BLASTX nr result
ID: Zingiber25_contig00025498
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00025498
(982 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002282496.1| PREDICTED: putative mediator of RNA polymera... 367 5e-99
emb|CAN68925.1| hypothetical protein VITISV_044247 [Vitis vinifera] 360 4e-97
ref|XP_006372643.1| RNA polymerase transcriptional regulation me... 360 5e-97
ref|XP_002331927.1| predicted protein [Populus trichocarpa] 355 1e-95
gb|EOY26988.1| RNA polymerase transcriptional regulation mediato... 355 2e-95
ref|XP_006585556.1| PREDICTED: mediator of RNA polymerase II tra... 353 7e-95
ref|XP_002515912.1| RNA polymerase II mediator complex subunit, ... 351 3e-94
gb|EMJ18951.1| hypothetical protein PRUPE_ppa010369mg [Prunus pe... 350 4e-94
ref|XP_006343025.1| PREDICTED: mediator of RNA polymerase II tra... 350 6e-94
gb|EEC80233.1| hypothetical protein OsI_22170 [Oryza sativa Indi... 349 1e-93
ref|XP_004149176.1| PREDICTED: LOW QUALITY PROTEIN: mediator of ... 347 3e-93
ref|XP_003531638.1| PREDICTED: mediator of RNA polymerase II tra... 347 3e-93
gb|EXB74612.1| Putative mediator of RNA polymerase II transcript... 346 7e-93
ref|XP_004235630.1| PREDICTED: mediator of RNA polymerase II tra... 345 1e-92
ref|XP_004235629.1| PREDICTED: mediator of RNA polymerase II tra... 345 1e-92
gb|ESW07605.1| hypothetical protein PHAVU_010G143300g [Phaseolus... 345 2e-92
emb|CBI36012.3| unnamed protein product [Vitis vinifera] 340 4e-91
ref|XP_006426448.1| hypothetical protein CICLE_v10026335mg [Citr... 339 1e-90
ref|XP_004252362.1| PREDICTED: mediator of RNA polymerase II tra... 338 2e-90
ref|XP_006466167.1| PREDICTED: mediator of RNA polymerase II tra... 337 3e-90
>ref|XP_002282496.1| PREDICTED: putative mediator of RNA polymerase II transcription
subunit 6 [Vitis vinifera]
Length = 258
Score = 367 bits (941), Expect = 5e-99
Identities = 191/263 (72%), Positives = 207/263 (78%), Gaps = 6/263 (2%)
Frame = +2
Query: 17 MAATPL-PPAMQGGPPQEVGNPGVVASDGMPQPPGTDMTGICFRDQLWLNTYPLDRNLVF 193
MA+TP+ PP G P GNP V P PPGTDMTGICFRDQLWLN+YPLDRNLVF
Sbjct: 1 MASTPMAPPNPAAGNPNFDGNPPAV-----PTPPGTDMTGICFRDQLWLNSYPLDRNLVF 55
Query: 194 DYFALSPFYDWSCNNEQLRSRSIHPLDLSHLSKMTGTEYALSEVMEPHLFVIRKQKRDGP 373
DYFALSPFYDW+CNNEQLR RSIHPLD SHLSKMTGTEY L+EVMEPHLFVIRKQKRDGP
Sbjct: 56 DYFALSPFYDWTCNNEQLRLRSIHPLDTSHLSKMTGTEYMLNEVMEPHLFVIRKQKRDGP 115
Query: 374 EKVTPMLTYYILDGSIYQAPQLASVFASRIGRALYHISKAFNTAASKLEKIGYADAENEE 553
EKVTPMLTYYILDGSIYQAPQL +VF +RIGRALYHISKAF TAASKLEKIGY DAENE
Sbjct: 116 EKVTPMLTYYILDGSIYQAPQLCNVFTARIGRALYHISKAFTTAASKLEKIGYVDAENEN 175
Query: 554 PNSESINGKEAIDLKELKRVDHILATLQRKLXXXXXXXXXXEGYAP---SEMEKDLEKRA 724
P ES GKE ID KE+ RVD ILA+LQRKL EGYAP +E EK E +
Sbjct: 176 PALESKVGKETIDFKEVMRVDQILASLQRKLPPAPPPPQFPEGYAPPPTAEGEKGPETQQ 235
Query: 725 SEQP--TSVDPIIDQGPAKRTKF 787
+ +P ++DPIIDQGP+KR KF
Sbjct: 236 AAEPQLPALDPIIDQGPSKRMKF 258
>emb|CAN68925.1| hypothetical protein VITISV_044247 [Vitis vinifera]
Length = 253
Score = 360 bits (925), Expect = 4e-97
Identities = 186/256 (72%), Positives = 200/256 (78%), Gaps = 5/256 (1%)
Frame = +2
Query: 35 PPAMQGGPPQEVGNPGVVASDGMPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSP 214
PP G P GNP P PPGTDMTGICFRDQLWLN+YPLDRNLVFDYFALSP
Sbjct: 3 PPNPAAGNPNFDGNPPAA-----PTPPGTDMTGICFRDQLWLNSYPLDRNLVFDYFALSP 57
Query: 215 FYDWSCNNEQLRSRSIHPLDLSHLSKMTGTEYALSEVMEPHLFVIRKQKRDGPEKVTPML 394
FYDW+CNNEQLR RSIHPLD SHLSKMTGTEY L+EVMEPHLFVIRKQKRDGPEKVTPML
Sbjct: 58 FYDWTCNNEQLRLRSIHPLDTSHLSKMTGTEYMLNEVMEPHLFVIRKQKRDGPEKVTPML 117
Query: 395 TYYILDGSIYQAPQLASVFASRIGRALYHISKAFNTAASKLEKIGYADAENEEPNSESIN 574
TYYILDGSIYQAPQL +VF +RIGRALYHISKAF TAASKLEKIGY DAENE P ES
Sbjct: 118 TYYILDGSIYQAPQLCNVFTARIGRALYHISKAFTTAASKLEKIGYVDAENENPALESKV 177
Query: 575 GKEAIDLKELKRVDHILATLQRKLXXXXXXXXXXEGYAP---SEMEKDLEKRASEQP--T 739
GKE ID KE+ RVD ILA+LQRKL EGYAP +E EK E + + +P
Sbjct: 178 GKETIDFKEVMRVDQILASLQRKLPPAPPAPQFPEGYAPPPTAEGEKGPETQQAAEPQLP 237
Query: 740 SVDPIIDQGPAKRTKF 787
++DPIIDQGP+KR KF
Sbjct: 238 ALDPIIDQGPSKRMKF 253
>ref|XP_006372643.1| RNA polymerase transcriptional regulation mediator-related family
protein [Populus trichocarpa]
gi|550319272|gb|ERP50440.1| RNA polymerase
transcriptional regulation mediator-related family
protein [Populus trichocarpa]
Length = 259
Score = 360 bits (924), Expect = 5e-97
Identities = 184/256 (71%), Positives = 199/256 (77%), Gaps = 5/256 (1%)
Frame = +2
Query: 35 PPAMQGGPPQEVGNPGVVASDGMPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSP 214
PP + P NP + QPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSP
Sbjct: 4 PPVLPQLPTNFEANPPPMGPTPPQQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSP 63
Query: 215 FYDWSCNNEQLRSRSIHPLDLSHLSKMTGTEYALSEVMEPHLFVIRKQKRDGPEKVTPML 394
FYDW+CNNEQLRS+SIHPLDLSHL KMTGTEY LSEVMEPHLFV RKQKRD EKVTPML
Sbjct: 64 FYDWTCNNEQLRSQSIHPLDLSHLLKMTGTEYMLSEVMEPHLFVFRKQKRDSAEKVTPML 123
Query: 395 TYYILDGSIYQAPQLASVFASRIGRALYHISKAFNTAASKLEKIGYADAENEEPNSESIN 574
TYY+LDGSIYQAPQL SVFA+R+GRALY+ISKAF TAASKLEKIGY D+ENE SES
Sbjct: 124 TYYVLDGSIYQAPQLCSVFAARVGRALYYISKAFGTAASKLEKIGYVDSENEGAASESKT 183
Query: 575 GKEAIDLKELKRVDHILATLQRKLXXXXXXXXXXEGYAP---SEMEKDLEKRASEQP--T 739
GKE ID KE+KR+DHILA+LQRKL EGY P +E EK E + +P
Sbjct: 184 GKEVIDFKEVKRIDHILASLQRKLPPAPPPPSFPEGYVPQPTTEEEKGPETQQGGEPQLP 243
Query: 740 SVDPIIDQGPAKRTKF 787
SVDPIIDQGPAKR KF
Sbjct: 244 SVDPIIDQGPAKRMKF 259
>ref|XP_002331927.1| predicted protein [Populus trichocarpa]
Length = 235
Score = 355 bits (911), Expect = 1e-95
Identities = 179/232 (77%), Positives = 192/232 (82%), Gaps = 5/232 (2%)
Frame = +2
Query: 107 QPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWSCNNEQLRSRSIHPLDLSHL 286
QPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDW+CNNEQLRS+SIHPLDLSHL
Sbjct: 4 QPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRSQSIHPLDLSHL 63
Query: 287 SKMTGTEYALSEVMEPHLFVIRKQKRDGPEKVTPMLTYYILDGSIYQAPQLASVFASRIG 466
KMTGTEY LSEVMEPHLFV RKQKRD EKVTPMLTYY+LDGSIYQAPQL SVFA+R+G
Sbjct: 64 LKMTGTEYMLSEVMEPHLFVFRKQKRDSAEKVTPMLTYYVLDGSIYQAPQLCSVFAARVG 123
Query: 467 RALYHISKAFNTAASKLEKIGYADAENEEPNSESINGKEAIDLKELKRVDHILATLQRKL 646
RALY+ISKAF TAASKLEKIGY D+ENE SES GKE ID KE+KR+DHILA+LQRKL
Sbjct: 124 RALYYISKAFGTAASKLEKIGYVDSENEGAASESKTGKEVIDFKEVKRIDHILASLQRKL 183
Query: 647 XXXXXXXXXXEGYAP---SEMEKDLEKRASEQP--TSVDPIIDQGPAKRTKF 787
EGY P +E EK E + +P SVDPIIDQGPAKR KF
Sbjct: 184 PPAPPPPSFPEGYVPQPTTEEEKGPETQQGGEPQLPSVDPIIDQGPAKRMKF 235
>gb|EOY26988.1| RNA polymerase transcriptional regulation mediator-related isoform
1 [Theobroma cacao]
Length = 257
Score = 355 bits (910), Expect = 2e-95
Identities = 180/250 (72%), Positives = 196/250 (78%), Gaps = 6/250 (2%)
Frame = +2
Query: 56 PPQEVGNPGVVASDGMP-QPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWSC 232
PPQ A +P QPPGTDMTGICFRDQLWLNTYPLDRNL+FDYFALSPFYDW+C
Sbjct: 8 PPQAAAAGNFEAPPPLPMQPPGTDMTGICFRDQLWLNTYPLDRNLIFDYFALSPFYDWTC 67
Query: 233 NNEQLRSRSIHPLDLSHLSKMTGTEYALSEVMEPHLFVIRKQKRDGPEKVTPMLTYYILD 412
NNEQLR SIHPLD+S LSKMTG EY LSEVMEP+LFVIRKQKRDGPEKVTPML YYILD
Sbjct: 68 NNEQLRMHSIHPLDISQLSKMTGVEYMLSEVMEPNLFVIRKQKRDGPEKVTPMLAYYILD 127
Query: 413 GSIYQAPQLASVFASRIGRALYHISKAFNTAASKLEKIGYADAENEEPNSESINGKEAID 592
GSIYQAPQL +VFA+R+GRALY+ISKAF TAASKLEKIGY D ENE ES GKE ID
Sbjct: 128 GSIYQAPQLCNVFAARVGRALYYISKAFTTAASKLEKIGYVDTENESETFESKGGKETID 187
Query: 593 LKELKRVDHILATLQRKLXXXXXXXXXXEGYAP---SEMEKDLEKR--ASEQPTSVDPII 757
KE+KRVDHILA+LQRKL EG+ P +E EKD E + QP ++DPII
Sbjct: 188 FKEVKRVDHILASLQRKLPPAPPPPPFPEGFIPLATAEAEKDPENQQAVETQPPAIDPII 247
Query: 758 DQGPAKRTKF 787
DQGPAKR KF
Sbjct: 248 DQGPAKRMKF 257
>ref|XP_006585556.1| PREDICTED: mediator of RNA polymerase II transcription subunit
6-like isoform X2 [Glycine max]
Length = 249
Score = 353 bits (905), Expect = 7e-95
Identities = 176/244 (72%), Positives = 196/244 (80%), Gaps = 5/244 (2%)
Frame = +2
Query: 71 GNPGVVASDGMPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWSCNNEQLR 250
GN + G PQPPGTDMTGICFRDQLWLN++PLDRNLVFDYFALSPFYDW+CNNEQLR
Sbjct: 6 GNQMLEGGGGAPQPPGTDMTGICFRDQLWLNSFPLDRNLVFDYFALSPFYDWTCNNEQLR 65
Query: 251 SRSIHPLDLSHLSKMTGTEYALSEVMEPHLFVIRKQKRDGPEKVTPMLTYYILDGSIYQA 430
RS+HPLD+S LSKMTGTEY LSEVMEPHLFVIRKQKRD P+KVTPML YY+LDGSIYQA
Sbjct: 66 MRSVHPLDISQLSKMTGTEYMLSEVMEPHLFVIRKQKRDSPDKVTPMLAYYVLDGSIYQA 125
Query: 431 PQLASVFASRIGRALYHISKAFNTAASKLEKIGYADAENEEPNSESINGKEAIDLKELKR 610
PQL +VFA+RIGRALY+I KAF TAASKLEKIGYAD+ENE ES KE ID+KE+KR
Sbjct: 126 PQLCNVFAARIGRALYYIQKAFTTAASKLEKIGYADSENETALLESKTAKETIDIKEVKR 185
Query: 611 VDHILATLQRKLXXXXXXXXXXEGYAP---SEMEK--DLEKRASEQPTSVDPIIDQGPAK 775
VDHILA+LQRKL EGY P +E EK + ++ A Q + DPIIDQGPAK
Sbjct: 186 VDHILASLQRKLPPAPPPPPFPEGYVPPPTAETEKGTETQEAAETQAPTADPIIDQGPAK 245
Query: 776 RTKF 787
R KF
Sbjct: 246 RMKF 249
>ref|XP_002515912.1| RNA polymerase II mediator complex subunit, putative [Ricinus
communis] gi|223544817|gb|EEF46332.1| RNA polymerase II
mediator complex subunit, putative [Ricinus communis]
Length = 251
Score = 351 bits (900), Expect = 3e-94
Identities = 182/244 (74%), Positives = 195/244 (79%), Gaps = 5/244 (2%)
Frame = +2
Query: 71 GNPGVVASDGMPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWSCNNEQLR 250
GNP A PQPPGTDMTGICFRDQLWLNTYPLDRNL+FDYFALSPFYDW+CNNEQLR
Sbjct: 12 GNPLAPAP---PQPPGTDMTGICFRDQLWLNTYPLDRNLIFDYFALSPFYDWTCNNEQLR 68
Query: 251 SRSIHPLDLSHLSKMTGTEYALSEVMEPHLFVIRKQKRDGPEKVTPMLTYYILDGSIYQA 430
+SIHPLDLSHLSKMTGTEY L+EV+EP+LFVIRKQKRD PEKVTPMLTYY+LDGSIYQA
Sbjct: 69 LQSIHPLDLSHLSKMTGTEYMLNEVIEPNLFVIRKQKRDSPEKVTPMLTYYVLDGSIYQA 128
Query: 431 PQLASVFASRIGRALYHISKAFNTAASKLEKIGYADAENEEPNSESINGKEAIDLKELKR 610
PQL +VFA+RIGRALYHISKAF TAASKLEKIGY D E E SES GKE ID KE+KR
Sbjct: 129 PQLCNVFAARIGRALYHISKAFTTAASKLEKIGYVD-EGEGVASESKVGKEVIDFKEVKR 187
Query: 611 VDHILATLQRKLXXXXXXXXXXEGYAPS---EMEKDLEKR--ASEQPTSVDPIIDQGPAK 775
+DHILA++QRKL EGY P E EK E R QP VDPIIDQGPAK
Sbjct: 188 IDHILASIQRKLPPAPPPPPFPEGYVPPATVEAEKGSETRQAVETQPPPVDPIIDQGPAK 247
Query: 776 RTKF 787
R KF
Sbjct: 248 RMKF 251
>gb|EMJ18951.1| hypothetical protein PRUPE_ppa010369mg [Prunus persica]
Length = 252
Score = 350 bits (899), Expect = 4e-94
Identities = 180/263 (68%), Positives = 202/263 (76%), Gaps = 6/263 (2%)
Frame = +2
Query: 17 MAATPL-PPAMQGGPPQEVGNPGVVASDGMPQPPGTDMTGICFRDQLWLNTYPLDRNLVF 193
MA P+ PP+M+G PP P V QPPGTDMTGICF+DQLWLN+YPLDRNLVF
Sbjct: 1 MATPPMAPPSMEGTPP-----PMAV------QPPGTDMTGICFKDQLWLNSYPLDRNLVF 49
Query: 194 DYFALSPFYDWSCNNEQLRSRSIHPLDLSHLSKMTGTEYALSEVMEPHLFVIRKQKRDGP 373
DYFA+SPFYDW+CNNEQLR RSIHPLD SHLSKMTGTEY+L+EVMEPHLFV RKQKRDGP
Sbjct: 50 DYFAISPFYDWTCNNEQLRQRSIHPLDPSHLSKMTGTEYSLNEVMEPHLFVFRKQKRDGP 109
Query: 374 EKVTPMLTYYILDGSIYQAPQLASVFASRIGRALYHISKAFNTAASKLEKIGYADAENEE 553
EKVTPMLTYY+LDG+IYQAPQL +VFA+RIGRALY+ISKAF TAASKLEKIGY D+ENE
Sbjct: 110 EKVTPMLTYYVLDGTIYQAPQLCNVFAARIGRALYYISKAFTTAASKLEKIGYVDSENET 169
Query: 554 PNSESINGKEAIDLKELKRVDHILATLQRKLXXXXXXXXXXEGYAP-----SEMEKDLEK 718
ES KE ID KE+KRVDHIL +LQRKL EGY P +E + ++
Sbjct: 170 AAFESKVTKETIDFKEVKRVDHILQSLQRKLPPAPPPPPFPEGYVPAPTAEAENGPETQQ 229
Query: 719 RASEQPTSVDPIIDQGPAKRTKF 787
Q +DPIIDQGPAKR KF
Sbjct: 230 AGEPQQPQMDPIIDQGPAKRMKF 252
>ref|XP_006343025.1| PREDICTED: mediator of RNA polymerase II transcription subunit
6-like [Solanum tuberosum]
Length = 247
Score = 350 bits (897), Expect = 6e-94
Identities = 178/258 (68%), Positives = 198/258 (76%), Gaps = 2/258 (0%)
Frame = +2
Query: 17 MAATPL-PPAMQGGPPQEVGNPGVVASDGMPQPPGTDMTGICFRDQLWLNTYPLDRNLVF 193
MA+TP+ PP G P P PGTDMT ICFRDQLWLNTYPLDRNLVF
Sbjct: 1 MASTPMMPPNADGSAP------------AAPPLPGTDMTSICFRDQLWLNTYPLDRNLVF 48
Query: 194 DYFALSPFYDWSCNNEQLRSRSIHPLDLSHLSKMTGTEYALSEVMEPHLFVIRKQKRDGP 373
DYFALSPFYDW+CNNEQLR+R+IHPLD SH+SKMTG EY LSEVMEP+LFVIRKQKRD P
Sbjct: 49 DYFALSPFYDWTCNNEQLRARAIHPLDFSHISKMTGMEYTLSEVMEPNLFVIRKQKRDSP 108
Query: 374 EKVTPMLTYYILDGSIYQAPQLASVFASRIGRALYHISKAFNTAASKLEKIGYADAENEE 553
EKVTPMLTYYILDGSIYQAPQL +VFA+R+GRALYHISKAF TA+SKLEKIGY ++EN+
Sbjct: 109 EKVTPMLTYYILDGSIYQAPQLCNVFAARLGRALYHISKAFGTASSKLEKIGYVESENDS 168
Query: 554 PNSESINGKEAIDLKELKRVDHILATLQRKLXXXXXXXXXXEGYAPSEMEKDLEKRASE- 730
SE+ KEAID KELKRVDHILA+LQRKL EGYAP + E + E
Sbjct: 169 QASETKPAKEAIDFKELKRVDHILASLQRKLPPVPPPPPFPEGYAPPSTSEPSENQQPET 228
Query: 731 QPTSVDPIIDQGPAKRTK 784
QP +DPIIDQGP+KR K
Sbjct: 229 QPPPIDPIIDQGPSKRMK 246
>gb|EEC80233.1| hypothetical protein OsI_22170 [Oryza sativa Indica Group]
Length = 258
Score = 349 bits (895), Expect = 1e-93
Identities = 179/262 (68%), Positives = 197/262 (75%), Gaps = 5/262 (1%)
Frame = +2
Query: 17 MAATPLPPAMQGGPPQEVGNPGVVASDG---MPQPPGTDMTGICFRDQLWLNTYPLDRNL 187
M+ TPLPP Q PP PG DG +P PPGTDMTGICFRDQLWLNTYPLDRNL
Sbjct: 1 MSGTPLPPPAQPPPP-----PGAAGPDGAAALPPPPGTDMTGICFRDQLWLNTYPLDRNL 55
Query: 188 VFDYFALSPFYDWSCNNEQLRSRSIHPLDLSHLSKMTGTEYALSEVMEPHLFVIRKQKRD 367
VFDYFALSPFYD +CNNE LRSR IHPLD+SHL+KMTG EY LS+VMEPHLFVIRKQ+R+
Sbjct: 56 VFDYFALSPFYDLTCNNESLRSRQIHPLDMSHLTKMTGMEYVLSDVMEPHLFVIRKQRRE 115
Query: 368 GPEKVTPMLTYYILDGSIYQAPQLASVFASRIGRALYHISKAFNTAASKLEKIGYADAEN 547
PEK ML YYILDGSIYQAPQL SVFASRI RA++HISKAF TA SKLEKIG+ + E
Sbjct: 116 SPEKSNAMLAYYILDGSIYQAPQLCSVFASRISRAMHHISKAFTTACSKLEKIGHVETEP 175
Query: 548 EEPNSESINGKEAIDLKELKRVDHILATLQRKLXXXXXXXXXXEGYAPSEMEKDLEKRAS 727
+ SES KEAIDLKELKRVDHIL +LQRKL EGY PSE EK + +
Sbjct: 176 DTAASESKTQKEAIDLKELKRVDHILMSLQRKLQPAPPPPPFPEGYVPSEQEKASDDLLA 235
Query: 728 EQ--PTSVDPIIDQGPAKRTKF 787
+ P VDPIIDQGPAKR +F
Sbjct: 236 SEALPPQVDPIIDQGPAKRPRF 257
>ref|XP_004149176.1| PREDICTED: LOW QUALITY PROTEIN: mediator of RNA polymerase II
transcription subunit 6-like [Cucumis sativus]
Length = 260
Score = 347 bits (891), Expect = 3e-93
Identities = 186/262 (70%), Positives = 199/262 (75%), Gaps = 7/262 (2%)
Frame = +2
Query: 23 ATPLPPAMQGGPPQEVGNPGVVASDGMPQPPGTDMT---GICFRDQLWLNTYPLDRNLVF 193
ATP PP G G P A PQPPGTDMT GICFRDQLWLNTYPLDRNLVF
Sbjct: 2 ATPPPPTAPPGTGNFEGGPLPAA----PQPPGTDMTNLPGICFRDQLWLNTYPLDRNLVF 57
Query: 194 DYFALSPFYDWSCNNEQLRSRSIHPLDLSHLSKMTGTEYALSEVMEPHLFVIRKQKRDGP 373
DYFALSPFYDW+CNNEQLR RSIHPLDLS LSKMTG EY L+EVMEPHLFV RKQKRDGP
Sbjct: 58 DYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVMEPHLFVFRKQKRDGP 117
Query: 374 EKVTPMLTYYILDGSIYQAPQLASVFASRIGRALYHISKAFNTAASKLEKIGYADAENEE 553
EKVTPMLTYYILDGSIYQAPQL SVFA+R+ RALY+ISKAF TA+SKLEKIGY D+ENE
Sbjct: 118 EKVTPMLTYYILDGSIYQAPQLCSVFAARVSRALYYISKAFTTASSKLEKIGYVDSENE- 176
Query: 554 PNSESINGKEAIDLKELKRVDHILATLQRKLXXXXXXXXXXEGYAP---SEMEKDLEKRA 724
+ E KE I+ KE+KRVDHILA+LQRKL EGYAP +E EK E +
Sbjct: 177 -SEEVKPAKETINFKEVKRVDHILASLQRKLPPAPPPPPFPEGYAPAATAETEKGPENQQ 235
Query: 725 SE-QPTSVDPIIDQGPAKRTKF 787
E Q S DPIIDQGPAKR KF
Sbjct: 236 GESQQPSADPIIDQGPAKRMKF 257
>ref|XP_003531638.1| PREDICTED: mediator of RNA polymerase II transcription subunit
6-like isoform X1 [Glycine max]
Length = 252
Score = 347 bits (891), Expect = 3e-93
Identities = 176/247 (71%), Positives = 196/247 (79%), Gaps = 8/247 (3%)
Frame = +2
Query: 71 GNPGVVASDGMPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWSCNNEQLR 250
GN + G PQPPGTDMTGICFRDQLWLN++PLDRNLVFDYFALSPFYDW+CNNEQLR
Sbjct: 6 GNQMLEGGGGAPQPPGTDMTGICFRDQLWLNSFPLDRNLVFDYFALSPFYDWTCNNEQLR 65
Query: 251 SRSIHPLDLSHLSKMTGTEYALSEVMEPHLFVIRKQKRDGPEKVTPMLTYYILDGSIYQA 430
RS+HPLD+S LSKMTGTEY LSEVMEPHLFVIRKQKRD P+KVTPML YY+LDGSIYQA
Sbjct: 66 MRSVHPLDISQLSKMTGTEYMLSEVMEPHLFVIRKQKRDSPDKVTPMLAYYVLDGSIYQA 125
Query: 431 PQLASVFASRIGRALYHISKAFNTAASKLEKIGY---ADAENEEPNSESINGKEAIDLKE 601
PQL +VFA+RIGRALY+I KAF TAASKLEKIGY AD+ENE ES KE ID+KE
Sbjct: 126 PQLCNVFAARIGRALYYIQKAFTTAASKLEKIGYAGSADSENETALLESKTAKETIDIKE 185
Query: 602 LKRVDHILATLQRKLXXXXXXXXXXEGYAP---SEMEK--DLEKRASEQPTSVDPIIDQG 766
+KRVDHILA+LQRKL EGY P +E EK + ++ A Q + DPIIDQG
Sbjct: 186 VKRVDHILASLQRKLPPAPPPPPFPEGYVPPPTAETEKGTETQEAAETQAPTADPIIDQG 245
Query: 767 PAKRTKF 787
PAKR KF
Sbjct: 246 PAKRMKF 252
>gb|EXB74612.1| Putative mediator of RNA polymerase II transcription subunit 6
[Morus notabilis]
Length = 251
Score = 346 bits (888), Expect = 7e-93
Identities = 175/263 (66%), Positives = 198/263 (75%), Gaps = 6/263 (2%)
Frame = +2
Query: 17 MAATPL-PPAMQGGPPQEVGNPGVVASDGMPQPPGTDMTGICFRDQLWLNTYPLDRNLVF 193
MA P+ P M+G PP P PPGTDMTGICFRDQLWLN++PLDRNLVF
Sbjct: 1 MATPPVGAPGMEGRPPAP------------PPPPGTDMTGICFRDQLWLNSFPLDRNLVF 48
Query: 194 DYFALSPFYDWSCNNEQLRSRSIHPLDLSHLSKMTGTEYALSEVMEPHLFVIRKQKRDGP 373
DYFALSPFYDW+CNNEQLR RSIHPLDL+HLSKMTGTEY L+EV+EP+LFVIRKQKRDGP
Sbjct: 49 DYFALSPFYDWTCNNEQLRMRSIHPLDLTHLSKMTGTEYMLNEVLEPNLFVIRKQKRDGP 108
Query: 374 EKVTPMLTYYILDGSIYQAPQLASVFASRIGRALYHISKAFNTAASKLEKIGYADAENEE 553
EKVTPMLTYY+LDGSIYQAPQL +VFA+R GRALY++ KAF AASKLEKIGY D+ENE
Sbjct: 109 EKVTPMLTYYVLDGSIYQAPQLCNVFAARAGRALYYLQKAFTNAASKLEKIGYVDSENEN 168
Query: 554 PNSESINGKEAIDLKELKRVDHILATLQRKLXXXXXXXXXXEGYAP-----SEMEKDLEK 718
+S GKE ID KE+KR+DHILA+LQRKL EGY P SE + ++
Sbjct: 169 APLDSKIGKETIDFKEMKRIDHILASLQRKLPPAPPPPPFPEGYVPPQNADSEKGPEAQQ 228
Query: 719 RASEQPTSVDPIIDQGPAKRTKF 787
Q VDPIIDQGPAKR +F
Sbjct: 229 AGEAQQAPVDPIIDQGPAKRMRF 251
>ref|XP_004235630.1| PREDICTED: mediator of RNA polymerase II transcription subunit
6-like isoform 2 [Solanum lycopersicum]
Length = 247
Score = 345 bits (886), Expect = 1e-92
Identities = 175/257 (68%), Positives = 197/257 (76%), Gaps = 1/257 (0%)
Frame = +2
Query: 17 MAATPLPPAMQGGPPQEVGNPGVVASDGMPQPPGTDMTGICFRDQLWLNTYPLDRNLVFD 196
MA+TP+ P G ++ P PGTDMT ICFRDQLWLNTYPLD+NLVFD
Sbjct: 1 MASTPMMPLNADG-----------SAPVAPPLPGTDMTSICFRDQLWLNTYPLDKNLVFD 49
Query: 197 YFALSPFYDWSCNNEQLRSRSIHPLDLSHLSKMTGTEYALSEVMEPHLFVIRKQKRDGPE 376
YFALSPFYDW+CNNEQLR+R+IHPLD SH+SKMTG EY LSEVMEP+LFVIRKQKRD PE
Sbjct: 50 YFALSPFYDWTCNNEQLRARAIHPLDFSHISKMTGMEYTLSEVMEPNLFVIRKQKRDSPE 109
Query: 377 KVTPMLTYYILDGSIYQAPQLASVFASRIGRALYHISKAFNTAASKLEKIGYADAENEEP 556
KVTPMLTYYILDGSIYQAPQL +VFA+R+GRALYHISKAF TA+SKLEKIGY ++EN
Sbjct: 110 KVTPMLTYYILDGSIYQAPQLCNVFAARLGRALYHISKAFGTASSKLEKIGYVESENNSQ 169
Query: 557 NSESINGKEAIDLKELKRVDHILATLQRKLXXXXXXXXXXEGYAPSEMEKDLEKRASE-Q 733
SE+ KEAID KELKRVDHILA+LQRKL EGYAP + E + E Q
Sbjct: 170 ASETKPAKEAIDFKELKRVDHILASLQRKLPAVPLPPPLPEGYAPPSTSEPSENQQPETQ 229
Query: 734 PTSVDPIIDQGPAKRTK 784
P +DPIIDQGP+KR K
Sbjct: 230 PPPIDPIIDQGPSKRMK 246
>ref|XP_004235629.1| PREDICTED: mediator of RNA polymerase II transcription subunit
6-like isoform 1 [Solanum lycopersicum]
Length = 248
Score = 345 bits (886), Expect = 1e-92
Identities = 175/257 (68%), Positives = 197/257 (76%), Gaps = 1/257 (0%)
Frame = +2
Query: 17 MAATPLPPAMQGGPPQEVGNPGVVASDGMPQPPGTDMTGICFRDQLWLNTYPLDRNLVFD 196
MA+TP+ P G ++ P PGTDMT ICFRDQLWLNTYPLD+NLVFD
Sbjct: 1 MASTPMMPLNADG-----------SAPVAPPLPGTDMTSICFRDQLWLNTYPLDKNLVFD 49
Query: 197 YFALSPFYDWSCNNEQLRSRSIHPLDLSHLSKMTGTEYALSEVMEPHLFVIRKQKRDGPE 376
YFALSPFYDW+CNNEQLR+R+IHPLD SH+SKMTG EY LSEVMEP+LFVIRKQKRD PE
Sbjct: 50 YFALSPFYDWTCNNEQLRARAIHPLDFSHISKMTGMEYTLSEVMEPNLFVIRKQKRDSPE 109
Query: 377 KVTPMLTYYILDGSIYQAPQLASVFASRIGRALYHISKAFNTAASKLEKIGYADAENEEP 556
KVTPMLTYYILDGSIYQAPQL +VFA+R+GRALYHISKAF TA+SKLEKIGY ++EN
Sbjct: 110 KVTPMLTYYILDGSIYQAPQLCNVFAARLGRALYHISKAFGTASSKLEKIGYVESENNSQ 169
Query: 557 NSESINGKEAIDLKELKRVDHILATLQRKLXXXXXXXXXXEGYAPSEMEKDLEKRASE-Q 733
SE+ KEAID KELKRVDHILA+LQRKL EGYAP + E + E Q
Sbjct: 170 ASETKPAKEAIDFKELKRVDHILASLQRKLPAVPLPPPLPEGYAPPSTSEPSENQQPETQ 229
Query: 734 PTSVDPIIDQGPAKRTK 784
P +DPIIDQGP+KR K
Sbjct: 230 PPPIDPIIDQGPSKRMK 246
>gb|ESW07605.1| hypothetical protein PHAVU_010G143300g [Phaseolus vulgaris]
Length = 247
Score = 345 bits (885), Expect = 2e-92
Identities = 175/243 (72%), Positives = 194/243 (79%), Gaps = 6/243 (2%)
Frame = +2
Query: 77 PGVVASDGMPQP-PGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWSCNNEQLRS 253
PG +G P P PGTDMTGICFRDQLWLN++PLDRNLVFDYFALSPFYDW+CNNEQLR
Sbjct: 5 PGNQMMEGGPPPLPGTDMTGICFRDQLWLNSFPLDRNLVFDYFALSPFYDWTCNNEQLRM 64
Query: 254 RSIHPLDLSHLSKMTGTEYALSEVMEPHLFVIRKQKRDGPEKVTPMLTYYILDGSIYQAP 433
RS+HPLDLS LSKMTGTEY LSEVMEPHLFVIRKQKRD P+KVTPML YY+LDGSIYQAP
Sbjct: 65 RSVHPLDLSQLSKMTGTEYMLSEVMEPHLFVIRKQKRDSPDKVTPMLAYYVLDGSIYQAP 124
Query: 434 QLASVFASRIGRALYHISKAFNTAASKLEKIGYADAENEEPNSESINGKEAIDLKELKRV 613
QL +VFA+RIGRALY+I KAF TAASKLEKIGY D+ENE ES KE ID+KE+KRV
Sbjct: 125 QLCNVFAARIGRALYYIQKAFTTAASKLEKIGYVDSENETALVESKTAKETIDIKEVKRV 184
Query: 614 DHILATLQRKLXXXXXXXXXXEGYAP---SEMEK--DLEKRASEQPTSVDPIIDQGPAKR 778
DHILA+LQRKL EGY P +E EK + ++ A Q + DPIIDQGPAKR
Sbjct: 185 DHILASLQRKLPPAPPPPPFPEGYVPPPTAEAEKGTETQEAAETQAPTADPIIDQGPAKR 244
Query: 779 TKF 787
KF
Sbjct: 245 MKF 247
>emb|CBI36012.3| unnamed protein product [Vitis vinifera]
Length = 226
Score = 340 bits (873), Expect = 4e-91
Identities = 173/226 (76%), Positives = 187/226 (82%), Gaps = 5/226 (2%)
Frame = +2
Query: 125 MTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWSCNNEQLRSRSIHPLDLSHLSKMTGT 304
MTGICFRDQLWLN+YPLDRNLVFDYFALSPFYDW+CNNEQLR RSIHPLD SHLSKMTGT
Sbjct: 1 MTGICFRDQLWLNSYPLDRNLVFDYFALSPFYDWTCNNEQLRLRSIHPLDTSHLSKMTGT 60
Query: 305 EYALSEVMEPHLFVIRKQKRDGPEKVTPMLTYYILDGSIYQAPQLASVFASRIGRALYHI 484
EY L+EVMEPHLFVIRKQKRDGPEKVTPMLTYYILDGSIYQAPQL +VF +RIGRALYHI
Sbjct: 61 EYMLNEVMEPHLFVIRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFTARIGRALYHI 120
Query: 485 SKAFNTAASKLEKIGYADAENEEPNSESINGKEAIDLKELKRVDHILATLQRKLXXXXXX 664
SKAF TAASKLEKIGY DAENE P ES GKE ID KE+ RVD ILA+LQRKL
Sbjct: 121 SKAFTTAASKLEKIGYVDAENENPALESKVGKETIDFKEVMRVDQILASLQRKLPPAPPP 180
Query: 665 XXXXEGYAP---SEMEKDLEKRASEQP--TSVDPIIDQGPAKRTKF 787
EGYAP +E EK E + + +P ++DPIIDQGP+KR KF
Sbjct: 181 PQFPEGYAPPPTAEGEKGPETQQAAEPQLPALDPIIDQGPSKRMKF 226
>ref|XP_006426448.1| hypothetical protein CICLE_v10026335mg [Citrus clementina]
gi|557528438|gb|ESR39688.1| hypothetical protein
CICLE_v10026335mg [Citrus clementina]
Length = 251
Score = 339 bits (869), Expect = 1e-90
Identities = 180/261 (68%), Positives = 198/261 (75%), Gaps = 7/261 (2%)
Frame = +2
Query: 23 ATPLPPA-MQGGPPQEVGNPGVVASDGMPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDY 199
ATP P A ++G PP P PPGTDMTGICFRDQLWLNTYPLDRN++FDY
Sbjct: 2 ATPPPGANLEGAPP------------AAPPPPGTDMTGICFRDQLWLNTYPLDRNMIFDY 49
Query: 200 FALSPFYDWSCNNEQLRSRSIHPLDLSHLSKMTGTEYALSEVMEPHLFVIRKQKRDGPEK 379
F LS FYD +CNNEQLR RSIHPLD+S LSKMTG EY LSEVMEPHLFVIRKQKRDGPEK
Sbjct: 50 FTLSLFYDRTCNNEQLRMRSIHPLDISQLSKMTGIEYMLSEVMEPHLFVIRKQKRDGPEK 109
Query: 380 VTPMLTYYILDGSIYQAPQLASVFASRIGRALYHISKAFNTAASKLEKIGYADAENEEPN 559
VTPMLTYY+LDGSIYQAPQL +VF++RIGRAL++I KAF TAASKLEKIGY DAEN+
Sbjct: 110 VTPMLTYYVLDGSIYQAPQLCNVFSARIGRALHYIQKAFTTAASKLEKIGYVDAENDGGT 169
Query: 560 S-ESINGKEAIDLKELKRVDHILATLQRKLXXXXXXXXXXEGYAP---SEMEKDLE--KR 721
S GKE IDLKE+KRVD ILA+LQRKL EGYAP E EKD E +
Sbjct: 170 PLHSKAGKETIDLKEVKRVDQILASLQRKLPPAPPPPPFPEGYAPPQTEEAEKDPETQQT 229
Query: 722 ASEQPTSVDPIIDQGPAKRTK 784
A QP ++DPIIDQGPAKR K
Sbjct: 230 AEPQPPAIDPIIDQGPAKRVK 250
>ref|XP_004252362.1| PREDICTED: mediator of RNA polymerase II transcription subunit
6-like isoform 1 [Solanum lycopersicum]
Length = 251
Score = 338 bits (866), Expect = 2e-90
Identities = 170/229 (74%), Positives = 183/229 (79%), Gaps = 1/229 (0%)
Frame = +2
Query: 101 MPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWSCNNEQLRSRSIHPLDLS 280
+P PGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDW+CNNEQLRSRSIHPLD S
Sbjct: 22 LPPQPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRSRSIHPLDTS 81
Query: 281 HLSKMTGTEYALSEVMEPHLFVIRKQKRDGPEKVTPMLTYYILDGSIYQAPQLASVFASR 460
HLSKMTG+EY LSEVMEP+LFVIRKQKRDGPEKVTPMLTYYILDGSIYQAPQL +VFA R
Sbjct: 82 HLSKMTGSEYMLSEVMEPNLFVIRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAGR 141
Query: 461 IGRALYHISKAFNTAASKLEKIGYADAENEEPNSESINGKEAIDLKELKRVDHILATLQR 640
+GRALYHISKAF+ A+SKLEK GY +ENE SE KE ID KELKRVDHI A+LQR
Sbjct: 142 LGRALYHISKAFSFASSKLEKTGYVASENESAASEPKAAKETIDFKELKRVDHIFASLQR 201
Query: 641 KLXXXXXXXXXXEGYA-PSEMEKDLEKRASEQPTSVDPIIDQGPAKRTK 784
L EGY PS E ++ Q VDPIIDQGP+KR K
Sbjct: 202 TLPPVPPPPPFPEGYVPPSTAEASENEQEETQLPPVDPIIDQGPSKRMK 250
>ref|XP_006466167.1| PREDICTED: mediator of RNA polymerase II transcription subunit
6-like [Citrus sinensis]
Length = 251
Score = 337 bits (865), Expect = 3e-90
Identities = 178/262 (67%), Positives = 196/262 (74%), Gaps = 6/262 (2%)
Frame = +2
Query: 17 MAATPLPPAMQGGPPQEVGNPGVVASDGMPQPPGTDMTGICFRDQLWLNTYPLDRNLVFD 196
MA P ++G PP P PPGTDMTGICFRDQLWLNTYPLDRN++FD
Sbjct: 1 MATPPPGTNLEGAPP------------AAPPPPGTDMTGICFRDQLWLNTYPLDRNMIFD 48
Query: 197 YFALSPFYDWSCNNEQLRSRSIHPLDLSHLSKMTGTEYALSEVMEPHLFVIRKQKRDGPE 376
YF LS FYD +CNNEQLR RSIHPLD+S LSKMTG EY LSEVMEPHLFVIRKQKRDGPE
Sbjct: 49 YFTLSLFYDRTCNNEQLRMRSIHPLDISQLSKMTGIEYMLSEVMEPHLFVIRKQKRDGPE 108
Query: 377 KVTPMLTYYILDGSIYQAPQLASVFASRIGRALYHISKAFNTAASKLEKIGYADAENEEP 556
KVTPMLTYY+LDGSIYQAPQL +VF++RIGRAL++I KAF TAASKLEKIGY DAEN+
Sbjct: 109 KVTPMLTYYVLDGSIYQAPQLCNVFSARIGRALHYIQKAFTTAASKLEKIGYVDAENDGG 168
Query: 557 NS-ESINGKEAIDLKELKRVDHILATLQRKLXXXXXXXXXXEGYAP---SEMEKDLE--K 718
S GKE IDLKE+KRVD ILA+LQRKL EGYAP E EKD E +
Sbjct: 169 TPLHSKAGKETIDLKEVKRVDQILASLQRKLPPAPPPPPFPEGYAPPQTEEAEKDPETQQ 228
Query: 719 RASEQPTSVDPIIDQGPAKRTK 784
A QP ++DPIIDQGPAKR K
Sbjct: 229 TAEPQPPAIDPIIDQGPAKRMK 250