BLASTX nr result
ID: Zingiber25_contig00025318
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00025318
(458 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002532706.1| Transcription initiation factor TFIID subuni... 86 4e-15
ref|XP_002299376.1| transcription initiation factor IID 28 kDa s... 86 4e-15
ref|XP_003569565.1| PREDICTED: transcription initiation factor T... 86 7e-15
gb|EXB56450.1| Transcription initiation factor TFIID subunit 11 ... 84 1e-14
ref|XP_004969544.1| PREDICTED: transcription initiation factor T... 84 1e-14
gb|EMT32936.1| Transcription initiation factor TFIID subunit 11 ... 84 2e-14
ref|XP_002456149.1| hypothetical protein SORBIDRAFT_03g031220 [S... 84 2e-14
ref|XP_006468617.1| PREDICTED: transcription initiation factor T... 83 3e-14
ref|XP_006468615.1| PREDICTED: transcription initiation factor T... 83 3e-14
ref|XP_006644523.1| PREDICTED: transcription initiation factor T... 83 4e-14
ref|XP_006285330.1| hypothetical protein CARUB_v10006719mg [Caps... 83 4e-14
ref|NP_193761.1| TBP-associated factor 11 [Arabidopsis thaliana]... 83 4e-14
ref|NP_001043872.2| Os01g0680400 [Oryza sativa Japonica Group] g... 83 4e-14
ref|XP_002869942.1| predicted protein [Arabidopsis lyrata subsp.... 83 4e-14
gb|EEC71272.1| hypothetical protein OsI_03273 [Oryza sativa Indi... 83 4e-14
emb|CAA18253.1| putative protein [Arabidopsis thaliana] gi|72688... 83 4e-14
gb|ACN30761.1| unknown [Zea mays] 82 6e-14
ref|NP_001152593.1| transcription initiation factor TFIID subuni... 82 6e-14
ref|NP_001151617.1| transcription initiation factor TFIID subuni... 82 6e-14
ref|XP_006413886.1| hypothetical protein EUTSA_v10026240mg [Eutr... 82 7e-14
>ref|XP_002532706.1| Transcription initiation factor TFIID subunit, putative [Ricinus
communis] gi|223527552|gb|EEF29673.1| Transcription
initiation factor TFIID subunit, putative [Ricinus
communis]
Length = 205
Score = 86.3 bits (212), Expect = 4e-15
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = -1
Query: 458 RIVMTERKESGPIRPCHIREAYRRLKLEGKIPKRSVPRLFR 336
RIVMTERKESGPIRPCHIREAYRRLKLEGK+PKRSVPRLFR
Sbjct: 165 RIVMTERKESGPIRPCHIREAYRRLKLEGKVPKRSVPRLFR 205
>ref|XP_002299376.1| transcription initiation factor IID 28 kDa subunit family protein
[Populus trichocarpa] gi|222846634|gb|EEE84181.1|
transcription initiation factor IID 28 kDa subunit
family protein [Populus trichocarpa]
Length = 222
Score = 86.3 bits (212), Expect = 4e-15
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = -1
Query: 458 RIVMTERKESGPIRPCHIREAYRRLKLEGKIPKRSVPRLFR 336
RIVMTERKESGPIRPCHIREAYRRLKLEGK+PKRSVPRLFR
Sbjct: 182 RIVMTERKESGPIRPCHIREAYRRLKLEGKVPKRSVPRLFR 222
>ref|XP_003569565.1| PREDICTED: transcription initiation factor TFIID subunit 11-like
[Brachypodium distachyon]
Length = 216
Score = 85.5 bits (210), Expect = 7e-15
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = -1
Query: 458 RIVMTERKESGPIRPCHIREAYRRLKLEGKIPKRSVPRLFR 336
RIVMTERK+SGPIRPCHIREAYRRLKLEGKIPKRSVPRLFR
Sbjct: 176 RIVMTERKDSGPIRPCHIREAYRRLKLEGKIPKRSVPRLFR 216
>gb|EXB56450.1| Transcription initiation factor TFIID subunit 11 [Morus notabilis]
Length = 253
Score = 84.3 bits (207), Expect = 1e-14
Identities = 38/41 (92%), Positives = 41/41 (100%)
Frame = -1
Query: 458 RIVMTERKESGPIRPCHIREAYRRLKLEGKIPKRSVPRLFR 336
RIVM+ERKESGP+RPCHIREAYRRLKLEGK+PKRSVPRLFR
Sbjct: 213 RIVMSERKESGPVRPCHIREAYRRLKLEGKVPKRSVPRLFR 253
>ref|XP_004969544.1| PREDICTED: transcription initiation factor TFIID subunit 11-like
[Setaria italica]
Length = 207
Score = 84.3 bits (207), Expect = 1e-14
Identities = 39/41 (95%), Positives = 41/41 (100%)
Frame = -1
Query: 458 RIVMTERKESGPIRPCHIREAYRRLKLEGKIPKRSVPRLFR 336
RIVMTERK+SGPIRPCHIREAYRRLKLEGKIP+RSVPRLFR
Sbjct: 167 RIVMTERKDSGPIRPCHIREAYRRLKLEGKIPRRSVPRLFR 207
>gb|EMT32936.1| Transcription initiation factor TFIID subunit 11 [Aegilops
tauschii]
Length = 137
Score = 84.0 bits (206), Expect = 2e-14
Identities = 39/41 (95%), Positives = 41/41 (100%)
Frame = -1
Query: 458 RIVMTERKESGPIRPCHIREAYRRLKLEGKIPKRSVPRLFR 336
RIVM+ERK+SGPIRPCHIREAYRRLKLEGKIPKRSVPRLFR
Sbjct: 97 RIVMSERKDSGPIRPCHIREAYRRLKLEGKIPKRSVPRLFR 137
>ref|XP_002456149.1| hypothetical protein SORBIDRAFT_03g031220 [Sorghum bicolor]
gi|241928124|gb|EES01269.1| hypothetical protein
SORBIDRAFT_03g031220 [Sorghum bicolor]
Length = 209
Score = 84.0 bits (206), Expect = 2e-14
Identities = 38/41 (92%), Positives = 41/41 (100%)
Frame = -1
Query: 458 RIVMTERKESGPIRPCHIREAYRRLKLEGKIPKRSVPRLFR 336
R+VMTERK+SGPIRPCHIREAYRRLKLEGKIP+RSVPRLFR
Sbjct: 169 RVVMTERKDSGPIRPCHIREAYRRLKLEGKIPRRSVPRLFR 209
>ref|XP_006468617.1| PREDICTED: transcription initiation factor TFIID subunit 11-like
isoform X3 [Citrus sinensis]
Length = 210
Score = 83.2 bits (204), Expect = 3e-14
Identities = 38/41 (92%), Positives = 40/41 (97%)
Frame = -1
Query: 458 RIVMTERKESGPIRPCHIREAYRRLKLEGKIPKRSVPRLFR 336
R+VMTER ESGPIRPCHIREAYRRLKLEGK+PKRSVPRLFR
Sbjct: 170 RMVMTERNESGPIRPCHIREAYRRLKLEGKVPKRSVPRLFR 210
>ref|XP_006468615.1| PREDICTED: transcription initiation factor TFIID subunit 11-like
isoform X1 [Citrus sinensis]
Length = 216
Score = 83.2 bits (204), Expect = 3e-14
Identities = 38/41 (92%), Positives = 40/41 (97%)
Frame = -1
Query: 458 RIVMTERKESGPIRPCHIREAYRRLKLEGKIPKRSVPRLFR 336
R+VMTER ESGPIRPCHIREAYRRLKLEGK+PKRSVPRLFR
Sbjct: 176 RMVMTERNESGPIRPCHIREAYRRLKLEGKVPKRSVPRLFR 216
>ref|XP_006644523.1| PREDICTED: transcription initiation factor TFIID subunit 11-like
[Oryza brachyantha]
Length = 188
Score = 82.8 bits (203), Expect = 4e-14
Identities = 37/41 (90%), Positives = 41/41 (100%)
Frame = -1
Query: 458 RIVMTERKESGPIRPCHIREAYRRLKLEGKIPKRSVPRLFR 336
RIVMTERK+SGP+RPCHIREAYRRLKLEGKIP+R+VPRLFR
Sbjct: 148 RIVMTERKDSGPVRPCHIREAYRRLKLEGKIPRRTVPRLFR 188
>ref|XP_006285330.1| hypothetical protein CARUB_v10006719mg [Capsella rubella]
gi|482554035|gb|EOA18228.1| hypothetical protein
CARUB_v10006719mg [Capsella rubella]
Length = 208
Score = 82.8 bits (203), Expect = 4e-14
Identities = 37/41 (90%), Positives = 40/41 (97%)
Frame = -1
Query: 458 RIVMTERKESGPIRPCHIREAYRRLKLEGKIPKRSVPRLFR 336
R+VM ERKESGPIRPCHIRE+YRRLKLEGK+PKRSVPRLFR
Sbjct: 168 RVVMAERKESGPIRPCHIRESYRRLKLEGKVPKRSVPRLFR 208
>ref|NP_193761.1| TBP-associated factor 11 [Arabidopsis thaliana]
gi|75264738|sp|Q9M565.1|TAF11_ARATH RecName:
Full=Transcription initiation factor TFIID subunit 11;
AltName: Full=TBP-associated factor 11; Short=AtTAF11
gi|7638155|gb|AAF65405.1|AF238326_1 putative TATA
binding protein associated factor 24kDa subunit
[Arabidopsis thaliana]
gi|13877757|gb|AAK43956.1|AF370141_1 unknown protein
[Arabidopsis thaliana] gi|15293301|gb|AAK93761.1|
unknown protein [Arabidopsis thaliana]
gi|39545902|gb|AAR28014.1| TAF11 [Arabidopsis thaliana]
gi|332658898|gb|AEE84298.1| TBP-associated factor 11
[Arabidopsis thaliana]
Length = 210
Score = 82.8 bits (203), Expect = 4e-14
Identities = 37/41 (90%), Positives = 40/41 (97%)
Frame = -1
Query: 458 RIVMTERKESGPIRPCHIREAYRRLKLEGKIPKRSVPRLFR 336
R+VM ERKESGPIRPCHIRE+YRRLKLEGK+PKRSVPRLFR
Sbjct: 170 RVVMAERKESGPIRPCHIRESYRRLKLEGKVPKRSVPRLFR 210
>ref|NP_001043872.2| Os01g0680400 [Oryza sativa Japonica Group]
gi|56202157|dbj|BAD73490.1| transcription initiation
factor IID p30 beta chain-like [Oryza sativa Japonica
Group] gi|56202287|dbj|BAD73746.1| transcription
initiation factor IID p30 beta chain-like [Oryza sativa
Japonica Group] gi|215695424|dbj|BAG90663.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|222619047|gb|EEE55179.1| hypothetical protein
OsJ_03014 [Oryza sativa Japonica Group]
gi|255673555|dbj|BAF05786.2| Os01g0680400 [Oryza sativa
Japonica Group]
Length = 211
Score = 82.8 bits (203), Expect = 4e-14
Identities = 37/41 (90%), Positives = 41/41 (100%)
Frame = -1
Query: 458 RIVMTERKESGPIRPCHIREAYRRLKLEGKIPKRSVPRLFR 336
RIVMTERK+SGP+RPCHIREAYRRLKLEGKIP+R+VPRLFR
Sbjct: 171 RIVMTERKDSGPVRPCHIREAYRRLKLEGKIPRRTVPRLFR 211
>ref|XP_002869942.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297315778|gb|EFH46201.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 211
Score = 82.8 bits (203), Expect = 4e-14
Identities = 37/41 (90%), Positives = 40/41 (97%)
Frame = -1
Query: 458 RIVMTERKESGPIRPCHIREAYRRLKLEGKIPKRSVPRLFR 336
R+VM ERKESGPIRPCHIRE+YRRLKLEGK+PKRSVPRLFR
Sbjct: 171 RVVMAERKESGPIRPCHIRESYRRLKLEGKVPKRSVPRLFR 211
>gb|EEC71272.1| hypothetical protein OsI_03273 [Oryza sativa Indica Group]
Length = 210
Score = 82.8 bits (203), Expect = 4e-14
Identities = 37/41 (90%), Positives = 41/41 (100%)
Frame = -1
Query: 458 RIVMTERKESGPIRPCHIREAYRRLKLEGKIPKRSVPRLFR 336
RIVMTERK+SGP+RPCHIREAYRRLKLEGKIP+R+VPRLFR
Sbjct: 170 RIVMTERKDSGPVRPCHIREAYRRLKLEGKIPRRTVPRLFR 210
>emb|CAA18253.1| putative protein [Arabidopsis thaliana] gi|7268823|emb|CAB79028.1|
putative protein [Arabidopsis thaliana]
Length = 221
Score = 82.8 bits (203), Expect = 4e-14
Identities = 37/41 (90%), Positives = 40/41 (97%)
Frame = -1
Query: 458 RIVMTERKESGPIRPCHIREAYRRLKLEGKIPKRSVPRLFR 336
R+VM ERKESGPIRPCHIRE+YRRLKLEGK+PKRSVPRLFR
Sbjct: 181 RVVMAERKESGPIRPCHIRESYRRLKLEGKVPKRSVPRLFR 221
>gb|ACN30761.1| unknown [Zea mays]
Length = 203
Score = 82.4 bits (202), Expect = 6e-14
Identities = 37/41 (90%), Positives = 41/41 (100%)
Frame = -1
Query: 458 RIVMTERKESGPIRPCHIREAYRRLKLEGKIPKRSVPRLFR 336
R+VM+ERK+SGPIRPCHIREAYRRLKLEGKIP+RSVPRLFR
Sbjct: 163 RVVMSERKDSGPIRPCHIREAYRRLKLEGKIPRRSVPRLFR 203
>ref|NP_001152593.1| transcription initiation factor TFIID subunit 11 [Zea mays]
gi|195657891|gb|ACG48413.1| transcription initiation
factor TFIID subunit 11 [Zea mays]
gi|414880994|tpg|DAA58125.1| TPA: transcription
initiation factor TFIID subunit 11 [Zea mays]
Length = 205
Score = 82.4 bits (202), Expect = 6e-14
Identities = 37/41 (90%), Positives = 41/41 (100%)
Frame = -1
Query: 458 RIVMTERKESGPIRPCHIREAYRRLKLEGKIPKRSVPRLFR 336
R+VM+ERK+SGPIRPCHIREAYRRLKLEGKIP+RSVPRLFR
Sbjct: 165 RVVMSERKDSGPIRPCHIREAYRRLKLEGKIPRRSVPRLFR 205
>ref|NP_001151617.1| transcription initiation factor TFIID subunit 11 [Zea mays]
gi|195648128|gb|ACG43532.1| transcription initiation
factor TFIID subunit 11 [Zea mays]
Length = 205
Score = 82.4 bits (202), Expect = 6e-14
Identities = 37/41 (90%), Positives = 41/41 (100%)
Frame = -1
Query: 458 RIVMTERKESGPIRPCHIREAYRRLKLEGKIPKRSVPRLFR 336
R+VM+ERK+SGPIRPCHIREAYRRLKLEGKIP+RSVPRLFR
Sbjct: 165 RVVMSERKDSGPIRPCHIREAYRRLKLEGKIPRRSVPRLFR 205
>ref|XP_006413886.1| hypothetical protein EUTSA_v10026240mg [Eutrema salsugineum]
gi|557115056|gb|ESQ55339.1| hypothetical protein
EUTSA_v10026240mg [Eutrema salsugineum]
Length = 210
Score = 82.0 bits (201), Expect = 7e-14
Identities = 37/41 (90%), Positives = 40/41 (97%)
Frame = -1
Query: 458 RIVMTERKESGPIRPCHIREAYRRLKLEGKIPKRSVPRLFR 336
R+VM ERKESGPIRPCHIRE+YRRLKLEGK+PKRSVPRLFR
Sbjct: 170 RVVMGERKESGPIRPCHIRESYRRLKLEGKVPKRSVPRLFR 210