BLASTX nr result

ID: Zingiber25_contig00024695 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00024695
         (283 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001054461.1| Os05g0114500 [Oryza sativa Japonica Group] g...   100   3e-19
gb|EAY96296.1| hypothetical protein OsI_18195 [Oryza sativa Indi...   100   3e-19
ref|XP_003536770.1| PREDICTED: nucleolin 2-like [Glycine max]          98   1e-18
gb|EXB65318.1| 28 kDa ribonucleoprotein [Morus notabilis]              96   4e-18
ref|XP_006653974.1| PREDICTED: protein gar2-like [Oryza brachyan...    96   5e-18
ref|XP_004960499.1| PREDICTED: protein gar2-like [Setaria italica]     95   8e-18
ref|XP_003566627.1| PREDICTED: uncharacterized protein LOC100837...    95   1e-17
ref|XP_002531981.1| Protein gar2, putative [Ricinus communis] gi...    95   1e-17
ref|XP_002279438.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...    94   1e-17
gb|ABK24023.1| unknown [Picea sitchensis]                              94   1e-17
ref|XP_006346816.1| PREDICTED: protein gar2-like [Solanum tubero...    94   2e-17
ref|NP_001240173.1| uncharacterized protein LOC100814693 [Glycin...    94   2e-17
ref|XP_006848692.1| hypothetical protein AMTR_s00178p00033110 [A...    94   2e-17
gb|EMT10059.1| RNA-binding protein 34 [Aegilops tauschii]              94   2e-17
dbj|BAJ97810.1| predicted protein [Hordeum vulgare subsp. vulgare]     94   2e-17
ref|XP_002440476.1| hypothetical protein SORBIDRAFT_09g001570 [S...    93   4e-17
ref|XP_004308886.1| PREDICTED: uncharacterized protein LOC101304...    91   1e-16
ref|XP_004240686.1| PREDICTED: protein gar2-like [Solanum lycope...    91   2e-16
gb|ESW14711.1| hypothetical protein PHAVU_007G011000g [Phaseolus...    90   3e-16
ref|XP_004497303.1| PREDICTED: protein gar2-like [Cicer arietinum]     90   3e-16

>ref|NP_001054461.1| Os05g0114500 [Oryza sativa Japonica Group]
           gi|45680441|gb|AAS75242.1| hypothetical protein [Oryza
           sativa Japonica Group] gi|52353509|gb|AAU44075.1|
           putative RNA recognition motif (RRM)-containing protein
           [Oryza sativa Japonica Group]
           gi|113578012|dbj|BAF16375.1| Os05g0114500 [Oryza sativa
           Japonica Group] gi|222629967|gb|EEE62099.1| hypothetical
           protein OsJ_16883 [Oryza sativa Japonica Group]
          Length = 548

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 47/70 (67%), Positives = 57/70 (81%), Gaps = 1/70 (1%)
 Frame = +3

Query: 75  DNEKGTAEPNNVEQSEENTK-VYVGGIPYYWSEDDIRTYFDGCGIVTDMDCMTFPESGKF 251
           D+  G+ +P   E+SE+N K VYVGGIPYY SEDDIR++F+ CG +T +DCMTFPESGKF
Sbjct: 155 DHAVGSDDPVLSEESEKNAKKVYVGGIPYYSSEDDIRSFFEACGSITSVDCMTFPESGKF 214

Query: 252 RGITILTFKT 281
           RGI ILTFKT
Sbjct: 215 RGIAILTFKT 224


>gb|EAY96296.1| hypothetical protein OsI_18195 [Oryza sativa Indica Group]
          Length = 548

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 47/70 (67%), Positives = 57/70 (81%), Gaps = 1/70 (1%)
 Frame = +3

Query: 75  DNEKGTAEPNNVEQSEENTK-VYVGGIPYYWSEDDIRTYFDGCGIVTDMDCMTFPESGKF 251
           D+  G+ +P   E+SE+N K VYVGGIPYY SEDDIR++F+ CG +T +DCMTFPESGKF
Sbjct: 155 DHAVGSDDPVLSEESEKNAKKVYVGGIPYYSSEDDIRSFFEACGSITSVDCMTFPESGKF 214

Query: 252 RGITILTFKT 281
           RGI ILTFKT
Sbjct: 215 RGIAILTFKT 224


>ref|XP_003536770.1| PREDICTED: nucleolin 2-like [Glycine max]
          Length = 394

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 41/64 (64%), Positives = 52/64 (81%)
 Frame = +3

Query: 90  TAEPNNVEQSEENTKVYVGGIPYYWSEDDIRTYFDGCGIVTDMDCMTFPESGKFRGITIL 269
           T   +N +    NTK+YVGGIPYY +EDDIR+YF+ CG +T++DCMTFPE+GKFRGI I+
Sbjct: 136 TTSQDNGDAPNTNTKIYVGGIPYYSTEDDIRSYFESCGTITEVDCMTFPETGKFRGIAII 195

Query: 270 TFKT 281
           TFKT
Sbjct: 196 TFKT 199


>gb|EXB65318.1| 28 kDa ribonucleoprotein [Morus notabilis]
          Length = 540

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 46/78 (58%), Positives = 58/78 (74%), Gaps = 11/78 (14%)
 Frame = +3

Query: 81  EKGTAEPNNVEQSEEN-----------TKVYVGGIPYYWSEDDIRTYFDGCGIVTDMDCM 227
           E G  E   VE +E+N           TKVYVGGIP+Y +EDDIR+YF+GCG +T++DCM
Sbjct: 133 ELGNEEQMVVEPNEKNDVNSQANGNVTTKVYVGGIPFYSTEDDIRSYFEGCGTITEVDCM 192

Query: 228 TFPESGKFRGITILTFKT 281
           TFPESGKFRGI+I++FKT
Sbjct: 193 TFPESGKFRGISIISFKT 210


>ref|XP_006653974.1| PREDICTED: protein gar2-like [Oryza brachyantha]
          Length = 549

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 45/70 (64%), Positives = 56/70 (80%), Gaps = 1/70 (1%)
 Frame = +3

Query: 75  DNEKGTAEPNNVEQSEENTK-VYVGGIPYYWSEDDIRTYFDGCGIVTDMDCMTFPESGKF 251
           D+   + +P   ++SEEN K VYVGGIPYY SEDDIR++F+ CG +T +DCMTFP+SGKF
Sbjct: 156 DHAVRSDDPFLAQESEENAKKVYVGGIPYYSSEDDIRSFFEACGSITALDCMTFPKSGKF 215

Query: 252 RGITILTFKT 281
           RGI ILTFKT
Sbjct: 216 RGIAILTFKT 225


>ref|XP_004960499.1| PREDICTED: protein gar2-like [Setaria italica]
          Length = 629

 Score = 95.1 bits (235), Expect = 8e-18
 Identities = 45/66 (68%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
 Frame = +3

Query: 87  GTAEPNNVEQSEENTK-VYVGGIPYYWSEDDIRTYFDGCGIVTDMDCMTFPESGKFRGIT 263
           G+  P   E  E++ K VYVGGIPYY SEDDIR++F+GCG +T +DCMTFPESGKFRGI 
Sbjct: 177 GSNNPVVAEHREQSIKKVYVGGIPYYSSEDDIRSFFEGCGSITAIDCMTFPESGKFRGIA 236

Query: 264 ILTFKT 281
           ILTFKT
Sbjct: 237 ILTFKT 242


>ref|XP_003566627.1| PREDICTED: uncharacterized protein LOC100837982 [Brachypodium
           distachyon]
          Length = 620

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 45/66 (68%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
 Frame = +3

Query: 87  GTAEPNNVEQSEENTK-VYVGGIPYYWSEDDIRTYFDGCGIVTDMDCMTFPESGKFRGIT 263
           G+  P   E  E++ K VYVGGIPYY SEDDIR++F+GCG +T +DCMTFPESGKFRGI 
Sbjct: 177 GSDNPIVSEDREQSIKKVYVGGIPYYSSEDDIRSFFEGCGSITALDCMTFPESGKFRGIA 236

Query: 264 ILTFKT 281
           ILTFKT
Sbjct: 237 ILTFKT 242


>ref|XP_002531981.1| Protein gar2, putative [Ricinus communis]
           gi|223528378|gb|EEF30417.1| Protein gar2, putative
           [Ricinus communis]
          Length = 436

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 45/74 (60%), Positives = 58/74 (78%), Gaps = 5/74 (6%)
 Frame = +3

Query: 75  DNEKGTAEPNNV----EQSEEN-TKVYVGGIPYYWSEDDIRTYFDGCGIVTDMDCMTFPE 239
           D  K  AE  N+    + SE++ TKVYVGGIPYY +E+DIR+YF+GCG +T++DCMTFP+
Sbjct: 158 DEAKEVAEETNIISESQISEDSATKVYVGGIPYYSTEEDIRSYFEGCGTITEVDCMTFPD 217

Query: 240 SGKFRGITILTFKT 281
           SGKFRGI I+ FKT
Sbjct: 218 SGKFRGIAIIGFKT 231


>ref|XP_002279438.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Vitis vinifera]
           gi|296086279|emb|CBI31720.3| unnamed protein product
           [Vitis vinifera]
          Length = 415

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 45/72 (62%), Positives = 54/72 (75%), Gaps = 5/72 (6%)
 Frame = +3

Query: 81  EKGTA-EPNNVEQSEEN----TKVYVGGIPYYWSEDDIRTYFDGCGIVTDMDCMTFPESG 245
           EKG   E   +  S+EN     KVYVGGIPYY +EDDIR+YFD CG +T++DCM FPESG
Sbjct: 161 EKGVVKETAQISDSQENGDASNKVYVGGIPYYSTEDDIRSYFDSCGTITEVDCMMFPESG 220

Query: 246 KFRGITILTFKT 281
           KFRGI I++FKT
Sbjct: 221 KFRGIAIISFKT 232


>gb|ABK24023.1| unknown [Picea sitchensis]
          Length = 302

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 39/61 (63%), Positives = 52/61 (85%)
 Frame = +3

Query: 99  PNNVEQSEENTKVYVGGIPYYWSEDDIRTYFDGCGIVTDMDCMTFPESGKFRGITILTFK 278
           P + E + +  KVYVGGIPYY +EDDIR++F+GCG VT++DCMTFP+SGKFRGI +++FK
Sbjct: 66  PQSQESNYDECKVYVGGIPYYSNEDDIRSFFEGCGTVTEVDCMTFPDSGKFRGIALISFK 125

Query: 279 T 281
           T
Sbjct: 126 T 126


>ref|XP_006346816.1| PREDICTED: protein gar2-like [Solanum tuberosum]
          Length = 355

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 42/67 (62%), Positives = 53/67 (79%), Gaps = 4/67 (5%)
 Frame = +3

Query: 93  AEPNNVEQSEEN----TKVYVGGIPYYWSEDDIRTYFDGCGIVTDMDCMTFPESGKFRGI 260
           A  +  E+ EE+     KVYVGGIPYY +EDDIR+YF+GCG +T++DCM FP+SGKFRGI
Sbjct: 102 AHTSKTEEREESIDISNKVYVGGIPYYSTEDDIRSYFEGCGTITEVDCMNFPDSGKFRGI 161

Query: 261 TILTFKT 281
            I+TFKT
Sbjct: 162 AIITFKT 168


>ref|NP_001240173.1| uncharacterized protein LOC100814693 [Glycine max]
           gi|255644669|gb|ACU22837.1| unknown [Glycine max]
          Length = 411

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 39/52 (75%), Positives = 47/52 (90%)
 Frame = +3

Query: 126 NTKVYVGGIPYYWSEDDIRTYFDGCGIVTDMDCMTFPESGKFRGITILTFKT 281
           NTK YVGGIPYY +EDDIR+YF+ CG +T++DCMTFPE+GKFRGI I+TFKT
Sbjct: 165 NTKAYVGGIPYYSTEDDIRSYFESCGTITEVDCMTFPETGKFRGIAIITFKT 216


>ref|XP_006848692.1| hypothetical protein AMTR_s00178p00033110 [Amborella trichopoda]
           gi|548852097|gb|ERN10273.1| hypothetical protein
           AMTR_s00178p00033110 [Amborella trichopoda]
          Length = 420

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 42/60 (70%), Positives = 52/60 (86%), Gaps = 4/60 (6%)
 Frame = +3

Query: 114 QSEEN----TKVYVGGIPYYWSEDDIRTYFDGCGIVTDMDCMTFPESGKFRGITILTFKT 281
           +S+EN     KVYVGGIPYY SEDDIR++F+GCG +T++DCM+FPESGKFRGI I+TFKT
Sbjct: 184 KSQENFGYERKVYVGGIPYYSSEDDIRSFFEGCGTITEVDCMSFPESGKFRGIVIITFKT 243


>gb|EMT10059.1| RNA-binding protein 34 [Aegilops tauschii]
          Length = 660

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 43/61 (70%), Positives = 53/61 (86%)
 Frame = +3

Query: 99  PNNVEQSEENTKVYVGGIPYYWSEDDIRTYFDGCGIVTDMDCMTFPESGKFRGITILTFK 278
           P++ EQS +  KVYVGGIPYY SEDDIR++F+GCG +T +DCMTFP++GKFRGI ILTFK
Sbjct: 294 PHDSEQSIK--KVYVGGIPYYSSEDDIRSFFEGCGSITALDCMTFPDTGKFRGIAILTFK 351

Query: 279 T 281
           T
Sbjct: 352 T 352


>dbj|BAJ97810.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 740

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 43/61 (70%), Positives = 52/61 (85%)
 Frame = +3

Query: 99  PNNVEQSEENTKVYVGGIPYYWSEDDIRTYFDGCGIVTDMDCMTFPESGKFRGITILTFK 278
           P + EQS +  KVYVGGIPYY SEDDIR++F+GCG +T +DCMTFP++GKFRGI ILTFK
Sbjct: 266 PQDSEQSMK--KVYVGGIPYYSSEDDIRSFFEGCGSITALDCMTFPDTGKFRGIAILTFK 323

Query: 279 T 281
           T
Sbjct: 324 T 324


>ref|XP_002440476.1| hypothetical protein SORBIDRAFT_09g001570 [Sorghum bicolor]
           gi|241945761|gb|EES18906.1| hypothetical protein
           SORBIDRAFT_09g001570 [Sorghum bicolor]
          Length = 669

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 44/62 (70%), Positives = 51/62 (82%), Gaps = 1/62 (1%)
 Frame = +3

Query: 99  PNNVEQSEENTK-VYVGGIPYYWSEDDIRTYFDGCGIVTDMDCMTFPESGKFRGITILTF 275
           P   EQ E++ K VYVGGIPYY SEDDIR++F+ CG +T +DCMTFPESGKFRGI ILTF
Sbjct: 190 PIVAEQREQSIKKVYVGGIPYYSSEDDIRSFFEACGTITVIDCMTFPESGKFRGIAILTF 249

Query: 276 KT 281
           KT
Sbjct: 250 KT 251


>ref|XP_004308886.1| PREDICTED: uncharacterized protein LOC101304724 [Fragaria vesca
           subsp. vesca]
          Length = 677

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 39/67 (58%), Positives = 52/67 (77%)
 Frame = +3

Query: 81  EKGTAEPNNVEQSEENTKVYVGGIPYYWSEDDIRTYFDGCGIVTDMDCMTFPESGKFRGI 260
           ++ + E    E +E  TKVYVGGIPYY +EDDIR+YF+ CG +TD+DCM FP++GKF GI
Sbjct: 220 DETSKEAERQENAEFATKVYVGGIPYYSTEDDIRSYFESCGSITDIDCMRFPDTGKFNGI 279

Query: 261 TILTFKT 281
            I+TF+T
Sbjct: 280 AIITFRT 286


>ref|XP_004240686.1| PREDICTED: protein gar2-like [Solanum lycopersicum]
          Length = 338

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 40/67 (59%), Positives = 52/67 (77%), Gaps = 4/67 (5%)
 Frame = +3

Query: 93  AEPNNVEQSEENT----KVYVGGIPYYWSEDDIRTYFDGCGIVTDMDCMTFPESGKFRGI 260
           A+    E+ EE+     KVYVGGIPYY ++DDIR+YF+GCG + ++DCM FP+SGKFRGI
Sbjct: 85  AQTTKTEEREESVDISNKVYVGGIPYYSTKDDIRSYFEGCGTIMEVDCMNFPDSGKFRGI 144

Query: 261 TILTFKT 281
            I+TFKT
Sbjct: 145 AIITFKT 151


>gb|ESW14711.1| hypothetical protein PHAVU_007G011000g [Phaseolus vulgaris]
          Length = 405

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 40/63 (63%), Positives = 51/63 (80%), Gaps = 4/63 (6%)
 Frame = +3

Query: 105 NVEQSEEN----TKVYVGGIPYYWSEDDIRTYFDGCGIVTDMDCMTFPESGKFRGITILT 272
           N   S++N    TKVYVGGIPYY +EDDIR+YF+ CG +T++DCM FPE+GKFRGI I++
Sbjct: 147 NTTTSQDNVDVPTKVYVGGIPYYSTEDDIRSYFESCGTITEVDCMYFPETGKFRGIAIIS 206

Query: 273 FKT 281
           FKT
Sbjct: 207 FKT 209


>ref|XP_004497303.1| PREDICTED: protein gar2-like [Cicer arietinum]
          Length = 460

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 37/57 (64%), Positives = 49/57 (85%)
 Frame = +3

Query: 111 EQSEENTKVYVGGIPYYWSEDDIRTYFDGCGIVTDMDCMTFPESGKFRGITILTFKT 281
           E  +  TKVYVGGIPYY +EDDI++YF+GCG +TD+ CMTFP++GKF+GI I++FKT
Sbjct: 195 ENGDVATKVYVGGIPYYSTEDDIQSYFEGCGTITDIHCMTFPDTGKFKGIAIISFKT 251


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