BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00025109
         (364 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMS55554.1| DNA excision repair protein ERCC-1 [Triticum urartu]    62   6e-08
ref|XP_003574205.1| PREDICTED: DNA excision repair protein ERCC-...    62   8e-08
ref|XP_006662516.1| PREDICTED: DNA excision repair protein ERCC-...    62   1e-07
dbj|BAK03390.1| predicted protein [Hordeum vulgare subsp. vulgare]     59   5e-07
gb|EEC67317.1| hypothetical protein OsI_34337 [Oryza sativa Indi...    58   1e-06
ref|NP_001065077.1| Os10g0518900 [Oryza sativa Japonica Group] g...    57   2e-06
gb|EEE51275.1| hypothetical protein OsJ_32175 [Oryza sativa Japo...    57   2e-06
gb|AAG13428.1|AC051634_9 putative nucleotide repair protein [Ory...    57   2e-06

>gb|EMS55554.1| DNA excision repair protein ERCC-1 [Triticum urartu]
          Length = 402

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 36/74 (48%), Positives = 43/74 (58%), Gaps = 19/74 (25%)
 Frame = +3

Query: 90  DGAGGDSKPKNSAGVIKIPSYQEVFG-----TAGSSTPPPHNP--------------YPS 212
           DG  G  +P +   +IKIPSYQEVFG     ++ SSTPP +NP                S
Sbjct: 2   DGEQGRQRPDSGKNLIKIPSYQEVFGNGAAASSSSSTPPSYNPPLPSAAAAAAGSSSSSS 61

Query: 213 FSEAFSFIKSSEFY 254
           FSEAFSF+KSSEFY
Sbjct: 62  FSEAFSFLKSSEFY 75


>ref|XP_003574205.1| PREDICTED: DNA excision repair protein ERCC-1-like [Brachypodium
           distachyon]
          Length = 391

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 36/73 (49%), Positives = 43/73 (58%), Gaps = 18/73 (24%)
 Frame = +3

Query: 90  DGAGGDSKPKNSAGVIKIPSYQEVFG------TAGSSTPPPHNP------------YPSF 215
           DG  G  +P +S  +IKIPSYQEVFG      ++ SS PP +NP              SF
Sbjct: 2   DGEQGHQRPVSSKNLIKIPSYQEVFGNGVSSSSSSSSKPPSYNPTLPSAAVGSSSASSSF 61

Query: 216 SEAFSFIKSSEFY 254
           SEAFSF+KSSEFY
Sbjct: 62  SEAFSFLKSSEFY 74


>ref|XP_006662516.1| PREDICTED: DNA excision repair protein ERCC-1-like [Oryza
           brachyantha]
          Length = 383

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 33/72 (45%), Positives = 45/72 (62%), Gaps = 12/72 (16%)
 Frame = +3

Query: 75  DARNNDGAGGDSKPKNSAGVIKIPSYQEVFGTAGSST--PPPHNPYP----------SFS 218
           D + ++   G  +P+    +IKIPSYQEVFG+  SS+  PP +NP P          SFS
Sbjct: 2   DGQRDEEQQGRRQPEPGKNIIKIPSYQEVFGSGASSSPAPPSYNPPPPSAATASSSSSFS 61

Query: 219 EAFSFIKSSEFY 254
           +AFSF+KS+EFY
Sbjct: 62  QAFSFLKSTEFY 73


>dbj|BAK03390.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 388

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 35/74 (47%), Positives = 42/74 (56%), Gaps = 19/74 (25%)
 Frame = +3

Query: 90  DGAGGDSKPKNSAGVIKIPSYQEVFG-----TAGSSTPPPHNP--------------YPS 212
           DG  G  +P +   +IKIPSYQEVFG     ++ SSTP  +NP                S
Sbjct: 2   DGEQGRQRPDSGKNLIKIPSYQEVFGNGAAASSSSSTPSSYNPPLPSAAAAAAGSSSSSS 61

Query: 213 FSEAFSFIKSSEFY 254
           FSEAFSF+KSSEFY
Sbjct: 62  FSEAFSFLKSSEFY 75


>gb|EEC67317.1| hypothetical protein OsI_34337 [Oryza sativa Indica Group]
          Length = 430

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 31/61 (50%), Positives = 40/61 (65%), Gaps = 13/61 (21%)
 Frame = +3

Query: 111 KPKNSAGVIKIPSYQEVFGTAGSST--PPPHNPYP-----------SFSEAFSFIKSSEF 251
           +P+    +IKIPSYQEVFG+  SS+  PP +NP P           SFS+AFSF+KS+EF
Sbjct: 60  QPEPGKNLIKIPSYQEVFGSGASSSAAPPSYNPAPTTAASSSSSSSSFSQAFSFLKSTEF 119

Query: 252 Y 254
           Y
Sbjct: 120 Y 120


>ref|NP_001065077.1| Os10g0518900 [Oryza sativa Japonica Group]
           gi|78708916|gb|ABB47891.1| DNA excision repair protein
           ERCC-1, putative, expressed [Oryza sativa Japonica
           Group] gi|113639686|dbj|BAF26991.1| Os10g0518900 [Oryza
           sativa Japonica Group] gi|215697952|dbj|BAG92132.1|
           unnamed protein product [Oryza sativa Japonica Group]
          Length = 387

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 31/61 (50%), Positives = 40/61 (65%), Gaps = 13/61 (21%)
 Frame = +3

Query: 111 KPKNSAGVIKIPSYQEVFGTAGSST--PPPHNPYP-----------SFSEAFSFIKSSEF 251
           +P+    +IKIPSYQEVFG+  SS+  PP +NP P           SFS+AFSF+KS+EF
Sbjct: 17  QPEPGKNLIKIPSYQEVFGSGASSSAAPPSYNPPPTTAASSSSSSSSFSQAFSFLKSTEF 76

Query: 252 Y 254
           Y
Sbjct: 77  Y 77


>gb|EEE51275.1| hypothetical protein OsJ_32175 [Oryza sativa Japonica Group]
          Length = 430

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 31/61 (50%), Positives = 40/61 (65%), Gaps = 13/61 (21%)
 Frame = +3

Query: 111 KPKNSAGVIKIPSYQEVFGTAGSST--PPPHNPYP-----------SFSEAFSFIKSSEF 251
           +P+    +IKIPSYQEVFG+  SS+  PP +NP P           SFS+AFSF+KS+EF
Sbjct: 60  QPEPGKNLIKIPSYQEVFGSGASSSAAPPSYNPPPTTAASSSSSSSSFSQAFSFLKSTEF 119

Query: 252 Y 254
           Y
Sbjct: 120 Y 120


>gb|AAG13428.1|AC051634_9 putative nucleotide repair protein [Oryza sativa Japonica Group]
          Length = 395

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 31/61 (50%), Positives = 40/61 (65%), Gaps = 13/61 (21%)
 Frame = +3

Query: 111 KPKNSAGVIKIPSYQEVFGTAGSST--PPPHNPYP-----------SFSEAFSFIKSSEF 251
           +P+    +IKIPSYQEVFG+  SS+  PP +NP P           SFS+AFSF+KS+EF
Sbjct: 17  QPEPGKNLIKIPSYQEVFGSGASSSAAPPSYNPPPTTAASSSSSSSSFSQAFSFLKSTEF 76

Query: 252 Y 254
           Y
Sbjct: 77  Y 77