BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00024888
         (1318 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285089.1| PREDICTED: uncharacterized protein LOC100266...   339   2e-90
ref|NP_001067381.1| Os12g0638600 [Oryza sativa Japonica Group] g...   331   5e-88
gb|EEE53678.1| hypothetical protein OsJ_37013 [Oryza sativa Japo...   331   5e-88
ref|XP_002457523.1| hypothetical protein SORBIDRAFT_03g008700 [S...   330   8e-88
ref|XP_006664786.1| PREDICTED: mediator of RNA polymerase II tra...   327   7e-87
ref|XP_004967947.1| PREDICTED: mediator of RNA polymerase II tra...   326   2e-86
ref|XP_003569428.1| PREDICTED: uncharacterized protein LOC100822...   326   2e-86
gb|EOY31012.1| RNA polymerase II transcription mediators isoform...   325   2e-86
gb|EOY31009.1| RNA polymerase II transcription mediators isoform...   325   2e-86
ref|NP_001145828.1| uncharacterized protein LOC100279335 [Zea ma...   323   8e-86
gb|EMJ05807.1| hypothetical protein PRUPE_ppa002594mg [Prunus pe...   319   2e-84
ref|XP_004300164.1| PREDICTED: mediator of RNA polymerase II tra...   318   3e-84
gb|ACN26952.1| unknown [Zea mays] gi|413926580|gb|AFW66512.1| hy...   310   7e-82
gb|EXB54541.1| hypothetical protein L484_006289 [Morus notabilis]     310   1e-81
ref|XP_006364902.1| PREDICTED: mediator of RNA polymerase II tra...   310   1e-81
ref|XP_004251571.1| PREDICTED: mediator of RNA polymerase II tra...   308   4e-81
gb|EMS61166.1| hypothetical protein TRIUR3_03686 [Triticum urartu]    305   4e-80
dbj|BAK07358.1| predicted protein [Hordeum vulgare subsp. vulgare]    303   1e-79
gb|EMT09196.1| hypothetical protein F775_08586 [Aegilops tauschii]    301   4e-79
ref|XP_006475818.1| PREDICTED: mediator of RNA polymerase II tra...   295   2e-77

>ref|XP_002285089.1| PREDICTED: uncharacterized protein LOC100266409 [Vitis vinifera]
            gi|147821405|emb|CAN63500.1| hypothetical protein
            VITISV_011675 [Vitis vinifera]
            gi|297738929|emb|CBI28174.3| unnamed protein product
            [Vitis vinifera]
          Length = 660

 Score =  339 bits (869), Expect = 2e-90
 Identities = 172/387 (44%), Positives = 245/387 (63%), Gaps = 4/387 (1%)
 Frame = +3

Query: 3    KDTHSVLHEIHQSIFLQQVFDRVKHESYSPSPGINVTGMREDFLQLAVGQDTTIYLSLVP 182
            K+THSVL E HQ+IF +QVFD V  E+++ S G+NVTG+RE++LQL +GQ  ++++SLVP
Sbjct: 272  KETHSVLREGHQAIFDEQVFDLVNREAFNSSSGVNVTGIRENYLQLNIGQGASVFMSLVP 331

Query: 183  FKKEDEFLDSMGHSQNTTNEHPHSDSSALVVINEKDVLNENNFGVPSSAGLEIYVMHIFH 362
              ++++  D MG     +   P      + + + K   ++   G P+    EIY+  +FH
Sbjct: 332  SGQDEKTADGMGMQNLESAILPMDTFDGVKLSDGKHDNDKKKSGFPNRISSEIYLKQLFH 391

Query: 363  KNSVVRLKEKKIXXXXXXXXXXXXXXXCGL-SHFCKTIAHRIFSNKVLAEIERLVSRIPF 539
            ++  VR K+K I                GL  HFC ++AHRIFS+KVL E+E LVSR+P+
Sbjct: 392  EHVFVRAKDKHISAGRTQPSSQPAKDGFGLLGHFCMSLAHRIFSSKVLMELENLVSRVPY 451

Query: 540  VQLLSHPPWHSRTSSWSLSLKFPESVFHSACLSESSNNYDAKGLIRSQLHTKIVVKDDQV 719
            + LLSHP WHSRTSSW+L +K PES FH  C + +S+ ++ K +I++   TK+V+ DD +
Sbjct: 452  LHLLSHPTWHSRTSSWTLLMKVPESSFHPGCQTRTSDIHNVKNIIKTHFRTKVVINDDCI 511

Query: 720  TVSGEGAPSTLCSFR-ISPNVSSVGSYGCXXXXXXXXXXXXXAGRIIQWLHDEALIVGMK 896
             V G+GAP+ +  F+  S +V S+  Y C             A ++I+WLH+EAL VG+K
Sbjct: 512  NVEGDGAPNVVGLFKGSSEDVCSMNRYDCDLADIPVILLQQVASQVIRWLHEEALKVGIK 571

Query: 897  VRRDFLCLYFDLDQGDMLGLVARVDPDDVNGCISWWLITEDALQDDGKFSTST--GEYKN 1070
              RDFLCL F++DQG+ML LVA V+PDD  GCISWWL+ +D   +D KF T    G  + 
Sbjct: 572  ANRDFLCLSFEMDQGEMLSLVAHVNPDDPQGCISWWLVMDDGFSEDLKFHTDAPDGGSEY 631

Query: 1071 RRFLGHLSLEALYFMLMDLVNVSTDNG 1151
            R+FLGHLSLE LY  LMDLV++    G
Sbjct: 632  RKFLGHLSLEVLYSTLMDLVSLCNGGG 658


>ref|NP_001067381.1| Os12g0638600 [Oryza sativa Japonica Group] gi|77556810|gb|ABA99606.1|
            expressed protein [Oryza sativa Japonica Group]
            gi|113649888|dbj|BAF30400.1| Os12g0638600 [Oryza sativa
            Japonica Group] gi|215694565|dbj|BAG89558.1| unnamed
            protein product [Oryza sativa Japonica Group]
            gi|218187319|gb|EEC69746.1| hypothetical protein
            OsI_39278 [Oryza sativa Indica Group]
          Length = 655

 Score =  331 bits (848), Expect = 5e-88
 Identities = 178/383 (46%), Positives = 245/383 (63%), Gaps = 5/383 (1%)
 Frame = +3

Query: 3    KDTHSVLHEIHQSIFLQQVFDRVKHESYSPSPGINVTGMREDFLQLAVGQDTTIYLSLVP 182
            K  HS+L  IH+SIF +QVFD V  E++  S GINVTGMREDFLQLA+GQ+ ++ LSL  
Sbjct: 272  KHAHSILRNIHKSIFEEQVFDMVIRETFVQSQGINVTGMREDFLQLAIGQECSLCLSLAH 331

Query: 183  FK--KEDEFLDSMGHSQNTTNEHPHSDSSALVVINEK-DVLNENNFGVPSSAGLEIYVMH 353
                 + E +D   H+ +       + +  LV +N K D L ++  G P+   LEIY++ 
Sbjct: 332  SGDGSDSEMVDHEDHANSED-----ASNLVLVTMNGKLDPLRKDVTGFPNPRSLEIYLLQ 386

Query: 354  IFHKNSVVRLKEKKIXXXXXXXXXXXXXXXCGL-SHFCKTIAHRIFSNKVLAEIERLVSR 530
            +FH+N + +++EK +                GL  HFC T+AHRIFSNKVL E+E +VSR
Sbjct: 387  LFHENILRKVREKSLNIGRYQSPAQVAGDDYGLLGHFCLTVAHRIFSNKVLVELESVVSR 446

Query: 531  IPFVQLLSHPPWHSRTSSWSLSLKFPESVFHSACLSESSNNYDAKGLIRSQLHTKIVVKD 710
            +P++ L S P WHSRTSSWSL LK P+ +  +  +++ S+N++ K   RSQ +TK++VKD
Sbjct: 447  VPYLHLRSLPTWHSRTSSWSLCLKVPQPILAADRIAKPSDNHELKYKSRSQFNTKVIVKD 506

Query: 711  DQVTVSGEGAPSTLCSFRISPNVS-SVGSYGCXXXXXXXXXXXXXAGRIIQWLHDEALIV 887
             Q+++ GEG+PS   S    P+    V SY C             A ++I WLH+EAL++
Sbjct: 507  SQISLMGEGSPSIAGSLTGKPSDGYLVNSYNCDLEDLPTMLLQQVASQVIHWLHEEALVL 566

Query: 888  GMKVRRDFLCLYFDLDQGDMLGLVARVDPDDVNGCISWWLITEDALQDDGKFSTSTGEYK 1067
            GM V RDFLCLYFDL+QG+ LGLVA VDPDD  GCISW+L T D   +DGK S  + E++
Sbjct: 567  GMNVTRDFLCLYFDLEQGETLGLVANVDPDDTCGCISWYL-TIDHPTEDGKMSADSQEFE 625

Query: 1068 NRRFLGHLSLEALYFMLMDLVNV 1136
             RRFLG++SLE LY  LMDL+N+
Sbjct: 626  KRRFLGYVSLEVLYSTLMDLINL 648


>gb|EEE53678.1| hypothetical protein OsJ_37013 [Oryza sativa Japonica Group]
          Length = 655

 Score =  331 bits (848), Expect = 5e-88
 Identities = 178/383 (46%), Positives = 245/383 (63%), Gaps = 5/383 (1%)
 Frame = +3

Query: 3    KDTHSVLHEIHQSIFLQQVFDRVKHESYSPSPGINVTGMREDFLQLAVGQDTTIYLSLVP 182
            K  HS+L  IH+SIF +QVFD V  E++  S GINVTGMREDFLQLA+GQ+ ++ LSL  
Sbjct: 272  KHAHSILRNIHKSIFEEQVFDMVIRETFVQSQGINVTGMREDFLQLAIGQECSLCLSLAH 331

Query: 183  FK--KEDEFLDSMGHSQNTTNEHPHSDSSALVVINEK-DVLNENNFGVPSSAGLEIYVMH 353
                 + E +D   H+ +       + +  LV +N K D L ++  G P+   LEIY++ 
Sbjct: 332  SGDGSDSEMVDHEDHANSED-----ASNLVLVTMNGKLDPLRKDVTGFPNPRSLEIYLLQ 386

Query: 354  IFHKNSVVRLKEKKIXXXXXXXXXXXXXXXCGL-SHFCKTIAHRIFSNKVLAEIERLVSR 530
            +FH+N + +++EK +                GL  HFC T+AHRIFSNKVL E+E +VSR
Sbjct: 387  LFHENILRKVREKSLNIGRYQSPAQVAGDDYGLLGHFCLTVAHRIFSNKVLVELESVVSR 446

Query: 531  IPFVQLLSHPPWHSRTSSWSLSLKFPESVFHSACLSESSNNYDAKGLIRSQLHTKIVVKD 710
            +P++ L S P WHSRTSSWSL LK P+ +  +  +++ S+N++ K   RSQ +TK++VKD
Sbjct: 447  VPYLHLRSLPTWHSRTSSWSLCLKVPQPILAADRIAKPSDNHELKYKSRSQFNTKVIVKD 506

Query: 711  DQVTVSGEGAPSTLCSFRISPNVS-SVGSYGCXXXXXXXXXXXXXAGRIIQWLHDEALIV 887
             Q+++ GEG+PS   S    P+    V SY C             A ++I WLH+EAL++
Sbjct: 507  SQISLMGEGSPSIAGSLTGKPSDGYLVNSYNCDLEDLPTMLLQQVASQVIHWLHEEALVL 566

Query: 888  GMKVRRDFLCLYFDLDQGDMLGLVARVDPDDVNGCISWWLITEDALQDDGKFSTSTGEYK 1067
            GM V RDFLCLYFDL+QG+ LGLVA VDPDD  GCISW+L T D   +DGK S  + E++
Sbjct: 567  GMNVTRDFLCLYFDLEQGETLGLVANVDPDDTCGCISWYL-TIDHPTEDGKMSADSQEFE 625

Query: 1068 NRRFLGHLSLEALYFMLMDLVNV 1136
             RRFLG++SLE LY  LMDL+N+
Sbjct: 626  KRRFLGYVSLEVLYSTLMDLINL 648


>ref|XP_002457523.1| hypothetical protein SORBIDRAFT_03g008700 [Sorghum bicolor]
            gi|241929498|gb|EES02643.1| hypothetical protein
            SORBIDRAFT_03g008700 [Sorghum bicolor]
          Length = 659

 Score =  330 bits (846), Expect = 8e-88
 Identities = 172/380 (45%), Positives = 245/380 (64%), Gaps = 2/380 (0%)
 Frame = +3

Query: 3    KDTHSVLHEIHQSIFLQQVFDRVKHESYSPSPGINVTGMREDFLQLAVGQDTTIYLSLVP 182
            K  HS+L +IH+SIF +QVFD V  E++  S GINVTGM EDFLQLA+GQ+ ++ LSL  
Sbjct: 277  KHAHSILRDIHKSIFEEQVFDMVIRETFVQSQGINVTGMCEDFLQLAIGQECSLCLSL-E 335

Query: 183  FKKEDEFLDSMGHSQNTTNEHPHSDSSALVVINEKDVLNENNFGVPSSAGLEIYVMHIFH 362
              +++   +++G   +   ++  +++ A+  +N K+  N++  G P+   LEIY++H+FH
Sbjct: 336  LSRQNSISETVGQEDHMDTDY--TENLAVATVNGKESSNKDVRGFPNPKCLEIYLLHMFH 393

Query: 363  KNSVVRLKEKKIXXXXXXXXXXXXXXXCGL-SHFCKTIAHRIFSNKVLAEIERLVSRIPF 539
            +N + +L+EK                 CGL SHFC T++HRIFSNKV  E+E +VSR+P+
Sbjct: 394  ENILRKLREKSRHMVRYQSSAQAAPDDCGLLSHFCMTVSHRIFSNKVHLELESVVSRVPY 453

Query: 540  VQLLSHPPWHSRTSSWSLSLKFPESVFHSACLSESSNNYDAKGLIRSQLHTKIVVKDDQV 719
            + L S P WHSRTSSWSL LK P+ +  +  + + S+++  K   RSQ  TK+++KD Q+
Sbjct: 454  LHLCSLPTWHSRTSSWSLCLKVPQPILATDRVRKPSDHHKLKYKSRSQFSTKVILKDGQI 513

Query: 720  TVSGEGAPSTLCSFRISPNVSS-VGSYGCXXXXXXXXXXXXXAGRIIQWLHDEALIVGMK 896
            ++ GEG+PS   S    P+    + SY C             A ++I WLHDEA+++GM 
Sbjct: 514  SLMGEGSPSIAGSLTGKPSDGRLINSYNCDLEDLPMMLLQQVASQVIHWLHDEAMVLGMN 573

Query: 897  VRRDFLCLYFDLDQGDMLGLVARVDPDDVNGCISWWLITEDALQDDGKFSTSTGEYKNRR 1076
            V RDFLCLYFDLDQG+ LGLVA VDPDD  GCISW+L T D   ++GK S  + E + RR
Sbjct: 574  VTRDFLCLYFDLDQGETLGLVAHVDPDDTYGCISWYL-TVDHPMEEGKMSADSPELEKRR 632

Query: 1077 FLGHLSLEALYFMLMDLVNV 1136
            FLG+LSLE LY  LMDL+ +
Sbjct: 633  FLGYLSLEVLYSTLMDLIKL 652


>ref|XP_006664786.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            17-like [Oryza brachyantha]
          Length = 583

 Score =  327 bits (838), Expect = 7e-87
 Identities = 177/385 (45%), Positives = 248/385 (64%), Gaps = 7/385 (1%)
 Frame = +3

Query: 3    KDTHSVLHEIHQSIFLQQVFDRVKHESYSPSPGINVTGMREDFLQLAVGQDTTIYLSLVP 182
            K+ HS+L  IH+SIF +QVFD V  E++  S GINVTGMREDFLQL++GQ+ ++ LSL  
Sbjct: 200  KNAHSILRNIHESIFEEQVFDMVIRETFVQSQGINVTGMREDFLQLSIGQECSLCLSLA- 258

Query: 183  FKKEDEFLDS--MGHSQNTTNEHPHSDSSALVVIN---EKDVLNENNFGVPSSAGLEIYV 347
                 + +DS  +G    T +E    D+S+LV+     ++D L ++  G P+   LEIY+
Sbjct: 259  --HSGDGIDSEMVGREGRTNSE----DASSLVLATMNGKQDPLRKDVIGFPNPRSLEIYL 312

Query: 348  MHIFHKNSVVRLKEKKIXXXXXXXXXXXXXXXCGL-SHFCKTIAHRIFSNKVLAEIERLV 524
            + +FH N + +++EK +                GL  HFC T+AHRIFSNKVL E+E +V
Sbjct: 313  LQLFHANILRKVREKSLNVGRYQSPAQVAGDDYGLLGHFCMTVAHRIFSNKVLLELESVV 372

Query: 525  SRIPFVQLLSHPPWHSRTSSWSLSLKFPESVFHSACLSESSNNYDAKGLIRSQLHTKIVV 704
            S +P++ L S P WHSRTSSWSL LK P+ +  +  +++ S+N++ K   RSQ +TK++V
Sbjct: 373  SGVPYLHLRSLPTWHSRTSSWSLCLKVPQPILATDRIAKPSDNHEPKYKSRSQFNTKVIV 432

Query: 705  KDDQVTVSGEGAPSTLCSFR-ISPNVSSVGSYGCXXXXXXXXXXXXXAGRIIQWLHDEAL 881
            KD Q+++ GEG+PS   S    S +   + SY C             A ++I WLH+EAL
Sbjct: 433  KDSQISLMGEGSPSIAGSLSGKSSDGHLINSYNCDLEDLPTMLLQQVASQVIHWLHEEAL 492

Query: 882  IVGMKVRRDFLCLYFDLDQGDMLGLVARVDPDDVNGCISWWLITEDALQDDGKFSTSTGE 1061
            ++GM V RDFLCLYFDL+QG+ LGLVA VDPDD  GCISW+L T D   +DGK S  + E
Sbjct: 493  VLGMNVTRDFLCLYFDLEQGETLGLVAHVDPDDAYGCISWYL-TIDHPTEDGKMSADSYE 551

Query: 1062 YKNRRFLGHLSLEALYFMLMDLVNV 1136
            ++ RRFLG++SLE LY  LMDL+N+
Sbjct: 552  FEKRRFLGYVSLEVLYSTLMDLINL 576


>ref|XP_004967947.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            17-like [Setaria italica]
          Length = 661

 Score =  326 bits (835), Expect = 2e-86
 Identities = 172/381 (45%), Positives = 246/381 (64%), Gaps = 3/381 (0%)
 Frame = +3

Query: 3    KDTHSVLHEIHQSIFLQQVFDRVKHESYSPSPGINVTGMREDFLQLAVGQDTTIYLSLVP 182
            K  HS+L +IH+SIF +QVFD V  ++++ S GINVTGM EDFLQLA+GQ+ ++ L LVP
Sbjct: 278  KQAHSILRDIHKSIFEEQVFDMVIRDTFTQSQGINVTGMCEDFLQLAIGQECSLCLLLVP 337

Query: 183  FKKEDEFLDSMGHSQNTTNEHPHSDSSALVVINEK-DVLNENNFGVPSSAGLEIYVMHIF 359
              +  +  +++G   +  +E+  S + A+  +N K + LN++  G P+   LEIY++H+F
Sbjct: 338  SGQNSDS-ETVGQEDHMDSEY--SGNLAVATVNGKQESLNKDLRGFPNPKSLEIYLLHMF 394

Query: 360  HKNSVVRLKEKKIXXXXXXXXXXXXXXXCGL-SHFCKTIAHRIFSNKVLAEIERLVSRIP 536
            H+  V +++EK                 CGL  HFC T+AHRIFSNKV  E+E +VSR+P
Sbjct: 395  HEKIVRKIREKSRFVVRYQSPAQIAPEECGLLGHFCMTVAHRIFSNKVHLELESVVSRVP 454

Query: 537  FVQLLSHPPWHSRTSSWSLSLKFPESVFHSACLSESSNNYDAKGLIRSQLHTKIVVKDDQ 716
            ++ L S P WHSRTSSWSL LK P+ +  +  +++ S+ ++ +   RSQ +TK+++KD Q
Sbjct: 455  YLHLCSLPTWHSRTSSWSLCLKVPQPILAADRITKPSDVHEPRYKSRSQFNTKVILKDGQ 514

Query: 717  VTVSGEGAPSTLCSFRISPNVSS-VGSYGCXXXXXXXXXXXXXAGRIIQWLHDEALIVGM 893
            +++ GEG+PS   S    P+    + SY C             A ++I WLH+EA+++GM
Sbjct: 515  ISLMGEGSPSIAGSLTGKPSDGRLINSYNCDLEDLPMMLLQQVASQVIHWLHEEAMVLGM 574

Query: 894  KVRRDFLCLYFDLDQGDMLGLVARVDPDDVNGCISWWLITEDALQDDGKFSTSTGEYKNR 1073
             V RDFLCLYFDLDQG+ LGLVA VDPDD  GCISW+L T D   ++GK S    E + R
Sbjct: 575  NVTRDFLCLYFDLDQGETLGLVAHVDPDDAYGCISWYL-TVDHPTEEGKMSADNLELEKR 633

Query: 1074 RFLGHLSLEALYFMLMDLVNV 1136
            RFLG+LSLE LY  LMDL+ +
Sbjct: 634  RFLGYLSLEVLYSTLMDLIKL 654


>ref|XP_003569428.1| PREDICTED: uncharacterized protein LOC100822959 [Brachypodium
            distachyon]
          Length = 656

 Score =  326 bits (835), Expect = 2e-86
 Identities = 178/382 (46%), Positives = 238/382 (62%), Gaps = 4/382 (1%)
 Frame = +3

Query: 3    KDTHSVLHEIHQSIFLQQVFDRVKHESYSPSPGINVTGMREDFLQLAVGQDTTIYLSLVP 182
            K  HS+L  IH+SIF +QVFD V  E++ PS GINVTGMREDFLQLA+GQ+  + LSL  
Sbjct: 274  KHAHSILRNIHKSIFEEQVFDMVIRETFVPSQGINVTGMREDFLQLAIGQENLLCLSL-- 331

Query: 183  FKKEDEFLDSMGHSQNTTNEHPHSDSSALVV--INEKDVLNENNFGVPSSAGLEIYVMHI 356
               E   LD+    +         D+S LV+  IN K   ++ +    +   LEIY++H+
Sbjct: 332  ---EHSGLDTDSEMEGLEEPTDSEDASNLVLATINGKQEPSKMDASGLNPKSLEIYLLHM 388

Query: 357  FHKNSVVRLKEKKIXXXXXXXXXXXXXXXCGL-SHFCKTIAHRIFSNKVLAEIERLVSRI 533
            FH+N + +++EK                 C L  HFC T+AHRIFSNKV  E+E +VSR+
Sbjct: 389  FHENILRKVREKYRNIVRYPSPAQAAGDDCNLLGHFCMTVAHRIFSNKVHLELESVVSRV 448

Query: 534  PFVQLLSHPPWHSRTSSWSLSLKFPESVFHSACLSESSNNYDAKGLIRSQLHTKIVVKDD 713
            P++ L S P WHSRTSSWSL L+ P+ +  +  +++  +N + K   RSQ +TK+++KD 
Sbjct: 449  PYLHLQSLPTWHSRTSSWSLCLRVPQPILAADRVTKPLDNDEPKYKSRSQFNTKVILKDG 508

Query: 714  QVTVSGEGAPSTLCSFRISPNVS-SVGSYGCXXXXXXXXXXXXXAGRIIQWLHDEALIVG 890
            Q+++ GEG+PS   S    P+    + SY C             A ++I WLH+EAL++G
Sbjct: 509  QISLMGEGSPSIAGSLTRKPSDGYLINSYNCDLEDLPTMLLQQVASQVINWLHEEALVLG 568

Query: 891  MKVRRDFLCLYFDLDQGDMLGLVARVDPDDVNGCISWWLITEDALQDDGKFSTSTGEYKN 1070
            M V RDFLCLYFDLDQGD LGLVA VDPDD  GCISW+L T D    DGK ST   E++ 
Sbjct: 569  MNVTRDFLCLYFDLDQGDTLGLVAHVDPDDAYGCISWYL-TIDHSAKDGKMSTDNPEFEK 627

Query: 1071 RRFLGHLSLEALYFMLMDLVNV 1136
            RRFLG+LSLE LY  LMDL+N+
Sbjct: 628  RRFLGYLSLEVLYSTLMDLINL 649


>gb|EOY31012.1| RNA polymerase II transcription mediators isoform 4 [Theobroma cacao]
          Length = 556

 Score =  325 bits (834), Expect = 2e-86
 Identities = 165/387 (42%), Positives = 242/387 (62%), Gaps = 4/387 (1%)
 Frame = +3

Query: 3    KDTHSVLHEIHQSIFLQQVFDRVKHESYSPSPGINVTGMREDFLQLAVGQDTTIYLSLVP 182
            K+TH +L E+HQSIF  QVFD V  E+++ S G+NVTG+RE++LQL++GQ T++++SLVP
Sbjct: 168  KETHLLLREVHQSIFNDQVFDMVNREAFNQSAGVNVTGIRENYLQLSIGQGTSLFISLVP 227

Query: 183  FKKEDEFLDSMGHSQNTTNEHPHSDSSALVVINE-KDVLNENNFGVPSSAGLEIYVMHIF 359
              K D+      ++QN  +     DS   V   E K  + E  +G P+    EIY+  I 
Sbjct: 228  SSKGDDQAVDTANAQNLESAIVSLDSFDDVKSGEGKHDITEKKWGFPNRISCEIYLQQIV 287

Query: 360  HKNSVVRLKEKKIXXXXXXXXXXXXXXXCGLSHFCKTIAHRIFSNKVLAEIERLVSRIPF 539
            H+++ ++ K++                   L HF  ++AHRIFSN+VL ++E +V R+P+
Sbjct: 288  HEHAFIKGKDRPNSSGTRVSGQSGKVGSGLLGHFSLSLAHRIFSNRVLMKLENVVCRVPY 347

Query: 540  VQLLSHPPWHSRTSSWSLSLKFPESVFHSACLSESSNNYDAKGLIRSQLHTKIVVKDDQV 719
            + L++HP WHSRTSSW++ +K P+S+ H    S+ S+  + K  I+SQ  TK+VV DD++
Sbjct: 348  LHLMTHPTWHSRTSSWTIFMKVPQSILHVESQSQKSDFQNMKDAIKSQFRTKVVVNDDRI 407

Query: 720  TVSGEGAPSTLCSF-RISPNVSSVGSYGCXXXXXXXXXXXXXAGRIIQWLHDEALIVGMK 896
             V GEGAP+ +  F R S ++ SV  Y C             A ++I+WLH+EAL+VG+K
Sbjct: 408  NVEGEGAPNVVGLFKRSSEDICSVNKYDCDLADLPVIILQQVASQVIRWLHEEALMVGIK 467

Query: 897  VRRDFLCLYFDLDQGDMLGLVARVDPDDVNGCISWWLITEDALQDDGK--FSTSTGEYKN 1070
              RDFLCL F+L+QG+ + LVA VDP+D+ GCISWWL+ ED   +D K     S G  + 
Sbjct: 468  TNRDFLCLTFELEQGETVSLVAHVDPEDIQGCISWWLVMEDGFAEDWKLQMDMSDGASEY 527

Query: 1071 RRFLGHLSLEALYFMLMDLVNVSTDNG 1151
            R+FLGHLSL+ LY  LMDLV++    G
Sbjct: 528  RKFLGHLSLDVLYSTLMDLVSLCGGGG 554


>gb|EOY31009.1| RNA polymerase II transcription mediators isoform 1 [Theobroma cacao]
            gi|508783754|gb|EOY31010.1| RNA polymerase II
            transcription mediators isoform 1 [Theobroma cacao]
          Length = 663

 Score =  325 bits (834), Expect = 2e-86
 Identities = 165/387 (42%), Positives = 242/387 (62%), Gaps = 4/387 (1%)
 Frame = +3

Query: 3    KDTHSVLHEIHQSIFLQQVFDRVKHESYSPSPGINVTGMREDFLQLAVGQDTTIYLSLVP 182
            K+TH +L E+HQSIF  QVFD V  E+++ S G+NVTG+RE++LQL++GQ T++++SLVP
Sbjct: 275  KETHLLLREVHQSIFNDQVFDMVNREAFNQSAGVNVTGIRENYLQLSIGQGTSLFISLVP 334

Query: 183  FKKEDEFLDSMGHSQNTTNEHPHSDSSALVVINE-KDVLNENNFGVPSSAGLEIYVMHIF 359
              K D+      ++QN  +     DS   V   E K  + E  +G P+    EIY+  I 
Sbjct: 335  SSKGDDQAVDTANAQNLESAIVSLDSFDDVKSGEGKHDITEKKWGFPNRISCEIYLQQIV 394

Query: 360  HKNSVVRLKEKKIXXXXXXXXXXXXXXXCGLSHFCKTIAHRIFSNKVLAEIERLVSRIPF 539
            H+++ ++ K++                   L HF  ++AHRIFSN+VL ++E +V R+P+
Sbjct: 395  HEHAFIKGKDRPNSSGTRVSGQSGKVGSGLLGHFSLSLAHRIFSNRVLMKLENVVCRVPY 454

Query: 540  VQLLSHPPWHSRTSSWSLSLKFPESVFHSACLSESSNNYDAKGLIRSQLHTKIVVKDDQV 719
            + L++HP WHSRTSSW++ +K P+S+ H    S+ S+  + K  I+SQ  TK+VV DD++
Sbjct: 455  LHLMTHPTWHSRTSSWTIFMKVPQSILHVESQSQKSDFQNMKDAIKSQFRTKVVVNDDRI 514

Query: 720  TVSGEGAPSTLCSF-RISPNVSSVGSYGCXXXXXXXXXXXXXAGRIIQWLHDEALIVGMK 896
             V GEGAP+ +  F R S ++ SV  Y C             A ++I+WLH+EAL+VG+K
Sbjct: 515  NVEGEGAPNVVGLFKRSSEDICSVNKYDCDLADLPVIILQQVASQVIRWLHEEALMVGIK 574

Query: 897  VRRDFLCLYFDLDQGDMLGLVARVDPDDVNGCISWWLITEDALQDDGK--FSTSTGEYKN 1070
              RDFLCL F+L+QG+ + LVA VDP+D+ GCISWWL+ ED   +D K     S G  + 
Sbjct: 575  TNRDFLCLTFELEQGETVSLVAHVDPEDIQGCISWWLVMEDGFAEDWKLQMDMSDGASEY 634

Query: 1071 RRFLGHLSLEALYFMLMDLVNVSTDNG 1151
            R+FLGHLSL+ LY  LMDLV++    G
Sbjct: 635  RKFLGHLSLDVLYSTLMDLVSLCGGGG 661


>ref|NP_001145828.1| uncharacterized protein LOC100279335 [Zea mays]
            gi|194704804|gb|ACF86486.1| unknown [Zea mays]
            gi|219884585|gb|ACL52667.1| unknown [Zea mays]
            gi|413947117|gb|AFW79766.1| hypothetical protein
            ZEAMMB73_523859 [Zea mays]
          Length = 661

 Score =  323 bits (829), Expect = 8e-86
 Identities = 173/382 (45%), Positives = 242/382 (63%), Gaps = 7/382 (1%)
 Frame = +3

Query: 12   HSVLHEIHQSIFLQQVFDRVKHESYSPSPGINVTGMREDFLQLAVGQDTTIYLSLVPFKK 191
            HS+L +IH+SIF +QVFD V  E+++ S GINVTGM EDFLQLA+GQ+ ++ LSL     
Sbjct: 280  HSILRDIHKSIFEEQVFDMVIRETFNQSQGINVTGMCEDFLQLAIGQECSLCLSLE---- 335

Query: 192  EDEFLDSMGHSQNTTNEHPHSDSS-----ALVVINEKDVLNENNFGVPSSAGLEIYVMHI 356
                L    ++  T  +  H D++     A+  +N K+  N++  G P+   LEIY++H+
Sbjct: 336  ----LSGQNNNAGTVGQQDHMDTNYPGNLAVATVNGKESSNKDVRGFPNPKSLEIYLLHM 391

Query: 357  FHKNSVVRLKEKKIXXXXXXXXXXXXXXXCGL-SHFCKTIAHRIFSNKVLAEIERLVSRI 533
            FH+  + +L+EK                 CGL SHFC T+AHRIFSNKV  E+E +VSR+
Sbjct: 392  FHE-ILRKLREKSRHVVRYQSSAQAAPDDCGLLSHFCMTVAHRIFSNKVHLELESVVSRV 450

Query: 534  PFVQLLSHPPWHSRTSSWSLSLKFPESVFHSACLSESSNNYDAKGLIRSQLHTKIVVKDD 713
            P++ L S P WHSRTSSWSL LK P+ +  +  +++ S+ ++ K   RSQ  TK+++KD 
Sbjct: 451  PYLHLRSLPTWHSRTSSWSLCLKVPQPILATGRVTKPSDYHELKYKSRSQFSTKVILKDG 510

Query: 714  QVTVSGEGAPSTLCSFRISPNVSS-VGSYGCXXXXXXXXXXXXXAGRIIQWLHDEALIVG 890
            Q+++ GEG+PS + S    P+ S  + SY C             A ++I WLHDEA+I+G
Sbjct: 511  QISLMGEGSPSIVGSLTGKPSDSRLINSYNCDLEDLPMMLLQQVASQVIHWLHDEAMILG 570

Query: 891  MKVRRDFLCLYFDLDQGDMLGLVARVDPDDVNGCISWWLITEDALQDDGKFSTSTGEYKN 1070
            M V RDFLCLYFDL QG+ LGL+A VDPDD  GCISW+L  E  + ++GK S  + E + 
Sbjct: 571  MNVTRDFLCLYFDLGQGETLGLLAHVDPDDTYGCISWYLTVEHPM-EEGKMSAGSPESEK 629

Query: 1071 RRFLGHLSLEALYFMLMDLVNV 1136
            RRFLG+LSLE LY  LMDL+ +
Sbjct: 630  RRFLGYLSLEVLYSTLMDLIKL 651


>gb|EMJ05807.1| hypothetical protein PRUPE_ppa002594mg [Prunus persica]
          Length = 654

 Score =  319 bits (817), Expect = 2e-84
 Identities = 166/386 (43%), Positives = 236/386 (61%), Gaps = 3/386 (0%)
 Frame = +3

Query: 3    KDTHSVLHEIHQSIFLQQVFDRVKHESYSPSPGINVTGMREDFLQLAVGQDTTIYLSLVP 182
            K+THS+L E+HQ+IF +QVFD V  E+++ S G+NVTG++E++LQL +GQ T++++SLVP
Sbjct: 270  KETHSLLREVHQAIFDEQVFDLVNREAFNQSLGVNVTGIQENYLQLNIGQGTSVFISLVP 329

Query: 183  FKKEDEFLDSMGHSQNTTNEHPHSDSSALVVINEKDVLNENNFGVPSSAGLEIYVMHIFH 362
             + E + +DS           P      L +  +K    +    +P     EIY+  IFH
Sbjct: 330  SRGE-QTVDSPSTQNLENTILPLDTLDGLELAEDKPDTVKKTSLIPDQISCEIYLQQIFH 388

Query: 363  KNSVVRLKEKKIXXXXXXXXXXXXXXXCGLSHFCKTIAHRIFSNKVLAEIERLVSRIPFV 542
            ++  V+ K++                   L HFC ++AHRIFSNKVL E+E +V  +P++
Sbjct: 389  QHVFVKAKDRPTSAGARVSGQLAKEGPGLLGHFCMSLAHRIFSNKVLKELENVVKGVPYL 448

Query: 543  QLLSHPPWHSRTSSWSLSLKFPESVFHSACLSESSNNYDAKGLIRSQLHTKIVVKDDQVT 722
            QLLSHP WHSRTSSW L +K PES+ H AC + +S+    + + +SQ HTK+VV DD + 
Sbjct: 449  QLLSHPTWHSRTSSWMLFVKIPESILH-ACQTRTSDMRHMRNITKSQFHTKVVVTDDCIN 507

Query: 723  VSGEGAPSTLCSFR-ISPNVSSVGSYGCXXXXXXXXXXXXXAGRIIQWLHDEALIVGMKV 899
            V GEGAP+ +  F+  S  +  +  Y C             A ++I+WLH+EAL+VG+K 
Sbjct: 508  VEGEGAPNVVGLFKGNSEEICLMNRYDCDLADLPVIILQQVASQVIRWLHEEALMVGIKA 567

Query: 900  RRDFLCLYFDLDQGDMLGLVARVDPDDVNGCISWWLITEDALQDDGKFS--TSTGEYKNR 1073
             RDFLCL F+LD G+ L LVA VDP+D  GCISWWL+      ++ K S   S G  ++R
Sbjct: 568  NRDFLCLSFELDLGETLSLVAHVDPEDGEGCISWWLVINGGFVEERKLSMDASDGASESR 627

Query: 1074 RFLGHLSLEALYFMLMDLVNVSTDNG 1151
            +FLGHLSLE LY  LMDLV++ T  G
Sbjct: 628  KFLGHLSLEVLYSTLMDLVSLCTGRG 653


>ref|XP_004300164.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            17-like [Fragaria vesca subsp. vesca]
          Length = 655

 Score =  318 bits (815), Expect = 3e-84
 Identities = 165/382 (43%), Positives = 241/382 (63%), Gaps = 4/382 (1%)
 Frame = +3

Query: 3    KDTHSVLHEIHQSIFLQQVFDRVKHESYSPSPGINVTGMREDFLQLAVGQDTTIYLSLVP 182
            K+THS+L E+HQ+IF +QVFD V  E+ + S G+NVTG++E++LQL + QDT++++SLVP
Sbjct: 271  KETHSLLREVHQAIFSEQVFDLVNREACNQSLGVNVTGIQENYLQLNIDQDTSVFISLVP 330

Query: 183  FKKEDEFLDSMGHSQNTTNEH-PHSDSSALVVINEKDVLNENNFGVPSSAGLEIYVMHIF 359
              + +E +DS   +QN  N   P      L +  +K    +    +P+    EIY++ IF
Sbjct: 331  TNQGEETVDSPS-TQNLENAILPLDTLDGLNLPEDKPDTPKKKSIIPNQISCEIYLLQIF 389

Query: 360  HKNSVVRLKEKKIXXXXXXXXXXXXXXXCGLSHFCKTIAHRIFSNKVLAEIERLVSRIPF 539
            H++  ++ K++                   L HFC ++AHRIFSNKVL E+E +V  +P+
Sbjct: 390  HQHVFLKAKDRPTSGGGVSGQPAKEGSGL-LGHFCMSLAHRIFSNKVLMELENVVRGVPY 448

Query: 540  VQLLSHPPWHSRTSSWSLSLKFPESVFHSACLSESSNNYDAKGLIRSQLHTKIVVKDDQV 719
            +QL SHP WHSRTSSW+L +K P+S+ H AC    S+++  K + +SQ HTK+VV DD +
Sbjct: 449  MQLTSHPTWHSRTSSWTLVVKIPQSILH-ACQIRVSDSHHTKHVTKSQFHTKVVVTDDCI 507

Query: 720  TVSGEGAPSTLCSFR-ISPNVSSVGSYGCXXXXXXXXXXXXXAGRIIQWLHDEALIVGMK 896
             + GEGAP+ +  F+  S  V S+  Y C             A ++I+WLH+EAL+VG+K
Sbjct: 508  NIDGEGAPNVVGLFKGTSQEVCSMNRYDCDLADLSVIILQQVASQVIRWLHEEALMVGLK 567

Query: 897  VRRDFLCLYFDLDQGDMLGLVARVDPDDVNGCISWWLITEDALQDDGKFS--TSTGEYKN 1070
               DFLCL F+L+QG+ L LVA VDP+D  GCISWWL+ ED   ++ K +   S G  ++
Sbjct: 568  ANWDFLCLSFELEQGETLSLVAHVDPEDTEGCISWWLVMEDGFVEERKLNIDISDGASES 627

Query: 1071 RRFLGHLSLEALYFMLMDLVNV 1136
            R+FLGHLSLE LY  +MDLV +
Sbjct: 628  RKFLGHLSLEVLYSTMMDLVGL 649


>gb|ACN26952.1| unknown [Zea mays] gi|413926580|gb|AFW66512.1| hypothetical protein
            ZEAMMB73_010825 [Zea mays] gi|413926581|gb|AFW66513.1|
            hypothetical protein ZEAMMB73_010825 [Zea mays]
          Length = 660

 Score =  310 bits (795), Expect = 7e-82
 Identities = 166/382 (43%), Positives = 230/382 (60%), Gaps = 7/382 (1%)
 Frame = +3

Query: 12   HSVLHEIHQSIFLQQVFDRVKHESYSPSPGINVTGMREDFLQLAVGQDTTIYLSLVPFKK 191
            HS+L +IH+SIF +QVFD V  E++  S GINVTGM EDFLQLA+GQ+ ++ LS      
Sbjct: 280  HSILRDIHKSIFEEQVFDMVIQETFIQSQGINVTGMCEDFLQLAIGQECSLCLS------ 333

Query: 192  EDEFLDSMGHSQNTTNEHPHSD-----SSALVVINEKDVLNENNFGVPSSAGLEIYVMHI 356
                L    ++  T  +  H D     + A+  +N K+  N++  G P+   LEIY++H+
Sbjct: 334  --HDLSGQNNNSGTVGQEDHMDIDHTGNLAVATVNGKESSNKDVRGFPNPKSLEIYLLHV 391

Query: 357  FHKNSVVRLKEKKIXXXXXXXXXXXXXXXCGL-SHFCKTIAHRIFSNKVLAEIERLVSRI 533
            FH+  + +L+EK                 CGL SHFC T++HRIFS+KV  E+E +VSR+
Sbjct: 392  FHEGILRKLREKSRHVVRYQSSAQGTPDECGLLSHFCMTVSHRIFSSKVHLELESVVSRV 451

Query: 534  PFVQLLSHPPWHSRTSSWSLSLKFPESVFHSACLSESSNNYDAKGLIRSQLHTKIVVKDD 713
            P++ L S P WHSRTSSWSL LK P+ +  +  +   S+  + K   RSQ  TK+++KD 
Sbjct: 452  PYLHLCSLPTWHSRTSSWSLCLKVPQPILATDRVRRPSDYSELKCKSRSQFGTKVILKDG 511

Query: 714  QVTVSGEGAPSTLCSFRISPNVSS-VGSYGCXXXXXXXXXXXXXAGRIIQWLHDEALIVG 890
            Q+++ GEG+PS   S    P+    V SY C             A ++I WLHDEA+++G
Sbjct: 512  QISLMGEGSPSIAGSLAGKPSDGRLVNSYNCDLEDLPMMLLQQVASQVIHWLHDEAVVLG 571

Query: 891  MKVRRDFLCLYFDLDQGDMLGLVARVDPDDVNGCISWWLITEDALQDDGKFSTSTGEYKN 1070
            M    DFLCLY DLDQG+ LGLVA VDPDD  GC+SW+L  +    ++GK S  + E + 
Sbjct: 572  MNATIDFLCLYLDLDQGETLGLVAHVDPDDTYGCVSWYLTLDHHPTEEGKMSAGSPELEE 631

Query: 1071 RRFLGHLSLEALYFMLMDLVNV 1136
            RRFLG+LS E LY  LMDLV +
Sbjct: 632  RRFLGYLSPELLYSTLMDLVKL 653


>gb|EXB54541.1| hypothetical protein L484_006289 [Morus notabilis]
          Length = 701

 Score =  310 bits (793), Expect = 1e-81
 Identities = 165/387 (42%), Positives = 240/387 (62%), Gaps = 5/387 (1%)
 Frame = +3

Query: 3    KDTHSVLHEIHQSIFLQQVFDRVKHESYSPSPGINVTGMREDFLQLAVGQDTTIYLSLVP 182
            K+TH +L ++HQSIF ++VFD V  E+++ S G+NVTG+RE++LQL++G   ++++SLV 
Sbjct: 271  KETHLLLRQVHQSIFDEKVFDLVNREAFNQSLGVNVTGIRENYLQLSIGLGNSVFISLVS 330

Query: 183  FKKEDEFLDSMGHSQNTTNEHPHSDSSALVVINEKDVLNENN--FGVPSSAGLEIYVMHI 356
              ++D+  D  G+ Q+  N     DS   V + E+D  +  N   G P     EIY+  +
Sbjct: 331  SNQDDQTGDDAGN-QDIENAILPLDSLDGVKLPEEDKQDTFNKELGTPDYISCEIYLQQL 389

Query: 357  FHKNSVVRLKEKKIXXXXXXXXXXXXXXXCGLSHFCKTIAHRIFSNKVLAEIERLVSRIP 536
            FH++   R K+K +                 L HFC ++AHRIFS KVL  +E LVS + 
Sbjct: 390  FHEHVFSRAKDKPVSTVSRVSGQPAKEGPSLLGHFCLSLAHRIFSKKVLVVLENLVSGVS 449

Query: 537  FVQLLSHPPWHSRTSSWSLSLKFPESVFHSACLSESSNNYDAKGLIRSQLHTKIVVKDDQ 716
            ++QLLSHP W+SRTSSW++ +K P+S+ H     ++S+ +  K   +SQ  TK+V+KDD 
Sbjct: 450  YLQLLSHPTWNSRTSSWTIFMKIPQSILHGGS-HQTSDLHHMKSTTKSQFRTKVVIKDDF 508

Query: 717  VTVSGEGAPSTLCSFRISPN-VSSVGSYGCXXXXXXXXXXXXXAGRIIQWLHDEALIVGM 893
            ++V GEGAP+ +  F+ S   VSS+  Y C             AG+I++WLH+EAL+VG+
Sbjct: 509  ISVEGEGAPNVVGLFKGSAQEVSSMNRYECNLEDLPVIILQQVAGQIVRWLHEEALMVGI 568

Query: 894  KVRRDFLCLYFDLDQGDMLGLVARVDPDDVNGCISWWLITEDALQDDGK--FSTSTGEYK 1067
            KV RDFL L F+L+QG+ L L+A VDP+D  GCISWWL+ ED   ++GK     S G  +
Sbjct: 569  KVNRDFLSLSFELEQGETLTLLAHVDPEDAQGCISWWLVMEDGFTEEGKLHMDLSDGVSE 628

Query: 1068 NRRFLGHLSLEALYFMLMDLVNVSTDN 1148
             RRFLGHLSL+ LY  L+DLV     N
Sbjct: 629  YRRFLGHLSLDLLYSTLIDLVKTGFRN 655


>ref|XP_006364902.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            17-like [Solanum tuberosum]
          Length = 663

 Score =  310 bits (793), Expect = 1e-81
 Identities = 161/389 (41%), Positives = 242/389 (62%), Gaps = 6/389 (1%)
 Frame = +3

Query: 3    KDTHSVLHEIHQSIFLQQVFDRVKHESYSPSPGINVTGMREDFLQLAVGQDTTIYLSLVP 182
            ++THS L E+H++IF +QVFD V  E+++P+ G +VTG++E+ L+L++GQ  ++ +SLVP
Sbjct: 281  RETHSTLREVHRAIFDEQVFDLVNREAFNPALGADVTGIQENLLRLSIGQRASLSISLVP 340

Query: 183  FKKEDEFLDSMG--HSQNTTNEHPHSDSSALVVINEKDVLNENNFGVPSSAGLEIYVMHI 356
               + +  +++G  HS+         D+S L    ++   N    G P+    EIY+  +
Sbjct: 341  STDDGQTANAVGDEHSETAIVPFESVDASKL----DEGKFNFKKLGFPNRISFEIYLQQL 396

Query: 357  FHKNSVVRLKEKKIXXXXXXXXXXXXXXXCGL-SHFCKTIAHRIFSNKVLAEIERLVSRI 533
            FH++  ++ K +                   L  HFC ++AHRIFSNKVLAE+E LVSRI
Sbjct: 397  FHEHVFIKAKNRLSSLGKPQLSSQPVKDGPNLLGHFCVSLAHRIFSNKVLAELESLVSRI 456

Query: 534  PFVQLLSHPPWHSRTSSWSLSLKFPESVFHSACLSESSNNYDAKGLIRSQLHTKIVVKDD 713
            P+VQL+SHP WHSRTSSW+LS+  PES+ H+  LS SS   D    ++    TK++V+DD
Sbjct: 457  PYVQLISHPTWHSRTSSWTLSMDVPESILHAGSLSHSS---DYVKNVKFHFRTKVMVRDD 513

Query: 714  QVTVSGEGAPSTLCSFRISP-NVSSVGSYGCXXXXXXXXXXXXXAGRIIQWLHDEALIVG 890
             +++ GEGAP+ +  F+  P +   +  Y C             A ++I+WLH+EAL+VG
Sbjct: 514  CISLEGEGAPNVVGLFKGKPDSTCPMNRYDCDLSDLPMVLLQQVASQVIRWLHEEALMVG 573

Query: 891  MKVRRDFLCLYFDLDQGDMLGLVARVDPDDVNGCISWWLITEDALQDDG--KFSTSTGEY 1064
            +K  RDFL L F+L+QG+ L LVA VDP+D+ GCISWWL+  D   ++   K   ++GE 
Sbjct: 574  IKANRDFLSLSFELEQGETLSLVAHVDPEDIQGCISWWLVMGDGFSEENKLKMDVNSGES 633

Query: 1065 KNRRFLGHLSLEALYFMLMDLVNVSTDNG 1151
            + R+FLG+LSLE LY  LMD+V+VS+  G
Sbjct: 634  ETRKFLGYLSLEVLYSTLMDMVSVSSTAG 662


>ref|XP_004251571.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            17-like [Solanum lycopersicum]
          Length = 663

 Score =  308 bits (788), Expect = 4e-81
 Identities = 161/394 (40%), Positives = 244/394 (61%), Gaps = 11/394 (2%)
 Frame = +3

Query: 3    KDTHSVLHEIHQSIFLQQVFDRVKHESYSPSPGINVTGMREDFLQLAVGQDTTIYLSLVP 182
            ++THS L E+H++IF +QVFD V  E+++P+ G +VTG++E+ L+L++GQ  ++ +SLVP
Sbjct: 281  RETHSTLREVHRAIFDEQVFDLVNREAFNPALGADVTGIQENLLRLSIGQRASLSISLVP 340

Query: 183  FKKEDEFLDSMGHSQNTTNEHPHSDSSALVVINEKDV-------LNENNFGVPSSAGLEI 341
               + +  +++G      +EHP +   A+V     D        L+    G P+    EI
Sbjct: 341  SADDGQTANAVG------DEHPET---AIVPFESVDASKQDEGKLDLKKLGFPNRISFEI 391

Query: 342  YVMHIFHKNSVVRLKEKKIXXXXXXXXXXXXXXXCGL-SHFCKTIAHRIFSNKVLAEIER 518
            Y+  +FH++  ++ K +                   L  HFC ++AHRIFSNKVLAE+E 
Sbjct: 392  YLQQLFHEHVFIKAKNRLSSLGKPEISSQPVKDGPNLLGHFCVSLAHRIFSNKVLAELES 451

Query: 519  LVSRIPFVQLLSHPPWHSRTSSWSLSLKFPESVFHSACLSESSNNYDAKGLIRSQLHTKI 698
            LVSR+P+VQL+SHP WHSRTSSW+LS+  PES+ H+  LS SS   D    ++    TK+
Sbjct: 452  LVSRVPYVQLISHPTWHSRTSSWTLSMDVPESILHAGSLSHSS---DYVKNVKFHFRTKV 508

Query: 699  VVKDDQVTVSGEGAPSTLCSFRISP-NVSSVGSYGCXXXXXXXXXXXXXAGRIIQWLHDE 875
            +V+DD +++ GEGAP+ +  F+  P ++  +  Y C             A ++I+WLH+E
Sbjct: 509  MVRDDCISLEGEGAPNIVGLFKGKPDSICPMNRYDCDLSDLPMVLLQQVASQVIRWLHEE 568

Query: 876  ALIVGMKVRRDFLCLYFDLDQGDMLGLVARVDPDDVNGCISWWLITEDALQDDGK--FST 1049
            AL+VG+K  RDFL L F+L+QG+ L LVA VDP+D+ GCISWWL+  D   ++ K     
Sbjct: 569  ALMVGIKANRDFLSLSFELEQGETLSLVAHVDPEDIQGCISWWLVMGDGFSEENKLQMDV 628

Query: 1050 STGEYKNRRFLGHLSLEALYFMLMDLVNVSTDNG 1151
            ++GE + R+FLG+LSLE LY  LMD+V+VS+  G
Sbjct: 629  NSGESETRKFLGYLSLEVLYSTLMDMVSVSSTAG 662


>gb|EMS61166.1| hypothetical protein TRIUR3_03686 [Triticum urartu]
          Length = 570

 Score =  305 bits (780), Expect = 4e-80
 Identities = 168/389 (43%), Positives = 241/389 (61%), Gaps = 11/389 (2%)
 Frame = +3

Query: 3    KDTHSVLHEIHQSIFLQQVFDRVKHESYSPSPGINVTGMREDFLQLAVGQDTTIYLSLVP 182
            K  HS+L  IH+SIF +QV D V  E++  + G+NVTGMREDFLQLA+G+++ + LSLV 
Sbjct: 181  KQAHSILRNIHKSIFEEQVLDMVIRETFVQTQGVNVTGMREDFLQLAIGEESLLCLSLVD 240

Query: 183  FKKEDEFLDSMGHSQNTTNEHPHSDSSALVVI----NEKDVLNENNFGVPSSAGLEIYVM 350
               +D   +  GH +       H++S A +V+     +++ L  +  G  +   LEIY++
Sbjct: 241  -SGQDGDSEMAGHEE-------HNNSEANLVLATTNGKEEPLKRDTSGFLNPKSLEIYLL 292

Query: 351  HIFHKNSVVRLKEKK---IXXXXXXXXXXXXXXXCGL-SHFCKTIAHRIFSNKVLAEIER 518
            H+FH+N + +++EK    +               CGL SHFC T+AH+ +S KV  E+E 
Sbjct: 293  HLFHENILSKVREKYRNIVRYQSPAQTAESAGEDCGLLSHFCMTVAHKTYSKKVQLELES 352

Query: 519  LVSRIPFVQLLSHPPWHSRTSSWSLSLKFPESVFHSACLSESSNNYDAK-GLIRSQLHTK 695
            +VSR+P++QL S P WHSRTSSWSL L+ P+ +  +   ++ S+N + K    R+Q +TK
Sbjct: 353  VVSRVPYLQLRSLPTWHSRTSSWSLCLRVPQPILAADRPTKPSDNGEPKYKSSRTQFNTK 412

Query: 696  IVVKDDQVTVSGEGAPSTLCSFRISPNVSS-VGSYGCXXXXXXXXXXXXXAGRIIQWLHD 872
            IV+KD Q+++ GEG+PS   S    P+    + SY C             A +II WLH+
Sbjct: 413  IVLKDGQISLLGEGSPSIAGSLTRKPSDGYLINSYNCDLEDLPTMVLQQVASQIINWLHE 472

Query: 873  EALIVGMKVRRDFLCLYFDLDQGDMLGLVARVDPDDVNGCISWWLITEDALQDDGKFSTS 1052
            EAL++GM V RDFLCLYFDL+ GD LGLVA VDPDD  GCISW+L  +   +DDGK   +
Sbjct: 473  EALVLGMSVTRDFLCLYFDLEHGDTLGLVAHVDPDDEYGCISWYLTVDHPAEDDGKAPAA 532

Query: 1053 TGEY-KNRRFLGHLSLEALYFMLMDLVNV 1136
               + + RRFLG+LSLE LY  L+DL+N+
Sbjct: 533  DDPWAEKRRFLGYLSLEVLYSTLLDLINL 561


>dbj|BAK07358.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 474

 Score =  303 bits (775), Expect = 1e-79
 Identities = 168/389 (43%), Positives = 240/389 (61%), Gaps = 11/389 (2%)
 Frame = +3

Query: 3    KDTHSVLHEIHQSIFLQQVFDRVKHESYSPSPGINVTGMREDFLQLAVGQDTTIYLSLVP 182
            K  HS+L  IH+SIF +QV D V  E++  + G+NVTGMREDFLQLA+G+++ + LSLV 
Sbjct: 85   KQAHSILRNIHKSIFEEQVLDMVIRETFVQTQGVNVTGMREDFLQLAIGEESLLCLSLVN 144

Query: 183  FKKEDEFLDSMGHSQNTTNEHPHSDSSALVVI----NEKDVLNENNFGVPSSAGLEIYVM 350
               +D   +  GH +       H++S A +V+     +++ L  +  G  +   LEIY++
Sbjct: 145  -SGQDSDSEIAGHEE-------HNNSEANLVLATTNGKQEPLKMDTSGFLNPKSLEIYLL 196

Query: 351  HIFHKNSVVRLKEKK---IXXXXXXXXXXXXXXXCGL-SHFCKTIAHRIFSNKVLAEIER 518
            H+FH+N + +++EK    +               CGL SHFC T+AH+ FS KV  E+E 
Sbjct: 197  HLFHENILRKVREKYRNIVRYQSPAQTAESAGEDCGLLSHFCMTVAHKTFSKKVQLELES 256

Query: 519  LVSRIPFVQLLSHPPWHSRTSSWSLSLKFPESVFHSACLSESSNNYDAK-GLIRSQLHTK 695
            +VSR+P++QL S P WHSRTSSWSL L+ P+ +  +   ++ S+N + K    R+Q +TK
Sbjct: 257  VVSRVPYLQLRSLPTWHSRTSSWSLCLRVPQPILAADRPTKPSDNGEPKYKSSRTQFNTK 316

Query: 696  IVVKDDQVTVSGEGAPSTLCSFRISPNVSS-VGSYGCXXXXXXXXXXXXXAGRIIQWLHD 872
            IV+KD Q+++ GEG+PS   S    P+    + SY C             A +II WLH+
Sbjct: 317  IVLKDGQISLLGEGSPSIAGSLTRKPSDGYLINSYNCDLEDLPTMVLQQVASQIINWLHE 376

Query: 873  EALIVGMKVRRDFLCLYFDLDQGDMLGLVARVDPDDVNGCISWWLITEDALQDDGKFSTS 1052
            EAL++GM V RDFLCLYFDL+ GD LGLVA VDPDD  GCISW+L  +   ++DGK    
Sbjct: 377  EALVLGMSVTRDFLCLYFDLEHGDTLGLVAHVDPDDEYGCISWYLTVDHPAEEDGKAPAG 436

Query: 1053 TGEY-KNRRFLGHLSLEALYFMLMDLVNV 1136
               + + RRFLG+LSLE LY  L+DL+N+
Sbjct: 437  DDPWAEKRRFLGYLSLEVLYSTLLDLINL 465


>gb|EMT09196.1| hypothetical protein F775_08586 [Aegilops tauschii]
          Length = 668

 Score =  301 bits (771), Expect = 4e-79
 Identities = 167/389 (42%), Positives = 239/389 (61%), Gaps = 11/389 (2%)
 Frame = +3

Query: 3    KDTHSVLHEIHQSIFLQQVFDRVKHESYSPSPGINVTGMREDFLQLAVGQDTTIYLSLVP 182
            K  HS+L  IH+SIF +QV D V  E++  + G+NVTGMREDFLQLA+G+++ + LSLV 
Sbjct: 280  KQAHSILRNIHKSIFEEQVLDMVIRETFVQTQGVNVTGMREDFLQLAIGEESLLCLSLV- 338

Query: 183  FKKEDEFLDSMGHSQNTTNEHPHSDSSALVVI----NEKDVLNENNFGVPSSAGLEIYVM 350
                    DS   S +    H H++S A +V+     +++ L  +  G  +   LEIY++
Sbjct: 339  --------DSGQDSDSEMAGHEHNNSEANLVLATTNGKQEPLKRDTSGFLNPKSLEIYLL 390

Query: 351  HIFHKNSVVRLKEKK---IXXXXXXXXXXXXXXXCGL-SHFCKTIAHRIFSNKVLAEIER 518
            H+FH+N + +++EK    +                GL SHFC T+AH+ +S KV  E+E 
Sbjct: 391  HLFHENILRKVREKYRNIVRYQSPAQTAESAGEDSGLLSHFCMTVAHKTYSKKVQLELES 450

Query: 519  LVSRIPFVQLLSHPPWHSRTSSWSLSLKFPESVFHSACLSESSNNYDAK-GLIRSQLHTK 695
            +VSR+P++QL S P WHSRTSSWSL L+ P+ +  +   ++ S+N + K    R++ +TK
Sbjct: 451  VVSRVPYLQLRSLPTWHSRTSSWSLCLRVPQPILAADRPTKPSDNGEPKYKSSRTRFNTK 510

Query: 696  IVVKDDQVTVSGEGAPSTLCSFRISPNVSS-VGSYGCXXXXXXXXXXXXXAGRIIQWLHD 872
            IV+KD Q+++ GEG+PS   S    P+    + SY C             A +II WLH+
Sbjct: 511  IVLKDGQISLLGEGSPSIAGSLTRKPSDGYLINSYNCDLEDLPTMVLQQVASQIINWLHE 570

Query: 873  EALIVGMKVRRDFLCLYFDLDQGDMLGLVARVDPDDVNGCISWWLITEDALQDDGKFSTS 1052
            EAL++GM V RDFLCLYFDL+ GD LGLVA VDPDD  GCISW+L  +   +DDGK   +
Sbjct: 571  EALVLGMSVTRDFLCLYFDLEHGDTLGLVAHVDPDDEYGCISWYLTVDHPAEDDGKAPAA 630

Query: 1053 TGEY-KNRRFLGHLSLEALYFMLMDLVNV 1136
               + + RRFLG+LSLE LY  L+DL+N+
Sbjct: 631  DDPWAEKRRFLGYLSLEVLYSTLLDLINL 659


>ref|XP_006475818.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            17-like [Citrus sinensis]
          Length = 657

 Score =  295 bits (756), Expect = 2e-77
 Identities = 154/381 (40%), Positives = 225/381 (59%), Gaps = 3/381 (0%)
 Frame = +3

Query: 3    KDTHSVLHEIHQSIFLQQVFDRVKHESYSPSPGINVTGMREDFLQLAVGQDTTIYLSLVP 182
            ++ HS+L E+HQ+IF +QVFD V  E++  S G+NVTG+RE++LQL +G   +I+LSL+P
Sbjct: 277  REKHSLLREVHQAIFYEQVFDIVNREAFKQSLGVNVTGIRENYLQLGIGLGISIFLSLIP 336

Query: 183  FKKEDEFLDSMGHSQNTTNEHPHSDSSALVVINEKDVLNENNFGVPSSAGLEIYVMHIFH 362
              + D  +DS  +    +   P      + +  EKD +   + G P+    EIY+  +FH
Sbjct: 337  SNQGDLSVDSWVNQNVESGILPLDSHDGVKLAEEKDDILRKSGGYPNPLTYEIYLQQVFH 396

Query: 363  KNSVVRLKEKKIXXXXXXXXXXXXXXXCGLSHFCKTIAHRIFSNKVLAEIERLVSRIPFV 542
            +    R K K I                 L HFC ++AHRIFSNKV  E+E  V  +P++
Sbjct: 397  EYLYGRAKNKPISTGTRVSGPPTKDGSGLLGHFCLSLAHRIFSNKVHVELENAVCGVPYL 456

Query: 543  QLLSHPPWHSRTSSWSLSLKFPESVFHSACLSESSNNYDAKGLIRSQLHTKIVVKDDQVT 722
             L+SHP WHSRTSSW++ LK P+S+ H+   S ++         +S   T +VV DD + 
Sbjct: 457  HLVSHPTWHSRTSSWTVFLKVPQSILHAESNSRTAET------AKSHFRTNVVVNDDCIH 510

Query: 723  VSGEGAPSTLCSFR-ISPNVSSVGSYGCXXXXXXXXXXXXXAGRIIQWLHDEALIVGMKV 899
            V GEG P+ +  F+  S ++SS+  Y C             A ++I+WLH+EAL+VG+K 
Sbjct: 511  VEGEGTPNVVGLFKGRSEDMSSMNKYDCDLADLPVIILQQVASQVIRWLHEEALMVGIKA 570

Query: 900  RRDFLCLYFDLDQGDMLGLVARVDPDDVNGCISWWLITEDALQDDGKFSTSTGEYKN--R 1073
             RDFL L F+LDQG+ + LVA VDP+D+ GCISWWL+ ED    + K S    +  +  +
Sbjct: 571  NRDFLSLSFELDQGETVSLVAHVDPEDMRGCISWWLVMEDGFAAERKLSIDISDDASDYK 630

Query: 1074 RFLGHLSLEALYFMLMDLVNV 1136
            +FLGHLSL+ LY  LMDLV++
Sbjct: 631  KFLGHLSLDVLYSTLMDLVSL 651