BLASTX nr result
ID: Zingiber25_contig00025440
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00025440
(994 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY03600.1| Pentatricopeptide repeat superfamily protein, put... 298 2e-78
ref|XP_006482700.1| PREDICTED: pentatricopeptide repeat-containi... 297 4e-78
gb|EMJ16149.1| hypothetical protein PRUPE_ppa003127mg [Prunus pe... 297 4e-78
ref|XP_006431232.1| hypothetical protein CICLE_v10011344mg [Citr... 294 4e-77
emb|CBI22283.3| unnamed protein product [Vitis vinifera] 294 4e-77
ref|XP_002279015.1| PREDICTED: pentatricopeptide repeat-containi... 294 4e-77
gb|EXB77627.1| hypothetical protein L484_018143 [Morus notabilis] 291 3e-76
ref|XP_002323888.2| hypothetical protein POPTR_0017s12620g [Popu... 291 3e-76
ref|XP_004141597.1| PREDICTED: pentatricopeptide repeat-containi... 290 6e-76
ref|XP_004985231.1| PREDICTED: pentatricopeptide repeat-containi... 289 1e-75
ref|NP_001168260.1| uncharacterized protein LOC100382024 [Zea ma... 288 3e-75
ref|XP_004169658.1| PREDICTED: pentatricopeptide repeat-containi... 286 1e-74
ref|XP_006649617.1| PREDICTED: pentatricopeptide repeat-containi... 285 2e-74
ref|XP_004304183.1| PREDICTED: pentatricopeptide repeat-containi... 284 4e-74
ref|XP_002468297.1| hypothetical protein SORBIDRAFT_01g043190 [S... 284 4e-74
gb|ABF94602.1| expressed protein [Oryza sativa Japonica Group] g... 283 1e-73
ref|XP_006338389.1| PREDICTED: pentatricopeptide repeat-containi... 282 1e-73
ref|XP_003558514.1| PREDICTED: pentatricopeptide repeat-containi... 279 1e-72
ref|XP_004232179.1| PREDICTED: pentatricopeptide repeat-containi... 277 4e-72
ref|NP_189575.2| pentatricopeptide repeat-containing protein EMB... 268 3e-69
>gb|EOY03600.1| Pentatricopeptide repeat superfamily protein, putative isoform 1
[Theobroma cacao] gi|508711704|gb|EOY03601.1|
Pentatricopeptide repeat superfamily protein, putative
isoform 1 [Theobroma cacao]
Length = 619
Score = 298 bits (764), Expect = 2e-78
Identities = 142/216 (65%), Positives = 174/216 (80%)
Frame = +2
Query: 5 NSLINCLGKAGKAELAFKVYDMLNSVGHRPDGYTWNALLCALYKSNRHADAIKLFEGIRQ 184
N+LIN LGKAG+ LAFK+YD++ S+GH PD +TWN+LL ALY++N++ADA+ LFE IR+
Sbjct: 393 NALINSLGKAGEVRLAFKIYDIMKSLGHTPDAFTWNSLLGALYRANQYADALHLFERIRK 452
Query: 185 EQDFGLNVHLYNTTLMSCQKLGLWDRSLQILWEMENCGIEMSTVSYNHAIYACEVARKPK 364
+ NVHLYNT LMSCQKLGLWDR+LQ+LW+ME G+ +ST SYN I ACE ARKPK
Sbjct: 453 QSSLA-NVHLYNTALMSCQKLGLWDRALQLLWQMEASGLLVSTASYNLVISACETARKPK 511
Query: 365 VALQVYWHMIEQKHTPDIFTYLSLIRSCIWGSLWNDLEEIMESVSPNSSIYNALVHGLCL 544
VALQVY HMI QK PD FT+LSLIRSCIWGSLW ++EEI+ V N S+YNA++HG+CL
Sbjct: 512 VALQVYDHMIHQKCVPDTFTHLSLIRSCIWGSLWAEVEEILNRVPENVSLYNAVIHGMCL 571
Query: 545 RGKISVAIKLYKKMRSIGLKPDGKTRALMLQHLPND 652
+GK+ A KLY +MR GLKPDGKTRALMLQ+L D
Sbjct: 572 KGKVESAKKLYMRMRKNGLKPDGKTRALMLQNLRKD 607
Score = 72.0 bits (175), Expect = 3e-10
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 7/212 (3%)
Frame = +2
Query: 5 NSLINCLGKAGKAELAFKVYDMLNSVGHRPDGYTWNALLCALYKSNRHADAIKLFEGIRQ 184
NSL++CL + G + A + ++ + + G+T++ +L A+ + A+ +F + +
Sbjct: 216 NSLLSCLLRNGLVDDALRTFEFMKA-NELITGHTYSLILKAIADTQGCDAALDMFAELER 274
Query: 185 --EQDFGLNVHLYNTTLMSCQKLGLWDRSLQILWEMENCGIEMSTVSYNHAIYACEVARK 358
EQ G +V +YNT L C + W + ++ + G + V+Y+ + +
Sbjct: 275 DYEQKKGFDVIVYNTALSICGRWNNWVETERVWRRILENGYSGTQVTYSLLVSIFVRCNQ 334
Query: 359 PKVALQVYWHMIEQKHTPDIFTYLSLIRSCIWGSLWNDLEEIMESV-----SPNSSIYNA 523
++AL Y MI P T ++I +C W+ I + + PN NA
Sbjct: 335 NELALDAYDEMIRNGLEPRDDTMHAVISACTKEEKWDLALSIFQKILNDGLKPNPVACNA 394
Query: 524 LVHGLCLRGKISVAIKLYKKMRSIGLKPDGKT 619
L++ L G++ +A K+Y M+S+G PD T
Sbjct: 395 LINSLGKAGEVRLAFKIYDIMKSLGHTPDAFT 426
>ref|XP_006482700.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29290-like
[Citrus sinensis]
Length = 592
Score = 297 bits (761), Expect = 4e-78
Identities = 140/213 (65%), Positives = 175/213 (82%)
Frame = +2
Query: 5 NSLINCLGKAGKAELAFKVYDMLNSVGHRPDGYTWNALLCALYKSNRHADAIKLFEGIRQ 184
N+LIN LGKAG+ +LAFKV+ ++ +GH PD YTWN LL ALYK+N+HADA++LFE I+
Sbjct: 377 NALINSLGKAGEVKLAFKVHGIIKILGHTPDVYTWNGLLTALYKANQHADALQLFESIKT 436
Query: 185 EQDFGLNVHLYNTTLMSCQKLGLWDRSLQILWEMENCGIEMSTVSYNHAIYACEVARKPK 364
EQ LNVHLYNT LM+CQKLGLW++SLQ+LW+ME + +ST SYN I+ACE+ARKPK
Sbjct: 437 EQSSELNVHLYNTALMACQKLGLWEKSLQLLWQMETSELPVSTSSYNIVIHACEIARKPK 496
Query: 365 VALQVYWHMIEQKHTPDIFTYLSLIRSCIWGSLWNDLEEIMESVSPNSSIYNALVHGLCL 544
+ALQVY HM+ +K TPD TYLSLIR CIWGSLW ++EEI+E V+P+ S+YNA++ G+CL
Sbjct: 497 IALQVYEHMVHRKCTPDTLTYLSLIRGCIWGSLWAEVEEILE-VAPDVSLYNAVIQGMCL 555
Query: 545 RGKISVAIKLYKKMRSIGLKPDGKTRALMLQHL 643
RGK A KLY +MR IGLKPDGKTRALMLQ+L
Sbjct: 556 RGKFESAKKLYTRMREIGLKPDGKTRALMLQNL 588
Score = 68.9 bits (167), Expect = 3e-09
Identities = 51/211 (24%), Positives = 105/211 (49%), Gaps = 9/211 (4%)
Frame = +2
Query: 5 NSLINCLGKAGKAELAFKVYDMLNSVGHRPDGYTWNALLCALYKSNRHADAIKLFEGI-- 178
NSL++CL + G + A +V++ + + G++++ +L A+ + A+ +F G
Sbjct: 200 NSLLSCLIRNGLLDYALRVFEFMRT-NEITMGHSYSLILKAVEHAQGFDSALDMFVGFGG 258
Query: 179 --RQEQDFGLNVHLYNTTLMSCQKLGLWDRSLQILWEMENCGIEMSTVSYNHAIYACEVA 352
RQ++DF +V +YNT + C ++ W + ++ M+ G+ + V+Y+ +
Sbjct: 259 YSRQKKDF--DVIVYNTMISVCGRVNNWIETEKLWRSMKEDGLIGTRVTYSLLVCIFARC 316
Query: 353 RKPKVALQVYWHMIEQKHTPDIFTYLSLIRSCIWGSLWNDLEEIMES-----VSPNSSIY 517
+ ++AL Y MI+ P ++I SC W+ + E+ + PN
Sbjct: 317 SQNELALDAYNEMIQNGLEPGDDVTQAVIGSCTREGKWDLALNLFENMLNGRLKPNLISC 376
Query: 518 NALVHGLCLRGKISVAIKLYKKMRSIGLKPD 610
NAL++ L G++ +A K++ ++ +G PD
Sbjct: 377 NALINSLGKAGEVKLAFKVHGIIKILGHTPD 407
>gb|EMJ16149.1| hypothetical protein PRUPE_ppa003127mg [Prunus persica]
Length = 601
Score = 297 bits (761), Expect = 4e-78
Identities = 139/225 (61%), Positives = 178/225 (79%)
Frame = +2
Query: 5 NSLINCLGKAGKAELAFKVYDMLNSVGHRPDGYTWNALLCALYKSNRHADAIKLFEGIRQ 184
N+LIN LGKAG+ ELAF+VY+++ S+GH PD YTWNALL ALY++NRH DA++L+E I+
Sbjct: 367 NALINSLGKAGEVELAFRVYNIMKSLGHSPDAYTWNALLGALYRANRHDDALRLYESIKT 426
Query: 185 EQDFGLNVHLYNTTLMSCQKLGLWDRSLQILWEMENCGIEMSTVSYNHAIYACEVARKPK 364
Q LN HLYN LMSC KLGLWD++L++LW++E G +ST SYN + ACE ARKPK
Sbjct: 427 SQGSQLNSHLYNMALMSCSKLGLWDKALKLLWQLEASGQSVSTASYNLVVSACEKARKPK 486
Query: 365 VALQVYWHMIEQKHTPDIFTYLSLIRSCIWGSLWNDLEEIMESVSPNSSIYNALVHGLCL 544
VALQVY HM+ QK TPDIFTYLSLIR CIWGSLW+++EEI+ +P+ S+YNA + G+CL
Sbjct: 487 VALQVYEHMVHQKCTPDIFTYLSLIRGCIWGSLWDEVEEILNWAAPDMSLYNAAIQGMCL 546
Query: 545 RGKISVAIKLYKKMRSIGLKPDGKTRALMLQHLPNDSRSRRKPQR 679
RGKI +A K+Y KMR GL+PDGKTRA+MLQ+L R +++P R
Sbjct: 547 RGKIELAKKIYTKMRENGLQPDGKTRAMMLQNL--QRRKKKQPPR 589
Score = 75.1 bits (183), Expect = 4e-11
Identities = 54/225 (24%), Positives = 109/225 (48%), Gaps = 7/225 (3%)
Frame = +2
Query: 5 NSLINCLGKAGKAELAFKVYDMLNSVGHRPDGYTWNALLCALYKSNRHADAIKLFEGIRQ 184
NSL++CL + + +V++ + G+T++ +L A+ + + AI++F + +
Sbjct: 190 NSLLSCLLRNELLDDGLRVFEFMKRK-KLATGHTYSLILKAVSVAEGCSSAIEMFVAMEE 248
Query: 185 EQDF--GLNVHLYNTTLMSCQKLGLWDRSLQILWEMENCGIEMSTVSYNHAIYACEVARK 358
E + + +YNT + C K+ W + ++ ++ G+ + V+Y + +
Sbjct: 249 ESEVRDSFDTIVYNTMISICGKVNNWRETERLWRHIKENGLTGTRVTYCLLVSIFVRCSQ 308
Query: 359 PKVALQVYWHMIEQKHTPDIFTYLSLIRSCIWGSLWNDLEEIMESV-----SPNSSIYNA 523
++AL Y MI+ K P T ++I +C W+ I +S+ PN+ NA
Sbjct: 309 HELALDAYNEMIQNKFEPGNDTMHAIIGACSKDGKWDLALNIFQSMLDSGLKPNAVALNA 368
Query: 524 LVHGLCLRGKISVAIKLYKKMRSIGLKPDGKTRALMLQHLPNDSR 658
L++ L G++ +A ++Y M+S+G PD T +L L +R
Sbjct: 369 LINSLGKAGEVELAFRVYNIMKSLGHSPDAYTWNALLGALYRANR 413
>ref|XP_006431232.1| hypothetical protein CICLE_v10011344mg [Citrus clementina]
gi|557533289|gb|ESR44472.1| hypothetical protein
CICLE_v10011344mg [Citrus clementina]
Length = 591
Score = 294 bits (752), Expect = 4e-77
Identities = 138/213 (64%), Positives = 174/213 (81%)
Frame = +2
Query: 5 NSLINCLGKAGKAELAFKVYDMLNSVGHRPDGYTWNALLCALYKSNRHADAIKLFEGIRQ 184
N+LIN LGKAG+ +LAFKV+ ++ +GH PD YTWN LL ALYK+N+HADA++LFE I+
Sbjct: 376 NALINSLGKAGEVKLAFKVHGIIKILGHTPDVYTWNGLLTALYKANQHADALQLFESIKT 435
Query: 185 EQDFGLNVHLYNTTLMSCQKLGLWDRSLQILWEMENCGIEMSTVSYNHAIYACEVARKPK 364
EQ LNVHLYNT LM+CQKLGLW++SLQ+LW+ME + +ST SYN I+ACE+ARKPK
Sbjct: 436 EQSSELNVHLYNTALMACQKLGLWEKSLQLLWQMETSELPVSTSSYNIVIHACEIARKPK 495
Query: 365 VALQVYWHMIEQKHTPDIFTYLSLIRSCIWGSLWNDLEEIMESVSPNSSIYNALVHGLCL 544
+ALQVY HM+ +K TPD TYLSLIR CIWGSLW ++EEI+E V+P+ S+YNA++ G+CL
Sbjct: 496 IALQVYEHMVHRKCTPDTLTYLSLIRGCIWGSLWAEVEEILE-VAPDVSLYNAVIQGMCL 554
Query: 545 RGKISVAIKLYKKMRSIGLKPDGKTRALMLQHL 643
RGK A K+Y +MR GLKPDGKTRALMLQ+L
Sbjct: 555 RGKFESAKKVYTRMRESGLKPDGKTRALMLQNL 587
Score = 71.2 bits (173), Expect = 6e-10
Identities = 51/211 (24%), Positives = 106/211 (50%), Gaps = 9/211 (4%)
Frame = +2
Query: 5 NSLINCLGKAGKAELAFKVYDMLNSVGHRPDGYTWNALLCALYKSNRHADAIKLFEGI-- 178
NSL++CL + G + A +V++ + + G++++ +L A+ + A+ +F G
Sbjct: 199 NSLLSCLIRNGLLDYALRVFEFMRT-NEITTGHSYSLILKAVEHAQGFDSALDMFVGFGG 257
Query: 179 --RQEQDFGLNVHLYNTTLMSCQKLGLWDRSLQILWEMENCGIEMSTVSYNHAIYACEVA 352
RQ++DF +V +YNT + C ++ W ++++ M+ G+ + V+Y+ +
Sbjct: 258 YSRQKKDF--DVIVYNTMISVCGRVNNWIETVKLWRSMKEDGLIGTRVTYSLLVCIFARC 315
Query: 353 RKPKVALQVYWHMIEQKHTPDIFTYLSLIRSCIWGSLWNDLEEIMES-----VSPNSSIY 517
+ ++AL Y MI+ P ++I SC W+ + E+ + PN
Sbjct: 316 SQNELALDAYNEMIQNGLEPGDDVTQAVIGSCTREGKWDLALNLFENMLNGRLKPNLISC 375
Query: 518 NALVHGLCLRGKISVAIKLYKKMRSIGLKPD 610
NAL++ L G++ +A K++ ++ +G PD
Sbjct: 376 NALINSLGKAGEVKLAFKVHGIIKILGHTPD 406
>emb|CBI22283.3| unnamed protein product [Vitis vinifera]
Length = 626
Score = 294 bits (752), Expect = 4e-77
Identities = 142/228 (62%), Positives = 181/228 (79%)
Frame = +2
Query: 5 NSLINCLGKAGKAELAFKVYDMLNSVGHRPDGYTWNALLCALYKSNRHADAIKLFEGIRQ 184
N+LIN +GK+G +LAF+VYD++ S+GH PD YTWNALL ALY++N+HADA+ LFE IR
Sbjct: 397 NALINSIGKSGNVKLAFRVYDVMKSLGHTPDVYTWNALLGALYRANQHADALHLFESIR- 455
Query: 185 EQDFGLNVHLYNTTLMSCQKLGLWDRSLQILWEMENCGIEMSTVSYNHAIYACEVARKPK 364
EQ +N+HLYNT LMSCQKLGLW+R+LQ+LW+ME G+ +S+ SYN I ACEVARKP+
Sbjct: 456 EQSSQVNLHLYNTALMSCQKLGLWNRALQLLWQMEASGLSVSSASYNLVIGACEVARKPE 515
Query: 365 VALQVYWHMIEQKHTPDIFTYLSLIRSCIWGSLWNDLEEIMESVSPNSSIYNALVHGLCL 544
+ALQVY HM++Q+ TPD FT+LSLIRSCIWGSLW +++EI+ + S+YNA + G+CL
Sbjct: 516 IALQVYEHMVQQQCTPDTFTHLSLIRSCIWGSLWAEVKEILNRAGTDVSLYNAAIQGMCL 575
Query: 545 RGKISVAIKLYKKMRSIGLKPDGKTRALMLQHLPNDSRSRRKPQRNSH 688
RGKI A KLY +MR GLKPDGKTRALMLQ+L D+ R +R SH
Sbjct: 576 RGKIESAKKLYMRMRKSGLKPDGKTRALMLQNLQKDA-IRPSNRRISH 622
Score = 59.3 bits (142), Expect = 2e-06
Identities = 49/237 (20%), Positives = 96/237 (40%), Gaps = 41/237 (17%)
Frame = +2
Query: 23 LGKAGKAELAFKVYDMLNSVGHRPDGYTWNALLCALYKSNRHADAIKLFEGIR------- 181
L ++ K ++Y + G +P + N+LL L ++ DA+++FE ++
Sbjct: 191 LSRSNKVRSVLELYRTMEFSGLQPSSHACNSLLSCLLRNEMLDDALRVFESMKANESTTG 250
Query: 182 -------------QEQDFGL----------------NVHLYNTTLMSCQKLGLWDRSLQI 274
Q D L +V Y T + C K+ W ++ +I
Sbjct: 251 HSYSLVLKAIANIQGYDSALKMFSKLEVECKVKKDFDVIAYTTMISICGKVNNWAQTERI 310
Query: 275 LWEMENCGIEMSTVSYNHAIYACEVARKPKVALQVYWHMIEQKHTPDIFTYLSLIRSCIW 454
M+ G+ + V+Y + + ++A+ Y MI+ P ++I +C
Sbjct: 311 WRSMKENGLVGTIVTYRLLVSVFVRCGQNELAIDAYSEMIQNGLKPGEDAMKAIIGACAK 370
Query: 455 GSLWNDLEEIMES-----VSPNSSIYNALVHGLCLRGKISVAIKLYKKMRSIGLKPD 610
W+ + +S + PN NAL++ + G + +A ++Y M+S+G PD
Sbjct: 371 EGKWDLALSVFQSMLNVGLKPNLIACNALINSIGKSGNVKLAFRVYDVMKSLGHTPD 427
>ref|XP_002279015.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29290-like [Vitis vinifera]
Length = 546
Score = 294 bits (752), Expect = 4e-77
Identities = 142/228 (62%), Positives = 181/228 (79%)
Frame = +2
Query: 5 NSLINCLGKAGKAELAFKVYDMLNSVGHRPDGYTWNALLCALYKSNRHADAIKLFEGIRQ 184
N+LIN +GK+G +LAF+VYD++ S+GH PD YTWNALL ALY++N+HADA+ LFE IR
Sbjct: 317 NALINSIGKSGNVKLAFRVYDVMKSLGHTPDVYTWNALLGALYRANQHADALHLFESIR- 375
Query: 185 EQDFGLNVHLYNTTLMSCQKLGLWDRSLQILWEMENCGIEMSTVSYNHAIYACEVARKPK 364
EQ +N+HLYNT LMSCQKLGLW+R+LQ+LW+ME G+ +S+ SYN I ACEVARKP+
Sbjct: 376 EQSSQVNLHLYNTALMSCQKLGLWNRALQLLWQMEASGLSVSSASYNLVIGACEVARKPE 435
Query: 365 VALQVYWHMIEQKHTPDIFTYLSLIRSCIWGSLWNDLEEIMESVSPNSSIYNALVHGLCL 544
+ALQVY HM++Q+ TPD FT+LSLIRSCIWGSLW +++EI+ + S+YNA + G+CL
Sbjct: 436 IALQVYEHMVQQQCTPDTFTHLSLIRSCIWGSLWAEVKEILNRAGTDVSLYNAAIQGMCL 495
Query: 545 RGKISVAIKLYKKMRSIGLKPDGKTRALMLQHLPNDSRSRRKPQRNSH 688
RGKI A KLY +MR GLKPDGKTRALMLQ+L D+ R +R SH
Sbjct: 496 RGKIESAKKLYMRMRKSGLKPDGKTRALMLQNLQKDA-IRPSNRRISH 542
Score = 59.3 bits (142), Expect = 2e-06
Identities = 49/237 (20%), Positives = 96/237 (40%), Gaps = 41/237 (17%)
Frame = +2
Query: 23 LGKAGKAELAFKVYDMLNSVGHRPDGYTWNALLCALYKSNRHADAIKLFEGIR------- 181
L ++ K ++Y + G +P + N+LL L ++ DA+++FE ++
Sbjct: 111 LSRSNKVRSVLELYRTMEFSGLQPSSHACNSLLSCLLRNEMLDDALRVFESMKANESTTG 170
Query: 182 -------------QEQDFGL----------------NVHLYNTTLMSCQKLGLWDRSLQI 274
Q D L +V Y T + C K+ W ++ +I
Sbjct: 171 HSYSLVLKAIANIQGYDSALKMFSKLEVECKVKKDFDVIAYTTMISICGKVNNWAQTERI 230
Query: 275 LWEMENCGIEMSTVSYNHAIYACEVARKPKVALQVYWHMIEQKHTPDIFTYLSLIRSCIW 454
M+ G+ + V+Y + + ++A+ Y MI+ P ++I +C
Sbjct: 231 WRSMKENGLVGTIVTYRLLVSVFVRCGQNELAIDAYSEMIQNGLKPGEDAMKAIIGACAK 290
Query: 455 GSLWNDLEEIMES-----VSPNSSIYNALVHGLCLRGKISVAIKLYKKMRSIGLKPD 610
W+ + +S + PN NAL++ + G + +A ++Y M+S+G PD
Sbjct: 291 EGKWDLALSVFQSMLNVGLKPNLIACNALINSIGKSGNVKLAFRVYDVMKSLGHTPD 347
>gb|EXB77627.1| hypothetical protein L484_018143 [Morus notabilis]
Length = 550
Score = 291 bits (745), Expect = 3e-76
Identities = 137/228 (60%), Positives = 178/228 (78%), Gaps = 2/228 (0%)
Frame = +2
Query: 5 NSLINCLGKAGKAELAFKVYDMLNSVGHRPDGYTWNALLCALYKSNRHADAIKLFEGIRQ 184
N++IN LGKAG+ +LAF+V+D++ S+GH PD YTWNALL ALY++N H DA++LFE I+Q
Sbjct: 312 NAVINSLGKAGEIKLAFRVFDVMKSLGHLPDTYTWNALLGALYRANLHDDALRLFERIKQ 371
Query: 185 EQDFGLNVHLYNTTLMSCQKLGLWDRSLQILWEMENCGIEMSTVSYNHAIYACEVARKPK 364
+QD LN+HLYN L+SC KLGLW+R++Q+LW+ME G+ +S SYN I ACE ARKP
Sbjct: 372 DQDSELNLHLYNIALISCSKLGLWERAVQLLWQMEANGMSISAASYNLVINACETARKPD 431
Query: 365 VALQVYWHMIEQKHTPDIFTYLSLIRSCIWGSLWNDLEEIMESVSPNSSIYNALVHGLCL 544
VA+QVY HM+ K PD FT+LSLIR CIWGSLWN++EEI+ +P++S+YNA + G+CL
Sbjct: 432 VAVQVYEHMVHLKCIPDTFTHLSLIRVCIWGSLWNEVEEILNQAAPDASLYNAAIQGMCL 491
Query: 545 RGKISVAIKLYKKMRSIGLKPDGKTRALMLQHLPNDS--RSRRKPQRN 682
RGKI A KLY KMR+ GL+PDGKTRA+MLQ+L DS R P R+
Sbjct: 492 RGKIDTAKKLYAKMRNCGLQPDGKTRAMMLQNLRKDSVKHKYRPPSRH 539
>ref|XP_002323888.2| hypothetical protein POPTR_0017s12620g [Populus trichocarpa]
gi|550320141|gb|EEF04021.2| hypothetical protein
POPTR_0017s12620g [Populus trichocarpa]
Length = 716
Score = 291 bits (745), Expect = 3e-76
Identities = 139/222 (62%), Positives = 177/222 (79%)
Frame = +2
Query: 5 NSLINCLGKAGKAELAFKVYDMLNSVGHRPDGYTWNALLCALYKSNRHADAIKLFEGIRQ 184
N+LIN LGKAG+ +LAFKV+ +L S+GH PD YTWNALL LY++N+H DA++LFE +++
Sbjct: 492 NALINLLGKAGEIKLAFKVFKILKSLGHTPDEYTWNALLSGLYRANQHVDALQLFERLKR 551
Query: 185 EQDFGLNVHLYNTTLMSCQKLGLWDRSLQILWEMENCGIEMSTVSYNHAIYACEVARKPK 364
EQ+ LN HLYNT LMSCQKLGLWDR+LQ++W+ E G+ +ST SYN AI ACEVARKP+
Sbjct: 552 EQNSLLNEHLYNTALMSCQKLGLWDRALQLVWQAEASGLSVSTASYNLAIGACEVARKPE 611
Query: 365 VALQVYWHMIEQKHTPDIFTYLSLIRSCIWGSLWNDLEEIMESVSPNSSIYNALVHGLCL 544
VAL+VY HM+ QK PD FTYLSLIRSCIW SLW+++EEI++ V+P+ S+YNA++HG+CL
Sbjct: 612 VALEVYEHMVHQKCPPDTFTYLSLIRSCIWASLWDEVEEILDQVAPDVSLYNAVIHGMCL 671
Query: 545 RGKISVAIKLYKKMRSIGLKPDGKTRALMLQHLPNDSRSRRK 670
RGK A KLY KM GLKPDG ALMLQ+L +S R +
Sbjct: 672 RGKTESAKKLYMKMGKSGLKPDG---ALMLQNLRKNSTKRSR 710
Score = 64.7 bits (156), Expect = 5e-08
Identities = 55/222 (24%), Positives = 108/222 (48%), Gaps = 9/222 (4%)
Frame = +2
Query: 5 NSLINCLGKAGKAELAFKVYDMLNSVGHRPDGYTWNALLCALYKSNRHADAIKLFEGI-- 178
NSL++CL + E A +V++ + G+ ++ +L A+ + A+ +F +
Sbjct: 315 NSLLSCLIRHELHEDALRVFEYMKK-NEITTGHAYSLILKAVASTKGCDSALDMFTELEA 373
Query: 179 --RQEQDFGLNVHLYNTTLMSCQKLGLWDRSLQILWEMENCGIEMSTVSYNHAIYACEVA 352
R+++DF +V +YNT + C K W + +I M+ + V+Y+ +
Sbjct: 374 FSREKKDF--DVIVYNTMISVCGKEKNWVETERIWRSMKENDYHGTQVTYSLLVSIFVRC 431
Query: 353 RKPKVALQVYWHMIEQKHTPDIFTYLSLIRSCI----WGSLWNDLEEIME-SVSPNSSIY 517
+ ++AL+ Y M++ P T ++I +C W N + +++ + PN
Sbjct: 432 GRNELALEAYSEMVQNGLKPREDTLHAVIGACSKKGNWDLALNIFQNMLDHGLKPNLIAC 491
Query: 518 NALVHGLCLRGKISVAIKLYKKMRSIGLKPDGKTRALMLQHL 643
NAL++ L G+I +A K++K ++S+G PD T +L L
Sbjct: 492 NALINLLGKAGEIKLAFKVFKILKSLGHTPDEYTWNALLSGL 533
>ref|XP_004141597.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29290-like
[Cucumis sativus]
Length = 600
Score = 290 bits (742), Expect = 6e-76
Identities = 139/237 (58%), Positives = 182/237 (76%), Gaps = 8/237 (3%)
Frame = +2
Query: 2 FNSLINCLGKAGKAELAFKVYDMLNSVGHRPDGYTWNALLCALYKSNRHADAIKLFEGIR 181
FN+LIN LGKA + LAF VY+++ S+GH PD YTWNALL ALYK+NR++DAI LFE ++
Sbjct: 363 FNALINALGKAKEVTLAFSVYNVMKSMGHSPDVYTWNALLGALYKANRYSDAIHLFEFVK 422
Query: 182 QEQDFGLNVHLYNTTLMSCQKLGLWDRSLQILWEMENCGIEMSTVSYNHAIYACEVARKP 361
+E+ LN+H+YNT LMSC KLGLW+R++QILWEME G+ +ST SYN + ACE+ARKP
Sbjct: 423 REK-VQLNIHIYNTILMSCSKLGLWERAVQILWEMEVSGLSISTSSYNIVMTACEMARKP 481
Query: 362 KVALQVYWHMIEQKHTPDIFTYLSLIRSCIWGSLWNDLEEIMESVSPNSSIYNALVHGLC 541
++ALQVY M+ QKHTPD FT+LSLIR CIWGSLW+++E ++ +P+ S+YN ++ G+C
Sbjct: 482 EIALQVYERMVHQKHTPDTFTHLSLIRCCIWGSLWDEVELLLNKSAPDVSVYNVVIQGMC 541
Query: 542 LRGKISVAIKLYKKMRSIGLKPDGKTRALMLQHLPNDSRSR--------RKPQRNSH 688
LRGK +A KLY KMR G++PDGKTRALMLQ+LP D R +K QR+ H
Sbjct: 542 LRGKSDLAKKLYTKMRENGIQPDGKTRALMLQNLPKDPARRKNRWASGFKKRQRHYH 598
Score = 65.5 bits (158), Expect = 3e-08
Identities = 48/205 (23%), Positives = 95/205 (46%), Gaps = 5/205 (2%)
Frame = +2
Query: 2 FNSLINCLGKAGKAELAFKVYDMLNSVGHRPDGYTWNALLCALYKSNRHADAIKLFEGIR 181
+N++I+ GK A + + ++ G T++ L+ + N++ AI + +
Sbjct: 258 YNTMISICGKDNNWVEAERTWRLMEKNGCSATRITYSLLVSTFVRCNQNELAIDTYVKMV 317
Query: 182 QEQDFGLNVHLYNTTLMSCQKLGLWDRSLQILWEMENCGIEMSTVSYNHAIYACEVARKP 361
Q F + + K G WD +L++ +M CG++ ++VS+N I A A++
Sbjct: 318 QNS-FKPGNDTMQAIIGASSKEGKWDFALRVFQDMLKCGLQPNSVSFNALINALGKAKEV 376
Query: 362 KVALQVYWHMIEQKHTPDIFTYLSLIRSCIWGSLWNDLEEIM-----ESVSPNSSIYNAL 526
+A VY M H+PD++T+ +L+ + + ++D + E V N IYN +
Sbjct: 377 TLAFSVYNVMKSMGHSPDVYTWNALLGALYKANRYSDAIHLFEFVKREKVQLNIHIYNTI 436
Query: 527 VHGLCLRGKISVAIKLYKKMRSIGL 601
+ G A+++ +M GL
Sbjct: 437 LMSCSKLGLWERAVQILWEMEVSGL 461
Score = 59.3 bits (142), Expect = 2e-06
Identities = 51/245 (20%), Positives = 106/245 (43%), Gaps = 17/245 (6%)
Frame = +2
Query: 5 NSLINCLGKAGKAELAFKVYDMLNSVGHRPDGYTWNALLCALYKSNRHADAIKLFEGIRQ 184
NSL+ CL + ++++ + + G+T++ +L A+ ++ A+++F+
Sbjct: 188 NSLLACLLRNELFADGLRIFEFMK-LNELSTGHTYSLVLKAVANAHGFLSALEMFKAWEH 246
Query: 185 EQDFG-LNVHLYNTTLMSCQKLGLWDRSLQILWEMENCGIEMSTVSYNHAIYACEVARKP 361
+ + +YNT + C K W + + ME G + ++Y+ + +
Sbjct: 247 QCVLAQFDAIVYNTMISICGKDNNWVEAERTWRLMEKNGCSATRITYSLLVSTFVRCNQN 306
Query: 362 KVALQVYWHMIEQKHTPDIFTYLSLIRSCIWGSLWNDLEEIMESV-----SPNSSIYNAL 526
++A+ Y M++ P T ++I + W+ + + + PNS +NAL
Sbjct: 307 ELAIDTYVKMVQNSFKPGNDTMQAIIGASSKEGKWDFALRVFQDMLKCGLQPNSVSFNAL 366
Query: 527 VHGLCLRGKISVAIKLYKKMRSIGLKPDGKTRALMLQHLPNDSR-----------SRRKP 673
++ L ++++A +Y M+S+G PD T +L L +R R K
Sbjct: 367 INALGKAKEVTLAFSVYNVMKSMGHSPDVYTWNALLGALYKANRYSDAIHLFEFVKREKV 426
Query: 674 QRNSH 688
Q N H
Sbjct: 427 QLNIH 431
>ref|XP_004985231.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29290-like
[Setaria italica]
Length = 583
Score = 289 bits (740), Expect = 1e-75
Identities = 136/217 (62%), Positives = 169/217 (77%)
Frame = +2
Query: 2 FNSLINCLGKAGKAELAFKVYDMLNSVGHRPDGYTWNALLCALYKSNRHADAIKLFEGIR 181
FNS IN LGKAG+ ELAF++Y +L S G +PD YTW+ALL ALYKS R D ++LF+GI+
Sbjct: 367 FNSTINALGKAGQDELAFRMYHLLTSSGFKPDQYTWSALLSALYKSGRCWDVLELFQGIK 426
Query: 182 QEQDFGLNVHLYNTTLMSCQKLGLWDRSLQILWEMENCGIEMSTVSYNHAIYACEVARKP 361
+ LN HLYN LMSC++LG W+ LQ+LW ME G+++S VSYNH I ACEVA KP
Sbjct: 427 AKHPTLLNDHLYNIALMSCERLGQWEHGLQLLWMMEKSGLKVSVVSYNHVIGACEVASKP 486
Query: 362 KVALQVYWHMIEQKHTPDIFTYLSLIRSCIWGSLWNDLEEIMESVSPNSSIYNALVHGLC 541
KVALQVY MI Q+ PD FT+LS+IR+CIWGSLWN++E+I+E V P+SS+YN ++HGLC
Sbjct: 487 KVALQVYRRMINQRCLPDTFTHLSVIRACIWGSLWNEVEDILEEVDPDSSVYNTVIHGLC 546
Query: 542 LRGKISVAIKLYKKMRSIGLKPDGKTRALMLQHLPND 652
LRGKI +A K+Y KMR IGL PDGKTRA MLQH+ D
Sbjct: 547 LRGKIGLANKVYAKMRGIGLVPDGKTRAFMLQHIATD 583
Score = 66.6 bits (161), Expect = 1e-08
Identities = 47/225 (20%), Positives = 101/225 (44%), Gaps = 7/225 (3%)
Frame = +2
Query: 5 NSLINCLGKAGKAELAFKVYDMLNSVGHRPDGYTWNALLCALYKSNRHADAIKLFEGIRQ 184
NSL+ C + A ++++ + G+T+ +L A+ + + A+++F I +
Sbjct: 191 NSLLACFVRRSSLADAMRMFEFMKGK-RMATGHTYTLILKAVASNGGYVSALEMFNEIEE 249
Query: 185 EQDFGLNVHL--YNTTLMSCQKLGLWDRSLQILWEMENCGIEMSTVSYNHAIYACEVARK 358
E+D NV + YNT + C + W ++ +E + + ++Y+ + +
Sbjct: 250 EEDSKKNVDVIVYNTMISVCGRAKDWMLVERLWRRLEENSLSGTLLTYDLLVSIFVQCGQ 309
Query: 359 PKVALQVYWHMIEQKHTPDIFTYLSLIRSCIWGSLWNDL-----EEIMESVSPNSSIYNA 523
++A+ Y M++ P ++I SC W+ + ++PN ++N+
Sbjct: 310 CELAIAAYQEMLQNGLDPSEDIMKAIIASCTKEGKWDFALATFSRMLSAGMTPNIILFNS 369
Query: 524 LVHGLCLRGKISVAIKLYKKMRSIGLKPDGKTRALMLQHLPNDSR 658
++ L G+ +A ++Y + S G KPD T + +L L R
Sbjct: 370 TINALGKAGQDELAFRMYHLLTSSGFKPDQYTWSALLSALYKSGR 414
>ref|NP_001168260.1| uncharacterized protein LOC100382024 [Zea mays]
gi|223947083|gb|ACN27625.1| unknown [Zea mays]
gi|414865479|tpg|DAA44036.1| TPA: hypothetical protein
ZEAMMB73_641935 [Zea mays]
Length = 581
Score = 288 bits (736), Expect = 3e-75
Identities = 136/217 (62%), Positives = 171/217 (78%)
Frame = +2
Query: 2 FNSLINCLGKAGKAELAFKVYDMLNSVGHRPDGYTWNALLCALYKSNRHADAIKLFEGIR 181
FNS+IN LGKAG+ ELAF++Y +L G +PD YTW+ALL ALY+S R D +KLF GI+
Sbjct: 365 FNSIINSLGKAGQDELAFRMYHLLEKSGLKPDQYTWSALLLALYRSGRCWDCLKLFHGIK 424
Query: 182 QEQDFGLNVHLYNTTLMSCQKLGLWDRSLQILWEMENCGIEMSTVSYNHAIYACEVARKP 361
+ LN HLYNT LMSC+KLG W+ LQ+LW ME G+++S VSYNH I ACEVA KP
Sbjct: 425 GKHPTLLNDHLYNTALMSCEKLGQWEHGLQLLWLMEKRGLKLSVVSYNHVIGACEVASKP 484
Query: 362 KVALQVYWHMIEQKHTPDIFTYLSLIRSCIWGSLWNDLEEIMESVSPNSSIYNALVHGLC 541
KVAL+VY MI Q+ +PD FT+LS+IR+CIWGSLW ++E+I+E V+P+SSIYNA++HGLC
Sbjct: 485 KVALKVYQRMINQRCSPDTFTHLSVIRACIWGSLWTEVEDILEEVAPDSSIYNAVIHGLC 544
Query: 542 LRGKISVAIKLYKKMRSIGLKPDGKTRALMLQHLPND 652
LRGK +A K+Y KMRS+GL PDGKTRA MLQH+ D
Sbjct: 545 LRGKTGLANKVYAKMRSMGLVPDGKTRAFMLQHIATD 581
>ref|XP_004169658.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29290-like
[Cucumis sativus]
Length = 600
Score = 286 bits (731), Expect = 1e-74
Identities = 138/237 (58%), Positives = 181/237 (76%), Gaps = 8/237 (3%)
Frame = +2
Query: 2 FNSLINCLGKAGKAELAFKVYDMLNSVGHRPDGYTWNALLCALYKSNRHADAIKLFEGIR 181
FN+LIN LGKA + LAF VY+++ S+GH PD YTWNALL ALYK+NR++DAI LFE ++
Sbjct: 363 FNALINALGKAKEVTLAFSVYNVMKSMGHSPDVYTWNALLGALYKANRYSDAIHLFEFVK 422
Query: 182 QEQDFGLNVHLYNTTLMSCQKLGLWDRSLQILWEMENCGIEMSTVSYNHAIYACEVARKP 361
+E+ LN+H+YNT LMSC KLGLW+R++QILWEME G+ +ST SYN + ACE+ARKP
Sbjct: 423 REK-VQLNIHIYNTILMSCSKLGLWERAVQILWEMEVSGLSISTSSYNIVMTACEMARKP 481
Query: 362 KVALQVYWHMIEQKHTPDIFTYLSLIRSCIWGSLWNDLEEIMESVSPNSSIYNALVHGLC 541
++ALQVY M+ QK TPD FT+LSLIR CIWGSLW+++E ++ +P+ S+YN ++ G+C
Sbjct: 482 EIALQVYERMVHQKLTPDTFTHLSLIRCCIWGSLWDEVELLLNKSAPDVSVYNVVIQGMC 541
Query: 542 LRGKISVAIKLYKKMRSIGLKPDGKTRALMLQHLPNDSRSR--------RKPQRNSH 688
LRGK +A KLY KMR G++PDGKTRALMLQ+LP D R +K QR+ H
Sbjct: 542 LRGKSDLAKKLYTKMRENGIQPDGKTRALMLQNLPKDPARRKNRWASGFKKRQRHYH 598
Score = 65.1 bits (157), Expect = 4e-08
Identities = 48/205 (23%), Positives = 95/205 (46%), Gaps = 5/205 (2%)
Frame = +2
Query: 2 FNSLINCLGKAGKAELAFKVYDMLNSVGHRPDGYTWNALLCALYKSNRHADAIKLFEGIR 181
+N++I+ GK A + + ++ G T++ L+ + N++ AI + +
Sbjct: 258 YNTMISICGKDNNWVEAERTWRLMEKNGCGATRITYSLLVSTFVRCNQNELAIDTYVKMV 317
Query: 182 QEQDFGLNVHLYNTTLMSCQKLGLWDRSLQILWEMENCGIEMSTVSYNHAIYACEVARKP 361
Q F + + K G WD +L++ +M CG++ ++VS+N I A A++
Sbjct: 318 QNS-FKPGNDTMQAIIGASSKEGKWDFALRVFQDMLKCGLQPNSVSFNALINALGKAKEV 376
Query: 362 KVALQVYWHMIEQKHTPDIFTYLSLIRSCIWGSLWNDLEEIM-----ESVSPNSSIYNAL 526
+A VY M H+PD++T+ +L+ + + ++D + E V N IYN +
Sbjct: 377 TLAFSVYNVMKSMGHSPDVYTWNALLGALYKANRYSDAIHLFEFVKREKVQLNIHIYNTI 436
Query: 527 VHGLCLRGKISVAIKLYKKMRSIGL 601
+ G A+++ +M GL
Sbjct: 437 LMSCSKLGLWERAVQILWEMEVSGL 461
Score = 58.5 bits (140), Expect = 4e-06
Identities = 51/245 (20%), Positives = 106/245 (43%), Gaps = 17/245 (6%)
Frame = +2
Query: 5 NSLINCLGKAGKAELAFKVYDMLNSVGHRPDGYTWNALLCALYKSNRHADAIKLFEGIRQ 184
NSL+ CL + ++++ + + G+T++ +L A+ ++ A+++F+
Sbjct: 188 NSLLACLLRNELFADGLRIFEFMK-LNELSTGHTYSLVLKAVANAHGFLSALEMFKAWEH 246
Query: 185 EQDFG-LNVHLYNTTLMSCQKLGLWDRSLQILWEMENCGIEMSTVSYNHAIYACEVARKP 361
+ + +YNT + C K W + + ME G + ++Y+ + +
Sbjct: 247 QCVLAQFDAIVYNTMISICGKDNNWVEAERTWRLMEKNGCGATRITYSLLVSTFVRCNQN 306
Query: 362 KVALQVYWHMIEQKHTPDIFTYLSLIRSCIWGSLWNDLEEIMESV-----SPNSSIYNAL 526
++A+ Y M++ P T ++I + W+ + + + PNS +NAL
Sbjct: 307 ELAIDTYVKMVQNSFKPGNDTMQAIIGASSKEGKWDFALRVFQDMLKCGLQPNSVSFNAL 366
Query: 527 VHGLCLRGKISVAIKLYKKMRSIGLKPDGKTRALMLQHLPNDSR-----------SRRKP 673
++ L ++++A +Y M+S+G PD T +L L +R R K
Sbjct: 367 INALGKAKEVTLAFSVYNVMKSMGHSPDVYTWNALLGALYKANRYSDAIHLFEFVKREKV 426
Query: 674 QRNSH 688
Q N H
Sbjct: 427 QLNIH 431
>ref|XP_006649617.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29290-like
[Oryza brachyantha]
Length = 570
Score = 285 bits (729), Expect = 2e-74
Identities = 133/217 (61%), Positives = 171/217 (78%)
Frame = +2
Query: 2 FNSLINCLGKAGKAELAFKVYDMLNSVGHRPDGYTWNALLCALYKSNRHADAIKLFEGIR 181
FNS+IN LGKAG+ ELAF++Y +L S G +PD YTW+ALL ALY+S R DA+ LF+GI+
Sbjct: 354 FNSIINSLGKAGQDELAFRMYHLLTSSGLKPDQYTWSALLSALYRSGRCWDALDLFQGIK 413
Query: 182 QEQDFGLNVHLYNTTLMSCQKLGLWDRSLQILWEMENCGIEMSTVSYNHAIYACEVARKP 361
+ LN HLYN LMSC++LG W+ +LQ+LW ME +++S VSYNH I ACEVAR+P
Sbjct: 414 TKHSSLLNNHLYNIALMSCERLGQWEHALQLLWMMEKSDLQISAVSYNHVIGACEVARQP 473
Query: 362 KVALQVYWHMIEQKHTPDIFTYLSLIRSCIWGSLWNDLEEIMESVSPNSSIYNALVHGLC 541
K+ALQVY M Q +PD FT+LS+IR+CIWGSLWN++E+I+E V+P+SS+YN ++HGLC
Sbjct: 474 KIALQVYQRMTHQGCSPDTFTHLSVIRACIWGSLWNEVEDILEEVAPDSSVYNTVIHGLC 533
Query: 542 LRGKISVAIKLYKKMRSIGLKPDGKTRALMLQHLPND 652
LR KI +A K+Y KMRSIGLKPDGKTR+ MLQH D
Sbjct: 534 LRDKIRLARKVYMKMRSIGLKPDGKTRSFMLQHFATD 570
Score = 65.1 bits (157), Expect = 4e-08
Identities = 50/224 (22%), Positives = 100/224 (44%), Gaps = 6/224 (2%)
Frame = +2
Query: 5 NSLINCLGKAGKAELAFKVYDMLNSVGHRPDGYTWNALLCALYKSNRHADAIKLFEGIRQ 184
NSL+ C + A KV+ + G G+++ +L A+ + + A+K+F I +
Sbjct: 180 NSLLACFVRKDYFADAMKVFGFMKEKG-MATGHSYTLILKAVAGNEGYFAALKMFNEIEE 238
Query: 185 EQDFGLNVHLYNTTLMSCQKLGLWDRSLQILW-EMENCGIEMSTVSYNHAIYACEVARKP 361
++V +YNT + C + W R ++ LW + + ++Y+ + +
Sbjct: 239 SDRNNVDVIVYNTMISVCGRAKDW-RQVERLWRRLGENSFSGTLMTYDLLVSTFVQCGQS 297
Query: 362 KVALQVYWHMIEQKHTPDIFTYLSLIRSCIWGSLWNDL-----EEIMESVSPNSSIYNAL 526
++A+ Y MI P ++I SC W + + + P+ ++N++
Sbjct: 298 ELAIDAYQEMIGSGIDPSEDVLKAIIASCTKEGKWEFALTTFRKMLGAGMKPSIIVFNSI 357
Query: 527 VHGLCLRGKISVAIKLYKKMRSIGLKPDGKTRALMLQHLPNDSR 658
++ L G+ +A ++Y + S GLKPD T + +L L R
Sbjct: 358 INSLGKAGQDELAFRMYHLLTSSGLKPDQYTWSALLSALYRSGR 401
>ref|XP_004304183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29290-like
[Fragaria vesca subsp. vesca]
Length = 588
Score = 284 bits (726), Expect = 4e-74
Identities = 136/225 (60%), Positives = 172/225 (76%)
Frame = +2
Query: 2 FNSLINCLGKAGKAELAFKVYDMLNSVGHRPDGYTWNALLCALYKSNRHADAIKLFEGIR 181
FN+LIN LGKA + ELAF+VY+++ S+GH PD YTW ALL ALY++NRH DAIKLFE I+
Sbjct: 351 FNALINSLGKAAEVELAFRVYNIMKSMGHSPDPYTWKALLNALYRANRHDDAIKLFESIK 410
Query: 182 QEQDFGLNVHLYNTTLMSCQKLGLWDRSLQILWEMENCGIEMSTVSYNHAIYACEVARKP 361
+ Q LN HLYN LMSC KLGLWD+SLQ+LW++E + +ST SYN I ACE+ARKP
Sbjct: 411 RSQRSQLNSHLYNMALMSCSKLGLWDKSLQLLWQLEASELSVSTASYNLVISACEMARKP 470
Query: 362 KVALQVYWHMIEQKHTPDIFTYLSLIRSCIWGSLWNDLEEIMESVSPNSSIYNALVHGLC 541
+VALQVY HM+ QK TPD FT+LSLIRSC+WGS W ++EEI+ +P++S+YNA + G+
Sbjct: 471 EVALQVYGHMVHQKCTPDTFTHLSLIRSCVWGSFWEEVEEILNHAAPDASLYNAAIQGMS 530
Query: 542 LRGKISVAIKLYKKMRSIGLKPDGKTRALMLQHLPNDSRSRRKPQ 676
+GK +A KLY MR GL+PDGKTRA+MLQ+L R RK Q
Sbjct: 531 FQGKTELAKKLYTNMRENGLQPDGKTRAVMLQNL----RRPRKTQ 571
Score = 79.3 bits (194), Expect = 2e-12
Identities = 55/225 (24%), Positives = 114/225 (50%), Gaps = 7/225 (3%)
Frame = +2
Query: 5 NSLINCLGKAGKAELAFKVYDMLNSVGHRPDGYTWNALLCALYKSNRHADAIKLFEGIRQ 184
NSL++CL + G + +V++ + G++++ +L A+ ++ AI++F + +
Sbjct: 175 NSLLSCLLRNGFLDNGLRVFEFMKRK-KLTTGHSYSLILKAVSDAHGCDSAIEMFREMEK 233
Query: 185 EQDF--GLNVHLYNTTLMSCQKLGLWDRSLQILWEMENCGIEMSTVSYNHAIYACEVARK 358
E G + +YNT + C K+ W + ++ +++ G + V+Y + +
Sbjct: 234 ESGVKDGFDTIVYNTMISVCGKVNNWRETERLWRDIKENGHTGTRVTYCLLVSIFVRCGE 293
Query: 359 PKVALQVYWHMIEQKHTPDIFTYLSLIRSCI----WGSLWNDLEEIMES-VSPNSSIYNA 523
++AL Y MIE K P I T +++ +C W N +++++S + PN+ +NA
Sbjct: 294 HELALDAYNEMIENKFEPGIDTMQAMVGACSKEGNWDLALNIFQDMLDSGLKPNAIAFNA 353
Query: 524 LVHGLCLRGKISVAIKLYKKMRSIGLKPDGKTRALMLQHLPNDSR 658
L++ L ++ +A ++Y M+S+G PD T +L L +R
Sbjct: 354 LINSLGKAAEVELAFRVYNIMKSMGHSPDPYTWKALLNALYRANR 398
Score = 60.5 bits (145), Expect = 1e-06
Identities = 40/179 (22%), Positives = 83/179 (46%), Gaps = 6/179 (3%)
Frame = +2
Query: 2 FNSLINCLGKAGKAELAFKVYDMLNSVGHRPDGYTWNALLCALYKSNRHADAIKLFEGIR 181
+N++I+ GK +++ + GH T+ L+ + H A+ + +
Sbjct: 246 YNTMISVCGKVNNWRETERLWRDIKENGHTGTRVTYCLLVSIFVRCGEHELALDAYNEMI 305
Query: 182 QEQDFGLNVHLYNTTLMSCQKLGLWDRSLQILWEMENCGIEMSTVSYNHAIYACEVARKP 361
E F + + +C K G WD +L I +M + G++ + +++N I + A +
Sbjct: 306 -ENKFEPGIDTMQAMVGACSKEGNWDLALNIFQDMLDSGLKPNAIAFNALINSLGKAAEV 364
Query: 362 KVALQVYWHMIEQKHTPDIFTYLSLIRSCIWGSLWNDLEEIMESVSP------NSSIYN 520
++A +VY M H+PD +T+ +L+ + + +D ++ ES+ NS +YN
Sbjct: 365 ELAFRVYNIMKSMGHSPDPYTWKALLNALYRANRHDDAIKLFESIKRSQRSQLNSHLYN 423
>ref|XP_002468297.1| hypothetical protein SORBIDRAFT_01g043190 [Sorghum bicolor]
gi|241922151|gb|EER95295.1| hypothetical protein
SORBIDRAFT_01g043190 [Sorghum bicolor]
Length = 581
Score = 284 bits (726), Expect = 4e-74
Identities = 133/217 (61%), Positives = 170/217 (78%)
Frame = +2
Query: 2 FNSLINCLGKAGKAELAFKVYDMLNSVGHRPDGYTWNALLCALYKSNRHADAIKLFEGIR 181
FNS+IN LGKAG+ ELAF++Y +L G +PD YTW+ALL LY+S R D ++LF+GI+
Sbjct: 365 FNSIINSLGKAGQDELAFRMYHLLKKSGLKPDQYTWSALLSGLYRSGRCWDCLELFQGIK 424
Query: 182 QEQDFGLNVHLYNTTLMSCQKLGLWDRSLQILWEMENCGIEMSTVSYNHAIYACEVARKP 361
+ LN HLYN LMSC+KLG W+ LQ+LW ME G+E+S VSYNH I ACE A +P
Sbjct: 425 AKHPALLNGHLYNIALMSCEKLGQWEHGLQLLWMMEKGGLEISVVSYNHVIGACEFASEP 484
Query: 362 KVALQVYWHMIEQKHTPDIFTYLSLIRSCIWGSLWNDLEEIMESVSPNSSIYNALVHGLC 541
KVAL+VY MI ++ +PD FT+LS+IR+CIWGSLW ++E+I+E V+PNSSIYNA++HGLC
Sbjct: 485 KVALKVYQRMINRRCSPDTFTHLSVIRACIWGSLWTEVEDILEEVAPNSSIYNAVIHGLC 544
Query: 542 LRGKISVAIKLYKKMRSIGLKPDGKTRALMLQHLPND 652
LRGKI +A ++Y KMRSIGL PDGKTRA MLQH+ D
Sbjct: 545 LRGKIGLANRVYAKMRSIGLVPDGKTRAFMLQHIATD 581
>gb|ABF94602.1| expressed protein [Oryza sativa Japonica Group]
gi|125585367|gb|EAZ26031.1| hypothetical protein
OsJ_09884 [Oryza sativa Japonica Group]
Length = 582
Score = 283 bits (723), Expect = 1e-73
Identities = 133/217 (61%), Positives = 171/217 (78%)
Frame = +2
Query: 2 FNSLINCLGKAGKAELAFKVYDMLNSVGHRPDGYTWNALLCALYKSNRHADAIKLFEGIR 181
FNS+IN LGKAG+ ELAF++Y +L S G +PD YTW+ALL ALY+S R D + LF+GI+
Sbjct: 365 FNSIINSLGKAGEDELAFRMYHLLTSSGLKPDQYTWSALLSALYRSGRCWDVLDLFQGIK 424
Query: 182 QEQDFGLNVHLYNTTLMSCQKLGLWDRSLQILWEMENCGIEMSTVSYNHAIYACEVARKP 361
+ LN HLYN LMSC++LG W+ LQ+LW ME G+++S VSYNH I ACEVAR P
Sbjct: 425 TKHSALLNNHLYNIALMSCERLGQWEHGLQLLWMMERGGLQISAVSYNHVIGACEVARMP 484
Query: 362 KVALQVYWHMIEQKHTPDIFTYLSLIRSCIWGSLWNDLEEIMESVSPNSSIYNALVHGLC 541
KVAL+VY M + +PD FT+LS+IR+CIWGSLWN++E+I+E V+P+SS+YN ++HGLC
Sbjct: 485 KVALKVYRRMTHRGCSPDTFTHLSVIRACIWGSLWNEVEDILEEVAPDSSVYNTVIHGLC 544
Query: 542 LRGKISVAIKLYKKMRSIGLKPDGKTRALMLQHLPND 652
LRGKI +A K+Y KMRSIGLKPDGKTR+ MLQ+L D
Sbjct: 545 LRGKIRLARKVYTKMRSIGLKPDGKTRSFMLQNLATD 581
Score = 71.6 bits (174), Expect = 4e-10
Identities = 50/224 (22%), Positives = 103/224 (45%), Gaps = 6/224 (2%)
Frame = +2
Query: 5 NSLINCLGKAGKAELAFKVYDMLNSVGHRPDGYTWNALLCALYKSNRHADAIKLFEGIRQ 184
NSL+ C + G A KV++ + G G+++ +L A+ + + A+K+F+ I +
Sbjct: 191 NSLLACFVRRGSFADAMKVFEFMKGKG-MATGHSYTLILKAVATTEGYFAALKMFDEIEE 249
Query: 185 EQDFGLNVHLYNTTLMSCQKLGLWDRSLQILW-EMENCGIEMSTVSYNHAIYACEVARKP 361
++V +YNT + C + W R ++ LW + + + ++Y+ + +
Sbjct: 250 SDKKNVDVIVYNTVISVCGRAKDW-RQVERLWRRLGENSLSGTLMTYDLLVSTFVQCGQS 308
Query: 362 KVALQVYWHMIEQKHTPDIFTYLSLIRSCIWGSLWNDL-----EEIMESVSPNSSIYNAL 526
++A+ Y M + P ++I SC W + + P+ ++N++
Sbjct: 309 ELAVDAYQEMFKSGIDPSEDILKAIIASCTKEGKWEFALTTFRRMLSAGMKPSIIVFNSI 368
Query: 527 VHGLCLRGKISVAIKLYKKMRSIGLKPDGKTRALMLQHLPNDSR 658
++ L G+ +A ++Y + S GLKPD T + +L L R
Sbjct: 369 INSLGKAGEDELAFRMYHLLTSSGLKPDQYTWSALLSALYRSGR 412
>ref|XP_006338389.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29290-like
isoform X1 [Solanum tuberosum]
gi|565342514|ref|XP_006338390.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g29290-like isoform X2 [Solanum tuberosum]
gi|565342516|ref|XP_006338391.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g29290-like isoform X3 [Solanum tuberosum]
Length = 589
Score = 282 bits (722), Expect = 1e-73
Identities = 131/222 (59%), Positives = 171/222 (77%)
Frame = +2
Query: 5 NSLINCLGKAGKAELAFKVYDMLNSVGHRPDGYTWNALLCALYKSNRHADAIKLFEGIRQ 184
N +IN LGKAGK +LAF++YD++ S+GH PD YTWN+LL AL ++NR+ DAI+LFE IR
Sbjct: 367 NIVINSLGKAGKVKLAFEIYDLMKSLGHAPDVYTWNSLLNALNRANRYCDAIQLFERIRN 426
Query: 185 EQDFGLNVHLYNTTLMSCQKLGLWDRSLQILWEMENCGIEMSTVSYNHAIYACEVARKPK 364
Q LN H+YNT L SC +LGLW++++Q+LW+ME + +ST SYN I ACEVAR+PK
Sbjct: 427 IQSVILNEHIYNTVLTSCHRLGLWEKAVQVLWQMEASELPVSTASYNQVIGACEVARRPK 486
Query: 365 VALQVYWHMIEQKHTPDIFTYLSLIRSCIWGSLWNDLEEIMESVSPNSSIYNALVHGLCL 544
VALQVY+ M+ Q H+PDIFT LSL+R CIWGSL+N+ EI++ PN S+YNA + G+CL
Sbjct: 487 VALQVYYRMVRQNHSPDIFTLLSLMRVCIWGSLYNEAVEILKFSEPNGSLYNAAIQGMCL 546
Query: 545 RGKISVAIKLYKKMRSIGLKPDGKTRALMLQHLPNDSRSRRK 670
G+ +A KLY +MR L+PDGKTRA+MLQ+LP DSR RK
Sbjct: 547 TGRFDLAKKLYTEMRERSLQPDGKTRAMMLQNLPKDSRRNRK 588
Score = 67.8 bits (164), Expect = 6e-09
Identities = 55/225 (24%), Positives = 113/225 (50%), Gaps = 7/225 (3%)
Frame = +2
Query: 5 NSLINCLGKAGKAELAFKVYDMLNSVGHRPDGYTWNALLCALYKSNRHADAIKLFEGIRQ 184
NSL++ L + G + A KV++ + + G++++ +L A+ + + AI +F +
Sbjct: 190 NSLLSSLLRNGMLDNALKVFNSMKA-SELTTGHSYSLILKAVADARGYDTAINMFRELIS 248
Query: 185 EQDFG--LNVHLYNTTLMSCQKLGLWDRSLQILWEMENCGIEMSTVSYNHAIYACEVARK 358
++ +++ +YNT + K WD++ +I ++ G +TV+Y I +
Sbjct: 249 SRNLREQIDIIVYNTMISIFAKANNWDQAQKIWKILQYNGQVGTTVTYRLLICTFVRCGQ 308
Query: 359 PKVALQVYWHMIEQKHTPDIFTYLSLI----RSCIWGSLWNDLEEIMES-VSPNSSIYNA 523
++A+ Y MI +P+ T ++I R + S N L+ +++S + PN+ N
Sbjct: 309 NELAIDAYSEMIHNGLSPESDTMHAIIGAYSREGKYDSALNILQCMLDSELKPNARACNI 368
Query: 524 LVHGLCLRGKISVAIKLYKKMRSIGLKPDGKTRALMLQHLPNDSR 658
+++ L GK+ +A ++Y M+S+G PD T +L L +R
Sbjct: 369 VINSLGKAGKVKLAFEIYDLMKSLGHAPDVYTWNSLLNALNRANR 413
>ref|XP_003558514.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29290-like isoform 1 [Brachypodium distachyon]
gi|357113449|ref|XP_003558515.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g29290-like isoform 2 [Brachypodium distachyon]
gi|357113451|ref|XP_003558516.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g29290-like isoform 3 [Brachypodium distachyon]
Length = 574
Score = 279 bits (713), Expect = 1e-72
Identities = 131/214 (61%), Positives = 169/214 (78%)
Frame = +2
Query: 2 FNSLINCLGKAGKAELAFKVYDMLNSVGHRPDGYTWNALLCALYKSNRHADAIKLFEGIR 181
FNS+IN LGKAG+ ELAF++Y +L S G PD YTW+ALL ALY+S R DA++LF+GI+
Sbjct: 357 FNSIINSLGKAGEDELAFRMYHLLTSSGLEPDQYTWSALLSALYRSGRCWDALELFQGIK 416
Query: 182 QEQDFGLNVHLYNTTLMSCQKLGLWDRSLQILWEMENCGIEMSTVSYNHAIYACEVARKP 361
+ LN HLYN LMSC++LG W+ +LQ+LW ME +++S VSYNH I ACEVA +P
Sbjct: 417 SKHSSVLNSHLYNIALMSCERLGQWEHALQLLWMMEKNELQISVVSYNHVIRACEVACEP 476
Query: 362 KVALQVYWHMIEQKHTPDIFTYLSLIRSCIWGSLWNDLEEIMESVSPNSSIYNALVHGLC 541
KVAL+VY M ++ +PD FT+LS+IR+CIWGSLWN +E+I+E V P+SSIYN ++ GLC
Sbjct: 477 KVALKVYQRMTHERCSPDTFTHLSVIRACIWGSLWNKVEDILEEVEPDSSIYNTVIQGLC 536
Query: 542 LRGKISVAIKLYKKMRSIGLKPDGKTRALMLQHL 643
LRGKI +A K+Y KMRSIGLKPDGKTR+ MLQH+
Sbjct: 537 LRGKIRLARKVYTKMRSIGLKPDGKTRSFMLQHI 570
Score = 67.0 bits (162), Expect = 1e-08
Identities = 53/227 (23%), Positives = 106/227 (46%), Gaps = 9/227 (3%)
Frame = +2
Query: 5 NSLINCLGKAGKAELAFKVYDMLNSVGHRPDGYTWNALLCALYKSNRHADAIKLFEGIRQ 184
NSL+ + G + A K+++ + G G+T+ +L A+ + + A+++F I +
Sbjct: 181 NSLLASFVRRGYSTDAMKMFEFMKGKG-LATGHTYTLILKAVASTEGYVSALQIFSEIEE 239
Query: 185 --EQDFGLNVHLYNTTLMSCQKLGLWDRSLQILWE--MENCGIEMSTVSYNHAIYACEVA 352
E L+V +YNT + +C + W R ++ LW +EN I + ++Y+ +
Sbjct: 240 GKESRGTLDVIVYNTMISACGRAKDW-RQVEKLWRRLVEN-SISGTLMTYDLLVSTFVQC 297
Query: 353 RKPKVALQVYWHMIEQKHTPDIFTYLSLIRSCIWGSLWNDL-----EEIMESVSPNSSIY 517
+ ++A+ Y M+ P ++I SC W + + PN ++
Sbjct: 298 GQSELAIAAYQEMLLNGLNPSEDIMKAIIASCTKEGRWEFALATFRRMLSAGMKPNIIVF 357
Query: 518 NALVHGLCLRGKISVAIKLYKKMRSIGLKPDGKTRALMLQHLPNDSR 658
N++++ L G+ +A ++Y + S GL+PD T + +L L R
Sbjct: 358 NSIINSLGKAGEDELAFRMYHLLTSSGLEPDQYTWSALLSALYRSGR 404
>ref|XP_004232179.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29290-like
[Solanum lycopersicum]
Length = 585
Score = 277 bits (709), Expect = 4e-72
Identities = 128/222 (57%), Positives = 170/222 (76%)
Frame = +2
Query: 5 NSLINCLGKAGKAELAFKVYDMLNSVGHRPDGYTWNALLCALYKSNRHADAIKLFEGIRQ 184
N +IN LGKAGK +LAF++YD++ S+GH PD YTWN+LL AL ++NR+ DAI+LFE +R
Sbjct: 363 NIVINSLGKAGKVKLAFEIYDLMKSLGHAPDVYTWNSLLNALNRANRYCDAIQLFERVRN 422
Query: 185 EQDFGLNVHLYNTTLMSCQKLGLWDRSLQILWEMENCGIEMSTVSYNHAIYACEVARKPK 364
+ LN H+YNT L SC +LGLW++++Q+LW ME + +ST SYN I ACEVAR+PK
Sbjct: 423 IRSVILNEHIYNTVLTSCHRLGLWEKAVQVLWHMEASELPVSTASYNQVIGACEVARRPK 482
Query: 365 VALQVYWHMIEQKHTPDIFTYLSLIRSCIWGSLWNDLEEIMESVSPNSSIYNALVHGLCL 544
VALQVY+ M+ Q +PDIFT LSL+R CIWGSL+N+ EI++ PN S+YNA + G+CL
Sbjct: 483 VALQVYYRMVRQNRSPDIFTLLSLMRVCIWGSLYNEAVEILKFSEPNGSLYNAAIQGMCL 542
Query: 545 RGKISVAIKLYKKMRSIGLKPDGKTRALMLQHLPNDSRSRRK 670
G++ +A KLY +MR L+PDGKTRA+MLQ+LP DSR RK
Sbjct: 543 TGRLDLAKKLYTEMRERSLQPDGKTRAMMLQNLPKDSRRNRK 584
Score = 70.1 bits (170), Expect = 1e-09
Identities = 57/225 (25%), Positives = 114/225 (50%), Gaps = 7/225 (3%)
Frame = +2
Query: 5 NSLINCLGKAGKAELAFKVYDMLNSVGHRPDGYTWNALLCALYKSNRHADAIKLFEGIRQ 184
NSL++ L + G + A KV++ + + G G+T++ +L A+ + + AI +F +
Sbjct: 186 NSLLSSLLRNGMLDNALKVFNSMKASG-LTTGHTYSLILKAVADARGYDRAINMFRELIS 244
Query: 185 EQDFG--LNVHLYNTTLMSCQKLGLWDRSLQILWEMENCGIEMSTVSYNHAIYACEVARK 358
++ +++ +YNT + K WD++ +I ++ G +TV+Y I +
Sbjct: 245 SRNLREQIDIIVYNTMISIFAKANNWDQAQKIWKILQYDGQVGTTVTYRLLICTFVRCGQ 304
Query: 359 PKVALQVYWHMIEQKHTPDIFTYLSLI----RSCIWGSLWNDLEEIMES-VSPNSSIYNA 523
++A+ Y MI +P+ T ++I R + S N L+ +++S + PN+ N
Sbjct: 305 YELAIDAYSEMIHNGLSPESDTMHAIIGAYSREGKYDSALNILQCMLDSELKPNARACNI 364
Query: 524 LVHGLCLRGKISVAIKLYKKMRSIGLKPDGKTRALMLQHLPNDSR 658
+++ L GK+ +A ++Y M+S+G PD T +L L +R
Sbjct: 365 VINSLGKAGKVKLAFEIYDLMKSLGHAPDVYTWNSLLNALNRANR 409
>ref|NP_189575.2| pentatricopeptide repeat-containing protein EMB2076 [Arabidopsis
thaliana] gi|75146586|sp|Q84J46.1|PP262_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g29290; AltName: Full=Protein EMBRYO DEFECTIVE 2076
gi|28393331|gb|AAO42091.1| unknown protein [Arabidopsis
thaliana] gi|28827658|gb|AAO50673.1| unknown protein
[Arabidopsis thaliana] gi|332644042|gb|AEE77563.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 540
Score = 268 bits (684), Expect = 3e-69
Identities = 125/213 (58%), Positives = 167/213 (78%)
Frame = +2
Query: 5 NSLINCLGKAGKAELAFKVYDMLNSVGHRPDGYTWNALLCALYKSNRHADAIKLFEGIRQ 184
N+LIN LGKAGK L FKVY +L S+GH+PD YTWNALL ALYK+NR+ D ++LF+ IR
Sbjct: 323 NTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRYEDVLQLFDMIRS 382
Query: 185 EQDFGLNVHLYNTTLMSCQKLGLWDRSLQILWEMENCGIEMSTVSYNHAIYACEVARKPK 364
E LN +LYNT ++SCQKLG W++++++L+EME G+ +ST SYN I ACE +RK K
Sbjct: 383 ENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSK 442
Query: 365 VALQVYWHMIEQKHTPDIFTYLSLIRSCIWGSLWNDLEEIMESVSPNSSIYNALVHGLCL 544
VAL VY HM ++ P+ FTYLSL+RSCIWGSLW+++E+I++ V P+ S+YNA +HG+CL
Sbjct: 443 VALLVYEHMAQRDCKPNTFTYLSLVRSCIWGSLWDEVEDILKKVEPDVSLYNAAIHGMCL 502
Query: 545 RGKISVAIKLYKKMRSIGLKPDGKTRALMLQHL 643
R + A +LY KMR +GL+PDGKTRA+MLQ+L
Sbjct: 503 RREFKFAKELYVKMREMGLEPDGKTRAMMLQNL 535