BLASTX nr result
ID: Zingiber25_contig00024696
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00024696
(283 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001054461.1| Os05g0114500 [Oryza sativa Japonica Group] g... 103 2e-20
gb|EAY96296.1| hypothetical protein OsI_18195 [Oryza sativa Indi... 103 2e-20
ref|XP_006653974.1| PREDICTED: protein gar2-like [Oryza brachyan... 100 3e-19
gb|ABK24023.1| unknown [Picea sitchensis] 99 6e-19
ref|XP_003536770.1| PREDICTED: nucleolin 2-like [Glycine max] 99 8e-19
ref|XP_004960499.1| PREDICTED: protein gar2-like [Setaria italica] 98 1e-18
ref|XP_003566627.1| PREDICTED: uncharacterized protein LOC100837... 97 2e-18
ref|XP_002531981.1| Protein gar2, putative [Ricinus communis] gi... 97 2e-18
ref|XP_006346816.1| PREDICTED: protein gar2-like [Solanum tubero... 96 4e-18
gb|EMT10059.1| RNA-binding protein 34 [Aegilops tauschii] 96 4e-18
dbj|BAJ97810.1| predicted protein [Hordeum vulgare subsp. vulgare] 96 4e-18
gb|EXB65318.1| 28 kDa ribonucleoprotein [Morus notabilis] 96 6e-18
ref|XP_002440476.1| hypothetical protein SORBIDRAFT_09g001570 [S... 96 6e-18
ref|XP_006848692.1| hypothetical protein AMTR_s00178p00033110 [A... 95 1e-17
ref|NP_001240173.1| uncharacterized protein LOC100814693 [Glycin... 95 1e-17
ref|XP_002279438.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 94 1e-17
ref|XP_004240686.1| PREDICTED: protein gar2-like [Solanum lycope... 93 3e-17
ref|XP_004308886.1| PREDICTED: uncharacterized protein LOC101304... 93 4e-17
ref|XP_006378735.1| RNA recognition motif-containing family prot... 92 7e-17
ref|XP_002316306.1| predicted protein [Populus trichocarpa] 92 7e-17
>ref|NP_001054461.1| Os05g0114500 [Oryza sativa Japonica Group]
gi|45680441|gb|AAS75242.1| hypothetical protein [Oryza
sativa Japonica Group] gi|52353509|gb|AAU44075.1|
putative RNA recognition motif (RRM)-containing protein
[Oryza sativa Japonica Group]
gi|113578012|dbj|BAF16375.1| Os05g0114500 [Oryza sativa
Japonica Group] gi|222629967|gb|EEE62099.1| hypothetical
protein OsJ_16883 [Oryza sativa Japonica Group]
Length = 548
Score = 103 bits (258), Expect = 2e-20
Identities = 50/70 (71%), Positives = 59/70 (84%), Gaps = 1/70 (1%)
Frame = -3
Query: 209 DNEKGTAEPNNVEQSEENAK-VYVGGIPYYWSEDDIRTYFEGCGIVTDMDCMTFPESGKF 33
D+ G+ +P E+SE+NAK VYVGGIPYY SEDDIR++FE CG +T +DCMTFPESGKF
Sbjct: 155 DHAVGSDDPVLSEESEKNAKKVYVGGIPYYSSEDDIRSFFEACGSITSVDCMTFPESGKF 214
Query: 32 RGIAILTFKT 3
RGIAILTFKT
Sbjct: 215 RGIAILTFKT 224
>gb|EAY96296.1| hypothetical protein OsI_18195 [Oryza sativa Indica Group]
Length = 548
Score = 103 bits (258), Expect = 2e-20
Identities = 50/70 (71%), Positives = 59/70 (84%), Gaps = 1/70 (1%)
Frame = -3
Query: 209 DNEKGTAEPNNVEQSEENAK-VYVGGIPYYWSEDDIRTYFEGCGIVTDMDCMTFPESGKF 33
D+ G+ +P E+SE+NAK VYVGGIPYY SEDDIR++FE CG +T +DCMTFPESGKF
Sbjct: 155 DHAVGSDDPVLSEESEKNAKKVYVGGIPYYSSEDDIRSFFEACGSITSVDCMTFPESGKF 214
Query: 32 RGIAILTFKT 3
RGIAILTFKT
Sbjct: 215 RGIAILTFKT 224
>ref|XP_006653974.1| PREDICTED: protein gar2-like [Oryza brachyantha]
Length = 549
Score = 100 bits (248), Expect = 3e-19
Identities = 48/70 (68%), Positives = 58/70 (82%), Gaps = 1/70 (1%)
Frame = -3
Query: 209 DNEKGTAEPNNVEQSEENAK-VYVGGIPYYWSEDDIRTYFEGCGIVTDMDCMTFPESGKF 33
D+ + +P ++SEENAK VYVGGIPYY SEDDIR++FE CG +T +DCMTFP+SGKF
Sbjct: 156 DHAVRSDDPFLAQESEENAKKVYVGGIPYYSSEDDIRSFFEACGSITALDCMTFPKSGKF 215
Query: 32 RGIAILTFKT 3
RGIAILTFKT
Sbjct: 216 RGIAILTFKT 225
>gb|ABK24023.1| unknown [Picea sitchensis]
Length = 302
Score = 99.0 bits (245), Expect = 6e-19
Identities = 44/72 (61%), Positives = 59/72 (81%)
Frame = -3
Query: 218 IALDNEKGTAEPNNVEQSEENAKVYVGGIPYYWSEDDIRTYFEGCGIVTDMDCMTFPESG 39
I ++ +GT P + E + + KVYVGGIPYY +EDDIR++FEGCG VT++DCMTFP+SG
Sbjct: 56 IVINANEGTL-PQSQESNYDECKVYVGGIPYYSNEDDIRSFFEGCGTVTEVDCMTFPDSG 114
Query: 38 KFRGIAILTFKT 3
KFRGIA+++FKT
Sbjct: 115 KFRGIALISFKT 126
>ref|XP_003536770.1| PREDICTED: nucleolin 2-like [Glycine max]
Length = 394
Score = 98.6 bits (244), Expect = 8e-19
Identities = 42/64 (65%), Positives = 52/64 (81%)
Frame = -3
Query: 194 TAEPNNVEQSEENAKVYVGGIPYYWSEDDIRTYFEGCGIVTDMDCMTFPESGKFRGIAIL 15
T +N + N K+YVGGIPYY +EDDIR+YFE CG +T++DCMTFPE+GKFRGIAI+
Sbjct: 136 TTSQDNGDAPNTNTKIYVGGIPYYSTEDDIRSYFESCGTITEVDCMTFPETGKFRGIAII 195
Query: 14 TFKT 3
TFKT
Sbjct: 196 TFKT 199
>ref|XP_004960499.1| PREDICTED: protein gar2-like [Setaria italica]
Length = 629
Score = 97.8 bits (242), Expect = 1e-18
Identities = 47/66 (71%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Frame = -3
Query: 197 GTAEPNNVEQSEENAK-VYVGGIPYYWSEDDIRTYFEGCGIVTDMDCMTFPESGKFRGIA 21
G+ P E E++ K VYVGGIPYY SEDDIR++FEGCG +T +DCMTFPESGKFRGIA
Sbjct: 177 GSNNPVVAEHREQSIKKVYVGGIPYYSSEDDIRSFFEGCGSITAIDCMTFPESGKFRGIA 236
Query: 20 ILTFKT 3
ILTFKT
Sbjct: 237 ILTFKT 242
>ref|XP_003566627.1| PREDICTED: uncharacterized protein LOC100837982 [Brachypodium
distachyon]
Length = 620
Score = 97.4 bits (241), Expect = 2e-18
Identities = 47/66 (71%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Frame = -3
Query: 197 GTAEPNNVEQSEENAK-VYVGGIPYYWSEDDIRTYFEGCGIVTDMDCMTFPESGKFRGIA 21
G+ P E E++ K VYVGGIPYY SEDDIR++FEGCG +T +DCMTFPESGKFRGIA
Sbjct: 177 GSDNPIVSEDREQSIKKVYVGGIPYYSSEDDIRSFFEGCGSITALDCMTFPESGKFRGIA 236
Query: 20 ILTFKT 3
ILTFKT
Sbjct: 237 ILTFKT 242
>ref|XP_002531981.1| Protein gar2, putative [Ricinus communis]
gi|223528378|gb|EEF30417.1| Protein gar2, putative
[Ricinus communis]
Length = 436
Score = 97.1 bits (240), Expect = 2e-18
Identities = 47/74 (63%), Positives = 59/74 (79%), Gaps = 5/74 (6%)
Frame = -3
Query: 209 DNEKGTAEPNNV----EQSEENA-KVYVGGIPYYWSEDDIRTYFEGCGIVTDMDCMTFPE 45
D K AE N+ + SE++A KVYVGGIPYY +E+DIR+YFEGCG +T++DCMTFP+
Sbjct: 158 DEAKEVAEETNIISESQISEDSATKVYVGGIPYYSTEEDIRSYFEGCGTITEVDCMTFPD 217
Query: 44 SGKFRGIAILTFKT 3
SGKFRGIAI+ FKT
Sbjct: 218 SGKFRGIAIIGFKT 231
>ref|XP_006346816.1| PREDICTED: protein gar2-like [Solanum tuberosum]
Length = 355
Score = 96.3 bits (238), Expect = 4e-18
Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 4/67 (5%)
Frame = -3
Query: 191 AEPNNVEQSEENA----KVYVGGIPYYWSEDDIRTYFEGCGIVTDMDCMTFPESGKFRGI 24
A + E+ EE+ KVYVGGIPYY +EDDIR+YFEGCG +T++DCM FP+SGKFRGI
Sbjct: 102 AHTSKTEEREESIDISNKVYVGGIPYYSTEDDIRSYFEGCGTITEVDCMNFPDSGKFRGI 161
Query: 23 AILTFKT 3
AI+TFKT
Sbjct: 162 AIITFKT 168
>gb|EMT10059.1| RNA-binding protein 34 [Aegilops tauschii]
Length = 660
Score = 96.3 bits (238), Expect = 4e-18
Identities = 45/61 (73%), Positives = 54/61 (88%)
Frame = -3
Query: 185 PNNVEQSEENAKVYVGGIPYYWSEDDIRTYFEGCGIVTDMDCMTFPESGKFRGIAILTFK 6
P++ EQS + KVYVGGIPYY SEDDIR++FEGCG +T +DCMTFP++GKFRGIAILTFK
Sbjct: 294 PHDSEQSIK--KVYVGGIPYYSSEDDIRSFFEGCGSITALDCMTFPDTGKFRGIAILTFK 351
Query: 5 T 3
T
Sbjct: 352 T 352
>dbj|BAJ97810.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 740
Score = 96.3 bits (238), Expect = 4e-18
Identities = 45/61 (73%), Positives = 53/61 (86%)
Frame = -3
Query: 185 PNNVEQSEENAKVYVGGIPYYWSEDDIRTYFEGCGIVTDMDCMTFPESGKFRGIAILTFK 6
P + EQS + KVYVGGIPYY SEDDIR++FEGCG +T +DCMTFP++GKFRGIAILTFK
Sbjct: 266 PQDSEQSMK--KVYVGGIPYYSSEDDIRSFFEGCGSITALDCMTFPDTGKFRGIAILTFK 323
Query: 5 T 3
T
Sbjct: 324 T 324
>gb|EXB65318.1| 28 kDa ribonucleoprotein [Morus notabilis]
Length = 540
Score = 95.5 bits (236), Expect = 6e-18
Identities = 46/78 (58%), Positives = 57/78 (73%), Gaps = 11/78 (14%)
Frame = -3
Query: 203 EKGTAEPNNVEQSEEN-----------AKVYVGGIPYYWSEDDIRTYFEGCGIVTDMDCM 57
E G E VE +E+N KVYVGGIP+Y +EDDIR+YFEGCG +T++DCM
Sbjct: 133 ELGNEEQMVVEPNEKNDVNSQANGNVTTKVYVGGIPFYSTEDDIRSYFEGCGTITEVDCM 192
Query: 56 TFPESGKFRGIAILTFKT 3
TFPESGKFRGI+I++FKT
Sbjct: 193 TFPESGKFRGISIISFKT 210
>ref|XP_002440476.1| hypothetical protein SORBIDRAFT_09g001570 [Sorghum bicolor]
gi|241945761|gb|EES18906.1| hypothetical protein
SORBIDRAFT_09g001570 [Sorghum bicolor]
Length = 669
Score = 95.5 bits (236), Expect = 6e-18
Identities = 46/62 (74%), Positives = 52/62 (83%), Gaps = 1/62 (1%)
Frame = -3
Query: 185 PNNVEQSEENAK-VYVGGIPYYWSEDDIRTYFEGCGIVTDMDCMTFPESGKFRGIAILTF 9
P EQ E++ K VYVGGIPYY SEDDIR++FE CG +T +DCMTFPESGKFRGIAILTF
Sbjct: 190 PIVAEQREQSIKKVYVGGIPYYSSEDDIRSFFEACGTITVIDCMTFPESGKFRGIAILTF 249
Query: 8 KT 3
KT
Sbjct: 250 KT 251
>ref|XP_006848692.1| hypothetical protein AMTR_s00178p00033110 [Amborella trichopoda]
gi|548852097|gb|ERN10273.1| hypothetical protein
AMTR_s00178p00033110 [Amborella trichopoda]
Length = 420
Score = 94.7 bits (234), Expect = 1e-17
Identities = 43/60 (71%), Positives = 52/60 (86%), Gaps = 4/60 (6%)
Frame = -3
Query: 170 QSEEN----AKVYVGGIPYYWSEDDIRTYFEGCGIVTDMDCMTFPESGKFRGIAILTFKT 3
+S+EN KVYVGGIPYY SEDDIR++FEGCG +T++DCM+FPESGKFRGI I+TFKT
Sbjct: 184 KSQENFGYERKVYVGGIPYYSSEDDIRSFFEGCGTITEVDCMSFPESGKFRGIVIITFKT 243
>ref|NP_001240173.1| uncharacterized protein LOC100814693 [Glycine max]
gi|255644669|gb|ACU22837.1| unknown [Glycine max]
Length = 411
Score = 94.7 bits (234), Expect = 1e-17
Identities = 40/52 (76%), Positives = 47/52 (90%)
Frame = -3
Query: 158 NAKVYVGGIPYYWSEDDIRTYFEGCGIVTDMDCMTFPESGKFRGIAILTFKT 3
N K YVGGIPYY +EDDIR+YFE CG +T++DCMTFPE+GKFRGIAI+TFKT
Sbjct: 165 NTKAYVGGIPYYSTEDDIRSYFESCGTITEVDCMTFPETGKFRGIAIITFKT 216
>ref|XP_002279438.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Vitis vinifera]
gi|296086279|emb|CBI31720.3| unnamed protein product
[Vitis vinifera]
Length = 415
Score = 94.4 bits (233), Expect = 1e-17
Identities = 45/72 (62%), Positives = 55/72 (76%), Gaps = 5/72 (6%)
Frame = -3
Query: 203 EKGTA-EPNNVEQSEENA----KVYVGGIPYYWSEDDIRTYFEGCGIVTDMDCMTFPESG 39
EKG E + S+EN KVYVGGIPYY +EDDIR+YF+ CG +T++DCM FPESG
Sbjct: 161 EKGVVKETAQISDSQENGDASNKVYVGGIPYYSTEDDIRSYFDSCGTITEVDCMMFPESG 220
Query: 38 KFRGIAILTFKT 3
KFRGIAI++FKT
Sbjct: 221 KFRGIAIISFKT 232
>ref|XP_004240686.1| PREDICTED: protein gar2-like [Solanum lycopersicum]
Length = 338
Score = 93.2 bits (230), Expect = 3e-17
Identities = 42/67 (62%), Positives = 53/67 (79%), Gaps = 4/67 (5%)
Frame = -3
Query: 191 AEPNNVEQSEENA----KVYVGGIPYYWSEDDIRTYFEGCGIVTDMDCMTFPESGKFRGI 24
A+ E+ EE+ KVYVGGIPYY ++DDIR+YFEGCG + ++DCM FP+SGKFRGI
Sbjct: 85 AQTTKTEEREESVDISNKVYVGGIPYYSTKDDIRSYFEGCGTIMEVDCMNFPDSGKFRGI 144
Query: 23 AILTFKT 3
AI+TFKT
Sbjct: 145 AIITFKT 151
>ref|XP_004308886.1| PREDICTED: uncharacterized protein LOC101304724 [Fragaria vesca
subsp. vesca]
Length = 677
Score = 92.8 bits (229), Expect = 4e-17
Identities = 42/76 (55%), Positives = 56/76 (73%), Gaps = 4/76 (5%)
Frame = -3
Query: 218 IALDNEKGTAEPNNVEQSEENA----KVYVGGIPYYWSEDDIRTYFEGCGIVTDMDCMTF 51
+ + E+ E + + +ENA KVYVGGIPYY +EDDIR+YFE CG +TD+DCM F
Sbjct: 211 VVVREEQSVDETSKEAERQENAEFATKVYVGGIPYYSTEDDIRSYFESCGSITDIDCMRF 270
Query: 50 PESGKFRGIAILTFKT 3
P++GKF GIAI+TF+T
Sbjct: 271 PDTGKFNGIAIITFRT 286
>ref|XP_006378735.1| RNA recognition motif-containing family protein [Populus
trichocarpa] gi|550330320|gb|ERP56532.1| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 439
Score = 92.0 bits (227), Expect = 7e-17
Identities = 38/50 (76%), Positives = 48/50 (96%)
Frame = -3
Query: 152 KVYVGGIPYYWSEDDIRTYFEGCGIVTDMDCMTFPESGKFRGIAILTFKT 3
+VYVGGIPYY +EDDIR++FEGCG +T++DCMTFP+SGKFRGIAI++FKT
Sbjct: 193 RVYVGGIPYYSTEDDIRSFFEGCGTITEVDCMTFPDSGKFRGIAIISFKT 242
>ref|XP_002316306.1| predicted protein [Populus trichocarpa]
Length = 442
Score = 92.0 bits (227), Expect = 7e-17
Identities = 38/50 (76%), Positives = 48/50 (96%)
Frame = -3
Query: 152 KVYVGGIPYYWSEDDIRTYFEGCGIVTDMDCMTFPESGKFRGIAILTFKT 3
+VYVGGIPYY +EDDIR++FEGCG +T++DCMTFP+SGKFRGIAI++FKT
Sbjct: 196 RVYVGGIPYYSTEDDIRSFFEGCGTITEVDCMTFPDSGKFRGIAIISFKT 245