BLASTX nr result

ID: Zingiber25_contig00024739 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00024739
         (358 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001268172.1| zinc finger protein-like [Vitis vinifera] gi...    83   4e-14
ref|XP_001767808.1| predicted protein [Physcomitrella patens] gi...    78   1e-12
ref|XP_001759720.1| predicted protein [Physcomitrella patens] gi...    77   3e-12
ref|XP_001756411.1| predicted protein [Physcomitrella patens] gi...    72   6e-11
ref|XP_001783430.1| predicted protein [Physcomitrella patens] gi...    69   7e-10
ref|XP_004242261.1| PREDICTED: uncharacterized protein LOC101262...    67   2e-09
gb|ADL36668.1| COL domain class transcription factor [Malus dome...    66   4e-09
ref|XP_006427763.1| hypothetical protein CICLE_v10026364mg [Citr...    64   2e-08
ref|XP_006465171.1| PREDICTED: uncharacterized protein LOC102616...    63   4e-08
ref|XP_002316440.1| zinc finger family protein [Populus trichoca...    63   4e-08
ref|XP_004972714.1| PREDICTED: zinc finger protein HD1-like [Set...    63   5e-08
ref|XP_002445155.1| hypothetical protein SORBIDRAFT_07g004973 [S...    63   5e-08
ref|XP_003571406.1| PREDICTED: uncharacterized protein LOC100830...    62   6e-08
gb|ESW04595.1| hypothetical protein PHAVU_011G108800g [Phaseolus...    62   8e-08
ref|XP_002311907.2| zinc finger family protein [Populus trichoca...    62   8e-08
ref|XP_002994205.1| hypothetical protein SELMODRAFT_449329 [Sela...    62   8e-08
ref|XP_006279498.1| hypothetical protein CARUB_v10027109mg [Caps...    62   1e-07
gb|EMJ17906.1| hypothetical protein PRUPE_ppa026514mg, partial [...    62   1e-07
ref|NP_001169514.1| uncharacterized LOC100383388 [Zea mays] gi|2...    62   1e-07
gb|ABK96678.1| unknown [Populus trichocarpa x Populus deltoides]       62   1e-07

>ref|NP_001268172.1| zinc finger protein-like [Vitis vinifera]
           gi|307707121|gb|ADN87331.1| zinc finger protein-like
           protein [Vitis vinifera]
          Length = 260

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 48/104 (46%), Positives = 53/104 (50%)
 Frame = -1

Query: 340 RVCELCGGXXXXXXXXXXAHLCWSCDAHVHGANFLVARHLRQVACTSCGALDDDRLFAGA 161
           RVCELC            A LCWSCDA VHGANFLVARH+R   C+ C  L  D  F G 
Sbjct: 4   RVCELCNEEASLYCGSDSAFLCWSCDARVHGANFLVARHVRHTLCSECNGLAGDTFF-GV 62

Query: 160 GSPAPIRSLCGSCXXXXXXXXXXXXXXADEESDTESCVSTAESA 29
           G   P R +C SC               D +S + SCVST ESA
Sbjct: 63  GF-QPHRLICRSC---SSEVESETSTDHDSKSSSSSCVSTTESA 102


>ref|XP_001767808.1| predicted protein [Physcomitrella patens]
           gi|162680890|gb|EDQ67322.1| predicted protein
           [Physcomitrella patens]
          Length = 374

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 38/73 (52%), Positives = 43/73 (58%)
 Frame = -1

Query: 340 RVCELCGGXXXXXXXXXXAHLCWSCDAHVHGANFLVARHLRQVACTSCGALDDDRLFAGA 161
           R CELC G          AH+CWSCDA VHGANFLVARH R V C +CG +   R   GA
Sbjct: 6   RKCELCDGAAALYCAADNAHICWSCDAKVHGANFLVARHTRSVLCKTCG-ISTTRRTTGA 64

Query: 160 GSPAPIRSLCGSC 122
            +P P+  LC  C
Sbjct: 65  -NPTPLTGLCSGC 76


>ref|XP_001759720.1| predicted protein [Physcomitrella patens]
           gi|162689259|gb|EDQ75632.1| predicted protein
           [Physcomitrella patens]
          Length = 554

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 36/76 (47%), Positives = 42/76 (55%)
 Frame = -1

Query: 349 RRRRVCELCGGXXXXXXXXXXAHLCWSCDAHVHGANFLVARHLRQVACTSCGALDDDRLF 170
           +  RVCELC G          AH+CW+CDA VH ANFLVARH R V C  CG     +  
Sbjct: 3   KSNRVCELCDGVADLYCAADEAHICWTCDAKVHSANFLVARHTRLVLCEICGIQTPWK-- 60

Query: 169 AGAGSPAPIRSLCGSC 122
           A  G+P P+  LC  C
Sbjct: 61  ASGGNPTPLTGLCAEC 76


>ref|XP_001756411.1| predicted protein [Physcomitrella patens]
           gi|162692450|gb|EDQ78807.1| predicted protein
           [Physcomitrella patens]
          Length = 593

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 34/76 (44%), Positives = 39/76 (51%)
 Frame = -1

Query: 349 RRRRVCELCGGXXXXXXXXXXAHLCWSCDAHVHGANFLVARHLRQVACTSCGALDDDRLF 170
           R    CELC G          AH+CW CDA VH ANFLVARH R V C +CG     R  
Sbjct: 219 RTNTACELCDGVAALYCEADEAHICWICDAKVHSANFLVARHTRSVLCGTCGTQTSWR-- 276

Query: 169 AGAGSPAPIRSLCGSC 122
           A   +P P+  +C  C
Sbjct: 277 ASGANPTPLPGVCAEC 292


>ref|XP_001783430.1| predicted protein [Physcomitrella patens]
           gi|162665073|gb|EDQ51770.1| predicted protein
           [Physcomitrella patens]
          Length = 412

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 32/76 (42%), Positives = 40/76 (52%)
 Frame = -1

Query: 349 RRRRVCELCGGXXXXXXXXXXAHLCWSCDAHVHGANFLVARHLRQVACTSCGALDDDRLF 170
           +  R CELC            A++CW+CDA VHGANFLVARH R V C +CG     R+ 
Sbjct: 3   KMHRGCELCDSVACLYCSADEAYICWTCDAKVHGANFLVARHTRSVLCGTCGISTPWRI- 61

Query: 169 AGAGSPAPIRSLCGSC 122
               +P P+   C  C
Sbjct: 62  -SGANPTPLTGFCTDC 76


>ref|XP_004242261.1| PREDICTED: uncharacterized protein LOC101262021 [Solanum
           lycopersicum]
          Length = 261

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 38/104 (36%), Positives = 50/104 (48%)
 Frame = -1

Query: 340 RVCELCGGXXXXXXXXXXAHLCWSCDAHVHGANFLVARHLRQVACTSCGALDDDRLFAGA 161
           ++CELC            A LC+ CDA VH ANFLVARHLR   C+ C +L   R F+  
Sbjct: 7   KLCELCNDQAALFCPSDSAFLCFHCDAKVHQANFLVARHLRLTLCSHCNSLTKKR-FSPC 65

Query: 160 GSPAPIRSLCGSCXXXXXXXXXXXXXXADEESDTESCVSTAESA 29
             P P  +LC SC                  S + +CVS+ +S+
Sbjct: 66  SPPPP--ALCPSCSRNSSGDSDLRSVSTTSSSSSSTCVSSTQSS 107


>gb|ADL36668.1| COL domain class transcription factor [Malus domestica]
          Length = 271

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 38/105 (36%), Positives = 47/105 (44%)
 Frame = -1

Query: 340 RVCELCGGXXXXXXXXXXAHLCWSCDAHVHGANFLVARHLRQVACTSCGALDDDRLFAGA 161
           R CELC            A LC  CDA VH ANFLVARHLRQ  C++C ++   R     
Sbjct: 6   RACELCDQEASFYCPSDSAFLCSRCDARVHQANFLVARHLRQPLCSNCKSVAGTR----- 60

Query: 160 GSPAPIRSLCGSCXXXXXXXXXXXXXXADEESDTESCVSTAESAT 26
                + SLC SC              +   SD  +C+S+ E  T
Sbjct: 61  ----DLHSLCSSCSPEFFSGDCDGDAKSSSSSDCSACISSTEMGT 101


>ref|XP_006427763.1| hypothetical protein CICLE_v10026364mg [Citrus clementina]
           gi|557529753|gb|ESR41003.1| hypothetical protein
           CICLE_v10026364mg [Citrus clementina]
          Length = 243

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 39/114 (34%), Positives = 54/114 (47%), Gaps = 3/114 (2%)
 Frame = -1

Query: 343 RRVCELCGGXXXXXXXXXXAHLCWSCDAHVHGANFLVARHLRQVACTSCGALDDDRLFAG 164
           +R CELC            A LC+ CD  VH ANFLVARH+RQ  C+ C +L   +  +G
Sbjct: 2   KRACELCSQEAALHCASDEAFLCFDCDDRVHKANFLVARHVRQTLCSQCKSL-TGKFISG 60

Query: 163 AGSPAPIRSLCGSCXXXXXXXXXXXXXXADEESDTESCVSTAESATA---GRRR 11
             S + +  +C SC              +   S +  C+S+ ES+ A   GR R
Sbjct: 61  ERSSSSLVPICPSC-------------CSSTTSTSSDCISSTESSAAEKMGRER 101


>ref|XP_006465171.1| PREDICTED: uncharacterized protein LOC102616615 [Citrus sinensis]
          Length = 243

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 39/114 (34%), Positives = 54/114 (47%), Gaps = 3/114 (2%)
 Frame = -1

Query: 343 RRVCELCGGXXXXXXXXXXAHLCWSCDAHVHGANFLVARHLRQVACTSCGALDDDRLFAG 164
           +R CELC            A LC+ CD  VH ANFLVARH+RQ  C+ C +L   +  +G
Sbjct: 2   KRACELCSQEAALHCASDEAFLCFDCDDRVHKANFLVARHVRQTLCSQCKSL-TGKFISG 60

Query: 163 AGSPAPIRSLCGSCXXXXXXXXXXXXXXADEESDTESCVSTAESATA---GRRR 11
             S + +  +C SC              +   S +  C+S+ ES+ A   GR R
Sbjct: 61  ELSSSSLVPICPSC-------------CSSTTSTSSDCISSTESSAAEKMGRER 101


>ref|XP_002316440.1| zinc finger family protein [Populus trichocarpa]
           gi|222865480|gb|EEF02611.1| zinc finger family protein
           [Populus trichocarpa]
          Length = 249

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 38/106 (35%), Positives = 58/106 (54%)
 Frame = -1

Query: 340 RVCELCGGXXXXXXXXXXAHLCWSCDAHVHGANFLVARHLRQVACTSCGALDDDRLFAGA 161
           +VCELC            A+LC+ CD++VH ANFLVARH R+V C+ CG++  +  F+G 
Sbjct: 4   KVCELCRREAGVYCDSDAAYLCFDCDSNVHNANFLVARHARRVICSGCGSITGNP-FSG- 61

Query: 160 GSPAPIRSLCGSCXXXXXXXXXXXXXXADEESDTESCVSTAESATA 23
            +P+  R  C SC               ++E D+ SC S++  ++A
Sbjct: 62  HTPSLSRVTCCSC------------SPGNKELDSISCSSSSTLSSA 95


>ref|XP_004972714.1| PREDICTED: zinc finger protein HD1-like [Setaria italica]
          Length = 260

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 33/71 (46%), Positives = 34/71 (47%)
 Frame = -1

Query: 334 CELCGGXXXXXXXXXXAHLCWSCDAHVHGANFLVARHLRQVACTSCGALDDDRLFAGAGS 155
           CELCG           A LCW CDA VHGANFLVARH R + C  C      R  A    
Sbjct: 19  CELCGAAARVYCCADEATLCWGCDAQVHGANFLVARHARTLLCRGCARPTPWR--AAGPR 76

Query: 154 PAPIRSLCGSC 122
             P  SLC  C
Sbjct: 77  LGPTASLCDRC 87


>ref|XP_002445155.1| hypothetical protein SORBIDRAFT_07g004973 [Sorghum bicolor]
           gi|241941505|gb|EES14650.1| hypothetical protein
           SORBIDRAFT_07g004973 [Sorghum bicolor]
          Length = 271

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 33/71 (46%), Positives = 34/71 (47%)
 Frame = -1

Query: 334 CELCGGXXXXXXXXXXAHLCWSCDAHVHGANFLVARHLRQVACTSCGALDDDRLFAGAGS 155
           CELCG           A LCW CDA VHGANFLVARH R + C  C      R  A    
Sbjct: 24  CELCGAAARVYCGADEATLCWGCDAQVHGANFLVARHARALLCRGCARPTPWR--AAGPR 81

Query: 154 PAPIRSLCGSC 122
             P  SLC  C
Sbjct: 82  LGPTASLCDRC 92


>ref|XP_003571406.1| PREDICTED: uncharacterized protein LOC100830331 [Brachypodium
           distachyon]
          Length = 229

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 33/71 (46%), Positives = 34/71 (47%)
 Frame = -1

Query: 334 CELCGGXXXXXXXXXXAHLCWSCDAHVHGANFLVARHLRQVACTSCGALDDDRLFAGAGS 155
           CELCG           A LCW CDA VHGANFLVARH R + C  C      R  A    
Sbjct: 18  CELCGAAARVYCCADDATLCWGCDAQVHGANFLVARHARALLCRGCARPTPWR--AAGPR 75

Query: 154 PAPIRSLCGSC 122
             P  SLC  C
Sbjct: 76  LGPTASLCERC 86


>gb|ESW04595.1| hypothetical protein PHAVU_011G108800g [Phaseolus vulgaris]
          Length = 184

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 36/93 (38%), Positives = 41/93 (44%)
 Frame = -1

Query: 334 CELCGGXXXXXXXXXXAHLCWSCDAHVHGANFLVARHLRQVACTSCGALDDDRLFAGAGS 155
           CELC            A LCW CDA VHGANFLVARH R + C +C +    +  A    
Sbjct: 4   CELCKLPARIFCESDQASLCWDCDAKVHGANFLVARHSRTLLCRTCHSSTPWK--ASGAR 61

Query: 154 PAPIRSLCGSCXXXXXXXXXXXXXXADEESDTE 56
            A   S+C  C               DEE DTE
Sbjct: 62  LANAASICNRCAASTAEEQDETESGNDEEPDTE 94


>ref|XP_002311907.2| zinc finger family protein [Populus trichocarpa]
           gi|550332086|gb|EEE89274.2| zinc finger family protein
           [Populus trichocarpa]
          Length = 250

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 35/103 (33%), Positives = 54/103 (52%)
 Frame = -1

Query: 340 RVCELCGGXXXXXXXXXXAHLCWSCDAHVHGANFLVARHLRQVACTSCGALDDDRLFAGA 161
           +VCELC            A LC+ CD++VH ANF+V+RHLR+V C++C +L     F+G 
Sbjct: 4   KVCELCQREAGLYCDSDAAFLCFECDSNVHNANFVVSRHLRRVICSACNSLTGGS-FSGT 62

Query: 160 GSPAPIRSLCGSCXXXXXXXXXXXXXXADEESDTESCVSTAES 32
            +P+  R  C SC              +   + + +C+ST E+
Sbjct: 63  -APSLRRVTCLSCSPENKELDSISCSSSCSSTLSSACISTTET 104


>ref|XP_002994205.1| hypothetical protein SELMODRAFT_449329 [Selaginella moellendorffii]
           gi|300137916|gb|EFJ04710.1| hypothetical protein
           SELMODRAFT_449329 [Selaginella moellendorffii]
          Length = 263

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 32/76 (42%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
 Frame = -1

Query: 346 RRRVCELCGGXXXXXXXXXXAHLCWSCDAHVHGANFLVARHLRQVACTSCGALDDDRLFA 167
           + R CELC            A+LCW CD+ VHGANF+VARHLR + C  C +     + A
Sbjct: 3   KSRDCELCQVRAAVYCCADEAYLCWKCDSKVHGANFIVARHLRSILCGRCHS--PTAVLA 60

Query: 166 GAGSPAPIRS-LCGSC 122
            +  P P  S LC +C
Sbjct: 61  ESSPPGPCSSPLCPTC 76


>ref|XP_006279498.1| hypothetical protein CARUB_v10027109mg [Capsella rubella]
           gi|482548202|gb|EOA12396.1| hypothetical protein
           CARUB_v10027109mg [Capsella rubella]
          Length = 217

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 31/74 (41%), Positives = 40/74 (54%)
 Frame = -1

Query: 343 RRVCELCGGXXXXXXXXXXAHLCWSCDAHVHGANFLVARHLRQVACTSCGALDDDRLFAG 164
           ++ CELC G          A LCW CD  VHGANFLVA+H R + C++C +L   +  A 
Sbjct: 3   KKKCELCNGVARMYCESDDASLCWDCDGKVHGANFLVAKHTRCLLCSACQSLTPWK--AS 60

Query: 163 AGSPAPIRSLCGSC 122
                P  S+C SC
Sbjct: 61  GLRLRPTVSICESC 74


>gb|EMJ17906.1| hypothetical protein PRUPE_ppa026514mg, partial [Prunus persica]
          Length = 169

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 39/106 (36%), Positives = 45/106 (42%), Gaps = 1/106 (0%)
 Frame = -1

Query: 346 RRRVCELCGGXXXXXXXXXXAHLCWSCDAHVHGANFLVARHLRQVACTSCGALDDDRLFA 167
           + RVCELC            A LC  CDA VH ANFLVARH+RQ  C +C  L   R   
Sbjct: 2   KARVCELCDQEASLYCPSDSAFLCSRCDARVHQANFLVARHIRQYICYNCKGLTGSR--- 58

Query: 166 GAGSPAPIRSLCGSCXXXXXXXXXXXXXXADEESDT-ESCVSTAES 32
                  IRS C SC                  S    +CVS+ +S
Sbjct: 59  ------NIRSFCSSCSPDNFSGHGNGDGDTQSSSSACSACVSSTDS 98


>ref|NP_001169514.1| uncharacterized LOC100383388 [Zea mays] gi|224029811|gb|ACN33981.1|
           unknown [Zea mays] gi|413921174|gb|AFW61106.1| putative
           B-box type zinc finger family protein [Zea mays]
          Length = 263

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 33/71 (46%), Positives = 34/71 (47%)
 Frame = -1

Query: 334 CELCGGXXXXXXXXXXAHLCWSCDAHVHGANFLVARHLRQVACTSCGALDDDRLFAGAGS 155
           CELCG           A LCW CDA VHGANFLVARH R + C  C      R  A    
Sbjct: 28  CELCGAAARVYCGADEATLCWGCDAQVHGANFLVARHARSLLCRGCARPTPWR--AAGPR 85

Query: 154 PAPIRSLCGSC 122
             P  SLC  C
Sbjct: 86  LGPTVSLCVRC 96


>gb|ABK96678.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 220

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 33/72 (45%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
 Frame = -1

Query: 334 CELCGGXXXXXXXXXXAHLCWSCDAHVHGANFLVARHLRQVACTSCGALDDDRLFAGAGS 155
           CELCGG          A LCW CD  VH ANFLVA+H R + C  C        +  +GS
Sbjct: 4   CELCGGSARMFCESDQASLCWDCDEKVHSANFLVAKHCRTLLCQVC---QSPTPWKSSGS 60

Query: 154 P-APIRSLCGSC 122
             API S+C SC
Sbjct: 61  KLAPIVSVCESC 72


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