BLASTX nr result
ID: Zingiber25_contig00024779
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00024779
(1185 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002329726.1| predicted protein [Populus trichocarpa] gi|5... 208 4e-51
gb|EXC35976.1| E3 ubiquitin-protein ligase RING1 [Morus notabilis] 207 5e-51
ref|XP_006441411.1| hypothetical protein CICLE_v10020902mg [Citr... 205 3e-50
ref|XP_006493415.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 204 4e-50
gb|ESW24544.1| hypothetical protein PHAVU_004G139600g [Phaseolus... 203 1e-49
ref|XP_003549174.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 199 1e-48
ref|XP_002317728.2| hypothetical protein POPTR_0012s03370g [Popu... 199 2e-48
ref|XP_003534093.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 199 2e-48
ref|XP_002267134.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 198 3e-48
emb|CAN79596.1| hypothetical protein VITISV_042386 [Vitis vinifera] 198 3e-48
ref|XP_006353939.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 196 2e-47
ref|XP_004235401.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 196 2e-47
ref|XP_004137524.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 194 8e-47
ref|XP_003620252.1| RING finger protein [Medicago truncatula] gi... 191 7e-46
sp|P0CH30.1|RING1_GOSHI RecName: Full=E3 ubiquitin-protein ligas... 188 3e-45
ref|XP_006847820.1| hypothetical protein AMTR_s00029p00043520 [A... 187 9e-45
gb|EOX99086.1| RING/U-box superfamily protein, putative [Theobro... 186 2e-44
ref|XP_004515274.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 185 3e-44
ref|XP_002883213.1| zinc finger family protein [Arabidopsis lyra... 184 8e-44
gb|ACT21194.1| zinc finger protein [Carica papaya] 184 8e-44
>ref|XP_002329726.1| predicted protein [Populus trichocarpa]
gi|566206023|ref|XP_006374275.1| hypothetical protein
POPTR_0015s05600g [Populus trichocarpa]
gi|118486397|gb|ABK95038.1| unknown [Populus trichocarpa]
gi|550322032|gb|ERP52072.1| hypothetical protein
POPTR_0015s05600g [Populus trichocarpa]
Length = 345
Score = 208 bits (529), Expect = 4e-51
Identities = 109/240 (45%), Positives = 143/240 (59%), Gaps = 28/240 (11%)
Frame = -2
Query: 1184 QCSRTFTFVG--SGLACAHCHGDFVEELDILTPNPSXXXXXXXXXRFAYDDSDVFDSI-P 1014
QC+RT T + L+C +CH F+EELD P+P+ D + +F + P
Sbjct: 16 QCNRTVTITPPTTALSCPNCHEGFLEELDSPNPSPNPFDAGLGPALLLDDFASIFGGMNP 75
Query: 1013 SLFSSIIDFAASIDDSSAP----------FAALRDIIQXXXXXXXXXXXXXXXG------ 882
+ SS A+ S++P F L++ +Q
Sbjct: 76 TPRSSTTSTTATNSSSASPLFQDPDGFNPFVFLQNYLQTMRAGGANIQFVIENNPGMGGM 135
Query: 881 ---------NVGDYYVGPGLEQLIQQLAENDPNRYGTPPASKAAVESLLDVVVTEGLLSI 729
N+GDY++GPGLEQLIQQLAENDPNRYGTPPA+K+AVE+L DV VTE L+
Sbjct: 136 DPTGFRVPANLGDYFIGPGLEQLIQQLAENDPNRYGTPPAAKSAVENLPDVKVTEELMQS 195
Query: 728 DEAQCSVCMDTFQMGAMAKKMPCSHVYHKDCILPWLELHNSCPVCRYELPTDDPDYEHYK 549
D +QC+VC D+F++G +AK++PC H+YHKDCI+PWLELHNSCPVCRYELPTDD DYE K
Sbjct: 196 DSSQCAVCKDSFELGEVAKQIPCKHIYHKDCIMPWLELHNSCPVCRYELPTDDQDYEQRK 255
>gb|EXC35976.1| E3 ubiquitin-protein ligase RING1 [Morus notabilis]
Length = 378
Score = 207 bits (528), Expect = 5e-51
Identities = 113/249 (45%), Positives = 141/249 (56%), Gaps = 40/249 (16%)
Frame = -2
Query: 1184 QCSRTFTFVGS---GLACAHCHGDFVEELDILTPNPSXXXXXXXXXRFAYDDSD------ 1032
QC+RT + S L C C G F+EE + PNPS F+ DDS
Sbjct: 25 QCNRTVSITPSPTSDLVCPVCGGGFLEE--VQNPNPSPEPSPNSFFSFSSDDSSFGARGF 82
Query: 1031 ----------------VFDSIPSLFSSIIDFAASIDDSSA--PFAALRDIIQ-------- 930
+ D +P+LF + + +D+ A PFA L++ +Q
Sbjct: 83 PLLFTTTSSSGHGGGALVDDLPALFGGPLTRVSQSEDTDAFNPFAFLQNYLQTLRATGAN 142
Query: 929 -----XXXXXXXXXXXXXXXGNVGDYYVGPGLEQLIQQLAENDPNRYGTPPASKAAVESL 765
N+GDY+ GPGLEQLIQQLAENDPNRYGTPPASK+A+E L
Sbjct: 143 VQFVIDGNPGDPAGFRVPTNLNLGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAMEGL 202
Query: 764 LDVVVTEGLLSIDEAQCSVCMDTFQMGAMAKKMPCSHVYHKDCILPWLELHNSCPVCRYE 585
V +TE LL+ D +QC+VC DTF++G AK+MPC H+YH +CILPWLELHNSCPVCRYE
Sbjct: 203 PSVKITEELLASDSSQCAVCKDTFELGEEAKQMPCKHIYHSECILPWLELHNSCPVCRYE 262
Query: 584 LPTDDPDYE 558
LPTDDPDYE
Sbjct: 263 LPTDDPDYE 271
>ref|XP_006441411.1| hypothetical protein CICLE_v10020902mg [Citrus clementina]
gi|557543673|gb|ESR54651.1| hypothetical protein
CICLE_v10020902mg [Citrus clementina]
Length = 350
Score = 205 bits (521), Expect = 3e-50
Identities = 102/224 (45%), Positives = 136/224 (60%), Gaps = 15/224 (6%)
Frame = -2
Query: 1184 QCSRTFTFV---GSGLACAHCHGDFVEELDILTPNPSXXXXXXXXXRFAYDDSDVFDSI- 1017
QC+RT S L C C+G F+EEL+ TPNPS F DD +
Sbjct: 28 QCNRTVRVTPSPSSDLVCPSCNGGFIEELE--TPNPSVNPNPNPMDAFLLDDLSTLLGMG 85
Query: 1016 -------PSLFSSIIDFAASIDDSSAPFAALRDIIQXXXXXXXXXXXXXXXG----NVGD 870
PS F+ + + + A A+++ +++ N+GD
Sbjct: 86 PTRSFTDPSEFNPFVFLQNYLQNLRANGASIQFVVENNSNVDPAAGGAGAAFRLPANLGD 145
Query: 869 YYVGPGLEQLIQQLAENDPNRYGTPPASKAAVESLLDVVVTEGLLSIDEAQCSVCMDTFQ 690
Y++GPGLEQLIQQLAENDPNRYGTPPASK+A+E+L + + E ++S D +QC+VC D+F+
Sbjct: 146 YFIGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPSIKINEAMMSSDSSQCAVCKDSFE 205
Query: 689 MGAMAKKMPCSHVYHKDCILPWLELHNSCPVCRYELPTDDPDYE 558
+ A++MPC H+YH DCI+PWLELHNSCPVCRYELPTDDPDYE
Sbjct: 206 LNEEARQMPCKHIYHPDCIMPWLELHNSCPVCRYELPTDDPDYE 249
>ref|XP_006493415.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Citrus sinensis]
Length = 352
Score = 204 bits (520), Expect = 4e-50
Identities = 102/224 (45%), Positives = 136/224 (60%), Gaps = 15/224 (6%)
Frame = -2
Query: 1184 QCSRTFTFV---GSGLACAHCHGDFVEELDILTPNPSXXXXXXXXXRFAYDDSDVFDSI- 1017
QC+RT S L C C+G F+EEL+ TPNPS F DD +
Sbjct: 28 QCNRTVRVTPSPSSDLLCPSCNGGFIEELE--TPNPSVNPNPNPMDAFLLDDLSTLLGMG 85
Query: 1016 -------PSLFSSIIDFAASIDDSSAPFAALRDIIQXXXXXXXXXXXXXXXG----NVGD 870
PS F+ + + + A A+++ +++ N+GD
Sbjct: 86 PTRSFTDPSEFNPFVFLQNYLQNLRANGASIQFVVENNSNVDPAAGGAGAAFRLPANLGD 145
Query: 869 YYVGPGLEQLIQQLAENDPNRYGTPPASKAAVESLLDVVVTEGLLSIDEAQCSVCMDTFQ 690
Y++GPGLEQLIQQLAENDPNRYGTPPASK+A+E+L + + E ++S D +QC+VC D+F+
Sbjct: 146 YFIGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPSIKINEAMMSSDSSQCAVCKDSFE 205
Query: 689 MGAMAKKMPCSHVYHKDCILPWLELHNSCPVCRYELPTDDPDYE 558
+ A++MPC H+YH DCI+PWLELHNSCPVCRYELPTDDPDYE
Sbjct: 206 LNEEARQMPCKHIYHPDCIMPWLELHNSCPVCRYELPTDDPDYE 249
>gb|ESW24544.1| hypothetical protein PHAVU_004G139600g [Phaseolus vulgaris]
Length = 359
Score = 203 bits (516), Expect = 1e-49
Identities = 111/235 (47%), Positives = 134/235 (57%), Gaps = 26/235 (11%)
Frame = -2
Query: 1184 QCSRTFTFV---GSGLACAHCHGDFVEELDILTPNPS----------XXXXXXXXXRFAY 1044
QC+RT + S L C C+ F+EEL+I PNP+ F
Sbjct: 20 QCNRTVSVTPSPSSDLICPDCNSGFLEELEIPNPNPTPSNPFFPDFPLAGATAIPFVFPG 79
Query: 1043 DDSDVFDSIPSLFSSIIDFAASIDDSSAPFAALRDIIQXXXXXXXXXXXXXXXGN----- 879
FD +L S I AA+ D + APF L++ +Q +
Sbjct: 80 GAGQPFDDFSTL-SGIRSDAATADTALAPFVLLQNYLQTLRAGGGGGNLQLVIESGDPGG 138
Query: 878 --------VGDYYVGPGLEQLIQQLAENDPNRYGTPPASKAAVESLLDVVVTEGLLSIDE 723
GDY+ G GLE+LIQ LAENDPNRYGTPPASK AVE L DV VTE LL+ D
Sbjct: 139 AFRFPGITHGDYFFGTGLEELIQHLAENDPNRYGTPPASKTAVEGLPDVSVTEELLASDS 198
Query: 722 AQCSVCMDTFQMGAMAKKMPCSHVYHKDCILPWLELHNSCPVCRYELPTDDPDYE 558
+QC+VC DTF++G AK+MPC H+YH DCILPWLE+HNSCPVCRYELPTDDPDYE
Sbjct: 199 SQCAVCKDTFELGETAKQMPCKHIYHADCILPWLEMHNSCPVCRYELPTDDPDYE 253
>ref|XP_003549174.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
Length = 369
Score = 199 bits (507), Expect = 1e-48
Identities = 109/235 (46%), Positives = 133/235 (56%), Gaps = 26/235 (11%)
Frame = -2
Query: 1184 QCSRTFTFV---GSGLACAHCHGDFVEELDILTPNPSXXXXXXXXXRFAYDD-------- 1038
QC+RT + S L C C+G F+EEL+ PNP+ F
Sbjct: 24 QCNRTVSISPSPSSDLLCPTCNGGFLEELEFPIPNPNPNPPNPFFPDFPLAGAATIPLVL 83
Query: 1037 -----SDVFDSIPSLFSSIIDFAASIDDSSAPFAALRDIIQ----------XXXXXXXXX 903
S F+ + +LF + D AA D+ P L++ Q
Sbjct: 84 PGAAASPPFEDLSALFGNRPDAAA---DAFNPLVFLQNYFQTLRAGGNLQLVIESGDPGG 140
Query: 902 XXXXXXGNVGDYYVGPGLEQLIQQLAENDPNRYGTPPASKAAVESLLDVVVTEGLLSIDE 723
GDY+ GPGLE+LIQ LAENDPNRYGTPPASK+ VE L DV VTE LL+ D
Sbjct: 141 AFRFPGVTHGDYFFGPGLEELIQHLAENDPNRYGTPPASKSVVEGLPDVSVTEELLASDS 200
Query: 722 AQCSVCMDTFQMGAMAKKMPCSHVYHKDCILPWLELHNSCPVCRYELPTDDPDYE 558
+QC+VC DTF++G AK++PC H+YH DCILPWLELHNSCPVCRYELPTDDPDYE
Sbjct: 201 SQCAVCKDTFELGETAKQIPCKHIYHADCILPWLELHNSCPVCRYELPTDDPDYE 255
>ref|XP_002317728.2| hypothetical protein POPTR_0012s03370g [Populus trichocarpa]
gi|550326298|gb|EEE95948.2| hypothetical protein
POPTR_0012s03370g [Populus trichocarpa]
Length = 269
Score = 199 bits (506), Expect = 2e-48
Identities = 109/247 (44%), Positives = 139/247 (56%), Gaps = 35/247 (14%)
Frame = -2
Query: 1184 QCSRTFTFVGS---GLACAHCHGDFVEELDILTPNPSXXXXXXXXXRFAYDDSDVFDSIP 1014
QC RT T S L+C +C F+EE + +PNPS + + D
Sbjct: 17 QCDRTVTITPSPTSDLSCPNCQEGFLEECE--SPNPSSNPVDS-----GLGPAILLDEFA 69
Query: 1013 SLFSSIIDFAASIDDSSA-----------------PFAALRDIIQXXXXXXXXXXXXXXX 885
S+F + S ++S+ PFA L++ +Q
Sbjct: 70 SIFGGMAPTPRSSNNSTTTNSSSASPLFQDPDGFNPFAFLQNYLQTMRAGGANIQFVIEN 129
Query: 884 G---------------NVGDYYVGPGLEQLIQQLAENDPNRYGTPPASKAAVESLLDVVV 750
N+GDY++GPGLEQLIQQLAENDPNRYGTPPASK+AVE+L D+ V
Sbjct: 130 NSGMGGMDTTGFRLPANLGDYFIGPGLEQLIQQLAENDPNRYGTPPASKSAVENLPDIKV 189
Query: 749 TEGLLSIDEAQCSVCMDTFQMGAMAKKMPCSHVYHKDCILPWLELHNSCPVCRYELPTDD 570
T+ LL D +QC+VC D+F++G AK++PC H+YHKDCI PWLELHNSCPVCRYELPTDD
Sbjct: 190 TKELLESDSSQCAVCKDSFELGEEAKQIPCKHIYHKDCITPWLELHNSCPVCRYELPTDD 249
Query: 569 PDYEHYK 549
PDYE K
Sbjct: 250 PDYEQRK 256
>ref|XP_003534093.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoformX2 [Glycine
max] gi|571477964|ref|XP_006587425.1| PREDICTED: E3
ubiquitin-protein ligase RING1-like isoform X3 [Glycine
max] gi|571477966|ref|XP_006587426.1| PREDICTED: E3
ubiquitin-protein ligase RING1-like isoform X4 [Glycine
max]
Length = 376
Score = 199 bits (506), Expect = 2e-48
Identities = 110/235 (46%), Positives = 133/235 (56%), Gaps = 26/235 (11%)
Frame = -2
Query: 1184 QCSRTFTFV---GSGLACAHCHGDFVEELDILTPNPSXXXXXXXXXRFA----------- 1047
QC+RT + S L C C+G F+EEL+I P+P+
Sbjct: 24 QCNRTVSISPSPSSDLLCPTCNGGFLEELEIPIPDPNPPNPFFSDFPLGGAATIPLVLPG 83
Query: 1046 YDDSDVFDSIPSLFSSIIDFAASIDDSSAPFAALRDIIQXXXXXXXXXXXXXXXGNV--- 876
S F + +LF D AAS D+ P L++ Q
Sbjct: 84 AATSPPFGDLSALFGDRSDAAAS--DAFNPLVFLQNYFQTLRAGGGGNLQLVIESGDPGG 141
Query: 875 ---------GDYYVGPGLEQLIQQLAENDPNRYGTPPASKAAVESLLDVVVTEGLLSIDE 723
GDY+ GPGLE+LIQ LAENDPNRYGTPPASK+AVE L DV VTE LL+ D
Sbjct: 142 VFRFPGVTHGDYFFGPGLEELIQHLAENDPNRYGTPPASKSAVEGLPDVSVTEELLASDS 201
Query: 722 AQCSVCMDTFQMGAMAKKMPCSHVYHKDCILPWLELHNSCPVCRYELPTDDPDYE 558
+QC+VC DTF++G AK++PC H+YH DCILPWLELHNSCPVCRYELPTDDPDYE
Sbjct: 202 SQCAVCKDTFELGETAKQIPCKHIYHADCILPWLELHNSCPVCRYELPTDDPDYE 256
>ref|XP_002267134.1| PREDICTED: E3 ubiquitin-protein ligase RING1 isoform 1 [Vitis
vinifera] gi|359491811|ref|XP_003634328.1| PREDICTED: E3
ubiquitin-protein ligase RING1 isoform 2 [Vitis vinifera]
Length = 369
Score = 198 bits (504), Expect = 3e-48
Identities = 107/244 (43%), Positives = 138/244 (56%), Gaps = 34/244 (13%)
Frame = -2
Query: 1184 QCSRTFTFVGSGLA---CAHCHGDFVEELDILTPNPSXXXXXXXXXRFAYDDSDVFDSI- 1017
QC+ T + S + C HC+ F+EE++ PNP+ + D +
Sbjct: 29 QCNLTVSITPSPTSDPLCPHCNDGFLEEVE--NPNPNPIPVPIPNPFLGFSDLPSLSAAG 86
Query: 1016 -------PSLFSSI----IDFAASID---------DSSAPFAALRDI----------IQX 927
P +FS+ ID S+D D+ PFA L++ +Q
Sbjct: 87 ATATAFPPLVFSTAAGGSIDLQNSVDFPGLFGADPDAFHPFAFLQNYLQTLRAGGTNVQF 146
Query: 926 XXXXXXXXXXXXXXGNVGDYYVGPGLEQLIQQLAENDPNRYGTPPASKAAVESLLDVVVT 747
N+GDY++GPGLEQLIQQLAENDPNRYGTPPASK+A+E L + +T
Sbjct: 147 VIDGNSPEGTFRLSPNLGDYFIGPGLEQLIQQLAENDPNRYGTPPASKSAIEGLPTIRIT 206
Query: 746 EGLLSIDEAQCSVCMDTFQMGAMAKKMPCSHVYHKDCILPWLELHNSCPVCRYELPTDDP 567
LL D +QC+VC D+F++ AK+MPC H+YH DCILPWLELHNSCPVCRYELPTDDP
Sbjct: 207 VELLGTDSSQCAVCKDSFELDEEAKQMPCKHIYHNDCILPWLELHNSCPVCRYELPTDDP 266
Query: 566 DYEH 555
DYEH
Sbjct: 267 DYEH 270
>emb|CAN79596.1| hypothetical protein VITISV_042386 [Vitis vinifera]
Length = 371
Score = 198 bits (504), Expect = 3e-48
Identities = 107/244 (43%), Positives = 138/244 (56%), Gaps = 34/244 (13%)
Frame = -2
Query: 1184 QCSRTFTFVGSGLA---CAHCHGDFVEELDILTPNPSXXXXXXXXXRFAYDDSDVFDSI- 1017
QC+ T + S + C HC+ F+EE++ PNP+ + D +
Sbjct: 31 QCNLTVSITPSPTSDPLCPHCNDGFLEEVE--NPNPNPIPVPIPNPFLGFSDLPSLSAAG 88
Query: 1016 -------PSLFSSI----IDFAASID---------DSSAPFAALRDI----------IQX 927
P +FS+ ID S+D D+ PFA L++ +Q
Sbjct: 89 ATATAFPPLVFSTAAGGSIDLQNSVDFPGLFGADPDAFHPFAFLQNYLQTLRAGGTNVQF 148
Query: 926 XXXXXXXXXXXXXXGNVGDYYVGPGLEQLIQQLAENDPNRYGTPPASKAAVESLLDVVVT 747
N+GDY++GPGLEQLIQQLAENDPNRYGTPPASK+A+E L + +T
Sbjct: 149 VIDGNSPEGTFRLSPNLGDYFIGPGLEQLIQQLAENDPNRYGTPPASKSAIEGLPTIRIT 208
Query: 746 EGLLSIDEAQCSVCMDTFQMGAMAKKMPCSHVYHKDCILPWLELHNSCPVCRYELPTDDP 567
LL D +QC+VC D+F++ AK+MPC H+YH DCILPWLELHNSCPVCRYELPTDDP
Sbjct: 209 VELLGTDSSQCAVCKDSFELDEEAKQMPCKHIYHNDCILPWLELHNSCPVCRYELPTDDP 268
Query: 566 DYEH 555
DYEH
Sbjct: 269 DYEH 272
>ref|XP_006353939.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Solanum tuberosum]
Length = 387
Score = 196 bits (498), Expect = 2e-47
Identities = 109/254 (42%), Positives = 135/254 (53%), Gaps = 42/254 (16%)
Frame = -2
Query: 1184 QCSRTFTFV---GSGLACAHCHGDFVEELDILTPNPSXXXXXXXXXRFAYDDSDVFDSIP 1014
QC +T T S L+C +C+G F+EE + P+ DD P
Sbjct: 24 QCEQTVTITPSPNSELSCPNCNGTFLEESETAPPSNPNPNTHPFFSAATTDDLPFGGGFP 83
Query: 1013 SLFSSIIDF----AASIDDSSA---------------------PFAALRDIIQXXXXXXX 909
+FSS A DD SA PFA L +
Sbjct: 84 IVFSSNAASPAGGAVGFDDLSALFGGMAGGSAALPGRSPNQFDPFAFLNNYFSSMRGGNI 143
Query: 908 XXXXXXXXG--------------NVGDYYVGPGLEQLIQQLAENDPNRYGTPPASKAAVE 771
N+GDY++GPGLEQLIQQLAENDPNR+GTPPA+K+AV
Sbjct: 144 QLIFENHPDGGGGGAGGDFRIPGNLGDYFLGPGLEQLIQQLAENDPNRHGTPPAAKSAVA 203
Query: 770 SLLDVVVTEGLLSIDEAQCSVCMDTFQMGAMAKKMPCSHVYHKDCILPWLELHNSCPVCR 591
L D+ +TE LL D +QC+VC DTF++G AK++PC H+YHKDCI+PWLELHNSCPVCR
Sbjct: 204 GLPDIKITEELLDSDSSQCAVCKDTFELGMEAKQIPCKHIYHKDCIMPWLELHNSCPVCR 263
Query: 590 YELPTDDPDYEHYK 549
YELPTDDPDYE+ K
Sbjct: 264 YELPTDDPDYENRK 277
>ref|XP_004235401.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 1 [Solanum
lycopersicum] gi|460379301|ref|XP_004235402.1| PREDICTED:
E3 ubiquitin-protein ligase RING1-like isoform 2 [Solanum
lycopersicum]
Length = 383
Score = 196 bits (498), Expect = 2e-47
Identities = 109/254 (42%), Positives = 135/254 (53%), Gaps = 42/254 (16%)
Frame = -2
Query: 1184 QCSRTFTFV---GSGLACAHCHGDFVEELDILTPNPSXXXXXXXXXRFAYDDSDVFDSIP 1014
QC +T T S L+C +C+G F+EE + P+ DD P
Sbjct: 24 QCEQTVTITPSPNSELSCPNCNGTFLEESETAPPSNPNPNTHPFFSAATTDDLPFGGGFP 83
Query: 1013 SLFSSIIDF----AASIDDSSA---------------------PFAALRDIIQXXXXXXX 909
+FSS A DD SA PFA L +
Sbjct: 84 IVFSSNAASPAGGAVGFDDLSALFGGMAGGSAALPGRSPNQFDPFAFLNNYFSSMRGGNI 143
Query: 908 XXXXXXXXG--------------NVGDYYVGPGLEQLIQQLAENDPNRYGTPPASKAAVE 771
N+GDY++GPGLEQLIQQLAENDPNR+GTPPA+K+AV
Sbjct: 144 QLIFENHPDGGGGGAGGDFRIPGNLGDYFLGPGLEQLIQQLAENDPNRHGTPPAAKSAVA 203
Query: 770 SLLDVVVTEGLLSIDEAQCSVCMDTFQMGAMAKKMPCSHVYHKDCILPWLELHNSCPVCR 591
L D+ +TE LL D +QC+VC DTF++G AK++PC H+YHKDCI+PWLELHNSCPVCR
Sbjct: 204 GLPDIKITEELLDSDSSQCAVCKDTFELGMEAKQIPCKHIYHKDCIMPWLELHNSCPVCR 263
Query: 590 YELPTDDPDYEHYK 549
YELPTDDPDYE+ K
Sbjct: 264 YELPTDDPDYENRK 277
>ref|XP_004137524.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 1 [Cucumis
sativus] gi|449439503|ref|XP_004137525.1| PREDICTED: E3
ubiquitin-protein ligase RING1-like isoform 2 [Cucumis
sativus] gi|449439505|ref|XP_004137526.1| PREDICTED: E3
ubiquitin-protein ligase RING1-like isoform 3 [Cucumis
sativus] gi|449503086|ref|XP_004161827.1| PREDICTED: E3
ubiquitin-protein ligase RING1-like isoform 1 [Cucumis
sativus] gi|449503089|ref|XP_004161828.1| PREDICTED: E3
ubiquitin-protein ligase RING1-like isoform 2 [Cucumis
sativus] gi|449503091|ref|XP_004161829.1| PREDICTED: E3
ubiquitin-protein ligase RING1-like isoform 3 [Cucumis
sativus]
Length = 378
Score = 194 bits (492), Expect = 8e-47
Identities = 109/250 (43%), Positives = 141/250 (56%), Gaps = 42/250 (16%)
Frame = -2
Query: 1181 CSRTFTFV---GSGLACAHCHGDFVEELDILTPNPSXXXXXXXXXRFAYDDSDVFDS--- 1020
C+RT T S L C +C+ FVEE++ +PNP+ F + F +
Sbjct: 29 CNRTVTITPSSSSDLLCPNCNDSFVEEME--SPNPNPSPVSNPFLSFTSEAFPPFSTGGG 86
Query: 1019 ----IPSLFSS-------------IIDFAA-----SIDDSSA--------PFAALRDIIQ 930
P +FS+ + D +A S+ SS+ P L++ +Q
Sbjct: 87 GNGGFPIIFSTTSSSGGIGGGGSMMNDLSALLGGGSLRSSSSLQNPDGFNPLLFLQNYLQ 146
Query: 929 XXXXXXXXXXXXXXXG------NVGDYYVGPGLEQLIQQLAENDPNRYGTPPASKAAVES 768
N+GDY+ GPGLEQLIQQLAENDPNRYGTPPASK+A+E
Sbjct: 147 SANVQLVIQNASGEAFHPPSNFNLGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIEG 206
Query: 767 LLDVVVTEGLLSIDEAQCSVCMDTFQMGAMAKKMPCSHVYHKDCILPWLELHNSCPVCRY 588
L D+ +TE LL+ D +QC+VC DTF++ +AK MPC H+YH DCI+PWLELHNSCPVCRY
Sbjct: 207 LPDIKITEELLATDSSQCAVCKDTFELDEVAKLMPCKHIYHADCIIPWLELHNSCPVCRY 266
Query: 587 ELPTDDPDYE 558
ELPTDDPDYE
Sbjct: 267 ELPTDDPDYE 276
>ref|XP_003620252.1| RING finger protein [Medicago truncatula] gi|355495267|gb|AES76470.1|
RING finger protein [Medicago truncatula]
Length = 340
Score = 191 bits (484), Expect = 7e-46
Identities = 103/229 (44%), Positives = 129/229 (56%), Gaps = 20/229 (8%)
Frame = -2
Query: 1184 QCSRT--FTFVGSGLACAHCHGDFVEELDILTPNPSXXXXXXXXXRFAYDDSDVFDSIPS 1011
QC RT + + L C +C+ F+EEL+ PNP+ + F S P
Sbjct: 26 QCERTSLISTTSTDLICPNCNSSFIEELESPIPNPNPNPLPPFFSHTTEFPAGGF-SFPM 84
Query: 1010 LFSSIIDFAASIDDSSAPFAALRDIIQ------------------XXXXXXXXXXXXXXX 885
LFS A+ ++ P A +++ ++
Sbjct: 85 LFSGNGAPTATATEAFNPMAFIQNYLRNMNAGGGGGGGIQFVINDGDEPGRFRFPGFPGN 144
Query: 884 GNVGDYYVGPGLEQLIQQLAENDPNRYGTPPASKAAVESLLDVVVTEGLLSIDEAQCSVC 705
N+GDY+ GPGLE LIQQLAENDPNR GTPPASK+AVE L + VT LL D +QC+VC
Sbjct: 145 ANLGDYFFGPGLEDLIQQLAENDPNRRGTPPASKSAVEKLPVIEVTGELLESDSSQCAVC 204
Query: 704 MDTFQMGAMAKKMPCSHVYHKDCILPWLELHNSCPVCRYELPTDDPDYE 558
DTF +G AK+MPC H+YH DCILPWLELHNSCPVCR+ELPTDDPDYE
Sbjct: 205 KDTFALGEKAKQMPCKHIYHDDCILPWLELHNSCPVCRFELPTDDPDYE 253
>sp|P0CH30.1|RING1_GOSHI RecName: Full=E3 ubiquitin-protein ligase RING1; AltName: Full=RING
finger protein 1 gi|298155591|gb|ADI58769.1| RING-type
ubiquitin E3 ligase [Gossypium hirsutum]
Length = 338
Score = 188 bits (478), Expect = 3e-45
Identities = 110/250 (44%), Positives = 137/250 (54%), Gaps = 41/250 (16%)
Frame = -2
Query: 1184 QCSRTFTFV----GSGLACAHCHGDFVEELDILTPNPSXXXXXXXXXRFAYDD-----SD 1032
QC+RT S C C+ F+EE D PN + D SD
Sbjct: 27 QCNRTVNVTISPPSSDPTCPICNEGFLEEYDNPNPNQGSGFLNPNPNSIPFHDLFLTLSD 86
Query: 1031 VFDSI-----PSLFSSIIDFAASIDDSSA------------PFAA---------LRDI-- 936
F S+ PS S+ +ASID ++ PFA L D+
Sbjct: 87 PFASLLPLLFPSSSSTTTSSSASIDPNNPSLSGPTRSGRGDPFAFDPFTFIQNHLNDLRS 146
Query: 935 ----IQXXXXXXXXXXXXXXXGNVGDYYVGPGLEQLIQQLAENDPNRYGTPPASKAAVES 768
I+ N+GDY++GPGLEQLIQQLAENDPNRYGTPPASK+A+E+
Sbjct: 147 SGAQIEFVIQNNPSDQGFRLPANIGDYFIGPGLEQLIQQLAENDPNRYGTPPASKSAIEA 206
Query: 767 LLDVVVTEGLLSIDEAQCSVCMDTFQMGAMAKKMPCSHVYHKDCILPWLELHNSCPVCRY 588
L V +T+ L+ + QC+VCMD F+ G AK+MPC H+YHKDC+LPWLELHNSCPVCR+
Sbjct: 207 LPLVNITKSNLNSEFNQCAVCMDDFEEGTEAKQMPCKHLYHKDCLLPWLELHNSCPVCRH 266
Query: 587 ELPTDDPDYE 558
ELPTDDPDYE
Sbjct: 267 ELPTDDPDYE 276
>ref|XP_006847820.1| hypothetical protein AMTR_s00029p00043520 [Amborella trichopoda]
gi|548851125|gb|ERN09401.1| hypothetical protein
AMTR_s00029p00043520 [Amborella trichopoda]
Length = 366
Score = 187 bits (474), Expect = 9e-45
Identities = 102/228 (44%), Positives = 132/228 (57%), Gaps = 19/228 (8%)
Frame = -2
Query: 1184 QCSRTFTFV-----GSGLACAHCHGDFVEELDILTPN-PSXXXXXXXXXRFAYDDSDVFD 1023
QCSRT + L C +CHG F+EEL+ P+ P+ + +
Sbjct: 19 QCSRTVYLSPPPSGSADLVCPNCHGGFLEELESPPPSIPNPFLNFFEPFSGHFSGRERIF 78
Query: 1022 SIPSLFSSIIDFAASIDDSSAPFAA-----LRDIIQXXXXXXXXXXXXXXXGN------- 879
+ PS S D ++ D S P L+D +Q +
Sbjct: 79 APPSRPISNPDDVFAVHDQSDPMVFNPLIFLQDYLQTLVQGRPNFQVVFETSDNAAPAGF 138
Query: 878 -VGDYYVGPGLEQLIQQLAENDPNRYGTPPASKAAVESLLDVVVTEGLLSIDEAQCSVCM 702
+ DY+VGPGLEQLIQ LAENDPNRYGTPPAS++A++SL +V V+ LL+ D +QC+VC
Sbjct: 139 RLNDYFVGPGLEQLIQHLAENDPNRYGTPPASESAIDSLPEVRVSSELLNSDTSQCAVCK 198
Query: 701 DTFQMGAMAKKMPCSHVYHKDCILPWLELHNSCPVCRYELPTDDPDYE 558
D F+ G+ AK++PC H+YH DCILPWLELHNSCPVCRYELPTDD DYE
Sbjct: 199 DAFEEGSFAKQLPCKHIYHGDCILPWLELHNSCPVCRYELPTDDQDYE 246
>gb|EOX99086.1| RING/U-box superfamily protein, putative [Theobroma cacao]
Length = 343
Score = 186 bits (472), Expect = 2e-44
Identities = 80/108 (74%), Positives = 95/108 (87%)
Frame = -2
Query: 881 NVGDYYVGPGLEQLIQQLAENDPNRYGTPPASKAAVESLLDVVVTEGLLSIDEAQCSVCM 702
N+GDY++GPGLEQLIQQLAENDPNRYGTPPASK+A++SL V +T+ L+ + QC+VCM
Sbjct: 169 NIGDYFIGPGLEQLIQQLAENDPNRYGTPPASKSAIDSLPSVKITKNHLNSEFNQCAVCM 228
Query: 701 DTFQMGAMAKKMPCSHVYHKDCILPWLELHNSCPVCRYELPTDDPDYE 558
D F+ G AK+MPC H+YHKDCILPWLELHNSCPVCR+ELPTDDPDYE
Sbjct: 229 DEFEEGTQAKQMPCKHLYHKDCILPWLELHNSCPVCRHELPTDDPDYE 276
>ref|XP_004515274.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform X1 [Cicer
arietinum] gi|502173208|ref|XP_004515275.1| PREDICTED: E3
ubiquitin-protein ligase RING1-like isoform X2 [Cicer
arietinum] gi|502173212|ref|XP_004515276.1| PREDICTED: E3
ubiquitin-protein ligase RING1-like isoform X3 [Cicer
arietinum]
Length = 349
Score = 185 bits (470), Expect = 3e-44
Identities = 107/242 (44%), Positives = 133/242 (54%), Gaps = 33/242 (13%)
Frame = -2
Query: 1184 QCSRTFTFVGSG---LACAHCHGDFVEELDILTPNPSXXXXXXXXXRFAYDDSD------ 1032
QC RT F+ + L C +C+G F+EEL+ PNP+ F +D
Sbjct: 24 QCERT-AFISTSSTDLICPNCNGTFLEELETPIPNPNPNPNPNPIPPFFSYTTDFPAANF 82
Query: 1031 ---VFDSIPSLFSSIIDFAASIDDSSAPF-------AALRDIIQXXXXXXXXXXXXXXXG 882
+ +S P S++ S ++PF A +++ +Q
Sbjct: 83 SFPIGNSQPLEDLSVLFGNRSSPSPASPFGQAFNPVAFIQNYLQNIRPGAGGNVQFFIDD 142
Query: 881 --------------NVGDYYVGPGLEQLIQQLAENDPNRYGTPPASKAAVESLLDVVVTE 744
N GDY+ GPGLE LIQQLAENDP+R GTPPASK+AVE L + VTE
Sbjct: 143 ADDPTGPFRFPGNANPGDYFFGPGLEDLIQQLAENDPSRRGTPPASKSAVEKLPVISVTE 202
Query: 743 GLLSIDEAQCSVCMDTFQMGAMAKKMPCSHVYHKDCILPWLELHNSCPVCRYELPTDDPD 564
LL D AQC+VC DTF +G AK+MPC H+YH DCILPWLELHNSCPVCRYELPTDD D
Sbjct: 203 ELLESDSAQCAVCKDTFALGEKAKQMPCKHIYHTDCILPWLELHNSCPVCRYELPTDDAD 262
Query: 563 YE 558
YE
Sbjct: 263 YE 264
>ref|XP_002883213.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297329053|gb|EFH59472.1| zinc finger family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 330
Score = 184 bits (466), Expect = 8e-44
Identities = 106/248 (42%), Positives = 136/248 (54%), Gaps = 38/248 (15%)
Frame = -2
Query: 1184 QCSRTFTFVGSGLA---CAHCHGDFVEELDILTPNPSXXXXXXXXXRFAYDDSDVFDSI- 1017
QC+RT T S A C C+ F+EE + PNPS + +D F ++
Sbjct: 25 QCNRTVTISISSSADPFCPICNQGFLEEYEDPNPNPSLNFNPNSVDSL-FPMADPFSTLL 83
Query: 1016 PSLFSSIIDFAASID------------------------DSSAPFAALRDI--------- 936
P LF S + ID D+ PF L++
Sbjct: 84 PLLFGSSAASPSGIDLMSSSFFAPSMQPQARSTQQNPQSDAFDPFTFLQNHLQNLRSSGT 143
Query: 935 -IQXXXXXXXXXXXXXXXGNVGDYYVGPGLEQLIQQLAENDPNRYGTPPASKAAVESLLD 759
+Q GN GDY+ GPGLEQLIQQLAENDPNRYGTPPASK+A++ L
Sbjct: 144 HVQFVIENHPSDLGNRMPGNFGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIDGLPT 203
Query: 758 VVVTEGLLSIDEAQCSVCMDTFQMGAMAKKMPCSHVYHKDCILPWLELHNSCPVCRYELP 579
V VT+ +L + QC+VCMD F+ G+ K+MPC HV+H+DC+LPWL+LHNSCPVCR+ELP
Sbjct: 204 VKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLQLHNSCPVCRFELP 263
Query: 578 TDDPDYEH 555
TDDPDYE+
Sbjct: 264 TDDPDYEN 271
>gb|ACT21194.1| zinc finger protein [Carica papaya]
Length = 340
Score = 184 bits (466), Expect = 8e-44
Identities = 100/241 (41%), Positives = 131/241 (54%), Gaps = 31/241 (12%)
Frame = -2
Query: 1184 QCSRTFTFV-----GSGLACAHCHGDFVEELDILTPNPSXXXXXXXXXRFAYDDSD---- 1032
QC+RT S L C C+G F+EEL+ PN F + S
Sbjct: 12 QCNRTVRISPSPCPSSDLLCPTCNGGFLEELENPNPNQQTLNLNPFDSPFPFLSSPNSPH 71
Query: 1031 VFDSIPSLFSSII---DFAASIDDSSA--PFAALRDIIQXXXXXXXXXXXXXXXG----- 882
FD + + F ++ A +D+ PF L++ +Q
Sbjct: 72 PFDDLSAFFGGMVPPPSATARPNDTEVFNPFLFLQNYLQTLRANGANIQFVIENNSPGGS 131
Query: 881 ------------NVGDYYVGPGLEQLIQQLAENDPNRYGTPPASKAAVESLLDVVVTEGL 738
N+GDY++GPGLEQLIQQLAENDPNR+GTPPASK+A+E+L + + + +
Sbjct: 132 GPSGAFRLPGSLNLGDYFLGPGLEQLIQQLAENDPNRHGTPPASKSAIEALPTIKIFQEM 191
Query: 737 LSIDEAQCSVCMDTFQMGAMAKKMPCSHVYHKDCILPWLELHNSCPVCRYELPTDDPDYE 558
D +QC+VC D+F + AK+MPC H+YH CILPWLELHNSCPVCRYELPTDD DYE
Sbjct: 192 PDSDSSQCAVCKDSFALAEEAKQMPCKHIYHSQCILPWLELHNSCPVCRYELPTDDADYE 251
Query: 557 H 555
H
Sbjct: 252 H 252