BLASTX nr result
ID: Zingiber25_contig00025431
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00025431
(467 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMT03442.1| hypothetical protein F775_08416 [Aegilops tauschii] 158 6e-37
gb|EMS47478.1| hypothetical protein TRIUR3_21614 [Triticum urartu] 158 6e-37
gb|EEC75511.1| hypothetical protein OsI_12113 [Oryza sativa Indi... 154 1e-35
gb|AAP20836.1| hypothetical protein Os03g31010 [Oryza sativa Jap... 154 1e-35
gb|ABF96692.1| expressed protein [Oryza sativa Japonica Group] 153 3e-35
emb|CBI18432.3| unnamed protein product [Vitis vinifera] 152 6e-35
ref|XP_004957634.1| PREDICTED: mediator of RNA polymerase II tra... 151 8e-35
ref|XP_002460657.1| hypothetical protein SORBIDRAFT_02g032680 [S... 149 3e-34
ref|XP_004170275.1| PREDICTED: mediator of RNA polymerase II tra... 148 8e-34
ref|XP_004144418.1| PREDICTED: mediator of RNA polymerase II tra... 148 8e-34
gb|EMJ23231.1| hypothetical protein PRUPE_ppa003036mg [Prunus pe... 145 5e-33
tpg|DAA62573.1| TPA: hypothetical protein ZEAMMB73_419772 [Zea m... 144 9e-33
ref|XP_002513321.1| conserved hypothetical protein [Ricinus comm... 144 2e-32
ref|XP_003578637.1| PREDICTED: uncharacterized protein LOC100840... 143 2e-32
ref|XP_003578636.1| PREDICTED: uncharacterized protein LOC100840... 143 2e-32
ref|XP_004296540.1| PREDICTED: mediator of RNA polymerase II tra... 142 3e-32
ref|XP_006465187.1| PREDICTED: mediator of RNA polymerase II tra... 142 5e-32
ref|XP_006465185.1| PREDICTED: mediator of RNA polymerase II tra... 142 5e-32
ref|XP_006427784.1| hypothetical protein CICLE_v10025265mg [Citr... 142 5e-32
ref|XP_006427783.1| hypothetical protein CICLE_v10025265mg [Citr... 142 5e-32
>gb|EMT03442.1| hypothetical protein F775_08416 [Aegilops tauschii]
Length = 676
Score = 158 bits (400), Expect = 6e-37
Identities = 84/131 (64%), Positives = 95/131 (72%), Gaps = 7/131 (5%)
Frame = +3
Query: 3 LDKVQAAKIQEQENLLRAAVNLGEGLRIPFDQRQLPTSLPSHLADVLSFGDGAQNLADNS 182
LDK QAAKIQEQE+LLRAAVN GEGLR+ DQRQ+ +SLPSHL +VL+ GDGA N DNS
Sbjct: 193 LDKAQAAKIQEQESLLRAAVNYGEGLRVSGDQRQMHSSLPSHLMEVLATGDGAHNFGDNS 252
Query: 183 GSCEKNTPAFSSTR-----EVLQTPGGQLIARSVPSPSNATA--FDNPSTPPMAYANSPR 341
G+ KNTPAFS +Q GGQL+ RS PSP A F+N STPPM YANSPR
Sbjct: 253 GAYPKNTPAFSPNNVNAQGNPMQASGGQLLGRSAPSPGTAGTPNFENVSTPPMPYANSPR 312
Query: 342 SDPNIMNTPSP 374
S N+MNTPSP
Sbjct: 313 SGTNMMNTPSP 323
>gb|EMS47478.1| hypothetical protein TRIUR3_21614 [Triticum urartu]
Length = 577
Score = 158 bits (400), Expect = 6e-37
Identities = 84/131 (64%), Positives = 95/131 (72%), Gaps = 7/131 (5%)
Frame = +3
Query: 3 LDKVQAAKIQEQENLLRAAVNLGEGLRIPFDQRQLPTSLPSHLADVLSFGDGAQNLADNS 182
LDK QAAKIQEQE+LLRAAVN GEGLR+ DQRQ+ +SLPSHL +VL+ GDGA N DNS
Sbjct: 193 LDKAQAAKIQEQESLLRAAVNYGEGLRVSGDQRQMHSSLPSHLMEVLATGDGAHNFGDNS 252
Query: 183 GSCEKNTPAFSSTR-----EVLQTPGGQLIARSVPSPSNATA--FDNPSTPPMAYANSPR 341
G+ KNTPAFS +Q GGQL+ RS PSP A F+N STPPM YANSPR
Sbjct: 253 GAYPKNTPAFSPNNVSAQGNPMQASGGQLLGRSAPSPGTAGTPNFENVSTPPMPYANSPR 312
Query: 342 SDPNIMNTPSP 374
S N+MNTPSP
Sbjct: 313 SGTNMMNTPSP 323
>gb|EEC75511.1| hypothetical protein OsI_12113 [Oryza sativa Indica Group]
Length = 449
Score = 154 bits (389), Expect = 1e-35
Identities = 82/131 (62%), Positives = 92/131 (70%), Gaps = 7/131 (5%)
Frame = +3
Query: 3 LDKVQAAKIQEQENLLRAAVNLGEGLRIPFDQRQLPTSLPSHLADVLSFGDGAQNLADNS 182
LDK QAAKIQEQE LLRAAVN GEGLR+P DQRQ+ +SLPSHL DVL FGDGA N DNS
Sbjct: 97 LDKAQAAKIQEQEGLLRAAVNYGEGLRVPGDQRQMYSSLPSHLVDVLPFGDGAHNFGDNS 156
Query: 183 GSCEKNTPAF-----SSTREVLQTPGGQLIARSVPSP--SNATAFDNPSTPPMAYANSPR 341
G KNT F ++ +Q GGQL+ R PSP + F+N STPPM YANSPR
Sbjct: 157 GVYPKNTSTFVPNVVNAQGNPMQVSGGQLLGRPAPSPGATGTPNFENVSTPPMPYANSPR 216
Query: 342 SDPNIMNTPSP 374
S N+MNTPSP
Sbjct: 217 SGTNMMNTPSP 227
>gb|AAP20836.1| hypothetical protein Os03g31010 [Oryza sativa Japonica Group]
gi|222625154|gb|EEE59286.1| hypothetical protein
OsJ_11324 [Oryza sativa Japonica Group]
Length = 548
Score = 154 bits (389), Expect = 1e-35
Identities = 82/131 (62%), Positives = 92/131 (70%), Gaps = 7/131 (5%)
Frame = +3
Query: 3 LDKVQAAKIQEQENLLRAAVNLGEGLRIPFDQRQLPTSLPSHLADVLSFGDGAQNLADNS 182
LDK QAAKIQEQE LLRAAVN GEGLR+P DQRQ+ +SLPSHL DVL FGDGA N DNS
Sbjct: 196 LDKAQAAKIQEQEGLLRAAVNYGEGLRVPGDQRQMYSSLPSHLVDVLPFGDGAHNFGDNS 255
Query: 183 GSCEKNTPAF-----SSTREVLQTPGGQLIARSVPSP--SNATAFDNPSTPPMAYANSPR 341
G KNT F ++ +Q GGQL+ R PSP + F+N STPPM YANSPR
Sbjct: 256 GVYPKNTSTFVPNVVNAQGNPMQVSGGQLLGRPAPSPGATGTPNFENVSTPPMPYANSPR 315
Query: 342 SDPNIMNTPSP 374
S N+MNTPSP
Sbjct: 316 SGTNMMNTPSP 326
>gb|ABF96692.1| expressed protein [Oryza sativa Japonica Group]
Length = 525
Score = 153 bits (386), Expect = 3e-35
Identities = 82/132 (62%), Positives = 91/132 (68%), Gaps = 8/132 (6%)
Frame = +3
Query: 3 LDKVQAAKIQEQENLLRAAVNLGEGLRIPFDQRQLPTSLPSHLADVLSFGDGAQNLADNS 182
LDK QAAKIQEQE LLRAAVN GEGLR+P DQRQ+ +SLPSHL DVL FGDGA N DNS
Sbjct: 172 LDKAQAAKIQEQEGLLRAAVNYGEGLRVPGDQRQMYSSLPSHLVDVLPFGDGAHNFGDNS 231
Query: 183 GSCEKNTPAF------SSTREVLQTPGGQLIARSVPSP--SNATAFDNPSTPPMAYANSP 338
G KNT F + + Q GGQL+ R PSP + F+N STPPM YANSP
Sbjct: 232 GVYPKNTSTFVPNVVNAQGNPMQQVSGGQLLGRPAPSPGATGTPNFENVSTPPMPYANSP 291
Query: 339 RSDPNIMNTPSP 374
RS N+MNTPSP
Sbjct: 292 RSGTNMMNTPSP 303
>emb|CBI18432.3| unnamed protein product [Vitis vinifera]
Length = 558
Score = 152 bits (383), Expect = 6e-35
Identities = 82/130 (63%), Positives = 95/130 (73%), Gaps = 6/130 (4%)
Frame = +3
Query: 3 LDKVQAAKIQEQENLLRAAVNLGEGLRIPFDQRQLPTSLPSHLADVLSFGDGAQNLADNS 182
+DKVQAAKIQEQENLLRAAVN GE LRIP DQR++ ++LP HL DVL+ GDG Q +D S
Sbjct: 192 IDKVQAAKIQEQENLLRAAVNFGEVLRIPLDQRKITSTLPMHLVDVLTVGDGVQTFSDAS 251
Query: 183 GSCEKNTPAFSS---TREVLQTPGGQLIARSVPSPS---NATAFDNPSTPPMAYANSPRS 344
G KNTP SS T+ +LQ G QLI RS SPS AT+FDN +T P+ YANSPRS
Sbjct: 252 GMYMKNTPPQSSINATQGLLQASGAQLIGRSAASPSGPTGATSFDNTTTSPLPYANSPRS 311
Query: 345 DPNIMNTPSP 374
N+MNTPSP
Sbjct: 312 GTNMMNTPSP 321
>ref|XP_004957634.1| PREDICTED: mediator of RNA polymerase II transcription subunit
8-like [Setaria italica]
Length = 555
Score = 151 bits (382), Expect = 8e-35
Identities = 82/131 (62%), Positives = 93/131 (70%), Gaps = 7/131 (5%)
Frame = +3
Query: 3 LDKVQAAKIQEQENLLRAAVNLGEGLRIPFDQRQLPTSLPSHLADVLSFGDGAQNLADNS 182
LDK QAAKIQEQENLLRAAVN GEGLR+P DQRQ P SLPSHL +VLSFGDG Q+ DNS
Sbjct: 201 LDKAQAAKIQEQENLLRAAVNYGEGLRVPGDQRQ-PQSLPSHLVEVLSFGDGQQSFGDNS 259
Query: 183 GSCEKNTPAF-----SSTREVLQTPGGQLIARSVPSP--SNATAFDNPSTPPMAYANSPR 341
G KN+ F ++ +Q GGQL+ R PSP + F+N STPPM YANSPR
Sbjct: 260 GGYPKNSSTFTPSGVNTQGNPVQASGGQLLGRPAPSPGGTGTPNFENVSTPPMPYANSPR 319
Query: 342 SDPNIMNTPSP 374
S N+MNTPSP
Sbjct: 320 SGTNMMNTPSP 330
>ref|XP_002460657.1| hypothetical protein SORBIDRAFT_02g032680 [Sorghum bicolor]
gi|241924034|gb|EER97178.1| hypothetical protein
SORBIDRAFT_02g032680 [Sorghum bicolor]
Length = 544
Score = 149 bits (377), Expect = 3e-34
Identities = 82/129 (63%), Positives = 91/129 (70%), Gaps = 5/129 (3%)
Frame = +3
Query: 3 LDKVQAAKIQEQENLLRAAVNLGEGLRIPFDQRQLPTSLPSHLADVLSFGDGAQNLADNS 182
LDK QAAKIQEQE LLRAAVN GEGLR+P DQRQ P SLPSHL +VL GDGAQN D+S
Sbjct: 201 LDKAQAAKIQEQEGLLRAAVNYGEGLRVPGDQRQ-PQSLPSHLIEVLPLGDGAQNFGDSS 259
Query: 183 GSCEKNTPAFSS---TREVLQTPGGQLIARSVPSP--SNATAFDNPSTPPMAYANSPRSD 347
GS KNT F+ + Q GGQL+ R PSP + F+N STPPM YANSPRS
Sbjct: 260 GSYPKNTSTFAPNNVNNQGNQASGGQLLGRPAPSPGTTGTPNFENVSTPPMPYANSPRSG 319
Query: 348 PNIMNTPSP 374
N+MNTPSP
Sbjct: 320 TNMMNTPSP 328
>ref|XP_004170275.1| PREDICTED: mediator of RNA polymerase II transcription subunit
8-like, partial [Cucumis sativus]
Length = 374
Score = 148 bits (373), Expect = 8e-34
Identities = 81/131 (61%), Positives = 94/131 (71%), Gaps = 7/131 (5%)
Frame = +3
Query: 3 LDKVQAAKIQEQENLLRAAVNLGEGLRIPFDQRQLPTSLPSHLADVLSFGDGAQNLADNS 182
LDK QAAKIQEQENLLRAAVN GEGLR+P +QRQ+ +LP HL DVL+ GDG Q+ + S
Sbjct: 38 LDKAQAAKIQEQENLLRAAVNFGEGLRLPGEQRQITPTLPMHLIDVLNAGDGVQSFNETS 97
Query: 183 GSCEKNTPA----FSSTREVLQTPGGQLIARSVPSPS---NATAFDNPSTPPMAYANSPR 341
G K+TP SS V+Q PG QL+ RS SPS +AT+FDN ST PM YANSPR
Sbjct: 98 GMYAKSTPLTSNNISSQGAVIQPPGSQLVGRSAASPSGATSATSFDN-STSPMPYANSPR 156
Query: 342 SDPNIMNTPSP 374
S N+MNTPSP
Sbjct: 157 SSANVMNTPSP 167
>ref|XP_004144418.1| PREDICTED: mediator of RNA polymerase II transcription subunit
8-like [Cucumis sativus]
Length = 546
Score = 148 bits (373), Expect = 8e-34
Identities = 81/131 (61%), Positives = 94/131 (71%), Gaps = 7/131 (5%)
Frame = +3
Query: 3 LDKVQAAKIQEQENLLRAAVNLGEGLRIPFDQRQLPTSLPSHLADVLSFGDGAQNLADNS 182
LDK QAAKIQEQENLLRAAVN GEGLR+P +QRQ+ +LP HL DVL+ GDG Q+ + S
Sbjct: 193 LDKAQAAKIQEQENLLRAAVNFGEGLRLPGEQRQITPTLPMHLIDVLNAGDGVQSFNETS 252
Query: 183 GSCEKNTPA----FSSTREVLQTPGGQLIARSVPSPS---NATAFDNPSTPPMAYANSPR 341
G K+TP SS V+Q PG QL+ RS SPS +AT+FDN ST PM YANSPR
Sbjct: 253 GMYAKSTPLTSNNISSQGAVIQPPGSQLVGRSAASPSGATSATSFDN-STSPMPYANSPR 311
Query: 342 SDPNIMNTPSP 374
S N+MNTPSP
Sbjct: 312 SSANVMNTPSP 322
>gb|EMJ23231.1| hypothetical protein PRUPE_ppa003036mg [Prunus persica]
Length = 594
Score = 145 bits (366), Expect = 5e-33
Identities = 78/130 (60%), Positives = 91/130 (70%), Gaps = 6/130 (4%)
Frame = +3
Query: 3 LDKVQAAKIQEQENLLRAAVNLGEGLRIPFDQRQLPTSLPSHLADVLSFGDGAQNLADNS 182
LDK QAAKIQEQENLLRAAVN GEGLR+P DQRQ T+LP HL DVL+ GDGAQ A+ S
Sbjct: 225 LDKAQAAKIQEQENLLRAAVNFGEGLRLPVDQRQNTTALPMHLVDVLTVGDGAQPFAETS 284
Query: 183 GSCEKNTPAFSST----REVLQTPGGQLIARSVPSP--SNATAFDNPSTPPMAYANSPRS 344
G KNTP SS ++Q G QL+ R SP ++ + FDN +T P+ YANSPRS
Sbjct: 285 GMYLKNTPVSSSNLTAQSPLMQVSGSQLMGRPAASPGGTSVSNFDNTTTSPLPYANSPRS 344
Query: 345 DPNIMNTPSP 374
N+MNTPSP
Sbjct: 345 STNMMNTPSP 354
>tpg|DAA62573.1| TPA: hypothetical protein ZEAMMB73_419772 [Zea mays]
Length = 542
Score = 144 bits (364), Expect = 9e-33
Identities = 80/131 (61%), Positives = 89/131 (67%), Gaps = 7/131 (5%)
Frame = +3
Query: 3 LDKVQAAKIQEQENLLRAAVNLGEGLRIPFDQRQLPTSLPSHLADVLSFGDGAQNLADNS 182
LDK QAAKIQEQE LLRAAVN GEGLR+P DQR P SLP HL +VL GDGAQN D+S
Sbjct: 201 LDKAQAAKIQEQEGLLRAAVNYGEGLRVPGDQRH-PQSLPIHLIEVLPLGDGAQNFGDSS 259
Query: 183 GSCEKNTPAF-----SSTREVLQTPGGQLIARSVPSP--SNATAFDNPSTPPMAYANSPR 341
GS KN F +S +Q GGQL+ R PSP + F+N STPPM YANSPR
Sbjct: 260 GSYPKNMSTFAPNSVNSQGNQIQASGGQLLGRPAPSPGTTGTPNFENVSTPPMPYANSPR 319
Query: 342 SDPNIMNTPSP 374
S N+MNTPSP
Sbjct: 320 SGTNMMNTPSP 330
>ref|XP_002513321.1| conserved hypothetical protein [Ricinus communis]
gi|223547229|gb|EEF48724.1| conserved hypothetical
protein [Ricinus communis]
Length = 549
Score = 144 bits (362), Expect = 2e-32
Identities = 77/132 (58%), Positives = 92/132 (69%), Gaps = 8/132 (6%)
Frame = +3
Query: 3 LDKVQAAKIQEQENLLRAAVNLGEGLRIPFDQRQLPTSLPSHLADVLSFGDGAQNLADNS 182
LDK QAAKIQEQENLLRAAVN GEGL + DQRQ+ ++LP HLADVL+ GDG N +D++
Sbjct: 182 LDKTQAAKIQEQENLLRAAVNFGEGLGMAADQRQITSALPMHLADVLTVGDGVHNFSDSA 241
Query: 183 GSCEKNTPAFSSTR-----EVLQTPGGQLIARSVPSPS---NATAFDNPSTPPMAYANSP 338
G K+TP SS +LQ G L+ RS SPS N T+FDN +T P+ YANSP
Sbjct: 242 GMYMKSTPPLSSNSINNQGPLLQASGSALMGRSAASPSAGTNTTSFDNTTTSPLPYANSP 301
Query: 339 RSDPNIMNTPSP 374
RS N+MNTPSP
Sbjct: 302 RSGTNMMNTPSP 313
>ref|XP_003578637.1| PREDICTED: uncharacterized protein LOC100840976 isoform 2
[Brachypodium distachyon]
Length = 544
Score = 143 bits (361), Expect = 2e-32
Identities = 80/131 (61%), Positives = 89/131 (67%), Gaps = 7/131 (5%)
Frame = +3
Query: 3 LDKVQAAKIQEQENLLRAAVNLGEGLRIPFDQRQLPTSLPSHLADVLSFGDGAQNLADNS 182
LDK QAAKIQEQE LLRAAVN GEGLR+P DQRQ +SLPSHL +VL GDGA N DNS
Sbjct: 170 LDKAQAAKIQEQEGLLRAAVNYGEGLRVPGDQRQPHSSLPSHLMEVLPSGDGAHNFGDNS 229
Query: 183 GSCEKNTPAF-----SSTREVLQTPGGQLIARSVPSPSNATA--FDNPSTPPMAYANSPR 341
G KNT F ++ +Q GG + RS PSP A F+N STPPM YANSPR
Sbjct: 230 GVYPKNTSTFTPNGVNTQGNAMQASGG--LGRSAPSPGTAGTPNFENVSTPPMPYANSPR 287
Query: 342 SDPNIMNTPSP 374
S N+MNTPSP
Sbjct: 288 SGTNMMNTPSP 298
>ref|XP_003578636.1| PREDICTED: uncharacterized protein LOC100840976 isoform 1
[Brachypodium distachyon]
Length = 566
Score = 143 bits (361), Expect = 2e-32
Identities = 80/131 (61%), Positives = 89/131 (67%), Gaps = 7/131 (5%)
Frame = +3
Query: 3 LDKVQAAKIQEQENLLRAAVNLGEGLRIPFDQRQLPTSLPSHLADVLSFGDGAQNLADNS 182
LDK QAAKIQEQE LLRAAVN GEGLR+P DQRQ +SLPSHL +VL GDGA N DNS
Sbjct: 192 LDKAQAAKIQEQEGLLRAAVNYGEGLRVPGDQRQPHSSLPSHLMEVLPSGDGAHNFGDNS 251
Query: 183 GSCEKNTPAF-----SSTREVLQTPGGQLIARSVPSPSNATA--FDNPSTPPMAYANSPR 341
G KNT F ++ +Q GG + RS PSP A F+N STPPM YANSPR
Sbjct: 252 GVYPKNTSTFTPNGVNTQGNAMQASGG--LGRSAPSPGTAGTPNFENVSTPPMPYANSPR 309
Query: 342 SDPNIMNTPSP 374
S N+MNTPSP
Sbjct: 310 SGTNMMNTPSP 320
>ref|XP_004296540.1| PREDICTED: mediator of RNA polymerase II transcription subunit
8-like [Fragaria vesca subsp. vesca]
Length = 560
Score = 142 bits (359), Expect = 3e-32
Identities = 80/130 (61%), Positives = 91/130 (70%), Gaps = 6/130 (4%)
Frame = +3
Query: 3 LDKVQAAKIQEQENLLRAAVNLGEGLRIPFDQRQLPTSLPSHLADVLSFGDGAQNLADNS 182
LDK QAAKIQEQENLLRAAVN GE LR+P DQRQ P +LP HL DVLS GDG Q + S
Sbjct: 191 LDKAQAAKIQEQENLLRAAVNYGEALRLPADQRQNPPALPMHLVDVLSGGDGVQAFPEAS 250
Query: 183 GSCEKNTPAFSST----REVLQTPGGQLIARSVPSP--SNATAFDNPSTPPMAYANSPRS 344
G KNTP SS ++Q PG QL+ RS SP ++ T FDN +T P+ YANSPRS
Sbjct: 251 GMYLKNTPVSSSNLSGQSPLMQVPGSQLMGRSAASPGGTSITNFDN-TTSPLPYANSPRS 309
Query: 345 DPNIMNTPSP 374
+ NIMNTPSP
Sbjct: 310 NTNIMNTPSP 319
>ref|XP_006465187.1| PREDICTED: mediator of RNA polymerase II transcription subunit
8-like isoform X3 [Citrus sinensis]
Length = 561
Score = 142 bits (358), Expect = 5e-32
Identities = 78/132 (59%), Positives = 89/132 (67%), Gaps = 8/132 (6%)
Frame = +3
Query: 3 LDKVQAAKIQEQENLLRAAVNLGEGLRIPFDQRQLPTSLPSHLADVLSFGDGAQNLADNS 182
LDK QA KIQEQENLLRAAVN GEGLR+P DQRQ+ +LP HL D+L GDG +D S
Sbjct: 196 LDKGQALKIQEQENLLRAAVNSGEGLRLPGDQRQMTPALPMHLVDLLPVGDGVHTFSDAS 255
Query: 183 GSCEKNTPAFSSTR-----EVLQTPGGQLIARSVPSPS---NATAFDNPSTPPMAYANSP 338
G KNTP SS +LQ G QLI RS SPS +AT+FDN + P+ YANSP
Sbjct: 256 GMYMKNTPPLSSNSIGNQGNLLQASGAQLIGRSAASPSAATSATSFDNTTASPVPYANSP 315
Query: 339 RSDPNIMNTPSP 374
RS N+MNTPSP
Sbjct: 316 RSGTNMMNTPSP 327
>ref|XP_006465185.1| PREDICTED: mediator of RNA polymerase II transcription subunit
8-like isoform X1 [Citrus sinensis]
gi|568821443|ref|XP_006465186.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 8-like isoform
X2 [Citrus sinensis]
Length = 563
Score = 142 bits (358), Expect = 5e-32
Identities = 78/132 (59%), Positives = 89/132 (67%), Gaps = 8/132 (6%)
Frame = +3
Query: 3 LDKVQAAKIQEQENLLRAAVNLGEGLRIPFDQRQLPTSLPSHLADVLSFGDGAQNLADNS 182
LDK QA KIQEQENLLRAAVN GEGLR+P DQRQ+ +LP HL D+L GDG +D S
Sbjct: 196 LDKGQALKIQEQENLLRAAVNSGEGLRLPGDQRQMTPALPMHLVDLLPVGDGVHTFSDAS 255
Query: 183 GSCEKNTPAFSSTR-----EVLQTPGGQLIARSVPSPS---NATAFDNPSTPPMAYANSP 338
G KNTP SS +LQ G QLI RS SPS +AT+FDN + P+ YANSP
Sbjct: 256 GMYMKNTPPLSSNSIGNQGNLLQASGAQLIGRSAASPSAATSATSFDNTTASPVPYANSP 315
Query: 339 RSDPNIMNTPSP 374
RS N+MNTPSP
Sbjct: 316 RSGTNMMNTPSP 327
>ref|XP_006427784.1| hypothetical protein CICLE_v10025265mg [Citrus clementina]
gi|557529774|gb|ESR41024.1| hypothetical protein
CICLE_v10025265mg [Citrus clementina]
Length = 572
Score = 142 bits (358), Expect = 5e-32
Identities = 78/132 (59%), Positives = 89/132 (67%), Gaps = 8/132 (6%)
Frame = +3
Query: 3 LDKVQAAKIQEQENLLRAAVNLGEGLRIPFDQRQLPTSLPSHLADVLSFGDGAQNLADNS 182
LDK QA KIQEQENLLRAAVN GEGLR+P DQRQ+ +LP HL D+L GDG +D S
Sbjct: 198 LDKGQALKIQEQENLLRAAVNSGEGLRLPGDQRQMTPALPMHLVDLLPVGDGVHTFSDAS 257
Query: 183 GSCEKNTPAFSSTR-----EVLQTPGGQLIARSVPSPS---NATAFDNPSTPPMAYANSP 338
G KNTP SS +LQ G QLI RS SPS +AT+FDN + P+ YANSP
Sbjct: 258 GMYMKNTPPLSSNSIGNQGNLLQASGAQLIGRSAASPSAATSATSFDNTTASPVPYANSP 317
Query: 339 RSDPNIMNTPSP 374
RS N+MNTPSP
Sbjct: 318 RSGTNMMNTPSP 329
>ref|XP_006427783.1| hypothetical protein CICLE_v10025265mg [Citrus clementina]
gi|557529773|gb|ESR41023.1| hypothetical protein
CICLE_v10025265mg [Citrus clementina]
Length = 570
Score = 142 bits (358), Expect = 5e-32
Identities = 78/132 (59%), Positives = 89/132 (67%), Gaps = 8/132 (6%)
Frame = +3
Query: 3 LDKVQAAKIQEQENLLRAAVNLGEGLRIPFDQRQLPTSLPSHLADVLSFGDGAQNLADNS 182
LDK QA KIQEQENLLRAAVN GEGLR+P DQRQ+ +LP HL D+L GDG +D S
Sbjct: 198 LDKGQALKIQEQENLLRAAVNSGEGLRLPGDQRQMTPALPMHLVDLLPVGDGVHTFSDAS 257
Query: 183 GSCEKNTPAFSSTR-----EVLQTPGGQLIARSVPSPS---NATAFDNPSTPPMAYANSP 338
G KNTP SS +LQ G QLI RS SPS +AT+FDN + P+ YANSP
Sbjct: 258 GMYMKNTPPLSSNSIGNQGNLLQASGAQLIGRSAASPSAATSATSFDNTTASPVPYANSP 317
Query: 339 RSDPNIMNTPSP 374
RS N+MNTPSP
Sbjct: 318 RSGTNMMNTPSP 329