BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00024688
         (466 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006649858.1| PREDICTED: glycine-rich RNA-binding protein ...   116   4e-24
ref|XP_003575643.1| PREDICTED: glycine-rich RNA-binding protein ...   114   1e-23
ref|NP_001169115.1| uncharacterized protein LOC100382959 [Zea ma...   110   1e-22
ref|XP_004159670.1| PREDICTED: cold-inducible RNA-binding protei...   110   2e-22
ref|XP_002461004.1| hypothetical protein SORBIDRAFT_02g039025 [S...   110   3e-22
ref|XP_002284323.1| PREDICTED: cold-inducible RNA-binding protei...   109   4e-22
ref|XP_004981486.1| PREDICTED: glycine-rich RNA-binding protein ...   108   6e-22
ref|XP_006292104.1| hypothetical protein CARUB_v10018300mg [Caps...   108   6e-22
ref|XP_004135289.1| PREDICTED: cold-inducible RNA-binding protei...   108   1e-21
ref|XP_002877450.1| hypothetical protein ARALYDRAFT_905782 [Arab...   107   2e-21
ref|NP_190188.1| RNA recognition motif-containing protein [Arabi...   106   3e-21
ref|XP_006848599.1| hypothetical protein AMTR_s00168p00066520 [A...   105   5e-21
gb|EXC35053.1| Cold-inducible RNA-binding protein [Morus notabilis]   105   6e-21
ref|XP_002533105.1| cold-inducible RNA binding protein, putative...   102   4e-20
ref|XP_006279867.1| hypothetical protein CARUB_v10028559mg [Caps...   101   9e-20
ref|XP_003597341.1| Cold-inducible RNA-binding protein [Medicago...   100   2e-19
ref|XP_006363377.1| PREDICTED: cold-inducible RNA-binding protei...   100   3e-19
ref|XP_002864655.1| predicted protein [Arabidopsis lyrata subsp....    99   4e-19
ref|XP_004294595.1| PREDICTED: polyadenylate-binding protein, cy...    99   6e-19
ref|XP_006424765.1| hypothetical protein CICLE_v10029673mg [Citr...    98   1e-18

>ref|XP_006649858.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
           [Oryza brachyantha]
          Length = 105

 Score =  116 bits (290), Expect = 4e-24
 Identities = 52/86 (60%), Positives = 73/86 (84%)
 Frame = -3

Query: 461 REYSSKIFISRLSFYTTDDELRNTFSQFGQIKEARLIKDPRTNRPKGYGFVEYSTDAEAE 282
           + +S++IF+SRLSFYTT++EL+N F+ FG ++EARL++D +T RPKG+GFV+YS+ AEAE
Sbjct: 19  KSFSTEIFVSRLSFYTTEEELKNIFTPFGAVEEARLVRDNQTGRPKGFGFVKYSSQAEAE 78

Query: 281 KAIKSMDGKIYGGRLIFVEHAKSEST 204
           KA+K+MDG+I  GRLIFVE AK   +
Sbjct: 79  KAVKAMDGRILRGRLIFVEIAKERKS 104


>ref|XP_003575643.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Brachypodium distachyon]
          Length = 108

 Score =  114 bits (286), Expect = 1e-23
 Identities = 52/85 (61%), Positives = 71/85 (83%)
 Frame = -3

Query: 455 YSSKIFISRLSFYTTDDELRNTFSQFGQIKEARLIKDPRTNRPKGYGFVEYSTDAEAEKA 276
           +S++IF+S+LSFYTT++EL+N FS FG I+EARL++D +T RPKG+GFV+YS+   AEKA
Sbjct: 24  FSTEIFVSKLSFYTTEEELKNIFSPFGAIEEARLMRDNQTGRPKGFGFVKYSSQVAAEKA 83

Query: 275 IKSMDGKIYGGRLIFVEHAKSESTG 201
           +K+MDG+I  GR+IFVE AK   TG
Sbjct: 84  VKAMDGRIIRGRIIFVETAKERDTG 108


>ref|NP_001169115.1| uncharacterized protein LOC100382959 [Zea mays]
           gi|223975005|gb|ACN31690.1| unknown [Zea mays]
           gi|414887554|tpg|DAA63568.1| TPA: hypothetical protein
           ZEAMMB73_633512 [Zea mays]
          Length = 103

 Score =  110 bits (276), Expect = 1e-22
 Identities = 52/86 (60%), Positives = 71/86 (82%)
 Frame = -3

Query: 461 REYSSKIFISRLSFYTTDDELRNTFSQFGQIKEARLIKDPRTNRPKGYGFVEYSTDAEAE 282
           R +S++IF+SRLSFYTT++E ++ FS FG ++EARL++D +T R KG+GFV+YS+ AEAE
Sbjct: 17  RCFSTEIFVSRLSFYTTEEEFKDIFSPFGTVEEARLMRDHQTGRMKGFGFVKYSSQAEAE 76

Query: 281 KAIKSMDGKIYGGRLIFVEHAKSEST 204
           KA+K+MDGKI  GRLIFVE AK   +
Sbjct: 77  KAVKAMDGKILRGRLIFVEMAKGHES 102


>ref|XP_004159670.1| PREDICTED: cold-inducible RNA-binding protein B-like [Cucumis
           sativus]
          Length = 95

 Score =  110 bits (275), Expect = 2e-22
 Identities = 53/83 (63%), Positives = 67/83 (80%)
 Frame = -3

Query: 449 SKIFISRLSFYTTDDELRNTFSQFGQIKEARLIKDPRTNRPKGYGFVEYSTDAEAEKAIK 270
           S++FISRLS YTT + L+N FS FG I EARLI+DP+T RPKG+GFV + + AEA+KA+K
Sbjct: 7   SELFISRLSSYTTLERLKNLFSPFGSISEARLIRDPKTERPKGFGFVTFQSPAEAKKALK 66

Query: 269 SMDGKIYGGRLIFVEHAKSESTG 201
           +MDG+I  GRLIFVE AK+E  G
Sbjct: 67  AMDGRIVDGRLIFVEFAKTEKHG 89


>ref|XP_002461004.1| hypothetical protein SORBIDRAFT_02g039025 [Sorghum bicolor]
           gi|241924381|gb|EER97525.1| hypothetical protein
           SORBIDRAFT_02g039025 [Sorghum bicolor]
          Length = 83

 Score =  110 bits (274), Expect = 3e-22
 Identities = 51/82 (62%), Positives = 70/82 (85%)
 Frame = -3

Query: 461 REYSSKIFISRLSFYTTDDELRNTFSQFGQIKEARLIKDPRTNRPKGYGFVEYSTDAEAE 282
           R +S++IF+SRLSFYTT++E ++ FS FG ++EARL++D +T R KG+GFV+YS+ AEAE
Sbjct: 2   RCFSTEIFVSRLSFYTTEEEFKDVFSSFGTVEEARLMRDQQTGRIKGFGFVKYSSQAEAE 61

Query: 281 KAIKSMDGKIYGGRLIFVEHAK 216
           KA+K+MDG+I  GRLIFVE AK
Sbjct: 62  KAVKAMDGRILRGRLIFVEMAK 83


>ref|XP_002284323.1| PREDICTED: cold-inducible RNA-binding protein [Vitis vinifera]
           gi|297746123|emb|CBI16179.3| unnamed protein product
           [Vitis vinifera]
          Length = 112

 Score =  109 bits (272), Expect = 4e-22
 Identities = 51/88 (57%), Positives = 71/88 (80%)
 Frame = -3

Query: 461 REYSSKIFISRLSFYTTDDELRNTFSQFGQIKEARLIKDPRTNRPKGYGFVEYSTDAEAE 282
           R +SS+IF++RLS YTT++EL   FS FG + +ARLIKDP+T RPKG+GFV++ ++ +AE
Sbjct: 21  RRFSSEIFVTRLSGYTTNEELIEMFSPFGVVTQARLIKDPKTQRPKGFGFVKFESEVDAE 80

Query: 281 KAIKSMDGKIYGGRLIFVEHAKSESTGE 198
           KA+K+M+G+I  GRLIFVE AK+   GE
Sbjct: 81  KALKAMNGRIVRGRLIFVEIAKTTRPGE 108


>ref|XP_004981486.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
           isoform X1 [Setaria italica]
           gi|514813407|ref|XP_004981487.1| PREDICTED: glycine-rich
           RNA-binding protein 4, mitochondrial-like isoform X2
           [Setaria italica]
          Length = 104

 Score =  108 bits (271), Expect = 6e-22
 Identities = 51/86 (59%), Positives = 70/86 (81%)
 Frame = -3

Query: 461 REYSSKIFISRLSFYTTDDELRNTFSQFGQIKEARLIKDPRTNRPKGYGFVEYSTDAEAE 282
           R +S++IF+SRLSFYTT++EL++ FS FG +KEARL++D +T R KG+GFV YS+ AEAE
Sbjct: 19  RCFSTEIFVSRLSFYTTEEELKDVFSPFGNVKEARLMRDSQTGRLKGFGFVNYSSQAEAE 78

Query: 281 KAIKSMDGKIYGGRLIFVEHAKSEST 204
           KA+K+M G+I  GRLIFVE A+   +
Sbjct: 79  KAVKAMHGRILRGRLIFVEMAQGRKS 104


>ref|XP_006292104.1| hypothetical protein CARUB_v10018300mg [Capsella rubella]
           gi|482560811|gb|EOA25002.1| hypothetical protein
           CARUB_v10018300mg [Capsella rubella]
          Length = 100

 Score =  108 bits (271), Expect = 6e-22
 Identities = 51/83 (61%), Positives = 66/83 (79%)
 Frame = -3

Query: 461 REYSSKIFISRLSFYTTDDELRNTFSQFGQIKEARLIKDPRTNRPKGYGFVEYSTDAEAE 282
           +  S+++F+SRLS Y TD  LR  FSQFGQIKEARLI+D +T RPKG+GF+ Y ++ +A 
Sbjct: 3   KRVSAQLFVSRLSAYATDQSLRQLFSQFGQIKEARLIRDSKTQRPKGFGFITYESEDDAR 62

Query: 281 KAIKSMDGKIYGGRLIFVEHAKS 213
           KA+KS+DGKI  GRLIFVE AK+
Sbjct: 63  KAMKSLDGKIVDGRLIFVEVAKN 85


>ref|XP_004135289.1| PREDICTED: cold-inducible RNA-binding protein B-like isoform 1
           [Cucumis sativus] gi|449435013|ref|XP_004135290.1|
           PREDICTED: cold-inducible RNA-binding protein B-like
           isoform 2 [Cucumis sativus]
          Length = 89

 Score =  108 bits (269), Expect = 1e-21
 Identities = 52/83 (62%), Positives = 66/83 (79%)
 Frame = -3

Query: 449 SKIFISRLSFYTTDDELRNTFSQFGQIKEARLIKDPRTNRPKGYGFVEYSTDAEAEKAIK 270
           S++FISRLS YTT + L+N FS FG I EARLI+DP+T RPKG+GFV + + AEA+KA+K
Sbjct: 7   SELFISRLSSYTTLERLKNLFSPFGSISEARLIRDPKTERPKGFGFVTFQSPAEAKKALK 66

Query: 269 SMDGKIYGGRLIFVEHAKSESTG 201
           +MDG+I  GRLIFVE AK+   G
Sbjct: 67  AMDGRIVDGRLIFVEFAKTGDMG 89


>ref|XP_002877450.1| hypothetical protein ARALYDRAFT_905782 [Arabidopsis lyrata subsp.
           lyrata] gi|297323288|gb|EFH53709.1| hypothetical protein
           ARALYDRAFT_905782 [Arabidopsis lyrata subsp. lyrata]
          Length = 102

 Score =  107 bits (267), Expect = 2e-21
 Identities = 51/83 (61%), Positives = 65/83 (78%)
 Frame = -3

Query: 461 REYSSKIFISRLSFYTTDDELRNTFSQFGQIKEARLIKDPRTNRPKGYGFVEYSTDAEAE 282
           +  S+++F+SRLS YTTD  LR  FS FGQIKEARLI+D  T RPKG+GF+ + ++ +A 
Sbjct: 3   KRISAQLFVSRLSAYTTDQSLRQLFSPFGQIKEARLIRDSETQRPKGFGFITFESEDDAR 62

Query: 281 KAIKSMDGKIYGGRLIFVEHAKS 213
           KA+KS+DGKI  GRLIFVE AKS
Sbjct: 63  KALKSLDGKIVEGRLIFVEVAKS 85


>ref|NP_190188.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
           gi|7630030|emb|CAB88326.1| RNA binding protein-like
           [Arabidopsis thaliana] gi|46931202|gb|AAT06405.1|
           At3g46020 [Arabidopsis thaliana]
           gi|50253530|gb|AAT71967.1| At3g46020 [Arabidopsis
           thaliana] gi|332644581|gb|AEE78102.1| RNA recognition
           motif-containing protein [Arabidopsis thaliana]
          Length = 102

 Score =  106 bits (265), Expect = 3e-21
 Identities = 50/83 (60%), Positives = 65/83 (78%)
 Frame = -3

Query: 461 REYSSKIFISRLSFYTTDDELRNTFSQFGQIKEARLIKDPRTNRPKGYGFVEYSTDAEAE 282
           +  S+++F+SRLS YTTD  LR  FS FGQIKEARLI+D  T RPKG+GF+ + ++ +A 
Sbjct: 3   KRISAQLFVSRLSAYTTDQSLRQLFSPFGQIKEARLIRDSETQRPKGFGFITFDSEDDAR 62

Query: 281 KAIKSMDGKIYGGRLIFVEHAKS 213
           KA+KS+DGKI  GRLIFVE AK+
Sbjct: 63  KALKSLDGKIVDGRLIFVEVAKN 85


>ref|XP_006848599.1| hypothetical protein AMTR_s00168p00066520 [Amborella trichopoda]
           gi|548851921|gb|ERN10180.1| hypothetical protein
           AMTR_s00168p00066520 [Amborella trichopoda]
          Length = 125

 Score =  105 bits (263), Expect = 5e-21
 Identities = 48/82 (58%), Positives = 66/82 (80%)
 Frame = -3

Query: 461 REYSSKIFISRLSFYTTDDELRNTFSQFGQIKEARLIKDPRTNRPKGYGFVEYSTDAEAE 282
           R +SS++F+SRLSFY+T+  L++ FS FG++ EARL+ D  T RPKGYGF+ Y ++ EA+
Sbjct: 28  RGFSSELFVSRLSFYSTEQSLKDAFSPFGEVIEARLVIDKATLRPKGYGFIRYQSEIEAQ 87

Query: 281 KAIKSMDGKIYGGRLIFVEHAK 216
           KA+K+MDG+  GGRLIFVE AK
Sbjct: 88  KAMKAMDGRFLGGRLIFVEVAK 109


>gb|EXC35053.1| Cold-inducible RNA-binding protein [Morus notabilis]
          Length = 94

 Score =  105 bits (262), Expect = 6e-21
 Identities = 48/88 (54%), Positives = 68/88 (77%)
 Frame = -3

Query: 461 REYSSKIFISRLSFYTTDDELRNTFSQFGQIKEARLIKDPRTNRPKGYGFVEYSTDAEAE 282
           +  SS++F+SRLS YTT++ L+  FS FG++ EARL+ D +T RPKG+GFV Y ++ EA+
Sbjct: 3   KRLSSQLFVSRLSSYTTNEHLKKLFSPFGEVLEARLVLDSKTQRPKGFGFVTYESEVEAQ 62

Query: 281 KAIKSMDGKIYGGRLIFVEHAKSESTGE 198
           KA+K+M+G+I  GRLIFVE AK+   GE
Sbjct: 63  KALKAMNGRIVDGRLIFVEVAKTSKPGE 90


>ref|XP_002533105.1| cold-inducible RNA binding protein, putative [Ricinus communis]
           gi|223527096|gb|EEF29277.1| cold-inducible RNA binding
           protein, putative [Ricinus communis]
          Length = 94

 Score =  102 bits (255), Expect = 4e-20
 Identities = 46/84 (54%), Positives = 68/84 (80%)
 Frame = -3

Query: 449 SKIFISRLSFYTTDDELRNTFSQFGQIKEARLIKDPRTNRPKGYGFVEYSTDAEAEKAIK 270
           S++F+ RLS YTT+ +L   FS FG +KEARL+ DPRT +PKG+GFV + ++++A+KA+K
Sbjct: 7   SQLFVGRLSCYTTNQKLEKLFSPFGIVKEARLVLDPRTQKPKGFGFVTFDSESQAQKALK 66

Query: 269 SMDGKIYGGRLIFVEHAKSESTGE 198
           +M+G+I  GRL+FVE AKS ++GE
Sbjct: 67  AMNGRIVDGRLLFVEVAKSINSGE 90


>ref|XP_006279867.1| hypothetical protein CARUB_v10028559mg [Capsella rubella]
           gi|482548571|gb|EOA12765.1| hypothetical protein
           CARUB_v10028559mg [Capsella rubella]
          Length = 98

 Score =  101 bits (252), Expect = 9e-20
 Identities = 46/82 (56%), Positives = 65/82 (79%)
 Frame = -3

Query: 461 REYSSKIFISRLSFYTTDDELRNTFSQFGQIKEARLIKDPRTNRPKGYGFVEYSTDAEAE 282
           + Y++++F+SRLS YTT+  LR  FS FGQI EARLIKD +T RPKG+GF+ + ++ +A+
Sbjct: 3   KRYTAQLFVSRLSAYTTEQSLRQLFSPFGQITEARLIKDQQTQRPKGFGFITFKSENDAQ 62

Query: 281 KAIKSMDGKIYGGRLIFVEHAK 216
           KA+K+++GKI   RLIFVE AK
Sbjct: 63  KALKALNGKIVDSRLIFVEAAK 84


>ref|XP_003597341.1| Cold-inducible RNA-binding protein [Medicago truncatula]
           gi|355486389|gb|AES67592.1| Cold-inducible RNA-binding
           protein [Medicago truncatula]
           gi|388509994|gb|AFK43063.1| unknown [Medicago
           truncatula]
          Length = 89

 Score =  100 bits (250), Expect = 2e-19
 Identities = 47/82 (57%), Positives = 62/82 (75%)
 Frame = -3

Query: 449 SKIFISRLSFYTTDDELRNTFSQFGQIKEARLIKDPRTNRPKGYGFVEYSTDAEAEKAIK 270
           +K+F+SRLSFYTT  +L + FS FG + EA LI D  T RPKG+GFV Y ++ EAEKA K
Sbjct: 7   TKLFVSRLSFYTTQQQLESLFSPFGVLTEATLITDQNTQRPKGFGFVSYKSEIEAEKARK 66

Query: 269 SMDGKIYGGRLIFVEHAKSEST 204
           +++G+I  GRLIFVEHAK + +
Sbjct: 67  ALNGRIVDGRLIFVEHAKPKDS 88


>ref|XP_006363377.1| PREDICTED: cold-inducible RNA-binding protein-like [Solanum
           tuberosum]
          Length = 125

 Score =  100 bits (248), Expect = 3e-19
 Identities = 44/83 (53%), Positives = 65/83 (78%)
 Frame = -3

Query: 446 KIFISRLSFYTTDDELRNTFSQFGQIKEARLIKDPRTNRPKGYGFVEYSTDAEAEKAIKS 267
           ++F++RLSFYTT ++L+  FS FG + EARL+KDPRT RPKG+GFV + ++A+A+ A+ S
Sbjct: 37  QLFVNRLSFYTTSEQLKKLFSPFGVVTEARLVKDPRTQRPKGFGFVTFESEADAQNALNS 96

Query: 266 MDGKIYGGRLIFVEHAKSESTGE 198
           ++G+I  GRLIFVE A++    E
Sbjct: 97  LNGRIVDGRLIFVEVAETTEAVE 119


>ref|XP_002864655.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297310490|gb|EFH40914.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 95

 Score = 99.4 bits (246), Expect = 4e-19
 Identities = 44/82 (53%), Positives = 65/82 (79%)
 Frame = -3

Query: 461 REYSSKIFISRLSFYTTDDELRNTFSQFGQIKEARLIKDPRTNRPKGYGFVEYSTDAEAE 282
           + +++++F+SRLS YTTD  LR  F+ FGQI EARLI+D +T RPKG+GF+ + ++ +A+
Sbjct: 3   KRFTTQLFVSRLSAYTTDQSLRQLFAPFGQIIEARLIRDQQTQRPKGFGFITFESEDDAQ 62

Query: 281 KAIKSMDGKIYGGRLIFVEHAK 216
            A+K+++GKI  GRLIFVE AK
Sbjct: 63  NALKALNGKIVNGRLIFVEAAK 84


>ref|XP_004294595.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
           nuclear-like isoform 2 [Fragaria vesca subsp. vesca]
          Length = 91

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 46/86 (53%), Positives = 62/86 (72%)
 Frame = -3

Query: 461 REYSSKIFISRLSFYTTDDELRNTFSQFGQIKEARLIKDPRTNRPKGYGFVEYSTDAEAE 282
           +   S +F+SRLS +T+ ++LR  FS FG + EARL+ DP T RPKG+GFV Y ++ EA+
Sbjct: 3   KRLGSTLFVSRLSSFTSKEKLRQMFSPFGDVTEARLVIDPNTQRPKGFGFVTYKSEVEAQ 62

Query: 281 KAIKSMDGKIYGGRLIFVEHAKSEST 204
           KAIK MDG++  GRL+FVE A  E T
Sbjct: 63  KAIKVMDGRMVDGRLLFVEVAHPEDT 88


>ref|XP_006424765.1| hypothetical protein CICLE_v10029673mg [Citrus clementina]
           gi|568870147|ref|XP_006488271.1| PREDICTED: glycine-rich
           RNA-binding protein 4, mitochondrial-like [Citrus
           sinensis] gi|557526699|gb|ESR38005.1| hypothetical
           protein CICLE_v10029673mg [Citrus clementina]
          Length = 94

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 44/83 (53%), Positives = 64/83 (77%)
 Frame = -3

Query: 449 SKIFISRLSFYTTDDELRNTFSQFGQIKEARLIKDPRTNRPKGYGFVEYSTDAEAEKAIK 270
           +++F+SRLS Y T  E +  FS+FG + +A+LI DP+T RPKG+GF+ + ++ +A+KA+K
Sbjct: 7   AQLFVSRLSSYITTKEFKALFSRFGVVTDAKLITDPKTQRPKGFGFITFQSEDDAQKALK 66

Query: 269 SMDGKIYGGRLIFVEHAKSESTG 201
           +MDG+I  GRLIFVE AKS S G
Sbjct: 67  TMDGRIVNGRLIFVEVAKSRSPG 89