Length = 442
Score = 149 bits (375), Expect = 5e-34
Identities = 70/88 (79%), Positives = 78/88 (88%)
Frame = +2
Query: 5 NLDERFEIHKEKYKGQQYSHIYFSRLHHMRNLLYSLVPNWKPNLPVKTILGLEEGKECII 184
+LDE F I KE Y+GQQYS IYF+RLH MR LLYS++PNWKP+LPV T+LGLEEGKECII
Sbjct: 22 SLDESFGIQKEVYRGQQYSQIYFARLHLMRTLLYSIIPNWKPHLPVCTVLGLEEGKECII 81
Query: 185 VGTIYKHMKLKPSILDEYSKERSKVPLV 268
VGT+YKHMKLKPSILDEYSKERS PLV
Sbjct: 82 VGTLYKHMKLKPSILDEYSKERSASPLV 109
>ref|XP_004234824.1| PREDICTED: DNA polymerase delta small subunit-like isoform 1
[Solanum lycopersicum]
Length = 461
Score = 149 bits (375), Expect = 5e-34
Identities = 70/88 (79%), Positives = 78/88 (88%)
Frame = +2
Query: 5 NLDERFEIHKEKYKGQQYSHIYFSRLHHMRNLLYSLVPNWKPNLPVKTILGLEEGKECII 184
+LDE F I KE Y+GQQYS IYF+RLH MR LLYS++PNWKP+LPV T+LGLEEGKECII
Sbjct: 22 SLDESFGIQKEVYRGQQYSQIYFARLHLMRTLLYSIIPNWKPHLPVCTVLGLEEGKECII 81
Query: 185 VGTIYKHMKLKPSILDEYSKERSKVPLV 268
VGT+YKHMKLKPSILDEYSKERS PLV
Sbjct: 82 VGTLYKHMKLKPSILDEYSKERSASPLV 109
>ref|XP_003554206.1| PREDICTED: DNA polymerase delta small subunit-like isoform X1
[Glycine max] gi|571557295|ref|XP_006604386.1|
PREDICTED: DNA polymerase delta small subunit-like
isoform X2 [Glycine max]
Length = 433
Score = 149 bits (375), Expect = 5e-34
Identities = 70/88 (79%), Positives = 78/88 (88%)
Frame = +2
Query: 5 NLDERFEIHKEKYKGQQYSHIYFSRLHHMRNLLYSLVPNWKPNLPVKTILGLEEGKECII 184
+LDE FEI KE Y+GQQYS IYF+RLH MR LLYSL+P+WKPN PV T+LGLEEGKEC+I
Sbjct: 12 SLDEAFEIGKETYQGQQYSQIYFARLHLMRTLLYSLIPHWKPNSPVCTVLGLEEGKECVI 71
Query: 185 VGTIYKHMKLKPSILDEYSKERSKVPLV 268
VGT+YKHMKLKP ILDEYSKERS VPLV
Sbjct: 72 VGTLYKHMKLKPCILDEYSKERSVVPLV 99
>ref|XP_006492859.1| PREDICTED: DNA polymerase delta small subunit-like [Citrus
sinensis]
Length = 439
Score = 148 bits (374), Expect = 6e-34
Identities = 69/88 (78%), Positives = 78/88 (88%)
Frame = +2
Query: 5 NLDERFEIHKEKYKGQQYSHIYFSRLHHMRNLLYSLVPNWKPNLPVKTILGLEEGKECII 184
+LDE FEI KE Y+GQQYS IYF+RLH MR LLYSLVPNWKP+LP+ T+L LEEG+ECII
Sbjct: 19 SLDEPFEIQKETYRGQQYSQIYFARLHLMRTLLYSLVPNWKPHLPICTVLELEEGRECII 78
Query: 185 VGTIYKHMKLKPSILDEYSKERSKVPLV 268
+GT+YKHMKLKPSILDEYSKERS PLV
Sbjct: 79 IGTLYKHMKLKPSILDEYSKERSTTPLV 106
>gb|EMT28193.1| DNA polymerase delta small subunit [Aegilops tauschii]
Length = 429
Score = 148 bits (374), Expect = 6e-34
Identities = 66/89 (74%), Positives = 82/89 (92%)
Frame = +2
Query: 2 NNLDERFEIHKEKYKGQQYSHIYFSRLHHMRNLLYSLVPNWKPNLPVKTILGLEEGKECI 181
+NLDER+ I E+Y+GQQYSHIY++RLHHMR LL++LVP+ KP+LPV T+LGLEEGK+C+
Sbjct: 9 SNLDERYTIQGERYQGQQYSHIYYTRLHHMRTLLHALVPSRKPHLPVTTVLGLEEGKDCV 68
Query: 182 IVGTIYKHMKLKPSILDEYSKERSKVPLV 268
+VGT+YKHMKLKPSILDEYSKERS +PLV
Sbjct: 69 LVGTLYKHMKLKPSILDEYSKERSAIPLV 97
>gb|EMJ05588.1| hypothetical protein PRUPE_ppa005894mg [Prunus persica]
Length = 438
Score = 148 bits (374), Expect = 6e-34
Identities = 70/89 (78%), Positives = 77/89 (86%)
Frame = +2
Query: 2 NNLDERFEIHKEKYKGQQYSHIYFSRLHHMRNLLYSLVPNWKPNLPVKTILGLEEGKECI 181
N LDERFEI KE Y+GQQYS IYF+RLH MR LLYSLVPNWKP+LPV T+LGLE+ KECI
Sbjct: 17 NLLDERFEIQKEMYRGQQYSQIYFARLHMMRTLLYSLVPNWKPHLPVCTVLGLEKDKECI 76
Query: 182 IVGTIYKHMKLKPSILDEYSKERSKVPLV 268
+VGT+YKHMKLKP ILDEYSK RS PLV
Sbjct: 77 VVGTLYKHMKLKPCILDEYSKTRSTTPLV 105
>ref|XP_003558911.1| PREDICTED: DNA polymerase delta small subunit-like [Brachypodium
distachyon]
Length = 429
Score = 147 bits (371), Expect = 1e-33
Identities = 66/89 (74%), Positives = 81/89 (91%)
Frame = +2
Query: 2 NNLDERFEIHKEKYKGQQYSHIYFSRLHHMRNLLYSLVPNWKPNLPVKTILGLEEGKECI 181
+ LDER+ I E+Y+GQQYSHIYF+RLHHMRN+L +LVP+ KP+LPV T+LGLEEGK+C+
Sbjct: 9 STLDERYTIQGERYQGQQYSHIYFTRLHHMRNILRALVPSRKPHLPVTTVLGLEEGKDCV 68
Query: 182 IVGTIYKHMKLKPSILDEYSKERSKVPLV 268
+VGT+YKHMKLKPSILDEYSKERS +PLV
Sbjct: 69 LVGTLYKHMKLKPSILDEYSKERSAIPLV 97