BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00024904
         (486 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOX94571.1| RNA polymerase Rpb7 N-terminal domain-containing ...   161   7e-38
ref|XP_002281971.1| PREDICTED: DNA-directed RNA polymerase III s...   156   3e-36
ref|XP_002271507.2| PREDICTED: DNA-directed RNA polymerase III s...   155   7e-36
ref|XP_006479592.1| PREDICTED: DNA-directed RNA polymerase III s...   152   4e-35
ref|XP_006479590.1| PREDICTED: DNA-directed RNA polymerase III s...   152   4e-35
ref|XP_006443913.1| hypothetical protein CICLE_v10023915mg, part...   152   4e-35
ref|XP_002300802.1| RNA polymerase Rpb7 N-terminal domain-contai...   148   6e-34
gb|EXB26576.1| DNA-directed RNA polymerase III subunit rpc8 [Mor...   147   1e-33
ref|XP_002520987.1| DNA-directed RNA polymerase III 25 kD polype...   147   1e-33
ref|XP_003563135.1| PREDICTED: DNA-directed RNA polymerase III s...   147   1e-33
gb|EEE67155.1| hypothetical protein OsJ_24224 [Oryza sativa Japo...   147   2e-33
ref|XP_002889618.1| predicted protein [Arabidopsis lyrata subsp....   146   2e-33
ref|XP_006657688.1| PREDICTED: DNA-directed RNA polymerase III s...   146   3e-33
ref|XP_004135978.1| PREDICTED: DNA-directed RNA polymerase III s...   146   3e-33
ref|NP_001059628.1| Os07g0477000 [Oryza sativa Japonica Group] g...   146   3e-33
ref|NP_973776.1| RNA polymerase Rpb7 N-terminal domain-containin...   144   9e-33
ref|NP_172164.1| RNA polymerase Rpb7 N-terminal domain-containin...   144   9e-33
ref|XP_006305915.1| hypothetical protein CARUB_v10011131mg [Caps...   143   2e-32
dbj|BAK08181.1| predicted protein [Hordeum vulgare subsp. vulgare]    143   3e-32
ref|XP_003580811.1| PREDICTED: DNA-directed RNA polymerase III s...   142   5e-32

>gb|EOX94571.1| RNA polymerase Rpb7 N-terminal domain-containing protein [Theobroma
           cacao]
          Length = 210

 Score =  161 bits (408), Expect = 7e-38
 Identities = 83/134 (61%), Positives = 98/134 (73%), Gaps = 6/134 (4%)
 Frame = -3

Query: 385 MFYLSLIEXXXXXXXXXXXXXLVDAIKDELERLYLDKVITNLGLCISVYDIQSLEGGFIY 206
           MFYLSLIE             L +AIK ELE L+LDKVI NLGLCISVYDI+S++GGFIY
Sbjct: 1   MFYLSLIEHTLRLPPHLLNLPLDEAIKIELEALFLDKVIANLGLCISVYDIRSIKGGFIY 60

Query: 205 PGEGSSTYKVVFRLLIFRPFVGEVICAKLKASDATGLHLTLGFFNDIHVPVHLLPKESEV 26
           PG+G+STY V FRL++FRPFVGE+I AKLK SDA GL L+LGFF+DI++PVHLLP  S  
Sbjct: 61  PGDGASTYTVEFRLIVFRPFVGEIIVAKLKESDANGLRLSLGFFDDIYIPVHLLPIPSRF 120

Query: 25  GED------GIWVW 2
             D      G W+W
Sbjct: 121 ESDPNNRNQGRWIW 134


>ref|XP_002281971.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Vitis
           vinifera] gi|297735498|emb|CBI17938.3| unnamed protein
           product [Vitis vinifera]
          Length = 192

 Score =  156 bits (394), Expect = 3e-36
 Identities = 79/134 (58%), Positives = 97/134 (72%), Gaps = 6/134 (4%)
 Frame = -3

Query: 385 MFYLSLIEXXXXXXXXXXXXXLVDAIKDELERLYLDKVITNLGLCISVYDIQSLEGGFIY 206
           MFYLSLIE             L +AIK ELE L+LDKVI NLGLCISVYDI+S++GGF++
Sbjct: 1   MFYLSLIEHTLRLPPHLLDLPLNEAIKGELESLFLDKVIANLGLCISVYDIRSIDGGFVF 60

Query: 205 PGEGSSTYKVVFRLLIFRPFVGEVICAKLKASDATGLHLTLGFFNDIHVPVHLLPK---- 38
           PG+G+STY V FRL++FRPFVGE+I AKLK SDA GL L+LGFF+DI++PVHL+P     
Sbjct: 61  PGDGASTYTVEFRLVMFRPFVGEIITAKLKESDANGLRLSLGFFDDIYIPVHLMPNPCHC 120

Query: 37  --ESEVGEDGIWVW 2
               E     IW+W
Sbjct: 121 EPNPEKKGQVIWIW 134


>ref|XP_002271507.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like [Vitis
           vinifera] gi|296086693|emb|CBI32328.3| unnamed protein
           product [Vitis vinifera]
          Length = 192

 Score =  155 bits (391), Expect = 7e-36
 Identities = 77/134 (57%), Positives = 98/134 (73%), Gaps = 6/134 (4%)
 Frame = -3

Query: 385 MFYLSLIEXXXXXXXXXXXXXLVDAIKDELERLYLDKVITNLGLCISVYDIQSLEGGFIY 206
           MF+LSLIE             L +AIK ELE L+LDKV+ NLGLCISVYDI+S++GGF++
Sbjct: 1   MFFLSLIEHTLRLPPHLLDLPLNEAIKGELESLFLDKVLANLGLCISVYDIRSIDGGFVF 60

Query: 205 PGEGSSTYKVVFRLLIFRPFVGEVICAKLKASDATGLHLTLGFFNDIHVPVHLLPK---- 38
           PG+G+STY V FRL++FRPFVGE+I AKLK SDA GL L+LGFF+DI++PVHL+P     
Sbjct: 61  PGDGASTYTVEFRLVMFRPFVGEIITAKLKESDANGLQLSLGFFDDIYIPVHLMPNPCHC 120

Query: 37  --ESEVGEDGIWVW 2
             + E     IW+W
Sbjct: 121 EPDPENKSQVIWIW 134


>ref|XP_006479592.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
           isoform X3 [Citrus sinensis]
          Length = 187

 Score =  152 bits (384), Expect = 4e-35
 Identities = 78/134 (58%), Positives = 93/134 (69%), Gaps = 6/134 (4%)
 Frame = -3

Query: 385 MFYLSLIEXXXXXXXXXXXXXLVDAIKDELERLYLDKVITNLGLCISVYDIQSLEGGFIY 206
           MFYLS IE             L +AIK ELE ++LDKVI NLGLCIS+YDI+ +EGGF+Y
Sbjct: 1   MFYLSKIEHTLRLPPHLLRLPLNEAIKLELENVFLDKVIANLGLCISIYDIKEIEGGFVY 60

Query: 205 PGEGSSTYKVVFRLLIFRPFVGEVICAKLKASDATGLHLTLGFFNDIHVPVHLLPKESEV 26
           PGEG+ST+ V FRL++FRPFVGE+I AKLK SDA GL L+LGFF DI+VP HLLP  S  
Sbjct: 61  PGEGASTHTVKFRLVVFRPFVGEIIAAKLKESDANGLRLSLGFFEDIYVPSHLLPSPSRS 120

Query: 25  GEDGI------WVW 2
             D        W+W
Sbjct: 121 EPDPYGRYEVKWIW 134


>ref|XP_006479590.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
           isoform X1 [Citrus sinensis]
           gi|568851835|ref|XP_006479591.1| PREDICTED: DNA-directed
           RNA polymerase III subunit RPC8-like isoform X2 [Citrus
           sinensis]
          Length = 192

 Score =  152 bits (384), Expect = 4e-35
 Identities = 78/134 (58%), Positives = 93/134 (69%), Gaps = 6/134 (4%)
 Frame = -3

Query: 385 MFYLSLIEXXXXXXXXXXXXXLVDAIKDELERLYLDKVITNLGLCISVYDIQSLEGGFIY 206
           MFYLS IE             L +AIK ELE ++LDKVI NLGLCIS+YDI+ +EGGF+Y
Sbjct: 1   MFYLSKIEHTLRLPPHLLRLPLNEAIKLELENVFLDKVIANLGLCISIYDIKEIEGGFVY 60

Query: 205 PGEGSSTYKVVFRLLIFRPFVGEVICAKLKASDATGLHLTLGFFNDIHVPVHLLPKESEV 26
           PGEG+ST+ V FRL++FRPFVGE+I AKLK SDA GL L+LGFF DI+VP HLLP  S  
Sbjct: 61  PGEGASTHTVKFRLVVFRPFVGEIIAAKLKESDANGLRLSLGFFEDIYVPSHLLPSPSRS 120

Query: 25  GEDGI------WVW 2
             D        W+W
Sbjct: 121 EPDPYGRYEVKWIW 134


>ref|XP_006443913.1| hypothetical protein CICLE_v10023915mg, partial [Citrus clementina]
           gi|557546175|gb|ESR57153.1| hypothetical protein
           CICLE_v10023915mg, partial [Citrus clementina]
          Length = 178

 Score =  152 bits (384), Expect = 4e-35
 Identities = 78/134 (58%), Positives = 93/134 (69%), Gaps = 6/134 (4%)
 Frame = -3

Query: 385 MFYLSLIEXXXXXXXXXXXXXLVDAIKDELERLYLDKVITNLGLCISVYDIQSLEGGFIY 206
           MFYLS IE             L +AIK ELE ++LDKVI NLGLCIS+YDI+ +EGGF+Y
Sbjct: 1   MFYLSKIEHTLRLPPHLLRLPLNEAIKLELENVFLDKVIANLGLCISIYDIKEIEGGFVY 60

Query: 205 PGEGSSTYKVVFRLLIFRPFVGEVICAKLKASDATGLHLTLGFFNDIHVPVHLLPKESEV 26
           PGEG+ST+ V FRL++FRPFVGE+I AKLK SDA GL L+LGFF DI+VP HLLP  S  
Sbjct: 61  PGEGASTHTVKFRLVVFRPFVGEIIAAKLKESDANGLRLSLGFFEDIYVPSHLLPSPSRS 120

Query: 25  GEDGI------WVW 2
             D        W+W
Sbjct: 121 EPDPYGRYEVKWIW 134


>ref|XP_002300802.1| RNA polymerase Rpb7 N-terminal domain-containing family protein
           [Populus trichocarpa] gi|222842528|gb|EEE80075.1| RNA
           polymerase Rpb7 N-terminal domain-containing family
           protein [Populus trichocarpa]
          Length = 186

 Score =  148 bits (374), Expect = 6e-34
 Identities = 75/134 (55%), Positives = 95/134 (70%), Gaps = 6/134 (4%)
 Frame = -3

Query: 385 MFYLSLIEXXXXXXXXXXXXXLVDAIKDELERLYLDKVITNLGLCISVYDIQSLEGGFIY 206
           MFYLSLIE             L DAIK+EL+ ++LDKVI+ LGLCIS+YDI+ ++GGFI 
Sbjct: 1   MFYLSLIEHKMLLPPRLLNLPLQDAIKEELQNIFLDKVISKLGLCISIYDIRKIDGGFIS 60

Query: 205 PGEGSSTYKVVFRLLIFRPFVGEVICAKLKASDATGLHLTLGFFNDIHVPVHLLPKESEV 26
           PGEG+STY V FR+++FRPFVGE+I AKLK S A GLHL+LGFF+DI++P  L+ K S  
Sbjct: 61  PGEGASTYTVEFRMIVFRPFVGEIISAKLKESTADGLHLSLGFFDDINIPAGLIQKPSRH 120

Query: 25  GEDG------IWVW 2
             D       +WVW
Sbjct: 121 VPDPENRYKVLWVW 134


>gb|EXB26576.1| DNA-directed RNA polymerase III subunit rpc8 [Morus notabilis]
          Length = 200

 Score =  147 bits (372), Expect = 1e-33
 Identities = 75/134 (55%), Positives = 92/134 (68%), Gaps = 6/134 (4%)
 Frame = -3

Query: 385 MFYLSLIEXXXXXXXXXXXXXLVDAIKDELERLYLDKVITNLGLCISVYDIQSLEGGFIY 206
           MFYLS IE             L +AIK ELE+L+LDKVI NLGLCISVYDI S+EGGFI+
Sbjct: 1   MFYLSRIEHTLRVPPDILSRPLTEAIKVELEKLFLDKVIANLGLCISVYDIISIEGGFIF 60

Query: 205 PGEGSSTYKVVFRLLIFRPFVGEVICAKLKASDATGLHLTLGFFNDIHVPVHLLPKESEV 26
           PG+G++TY  VF +++FRPFVGE+I AK+K SDA GL LTLGFF DI++P + LP  S  
Sbjct: 61  PGDGAATYTAVFTMIMFRPFVGEIISAKVKESDANGLRLTLGFFEDIYIPANFLPDPSRP 120

Query: 25  GEDG------IWVW 2
             D        W+W
Sbjct: 121 EPDPRKRDRVTWIW 134


>ref|XP_002520987.1| DNA-directed RNA polymerase III 25 kD polypeptide, putative
           [Ricinus communis] gi|223539824|gb|EEF41404.1|
           DNA-directed RNA polymerase III 25 kD polypeptide,
           putative [Ricinus communis]
          Length = 194

 Score =  147 bits (372), Expect = 1e-33
 Identities = 74/134 (55%), Positives = 94/134 (70%), Gaps = 6/134 (4%)
 Frame = -3

Query: 385 MFYLSLIEXXXXXXXXXXXXXLVDAIKDELERLYLDKVITNLGLCISVYDIQSLEGGFIY 206
           MFYLS IE             L DA+K ELE ++LDKVI NLGLCISVYD+  ++GGFI+
Sbjct: 1   MFYLSEIEHTLRLPPSLLSLPLQDAVKKELEIIFLDKVIANLGLCISVYDVTHIDGGFIF 60

Query: 205 PGEGSSTYKVVFRLLIFRPFVGEVICAKLKASDATGLHLTLGFFNDIHVPVHLLPKESEV 26
           PG+G+STY V FR+++FRPFVGE+I AKLK S+  GL L+LGFF+DI++P H LPK S  
Sbjct: 61  PGDGASTYTVRFRIVVFRPFVGEIIVAKLKESNNDGLRLSLGFFDDIYIPSHRLPKPSYS 120

Query: 25  GED------GIWVW 2
            +D       IW+W
Sbjct: 121 QQDPENRYQAIWIW 134


>ref|XP_003563135.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
           [Brachypodium distachyon]
          Length = 200

 Score =  147 bits (371), Expect = 1e-33
 Identities = 75/127 (59%), Positives = 91/127 (71%)
 Frame = -3

Query: 385 MFYLSLIEXXXXXXXXXXXXXLVDAIKDELERLYLDKVITNLGLCISVYDIQSLEGGFIY 206
           MF LS IE             LVDAIK ELERL+LDKVITNLGLC+SVYDI ++EGGFI+
Sbjct: 1   MFVLSQIEHNLPMPPHLLSRPLVDAIKTELERLFLDKVITNLGLCVSVYDILAVEGGFIF 60

Query: 205 PGEGSSTYKVVFRLLIFRPFVGEVICAKLKASDATGLHLTLGFFNDIHVPVHLLPKESEV 26
           PGEG STYKV FRLL+FRPF+GEV+  K+   D  GL ++L FF+DI +P HL+   +  
Sbjct: 61  PGEGCSTYKVSFRLLMFRPFIGEVLVGKISGYDEKGLQVSLDFFSDICIPGHLMQYGTVR 120

Query: 25  GEDGIWV 5
           GEDG W+
Sbjct: 121 GEDGRWM 127


>gb|EEE67155.1| hypothetical protein OsJ_24224 [Oryza sativa Japonica Group]
          Length = 365

 Score =  147 bits (370), Expect = 2e-33
 Identities = 76/132 (57%), Positives = 92/132 (69%), Gaps = 1/132 (0%)
 Frame = -3

Query: 397 HFG-RMFYLSLIEXXXXXXXXXXXXXLVDAIKDELERLYLDKVITNLGLCISVYDIQSLE 221
           HF   MF LS IE             LVDAIK ELERL+LDKV+ NLGLC+SVYDI+S+E
Sbjct: 159 HFSAEMFVLSQIEHNLPMPPHLLSRPLVDAIKAELERLFLDKVVANLGLCVSVYDIRSVE 218

Query: 220 GGFIYPGEGSSTYKVVFRLLIFRPFVGEVICAKLKASDATGLHLTLGFFNDIHVPVHLLP 41
           GGFI+PGEG STYKV FRLL+FRPFVGEV+  K+   D  GLH++L FF+DI +P HL+ 
Sbjct: 219 GGFIFPGEGCSTYKVSFRLLMFRPFVGEVLVGKISGYDEKGLHVSLDFFSDISIPGHLMQ 278

Query: 40  KESEVGEDGIWV 5
             +    DG W+
Sbjct: 279 YGTARALDGRWM 290


>ref|XP_002889618.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297335460|gb|EFH65877.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 204

 Score =  146 bits (369), Expect = 2e-33
 Identities = 73/134 (54%), Positives = 94/134 (70%), Gaps = 6/134 (4%)
 Frame = -3

Query: 385 MFYLSLIEXXXXXXXXXXXXXLVDAIKDELERLYLDKVITNLGLCISVYDIQSLEGGFIY 206
           MFYLS +E             L DAIK  L+ ++LDKV+ +LGLC+SVYDI+S+EGGF+ 
Sbjct: 1   MFYLSELEHSLRVPPHLLNLPLEDAIKSVLQNVFLDKVLADLGLCVSVYDIKSIEGGFVL 60

Query: 205 PGEGSSTYKVVFRLLIFRPFVGEVICAKLKASDATGLHLTLGFFNDIHVPVHLLPKESEV 26
           PG+G++TYKV FR+++FRPFVGEVI AK K SD+ GL LTLGFF+DI+VP  L+PK +  
Sbjct: 61  PGDGAATYKVGFRIVVFRPFVGEVIAAKFKESDSNGLRLTLGFFDDIYVPAPLMPKPNRC 120

Query: 25  GEDG------IWVW 2
             D       IWVW
Sbjct: 121 EPDPYNRKQMIWVW 134


>ref|XP_006657688.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like [Oryza
           brachyantha]
          Length = 200

 Score =  146 bits (368), Expect = 3e-33
 Identities = 73/127 (57%), Positives = 90/127 (70%)
 Frame = -3

Query: 385 MFYLSLIEXXXXXXXXXXXXXLVDAIKDELERLYLDKVITNLGLCISVYDIQSLEGGFIY 206
           MF LS IE             LVDAIK ELERL+LDK++ NLGLC+SVYDI+S+EGGFI+
Sbjct: 1   MFVLSQIEHNLPMPPHVLSRPLVDAIKAELERLFLDKIVANLGLCVSVYDIRSVEGGFIF 60

Query: 205 PGEGSSTYKVVFRLLIFRPFVGEVICAKLKASDATGLHLTLGFFNDIHVPVHLLPKESEV 26
           PGEG STYKV FRLL+FRPFVGEV+  K+   D  GLH++L FF+DI +P HL+   +  
Sbjct: 61  PGEGCSTYKVSFRLLMFRPFVGEVLVGKISGYDEKGLHVSLDFFSDICIPGHLMQYGTAR 120

Query: 25  GEDGIWV 5
             DG W+
Sbjct: 121 ASDGRWM 127


>ref|XP_004135978.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
           [Cucumis sativus] gi|449523449|ref|XP_004168736.1|
           PREDICTED: DNA-directed RNA polymerase III subunit
           RPC8-like [Cucumis sativus]
          Length = 226

 Score =  146 bits (368), Expect = 3e-33
 Identities = 72/134 (53%), Positives = 94/134 (70%), Gaps = 6/134 (4%)
 Frame = -3

Query: 385 MFYLSLIEXXXXXXXXXXXXXLVDAIKDELERLYLDKVITNLGLCISVYDIQSLEGGFIY 206
           MFYLS IE             ++DAIK ELE+L++DKV+ NLGLCISVYDI+S++GGFI+
Sbjct: 1   MFYLSRIEHTLRVPPSLLNLPILDAIKGELEKLFIDKVVANLGLCISVYDIRSVDGGFIF 60

Query: 205 PGEGSSTYKVVFRLLIFRPFVGEVICAKLKASDATGLHLTLGFFNDIHVPVHLLPKESEV 26
           P +G++TYKVVF L++FRPF GEVI  K++ S+  GL ++LGFF DI+VPV L+P  SE 
Sbjct: 61  PSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRISLGFFEDIYVPVELMPSGSEF 120

Query: 25  GEDG------IWVW 2
             D        WVW
Sbjct: 121 TPDENNGGRCRWVW 134


>ref|NP_001059628.1| Os07g0477000 [Oryza sativa Japonica Group]
           gi|29837202|dbj|BAC75582.1| putative DNA-directed RNA
           polymerase III subunit 22.9 kDa polypeptide [Oryza
           sativa Japonica Group] gi|113611164|dbj|BAF21542.1|
           Os07g0477000 [Oryza sativa Japonica Group]
           gi|215765537|dbj|BAG87234.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218199590|gb|EEC82017.1| hypothetical protein
           OsI_25976 [Oryza sativa Indica Group]
          Length = 202

 Score =  146 bits (368), Expect = 3e-33
 Identities = 74/127 (58%), Positives = 90/127 (70%)
 Frame = -3

Query: 385 MFYLSLIEXXXXXXXXXXXXXLVDAIKDELERLYLDKVITNLGLCISVYDIQSLEGGFIY 206
           MF LS IE             LVDAIK ELERL+LDKV+ NLGLC+SVYDI+S+EGGFI+
Sbjct: 1   MFVLSQIEHNLPMPPHLLSRPLVDAIKAELERLFLDKVVANLGLCVSVYDIRSVEGGFIF 60

Query: 205 PGEGSSTYKVVFRLLIFRPFVGEVICAKLKASDATGLHLTLGFFNDIHVPVHLLPKESEV 26
           PGEG STYKV FRLL+FRPFVGEV+  K+   D  GLH++L FF+DI +P HL+   +  
Sbjct: 61  PGEGCSTYKVSFRLLMFRPFVGEVLVGKISGYDEKGLHVSLDFFSDISIPGHLMQYGTAR 120

Query: 25  GEDGIWV 5
             DG W+
Sbjct: 121 ALDGRWM 127


>ref|NP_973776.1| RNA polymerase Rpb7 N-terminal domain-containing protein
           [Arabidopsis thaliana] gi|332189916|gb|AEE28037.1| RNA
           polymerase Rpb7 N-terminal domain-containing protein
           [Arabidopsis thaliana]
          Length = 189

 Score =  144 bits (364), Expect = 9e-33
 Identities = 72/134 (53%), Positives = 93/134 (69%), Gaps = 6/134 (4%)
 Frame = -3

Query: 385 MFYLSLIEXXXXXXXXXXXXXLVDAIKDELERLYLDKVITNLGLCISVYDIQSLEGGFIY 206
           MFYLS +E             L DAIK  L+ ++LDKV+ +LGLC+S+YDI+S+EGGF+ 
Sbjct: 1   MFYLSELEHSLRVPPHLLNLPLEDAIKSVLQNVFLDKVLADLGLCVSIYDIKSVEGGFVL 60

Query: 205 PGEGSSTYKVVFRLLIFRPFVGEVICAKLKASDATGLHLTLGFFNDIHVPVHLLPKESEV 26
           PG+G++TYKV  R+++FRPFVGEVI AK K SDA GL LTLGFF+DI+VP  L+PK +  
Sbjct: 61  PGDGAATYKVGLRIVVFRPFVGEVIAAKFKESDANGLRLTLGFFDDIYVPAPLMPKPNRC 120

Query: 25  GEDG------IWVW 2
             D       IWVW
Sbjct: 121 EPDPYNRKQMIWVW 134


>ref|NP_172164.1| RNA polymerase Rpb7 N-terminal domain-containing protein
           [Arabidopsis thaliana]
           gi|7523702|gb|AAF63141.1|AC011001_11 hypothetical
           protein [Arabidopsis thaliana]
           gi|17529108|gb|AAL38764.1| putative RNA polymerase
           [Arabidopsis thaliana] gi|23296904|gb|AAN13199.1|
           putative RNA polymerase [Arabidopsis thaliana]
           gi|332189917|gb|AEE28038.1| RNA polymerase Rpb7
           N-terminal domain-containing protein [Arabidopsis
           thaliana]
          Length = 204

 Score =  144 bits (364), Expect = 9e-33
 Identities = 72/134 (53%), Positives = 93/134 (69%), Gaps = 6/134 (4%)
 Frame = -3

Query: 385 MFYLSLIEXXXXXXXXXXXXXLVDAIKDELERLYLDKVITNLGLCISVYDIQSLEGGFIY 206
           MFYLS +E             L DAIK  L+ ++LDKV+ +LGLC+S+YDI+S+EGGF+ 
Sbjct: 1   MFYLSELEHSLRVPPHLLNLPLEDAIKSVLQNVFLDKVLADLGLCVSIYDIKSVEGGFVL 60

Query: 205 PGEGSSTYKVVFRLLIFRPFVGEVICAKLKASDATGLHLTLGFFNDIHVPVHLLPKESEV 26
           PG+G++TYKV  R+++FRPFVGEVI AK K SDA GL LTLGFF+DI+VP  L+PK +  
Sbjct: 61  PGDGAATYKVGLRIVVFRPFVGEVIAAKFKESDANGLRLTLGFFDDIYVPAPLMPKPNRC 120

Query: 25  GEDG------IWVW 2
             D       IWVW
Sbjct: 121 EPDPYNRKQMIWVW 134


>ref|XP_006305915.1| hypothetical protein CARUB_v10011131mg [Capsella rubella]
           gi|482574626|gb|EOA38813.1| hypothetical protein
           CARUB_v10011131mg [Capsella rubella]
          Length = 199

 Score =  143 bits (361), Expect = 2e-32
 Identities = 72/134 (53%), Positives = 91/134 (67%), Gaps = 6/134 (4%)
 Frame = -3

Query: 385 MFYLSLIEXXXXXXXXXXXXXLVDAIKDELERLYLDKVITNLGLCISVYDIQSLEGGFIY 206
           MFYLS +E             L DAIK  L+ ++LDKV+ +LGLC+SVYDI+S+EGG + 
Sbjct: 1   MFYLSELEHSLRVPPHLLNLPLEDAIKSVLQNVFLDKVLVDLGLCVSVYDIKSIEGGIVL 60

Query: 205 PGEGSSTYKVVFRLLIFRPFVGEVICAKLKASDATGLHLTLGFFNDIHVPVHLLPKESEV 26
           PG+G++TYKVVFR+++FRPFVGEVI AK K SD  GL LTLGFF DI+VPV L+P  +  
Sbjct: 61  PGDGAATYKVVFRIVVFRPFVGEVIAAKFKESDTNGLRLTLGFFEDIYVPVPLIPTPNRC 120

Query: 25  GEDGI------WVW 2
             D        WVW
Sbjct: 121 EPDPYNRKQMRWVW 134


>dbj|BAK08181.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 210

 Score =  143 bits (360), Expect = 3e-32
 Identities = 72/126 (57%), Positives = 88/126 (69%)
 Frame = -3

Query: 385 MFYLSLIEXXXXXXXXXXXXXLVDAIKDELERLYLDKVITNLGLCISVYDIQSLEGGFIY 206
           MF LS IE             LVDAIK ELERL+LDKV+ NLGLC+SVYDI+ +EGGFI+
Sbjct: 1   MFVLSQIEHNLPMPPHLLNRPLVDAIKSELERLFLDKVVANLGLCVSVYDIRKVEGGFIF 60

Query: 205 PGEGSSTYKVVFRLLIFRPFVGEVICAKLKASDATGLHLTLGFFNDIHVPVHLLPKESEV 26
           PGEG STY V FRLL+FRPF+GEV+  K+   D  GL ++L FF+DI +P HL+   +  
Sbjct: 61  PGEGCSTYTVSFRLLMFRPFIGEVLVGKISGYDEKGLQVSLDFFSDICIPGHLMQFGTVR 120

Query: 25  GEDGIW 8
           GEDG W
Sbjct: 121 GEDGRW 126


>ref|XP_003580811.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
           [Brachypodium distachyon]
          Length = 200

 Score =  142 bits (358), Expect = 5e-32
 Identities = 73/127 (57%), Positives = 89/127 (70%)
 Frame = -3

Query: 385 MFYLSLIEXXXXXXXXXXXXXLVDAIKDELERLYLDKVITNLGLCISVYDIQSLEGGFIY 206
           MF LS IE             LVDAIK ELERL+LDKVI NLGLC+SVYDI ++EGGFI+
Sbjct: 1   MFVLSQIEHNLPMPPHLLSRPLVDAIKTELERLFLDKVIANLGLCVSVYDILAVEGGFIF 60

Query: 205 PGEGSSTYKVVFRLLIFRPFVGEVICAKLKASDATGLHLTLGFFNDIHVPVHLLPKESEV 26
           PGEG STYKV FRLL+FRPF+GEV+  K+   D  GL ++L F +DI +P HL+   +  
Sbjct: 61  PGEGCSTYKVSFRLLMFRPFIGEVLVGKISGYDEKGLQVSLDFSSDICIPGHLMQYGTVR 120

Query: 25  GEDGIWV 5
           GEDG W+
Sbjct: 121 GEDGRWM 127