BLASTX nr result

ID: Zingiber25_contig00024801 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00024801
         (352 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A2XA73.1|GRF1_ORYSI RecName: Full=Growth-regulating factor 1;...   112   5e-23
gb|EAZ24805.1| hypothetical protein OsJ_08584 [Oryza sativa Japo...   112   5e-23
ref|NP_001048288.1| Os02g0776900 [Oryza sativa Japonica Group] g...   112   5e-23
ref|XP_006647996.1| PREDICTED: growth-regulating factor 1-like [...   111   9e-23
ref|XP_003570521.1| PREDICTED: uncharacterized protein LOC100845...   109   3e-22
gb|EMT04093.1| hypothetical protein F775_24390 [Aegilops tauschii]    108   9e-22
dbj|BAJ85032.1| predicted protein [Hordeum vulgare subsp. vulgare]    105   6e-21
dbj|BAJ87627.1| predicted protein [Hordeum vulgare subsp. vulgare]    103   2e-20
ref|XP_002516290.1| conserved hypothetical protein [Ricinus comm...   101   1e-19
gb|EPS64309.1| hypothetical protein M569_10478, partial [Genlise...    99   7e-19
ref|XP_003547502.2| PREDICTED: growth-regulating factor 1-like [...    98   1e-18
ref|XP_003534945.2| PREDICTED: growth-regulating factor 1-like [...    98   1e-18
gb|ESW10663.1| hypothetical protein PHAVU_009G228000g [Phaseolus...    98   1e-18
ref|XP_006372002.1| hypothetical protein POPTR_0018s07140g [Popu...    97   2e-18
ref|XP_004303687.1| PREDICTED: growth-regulating factor 5-like [...    97   2e-18
ref|XP_006381639.1| hypothetical protein POPTR_0006s14560g [Popu...    96   5e-18
gb|EMJ16060.1| hypothetical protein PRUPE_ppa017593mg [Prunus pe...    96   5e-18
gb|AEK86528.1| growth-regulating factor 5 [Brassica rapa subsp. ...    96   5e-18
emb|CBI35876.3| unnamed protein product [Vitis vinifera]               95   8e-18
gb|EMT01601.1| hypothetical protein F775_13620 [Aegilops tauschii]     95   1e-17

>sp|A2XA73.1|GRF1_ORYSI RecName: Full=Growth-regulating factor 1; Short=OsGRF1; AltName:
           Full=Transcription activator GRF1
           gi|6573149|gb|AAF17567.1|AF201895_1 growth-regulating
           factor 1 [Oryza sativa] gi|125541338|gb|EAY87733.1|
           hypothetical protein OsI_09149 [Oryza sativa Indica
           Group]
          Length = 396

 Score =  112 bits (280), Expect = 5e-23
 Identities = 55/91 (60%), Positives = 66/91 (72%), Gaps = 4/91 (4%)
 Frame = -3

Query: 263 GGGGSIYPFTLSQWQELELQALVFRYMAAGIPVPSDLVLCIRRRPFVDP--QTLPFL--P 96
           G GG  YPFT SQWQELE QAL+++YMA+G P+PSDL+L +RR   +D    T P L  P
Sbjct: 11  GAGGGRYPFTASQWQELEHQALIYKYMASGTPIPSDLILPLRRSFLLDSALATSPSLAFP 70

Query: 95  NLPAIGWGAYQMGDARKAMDPEPGRCRRTDG 3
             P++GWG + MG  RKA DPEPGRCRRTDG
Sbjct: 71  PQPSLGWGCFGMGFGRKAEDPEPGRCRRTDG 101


>gb|EAZ24805.1| hypothetical protein OsJ_08584 [Oryza sativa Japonica Group]
          Length = 360

 Score =  112 bits (280), Expect = 5e-23
 Identities = 55/91 (60%), Positives = 66/91 (72%), Gaps = 4/91 (4%)
 Frame = -3

Query: 263 GGGGSIYPFTLSQWQELELQALVFRYMAAGIPVPSDLVLCIRRRPFVDP--QTLPFL--P 96
           G GG  YPFT SQWQELE QAL+++YMA+G P+PSDL+L +RR   +D    T P L  P
Sbjct: 11  GAGGGRYPFTASQWQELEHQALIYKYMASGTPIPSDLILPLRRSFLLDSALATSPSLAFP 70

Query: 95  NLPAIGWGAYQMGDARKAMDPEPGRCRRTDG 3
             P++GWG + MG  RKA DPEPGRCRRTDG
Sbjct: 71  PQPSLGWGCFGMGFGRKAEDPEPGRCRRTDG 101


>ref|NP_001048288.1| Os02g0776900 [Oryza sativa Japonica Group]
           gi|75120360|sp|Q6AWY8.1|GRF1_ORYSJ RecName:
           Full=Growth-regulating factor 1; Short=OsGRF1; AltName:
           Full=Transcription activator GRF1
           gi|51039831|tpg|DAA05205.1| TPA_exp: growth-regulating
           factor 1 [Oryza sativa (japonica cultivar-group)]
           gi|113537819|dbj|BAF10202.1| Os02g0776900 [Oryza sativa
           Japonica Group]
          Length = 397

 Score =  112 bits (280), Expect = 5e-23
 Identities = 55/91 (60%), Positives = 66/91 (72%), Gaps = 4/91 (4%)
 Frame = -3

Query: 263 GGGGSIYPFTLSQWQELELQALVFRYMAAGIPVPSDLVLCIRRRPFVDP--QTLPFL--P 96
           G GG  YPFT SQWQELE QAL+++YMA+G P+PSDL+L +RR   +D    T P L  P
Sbjct: 11  GAGGGRYPFTASQWQELEHQALIYKYMASGTPIPSDLILPLRRSFLLDSALATSPSLAFP 70

Query: 95  NLPAIGWGAYQMGDARKAMDPEPGRCRRTDG 3
             P++GWG + MG  RKA DPEPGRCRRTDG
Sbjct: 71  PQPSLGWGCFGMGFGRKAEDPEPGRCRRTDG 101


>ref|XP_006647996.1| PREDICTED: growth-regulating factor 1-like [Oryza brachyantha]
          Length = 390

 Score =  111 bits (278), Expect = 9e-23
 Identities = 54/91 (59%), Positives = 66/91 (72%), Gaps = 4/91 (4%)
 Frame = -3

Query: 263 GGGGSIYPFTLSQWQELELQALVFRYMAAGIPVPSDLVLCIRRRPFVDP--QTLPFL--P 96
           GG G  YPFT SQWQELE QAL+++YMA+G P+PSDL++ +RR   +D    T P L  P
Sbjct: 10  GGAGGRYPFTASQWQELEHQALIYKYMASGTPIPSDLIIPLRRSFLLDSALATSPSLAFP 69

Query: 95  NLPAIGWGAYQMGDARKAMDPEPGRCRRTDG 3
             P++GWG + MG  RKA DPEPGRCRRTDG
Sbjct: 70  PQPSLGWGCFGMGFGRKAEDPEPGRCRRTDG 100


>ref|XP_003570521.1| PREDICTED: uncharacterized protein LOC100845697 [Brachypodium
           distachyon]
          Length = 418

 Score =  109 bits (273), Expect = 3e-22
 Identities = 54/91 (59%), Positives = 66/91 (72%), Gaps = 4/91 (4%)
 Frame = -3

Query: 263 GGGGSIYPFTLSQWQELELQALVFRYMAAGIPVPSDLVLCIRRRPFVDP--QTLPFLPNL 90
           GGGG   PFT +QWQELE QAL+++YMA+G+P+PSDL+L +RR    DP   T P L   
Sbjct: 13  GGGGGRCPFTATQWQELEHQALIYKYMASGVPIPSDLLLPLRRSFLFDPALATSPSLAFS 72

Query: 89  P--AIGWGAYQMGDARKAMDPEPGRCRRTDG 3
           P  ++GWG + MG  RKA DPEPGRCRRTDG
Sbjct: 73  PQSSLGWGCFGMGFGRKAEDPEPGRCRRTDG 103


>gb|EMT04093.1| hypothetical protein F775_24390 [Aegilops tauschii]
          Length = 202

 Score =  108 bits (269), Expect = 9e-22
 Identities = 55/104 (52%), Positives = 68/104 (65%), Gaps = 13/104 (12%)
 Frame = -3

Query: 275 IMMMGG---------GGSIYPFTLSQWQELELQALVFRYMAAGIPVPSDLVLCIRRRPFV 123
           +MMMGG         GG   PFT +QWQELE QAL+++YMA+G+P+PSDL+L +RR   +
Sbjct: 1   MMMMGGRAGAGGVGAGGGRCPFTATQWQELEHQALIYKYMASGVPIPSDLLLPLRRSFLL 60

Query: 122 DPQTLP----FLPNLPAIGWGAYQMGDARKAMDPEPGRCRRTDG 3
           D    P      P   A+GWG + MG  RKA DPEPGRCRRTDG
Sbjct: 61  DSALAPSPSLAFPPQAALGWGCFGMGFGRKAEDPEPGRCRRTDG 104


>dbj|BAJ85032.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 413

 Score =  105 bits (262), Expect = 6e-21
 Identities = 56/104 (53%), Positives = 69/104 (66%), Gaps = 13/104 (12%)
 Frame = -3

Query: 275 IMMMGG---------GGSIYPFTLSQWQELELQALVFRYMAAGIPVPSDLVLCIRRRPFV 123
           +MMMGG         GG   PFT +QWQELE QAL+++YMA+G+P+PSDL+L +RR   +
Sbjct: 1   MMMMGGRAGAGGVGAGGGRCPFTATQWQELEHQALIYKYMASGVPIPSDLLLPLRRSFLL 60

Query: 122 DP--QTLPFL--PNLPAIGWGAYQMGDARKAMDPEPGRCRRTDG 3
           D    T P L  P   A+GWG + MG  RK  DPEPGRCRRTDG
Sbjct: 61  DSALATSPSLAFPPQAALGWGCFGMGFGRKPEDPEPGRCRRTDG 104


>dbj|BAJ87627.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 413

 Score =  103 bits (258), Expect = 2e-20
 Identities = 55/104 (52%), Positives = 68/104 (65%), Gaps = 13/104 (12%)
 Frame = -3

Query: 275 IMMMGG---------GGSIYPFTLSQWQELELQALVFRYMAAGIPVPSDLVLCIRRRPFV 123
           +MMMGG         GG   PFT +QWQELE QAL+++YMA+G+P+PSDL+L +RR   +
Sbjct: 1   MMMMGGRAGAGGVGAGGGRCPFTATQWQELEHQALIYKYMASGVPIPSDLLLPLRRSFLL 60

Query: 122 DP--QTLPFL--PNLPAIGWGAYQMGDARKAMDPEPGRCRRTDG 3
           D    T P L  P    +GWG + MG  RK  DPEPGRCRRTDG
Sbjct: 61  DSALATSPSLAFPPQATLGWGCFGMGFGRKPEDPEPGRCRRTDG 104


>ref|XP_002516290.1| conserved hypothetical protein [Ricinus communis]
           gi|223544776|gb|EEF46292.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 253

 Score =  101 bits (251), Expect = 1e-19
 Identities = 50/89 (56%), Positives = 61/89 (68%), Gaps = 1/89 (1%)
 Frame = -3

Query: 266 MGGGGSIYPFTLSQWQELELQALVFRYMAAGIPVPSDLVLCIRRRPFVDPQTLPFLPNLP 87
           M  G + +PFT SQWQELE QAL+F+YM +GIP+PSDL+  I+R     P +    P  P
Sbjct: 1   MMSGTNKFPFTASQWQELEHQALIFKYMVSGIPIPSDLLFTIKRSCLDSPLSSKLFPRQP 60

Query: 86  A-IGWGAYQMGDARKAMDPEPGRCRRTDG 3
             IGW  +QMG  RK +DPEPGRCRRTDG
Sbjct: 61  PHIGWSCFQMGLGRK-IDPEPGRCRRTDG 88


>gb|EPS64309.1| hypothetical protein M569_10478, partial [Genlisea aurea]
          Length = 158

 Score = 98.6 bits (244), Expect = 7e-19
 Identities = 51/88 (57%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
 Frame = -3

Query: 263 GGGGSIYPFTLSQWQELELQALVFRYMAAGIPVPSDLVLCIRRRPFVDPQTLPFLPNLPA 84
           GGG S YPFT SQWQELE QALV++YM +GIP+P DL+  IRR   +D  T   LP    
Sbjct: 4   GGGRSRYPFTASQWQELEHQALVYKYMISGIPIPPDLLFTIRRS--LDSSTF-LLPQPQQ 60

Query: 83  IGWGAYQMG-DARKAMDPEPGRCRRTDG 3
           IGW  + MG    + +DPEPGRCRRTDG
Sbjct: 61  IGWSGFHMGMGFGRKIDPEPGRCRRTDG 88


>ref|XP_003547502.2| PREDICTED: growth-regulating factor 1-like [Glycine max]
          Length = 365

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 50/89 (56%), Positives = 61/89 (68%), Gaps = 1/89 (1%)
 Frame = -3

Query: 266 MGGGGSIYPFTLSQWQELELQALVFRYMAAGIPVPSDLVLCIRRRPFVDPQTLPFLPNLP 87
           M  G + +PFT SQWQELE QAL+++YMA+GI +P DL+  I+R  F  P +   LPN P
Sbjct: 1   MMNGRNRFPFTPSQWQELEHQALIYKYMASGISIPPDLLFTIKRSYFDSPLSSRLLPNQP 60

Query: 86  A-IGWGAYQMGDARKAMDPEPGRCRRTDG 3
              GW   QMG  RK +DPEPGRCRRTDG
Sbjct: 61  QHFGWNYLQMGLGRK-IDPEPGRCRRTDG 88


>ref|XP_003534945.2| PREDICTED: growth-regulating factor 1-like [Glycine max]
          Length = 365

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 50/89 (56%), Positives = 61/89 (68%), Gaps = 1/89 (1%)
 Frame = -3

Query: 266 MGGGGSIYPFTLSQWQELELQALVFRYMAAGIPVPSDLVLCIRRRPFVDPQTLPFLPNLP 87
           M  G + +PFT SQWQELE QAL+++YMA+GI +P DL+  I+R  F  P +   LPN P
Sbjct: 1   MMNGRNRFPFTPSQWQELEHQALIYKYMASGISIPPDLLFTIKRSYFDSPLSSRLLPNQP 60

Query: 86  A-IGWGAYQMGDARKAMDPEPGRCRRTDG 3
              GW   QMG  RK +DPEPGRCRRTDG
Sbjct: 61  QHFGWNYLQMGLGRK-IDPEPGRCRRTDG 88


>gb|ESW10663.1| hypothetical protein PHAVU_009G228000g [Phaseolus vulgaris]
          Length = 357

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 50/89 (56%), Positives = 61/89 (68%), Gaps = 1/89 (1%)
 Frame = -3

Query: 266 MGGGGSIYPFTLSQWQELELQALVFRYMAAGIPVPSDLVLCIRRRPFVDPQTLPFLPNLP 87
           M  G + +PFT SQWQELE QAL+++YMA+GI +P DL+  I+R  F  P +   LPN P
Sbjct: 1   MMNGRNRFPFTPSQWQELEHQALIYKYMASGISIPPDLLFTIKRSYFDSPLSSRLLPNQP 60

Query: 86  A-IGWGAYQMGDARKAMDPEPGRCRRTDG 3
              GW   QMG  RK +DPEPGRCRRTDG
Sbjct: 61  QHFGWNYLQMGLGRK-IDPEPGRCRRTDG 88


>ref|XP_006372002.1| hypothetical protein POPTR_0018s07140g [Populus trichocarpa]
           gi|550318249|gb|ERP49799.1| hypothetical protein
           POPTR_0018s07140g [Populus trichocarpa]
          Length = 382

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 48/89 (53%), Positives = 60/89 (67%)
 Frame = -3

Query: 269 MMGGGGSIYPFTLSQWQELELQALVFRYMAAGIPVPSDLVLCIRRRPFVDPQTLPFLPNL 90
           M+  GG+ +PFT SQWQELE QAL+++YM +GIP+P DL+  I+R   +D   L F    
Sbjct: 1   MIMSGGNRFPFTASQWQELEHQALIYKYMVSGIPIPPDLLFTIKRSVCLDSSKL-FPHQH 59

Query: 89  PAIGWGAYQMGDARKAMDPEPGRCRRTDG 3
           P   W  +QMG  RK  DPEPGRCRRTDG
Sbjct: 60  PHFAWSCFQMGLGRKT-DPEPGRCRRTDG 87


>ref|XP_004303687.1| PREDICTED: growth-regulating factor 5-like [Fragaria vesca subsp.
           vesca]
          Length = 328

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 52/95 (54%), Positives = 62/95 (65%), Gaps = 5/95 (5%)
 Frame = -3

Query: 272 MMMGGGGSI-----YPFTLSQWQELELQALVFRYMAAGIPVPSDLVLCIRRRPFVDPQTL 108
           MM GG  S      YPFT +QWQELE QAL+F+YM +G+PVP+DLV   +RR      + 
Sbjct: 1   MMSGGSPSSARNFRYPFTATQWQELEHQALIFKYMVSGVPVPTDLVYSFKRR-LDSSMSS 59

Query: 107 PFLPNLPAIGWGAYQMGDARKAMDPEPGRCRRTDG 3
              P+ P  GWG Y MG  RK +DPEPGRCRRTDG
Sbjct: 60  RLFPHHP-FGWGCYDMGFGRK-IDPEPGRCRRTDG 92


>ref|XP_006381639.1| hypothetical protein POPTR_0006s14560g [Populus trichocarpa]
           gi|550336347|gb|ERP59436.1| hypothetical protein
           POPTR_0006s14560g [Populus trichocarpa]
          Length = 383

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 47/87 (54%), Positives = 60/87 (68%), Gaps = 2/87 (2%)
 Frame = -3

Query: 257 GGSIYPFTLSQWQELELQALVFRYMAAGIPVPSDLVLCIRRRPFVDP--QTLPFLPNLPA 84
           GG+ +PFT SQWQELE QAL+++YM +GIP+P DL+  I+R   +D    +  F    P 
Sbjct: 3   GGNRFPFTASQWQELEHQALIYKYMVSGIPIPPDLLFTIKRSGCLDSSLSSKLFPRQPPH 62

Query: 83  IGWGAYQMGDARKAMDPEPGRCRRTDG 3
             WG +QMG  RK +DPEPGRCRRTDG
Sbjct: 63  FSWGCFQMGLGRK-IDPEPGRCRRTDG 88


>gb|EMJ16060.1| hypothetical protein PRUPE_ppa017593mg [Prunus persica]
          Length = 363

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 49/81 (60%), Positives = 61/81 (75%)
 Frame = -3

Query: 245 YPFTLSQWQELELQALVFRYMAAGIPVPSDLVLCIRRRPFVDPQTLPFLPNLPAIGWGAY 66
           YPFT +QWQELE QAL+F+YMA+GIP+P+DLV  ++RR  +D      L   P +GWG Y
Sbjct: 13  YPFTPNQWQELEHQALIFKYMASGIPIPTDLVYSLKRR--LDNSISSRLFPHP-MGWGCY 69

Query: 65  QMGDARKAMDPEPGRCRRTDG 3
           +MG  RK +DPEPGRCRRTDG
Sbjct: 70  EMGFGRK-VDPEPGRCRRTDG 89


>gb|AEK86528.1| growth-regulating factor 5 [Brassica rapa subsp. pekinensis]
          Length = 363

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 47/80 (58%), Positives = 58/80 (72%)
 Frame = -3

Query: 242 PFTLSQWQELELQALVFRYMAAGIPVPSDLVLCIRRRPFVDPQTLPFLPNLPAIGWGAYQ 63
           PFT +QWQELE QAL+++YM +G+PVP +L+L IRR   +D   +  L    +IGWG YQ
Sbjct: 16  PFTPTQWQELEHQALIYKYMVSGVPVPPELILSIRRS--LDSSLVSRLLPHQSIGWGCYQ 73

Query: 62  MGDARKAMDPEPGRCRRTDG 3
           MG  RK  DPEPGRCRRTDG
Sbjct: 74  MGSGRKP-DPEPGRCRRTDG 92


>emb|CBI35876.3| unnamed protein product [Vitis vinifera]
          Length = 363

 Score = 95.1 bits (235), Expect = 8e-18
 Identities = 48/89 (53%), Positives = 61/89 (68%)
 Frame = -3

Query: 269 MMGGGGSIYPFTLSQWQELELQALVFRYMAAGIPVPSDLVLCIRRRPFVDPQTLPFLPNL 90
           MM    +  PFT SQWQELE QAL+F+Y+ +G+P+P+DL+ C  +R      +    P+ 
Sbjct: 1   MMMSARNRSPFTASQWQELEHQALIFKYIVSGVPIPADLI-CTVKRSLDSSLSSRLFPHQ 59

Query: 89  PAIGWGAYQMGDARKAMDPEPGRCRRTDG 3
           P IGWG +QMG  RKA DPEPGRCRRTDG
Sbjct: 60  P-IGWGCFQMGFGRKA-DPEPGRCRRTDG 86


>gb|EMT01601.1| hypothetical protein F775_13620 [Aegilops tauschii]
          Length = 322

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 53/96 (55%), Positives = 62/96 (64%), Gaps = 9/96 (9%)
 Frame = -3

Query: 263 GGGGSIYPFTLSQWQELELQALVFRYMAAGIPVPSDLVLCIRRR---PFVDPQTLPFL-- 99
           GGGG    FT SQW+ELE QAL+++YMAAG  VP +LVL +R R    F    T+P L  
Sbjct: 8   GGGGGRCLFTASQWRELEHQALIYKYMAAGSQVPHELVLPLRHRDAAAFAAIDTVPSLAC 67

Query: 98  --PNLPAIGWGAYQMGD--ARKAMDPEPGRCRRTDG 3
             P  P++GWG Y  G   ARK  DPEPGRCRRTDG
Sbjct: 68  YPPPQPSLGWGLYGAGAQYARKPEDPEPGRCRRTDG 103


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