BLASTX nr result
ID: Zingiber25_contig00024608
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00024608
(742 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004486031.1| PREDICTED: la-related protein 7-like [Cicer ... 77 1e-18
ref|XP_003542932.1| PREDICTED: stress response protein NST1-like... 73 3e-18
ref|NP_001241310.1| uncharacterized protein LOC100807619 [Glycin... 76 8e-18
ref|XP_002276730.2| PREDICTED: la-related protein 6-like [Vitis ... 74 8e-18
ref|XP_006845325.1| hypothetical protein AMTR_s00141p00064150 [A... 72 7e-17
gb|ESW19889.1| hypothetical protein PHAVU_006G164000g [Phaseolus... 70 3e-16
gb|EOY27717.1| Translation initiation factor eIF-2B subunit delt... 68 3e-15
gb|EOY27722.1| Translation initiation factor eIF-2B subunit delt... 68 3e-15
ref|XP_003554803.1| PREDICTED: la-related protein 6-like isoform... 57 1e-14
ref|XP_006467479.1| PREDICTED: la-related protein 6-like [Citrus... 66 2e-14
gb|EMJ12644.1| hypothetical protein PRUPE_ppa007255mg [Prunus pe... 68 3e-14
ref|XP_002310383.2| hypothetical protein POPTR_0007s00450g [Popu... 55 6e-14
ref|XP_006380251.1| hypothetical protein POPTR_0007s00450g [Popu... 55 6e-14
gb|EOY06989.1| RNA-binding protein, putative isoform 1 [Theobrom... 52 1e-13
gb|EOY06990.1| RNA-binding protein, putative isoform 2 [Theobrom... 52 1e-13
ref|XP_003593945.1| La-related protein [Medicago truncatula] gi|... 61 3e-13
gb|EMJ01247.1| hypothetical protein PRUPE_ppa024894mg [Prunus pe... 52 1e-12
ref|XP_001774093.1| predicted protein [Physcomitrella patens] gi... 54 2e-12
gb|EOY06991.1| RNA-binding protein, putative isoform 3 [Theobrom... 52 3e-12
ref|XP_002323712.2| hypothetical protein POPTR_0017s04020g [Popu... 52 1e-11
>ref|XP_004486031.1| PREDICTED: la-related protein 7-like [Cicer arietinum]
Length = 426
Score = 77.0 bits (188), Expect(2) = 1e-18
Identities = 44/98 (44%), Positives = 59/98 (60%), Gaps = 1/98 (1%)
Frame = +2
Query: 2 FGKLGKILKITLHNPHLHHKSANNRTSGIIINSKTYALIEYGTAEAAASAITYFNHEDNW 181
F K G I KIT+H P SA + + I++K +AL+EY T EAA A+ N+E +W
Sbjct: 236 FQKAGNIKKITIHEPRSAADSAKHIKQEMFISTKLHALVEYETIEAAEKAVAMLNNEQDW 295
Query: 182 RSGMRVELQLTRMGKHGLALKGLK-RTYEKKSSAHVEE 292
R+GMRV+ L RMGK+G + K EK SS+HV E
Sbjct: 296 RNGMRVKF-LNRMGKNGHKKQAWKGSNTEKNSSSHVAE 332
Score = 42.7 bits (99), Expect(2) = 1e-18
Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 367 RYKGRGRGRIKQNLCSDARAQQFQQNGHTF-ANKSLQWPRMPDGTRGFAFGRGKP 528
RY +GR R + + + HT A+K PRMPDGTRGFA GRG+P
Sbjct: 366 RYNKQGRSRKHKYRAINGMGHGGTSSIHTAEASKPPPGPRMPDGTRGFAIGRGRP 420
>ref|XP_003542932.1| PREDICTED: stress response protein NST1-like isoform X1 [Glycine
max]
Length = 400
Score = 73.2 bits (178), Expect(2) = 3e-18
Identities = 39/98 (39%), Positives = 62/98 (63%), Gaps = 1/98 (1%)
Frame = +2
Query: 2 FGKLGKILKITLHNPHLHHKSANNRTSG-IIINSKTYALIEYGTAEAAASAITYFNHEDN 178
F + G I +IT+H+PH +SA ++I++K +AL+EY T EAA A+ N+E +
Sbjct: 211 FHEAGNIKRITIHDPHSTSESAKQHNKQEMLISNKLHALVEYETMEAAEKAVAMLNNEQD 270
Query: 179 WRSGMRVELQLTRMGKHGLALKGLKRTYEKKSSAHVEE 292
WR+GMRV+L L MGK+G + K + +K+S+ E+
Sbjct: 271 WRNGMRVKL-LKGMGKYGHKKQAWKGHHSEKNSSRPEQ 307
Score = 45.4 bits (106), Expect(2) = 3e-18
Identities = 24/55 (43%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 367 RYKGRGRGRIKQNLCSDARAQQFQQNGHTF-ANKSLQWPRMPDGTRGFAFGRGKP 528
RY+ +GR R + + + H A+KS PRMPDGTRGFA GRG+P
Sbjct: 340 RYRNQGRSRKHKYRAGNGMGHGSAPSTHAAEASKSPPGPRMPDGTRGFAVGRGRP 394
>ref|NP_001241310.1| uncharacterized protein LOC100807619 [Glycine max]
gi|255636971|gb|ACU18818.1| unknown [Glycine max]
Length = 405
Score = 75.9 bits (185), Expect(2) = 8e-18
Identities = 41/98 (41%), Positives = 62/98 (63%), Gaps = 1/98 (1%)
Frame = +2
Query: 2 FGKLGKILKITLHNPHLHHKSANNRTSGIIINSKTYALIEYGTAEAAASAITYFNHEDNW 181
F + G I +IT+H+PH +S + ++I++K +AL+EY T EAA A+ N+E +W
Sbjct: 215 FHEAGNIKRITIHDPHSTSESTRHIKQEMLISNKLHALVEYETIEAAEKAVAMLNNEQDW 274
Query: 182 RSGMRVELQLTRMGKHGLALKGLKRTY-EKKSSAHVEE 292
R+GMRV+L L MG +G + K ++ EK SS HV E
Sbjct: 275 RNGMRVKL-LKGMGTYGHKKQAWKGSHSEKNSSRHVSE 311
Score = 41.2 bits (95), Expect(2) = 8e-18
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +1
Query: 367 RYKGRGRGRIKQNLCSDARAQQFQQNGHTF-ANKSLQWPRMPDGTRGFAFGRGK 525
RY+ +GR R + + + H A+K PRMPDGTRGFA GRG+
Sbjct: 345 RYRNQGRSRKHKYRAGNGMGHGSTPSTHAAEASKPPPGPRMPDGTRGFAIGRGR 398
>ref|XP_002276730.2| PREDICTED: la-related protein 6-like [Vitis vinifera]
gi|297740679|emb|CBI30861.3| unnamed protein product
[Vitis vinifera]
Length = 342
Score = 73.6 bits (179), Expect(2) = 8e-18
Identities = 36/93 (38%), Positives = 58/93 (62%)
Frame = +2
Query: 2 FGKLGKILKITLHNPHLHHKSANNRTSGIIINSKTYALIEYGTAEAAASAITYFNHEDNW 181
FG G I KI +H+P+ +S + +I+ K +A+++Y T EAA A+ N+E +W
Sbjct: 152 FGAAGNIKKICIHDPYATEESTKDSRVEKLISGKLHAIVDYETVEAAERAVATLNNEQDW 211
Query: 182 RSGMRVELQLTRMGKHGLALKGLKRTYEKKSSA 280
R+GMRV+L +MGK+G KG K + +K+S+
Sbjct: 212 RNGMRVKLLHKQMGKYGQRRKGWKGSDMEKNSS 244
Score = 43.5 bits (101), Expect(2) = 8e-18
Identities = 23/60 (38%), Positives = 30/60 (50%)
Frame = +1
Query: 349 KGAPRNRYKGRGRGRIKQNLCSDARAQQFQQNGHTFANKSLQWPRMPDGTRGFAFGRGKP 528
K PR R +GR RG+ + + G +K P+MPDGTRGF GRG+P
Sbjct: 278 KNGPRGRNRGRSRGQKYRCMNGQGHGTLSSSYGAE-GSKPPPGPKMPDGTRGFTMGRGRP 336
>ref|XP_006845325.1| hypothetical protein AMTR_s00141p00064150 [Amborella trichopoda]
gi|548847861|gb|ERN07000.1| hypothetical protein
AMTR_s00141p00064150 [Amborella trichopoda]
Length = 450
Score = 72.0 bits (175), Expect(2) = 7e-17
Identities = 38/94 (40%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Frame = +2
Query: 2 FGKLGKILKITLHNPHLH-HKSANNRTSGIIINSKTYALIEYGTAEAAASAITYFNHEDN 178
FG +GK+ + + P H A + ++I+SK +AL+EY T EAA A+ N E N
Sbjct: 261 FGDVGKVNSVRITEPQSSTHAFAKSNKPEMMISSKLHALVEYETVEAAEKAVAVLNDERN 320
Query: 179 WRSGMRVELQLTRMGKHGLALKGLKRTYEKKSSA 280
WRSGMRV+L L RMG +G A + K + S++
Sbjct: 321 WRSGMRVQLLLKRMGMYGAAPRSRKGLVAESSNS 354
Score = 42.0 bits (97), Expect(2) = 7e-17
Identities = 22/56 (39%), Positives = 28/56 (50%)
Frame = +1
Query: 361 RNRYKGRGRGRIKQNLCSDARAQQFQQNGHTFANKSLQWPRMPDGTRGFAFGRGKP 528
R R +GRG+G + + +G K PRMPDGTRGF GRG+P
Sbjct: 392 RGRRRGRGKGHGQHHNDGHGAGLVCGISGSEAPMKQPPGPRMPDGTRGFTMGRGRP 447
>gb|ESW19889.1| hypothetical protein PHAVU_006G164000g [Phaseolus vulgaris]
Length = 395
Score = 70.5 bits (171), Expect(2) = 3e-16
Identities = 40/98 (40%), Positives = 62/98 (63%), Gaps = 1/98 (1%)
Frame = +2
Query: 2 FGKLGKILKITLHNPHLHHKSANNRTSGIIINSKTYALIEYGTAEAAASAITYFNHEDNW 181
F + G I +IT+++P +S + ++I++K +AL+EY T EAA A+ N+E +W
Sbjct: 203 FHEAGNIKRITINDPCSTSESTKHIKQEMLISNKLHALVEYETIEAAEKAVAMLNNEKDW 262
Query: 182 RSGMRVELQLTRMGKHGLALKGLK-RTYEKKSSAHVEE 292
R+GM+V+L L RMGK+G + K EK SS+HV E
Sbjct: 263 RNGMQVKL-LKRMGKYGHKKQAWKGSNSEKNSSSHVYE 299
Score = 41.6 bits (96), Expect(2) = 3e-16
Identities = 24/57 (42%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +1
Query: 367 RYKGRGRGRIKQNLCSDARAQQFQQNGHTFA---NKSLQWPRMPDGTRGFAFGRGKP 528
RYK +GR R + + T A +K PRMPDGTRGFA GRG+P
Sbjct: 333 RYKNQGRTRKLKYRAGAGNGMGHGSSPSTHAAEASKPPPGPRMPDGTRGFAIGRGRP 389
>gb|EOY27717.1| Translation initiation factor eIF-2B subunit delta, putative
isoform 1 [Theobroma cacao]
Length = 387
Score = 67.8 bits (164), Expect(2) = 3e-15
Identities = 35/92 (38%), Positives = 59/92 (64%)
Frame = +2
Query: 2 FGKLGKILKITLHNPHLHHKSANNRTSGIIINSKTYALIEYGTAEAAASAITYFNHEDNW 181
FG++G+I I++++P +S + I+I+SK +AL+EY T EAA A+ N E +W
Sbjct: 198 FGEVGRIKNISIYDPLAVEESKKKGRADILISSKIHALVEYETVEAAEKAVATLNDEQDW 257
Query: 182 RSGMRVELQLTRMGKHGLALKGLKRTYEKKSS 277
R+GMRV+L L R+ K+G + + + +K+S
Sbjct: 258 RNGMRVKL-LKRVSKYGQRRQAWRGSDPEKNS 288
Score = 40.8 bits (94), Expect(2) = 3e-15
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +1
Query: 364 NRYKGRGRGRIKQNLCSDARAQQFQQNGHTFANKSLQWPRMPDGTRGFAFGRGKP 528
+R++ RGR R +++ ++ +K PRMPDGTRGF GRG+P
Sbjct: 327 HRFRNRGRARRQKHRGTNGLGHGSTSAHAIEPSKPPPGPRMPDGTRGFTMGRGRP 381
>gb|EOY27722.1| Translation initiation factor eIF-2B subunit delta, putative
isoform 6 [Theobroma cacao]
Length = 304
Score = 67.8 bits (164), Expect(2) = 3e-15
Identities = 35/92 (38%), Positives = 59/92 (64%)
Frame = +2
Query: 2 FGKLGKILKITLHNPHLHHKSANNRTSGIIINSKTYALIEYGTAEAAASAITYFNHEDNW 181
FG++G+I I++++P +S + I+I+SK +AL+EY T EAA A+ N E +W
Sbjct: 115 FGEVGRIKNISIYDPLAVEESKKKGRADILISSKIHALVEYETVEAAEKAVATLNDEQDW 174
Query: 182 RSGMRVELQLTRMGKHGLALKGLKRTYEKKSS 277
R+GMRV+L L R+ K+G + + + +K+S
Sbjct: 175 RNGMRVKL-LKRVSKYGQRRQAWRGSDPEKNS 205
Score = 40.8 bits (94), Expect(2) = 3e-15
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +1
Query: 364 NRYKGRGRGRIKQNLCSDARAQQFQQNGHTFANKSLQWPRMPDGTRGFAFGRGKP 528
+R++ RGR R +++ ++ +K PRMPDGTRGF GRG+P
Sbjct: 244 HRFRNRGRARRQKHRGTNGLGHGSTSAHAIEPSKPPPGPRMPDGTRGFTMGRGRP 298
>ref|XP_003554803.1| PREDICTED: la-related protein 6-like isoform 1 [Glycine max]
Length = 467
Score = 56.6 bits (135), Expect(2) = 1e-14
Identities = 36/108 (33%), Positives = 54/108 (50%), Gaps = 8/108 (7%)
Frame = +2
Query: 2 FGKLGKILKITLHNPHLHHKSANN-----RTSGIIINSKTYALIEYGTAEAAASAITYFN 166
F +G + I P + A++ + G+ +++K +A +EY + E A A+ N
Sbjct: 262 FSAVGSVKTIRTCPPQTSNSGASSASRLGKVDGMPLSNKLHAFVEYESVELAERAVAELN 321
Query: 167 HEDNWRSGMRVELQLTRMGK--HGLALKGLK-RTYEKKSSAHVEEPNA 301
E NWRSG+RV L L RM K G KGL ++ S +V EP A
Sbjct: 322 EEGNWRSGLRVRLMLRRMSKPAQGRGKKGLDVEVGCEEDSPYVPEPQA 369
Score = 49.7 bits (117), Expect(2) = 1e-14
Identities = 32/68 (47%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Frame = +1
Query: 343 QGKGAPRNRYKGRGRGRIKQNLCSDARAQQFQQNGHTFAN----KSLQWPRMPDGTRGFA 510
Q KG R R KGRGR QN R N F + K PRMPDGTRGF+
Sbjct: 400 QRKGRSRGRGKGRGRVHCHQN----NRVGTPSSNNTIFTDQVVAKQPPGPRMPDGTRGFS 455
Query: 511 FGRGKPEA 534
GRGKP A
Sbjct: 456 MGRGKPVA 463
>ref|XP_006467479.1| PREDICTED: la-related protein 6-like [Citrus sinensis]
Length = 381
Score = 66.2 bits (160), Expect(2) = 2e-14
Identities = 34/99 (34%), Positives = 58/99 (58%), Gaps = 1/99 (1%)
Frame = +2
Query: 2 FGKLGKILKITLHNPHLHHKSANNRTSGIIINSKTYALIEYGTAEAAASAITYFNHEDNW 181
F + GKI I + +P++ +S + ++++K +A +EY T EAA A+ N E +W
Sbjct: 188 FAEAGKIKSICIRDPNVVEESKKSSKYEYLVSNKLHAFVEYETVEAAEKAVATLNDEQDW 247
Query: 182 RSGMRVELQLTRMGKHGLALKGLKRT-YEKKSSAHVEEP 295
R+G+RV+L L RMG +G + + + YEK +S +P
Sbjct: 248 RNGLRVKL-LKRMGNYGQRRQAWRGSDYEKNNSGRTSDP 285
Score = 39.3 bits (90), Expect(2) = 2e-14
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 11/63 (17%)
Frame = +1
Query: 373 KGRGRGRIKQNLCSDARAQQFQQN----GH-TFANKSLQ------WPRMPDGTRGFAFGR 519
KGR RGR +R Q+++ GH T ++ +L+ PRMPDGTRGF+ GR
Sbjct: 321 KGRNRGR--------SRRQRYRGGPNGLGHGTTSSHALEPTKPPPGPRMPDGTRGFSMGR 372
Query: 520 GKP 528
G+P
Sbjct: 373 GRP 375
>gb|EMJ12644.1| hypothetical protein PRUPE_ppa007255mg [Prunus persica]
Length = 376
Score = 67.8 bits (164), Expect(2) = 3e-14
Identities = 35/94 (37%), Positives = 57/94 (60%)
Frame = +2
Query: 2 FGKLGKILKITLHNPHLHHKSANNRTSGIIINSKTYALIEYGTAEAAASAITYFNHEDNW 181
FG+ G I + + +PH S + +I++K +AL+EY T EAA A+T N+E++W
Sbjct: 182 FGEAGNIKDVCILDPHAIEASTKGSKAEKLISNKLHALVEYDTVEAADKAVTTLNNEEDW 241
Query: 182 RSGMRVELQLTRMGKHGLALKGLKRTYEKKSSAH 283
R+GMRV+ L +MGK+G + + +KSS +
Sbjct: 242 RNGMRVK-HLKQMGKYGQRKQAWRGFDSEKSSGN 274
Score = 37.4 bits (85), Expect(2) = 3e-14
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 6/61 (9%)
Frame = +1
Query: 361 RNRYKGRGRGRIKQNLCSDARAQQFQQNGHTFANKSLQ------WPRMPDGTRGFAFGRG 522
+N ++GR RG Q+ R +G + AN ++ PRMPDGTRGF GRG
Sbjct: 310 KNGHRGRNRG---QSGRQKYRVTNGFGHGTSSANHGIEPSKPPPGPRMPDGTRGFTMGRG 366
Query: 523 K 525
+
Sbjct: 367 R 367
>ref|XP_002310383.2| hypothetical protein POPTR_0007s00450g [Populus trichocarpa]
gi|550333821|gb|EEE90833.2| hypothetical protein
POPTR_0007s00450g [Populus trichocarpa]
Length = 516
Score = 54.7 bits (130), Expect(2) = 6e-14
Identities = 33/74 (44%), Positives = 36/74 (48%), Gaps = 8/74 (10%)
Frame = +1
Query: 337 GKQGKGAPRNRYKGRGRGRIKQNLCSDARAQQFQQNG--------HTFANKSLQWPRMPD 492
G Q KG R R KGRGRG+ N + R + H K PRMPD
Sbjct: 438 GAQRKGRNRGRGKGRGRGQYHHNNHHNNRGNHLGTSPSNNPVIGEHPAMAKQPPGPRMPD 497
Query: 493 GTRGFAFGRGKPEA 534
GTRGFA GRGKP A
Sbjct: 498 GTRGFAMGRGKPAA 511
Score = 49.3 bits (116), Expect(2) = 6e-14
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Frame = +2
Query: 62 SANNRTSGIIINSKTYALIEYGTAEAAASAITYFNHEDNWRSGMRVELQLTRMGKHGLAL 241
S + + G+ ++K +A +EY T E A A+ N E NWRSG+RV L L R K A
Sbjct: 325 SRSAKADGMHFSNKLHAFVEYETIEIAEKAVAELNDEGNWRSGLRVRLMLKRGSKSTQAR 384
Query: 242 -----KGLKRTYEKKSSAHVEEPN 298
G + E + SA + PN
Sbjct: 385 GKKGHDGQGHSEEDEISATEQMPN 408
>ref|XP_006380251.1| hypothetical protein POPTR_0007s00450g [Populus trichocarpa]
gi|550333820|gb|ERP58048.1| hypothetical protein
POPTR_0007s00450g [Populus trichocarpa]
Length = 515
Score = 54.7 bits (130), Expect(2) = 6e-14
Identities = 33/74 (44%), Positives = 36/74 (48%), Gaps = 8/74 (10%)
Frame = +1
Query: 337 GKQGKGAPRNRYKGRGRGRIKQNLCSDARAQQFQQNG--------HTFANKSLQWPRMPD 492
G Q KG R R KGRGRG+ N + R + H K PRMPD
Sbjct: 437 GAQRKGRNRGRGKGRGRGQYHHNNHHNNRGNHLGTSPSNNPVIGEHPAMAKQPPGPRMPD 496
Query: 493 GTRGFAFGRGKPEA 534
GTRGFA GRGKP A
Sbjct: 497 GTRGFAMGRGKPAA 510
Score = 49.3 bits (116), Expect(2) = 6e-14
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Frame = +2
Query: 62 SANNRTSGIIINSKTYALIEYGTAEAAASAITYFNHEDNWRSGMRVELQLTRMGKHGLAL 241
S + + G+ ++K +A +EY T E A A+ N E NWRSG+RV L L R K A
Sbjct: 325 SRSAKADGMHFSNKLHAFVEYETIEIAEKAVAELNDEGNWRSGLRVRLMLKRGSKSTQAR 384
Query: 242 -----KGLKRTYEKKSSAHVEEPN 298
G + E + SA + PN
Sbjct: 385 GKKGHDGQGHSEEDEISATEQMPN 408
>gb|EOY06989.1| RNA-binding protein, putative isoform 1 [Theobroma cacao]
Length = 500
Score = 52.4 bits (124), Expect(2) = 1e-13
Identities = 32/78 (41%), Positives = 36/78 (46%), Gaps = 9/78 (11%)
Frame = +1
Query: 337 GKQGKGAPRNRYKGRGRGRIKQNLCSD---------ARAQQFQQNGHTFANKSLQWPRMP 489
G Q KG R R KGRGR + N + + N K PRMP
Sbjct: 422 GGQKKGRNRGRGKGRGRAQYHNNQHNSRGNHVGTPPSATSNLVSNEQATVAKQPPGPRMP 481
Query: 490 DGTRGFAFGRGKPEAKST 543
DGTRGFA GRGKP A +T
Sbjct: 482 DGTRGFAMGRGKPVAVNT 499
Score = 50.4 bits (119), Expect(2) = 1e-13
Identities = 33/107 (30%), Positives = 48/107 (44%), Gaps = 7/107 (6%)
Frame = +2
Query: 2 FGKLGKILKITLHNPH-----LHHKSANNRTSGIIINSKTYALIEYGTAEAAASAITYFN 166
F +G + I P + S ++ G+ ++K +A +EY + E A A+ N
Sbjct: 285 FSSVGSVKTIRTCQPQPSGGGVSSASRTAKSDGMHFSNKLHAFVEYESVELAEKAVAELN 344
Query: 167 HEDNWRSGMRVELQLTRMGK--HGLALKGLKRTYEKKSSAHVEEPNA 301
E NWRSG+RV L L R+ K H KG H EE +A
Sbjct: 345 DEGNWRSGLRVRLMLRRVSKPTHTRGKKG------HDGEGHYEEDDA 385
>gb|EOY06990.1| RNA-binding protein, putative isoform 2 [Theobroma cacao]
Length = 431
Score = 52.4 bits (124), Expect(2) = 1e-13
Identities = 32/78 (41%), Positives = 36/78 (46%), Gaps = 9/78 (11%)
Frame = +1
Query: 337 GKQGKGAPRNRYKGRGRGRIKQNLCSD---------ARAQQFQQNGHTFANKSLQWPRMP 489
G Q KG R R KGRGR + N + + N K PRMP
Sbjct: 353 GGQKKGRNRGRGKGRGRAQYHNNQHNSRGNHVGTPPSATSNLVSNEQATVAKQPPGPRMP 412
Query: 490 DGTRGFAFGRGKPEAKST 543
DGTRGFA GRGKP A +T
Sbjct: 413 DGTRGFAMGRGKPVAVNT 430
Score = 50.4 bits (119), Expect(2) = 1e-13
Identities = 33/107 (30%), Positives = 48/107 (44%), Gaps = 7/107 (6%)
Frame = +2
Query: 2 FGKLGKILKITLHNPH-----LHHKSANNRTSGIIINSKTYALIEYGTAEAAASAITYFN 166
F +G + I P + S ++ G+ ++K +A +EY + E A A+ N
Sbjct: 216 FSSVGSVKTIRTCQPQPSGGGVSSASRTAKSDGMHFSNKLHAFVEYESVELAEKAVAELN 275
Query: 167 HEDNWRSGMRVELQLTRMGK--HGLALKGLKRTYEKKSSAHVEEPNA 301
E NWRSG+RV L L R+ K H KG H EE +A
Sbjct: 276 DEGNWRSGLRVRLMLRRVSKPTHTRGKKG------HDGEGHYEEDDA 316
>ref|XP_003593945.1| La-related protein [Medicago truncatula]
gi|355482993|gb|AES64196.1| La-related protein [Medicago
truncatula] gi|388506372|gb|AFK41252.1| unknown
[Medicago truncatula]
Length = 406
Score = 60.8 bits (146), Expect(2) = 3e-13
Identities = 38/95 (40%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
Frame = +2
Query: 14 GKILKITLHNPHLHHKSANNRTSGIIINSKTYALIEYGTAEAAASAITYFNHEDNWRSGM 193
G I K+T+++P SA + I SK +AL+EY T E A A+ N+E++WR+GM
Sbjct: 219 GNIKKLTINDPRSTAASAKHIKQDKFIGSKLHALVEYETIEGAEKAVAMLNNEEDWRNGM 278
Query: 194 RVELQLTRMG-KHGLALKGLK-RTYEKKSSAHVEE 292
RV+ L+RM K+ + LK EK S+HV E
Sbjct: 279 RVKF-LSRMAVKYVQKKQPLKGSNSEKNGSSHVSE 312
Score = 40.8 bits (94), Expect(2) = 3e-13
Identities = 27/66 (40%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Frame = +1
Query: 349 KGAPRNRYKGRGRGRIKQNLCSDARAQQFQQNGHTFANKSLQ------WPRMPDGTRGFA 510
KG RN +GR R KQ RA +G T + ++ + P+MPDGTRGFA
Sbjct: 342 KGGQRNSKQGRSR---KQKY----RATNGMGHGGTSSIRTTEPSKPPPGPKMPDGTRGFA 394
Query: 511 FGRGKP 528
GRG+P
Sbjct: 395 IGRGRP 400
>gb|EMJ01247.1| hypothetical protein PRUPE_ppa024894mg [Prunus persica]
Length = 401
Score = 52.4 bits (124), Expect(2) = 1e-12
Identities = 32/89 (35%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Frame = +2
Query: 2 FGKLGKILKITLHNPHLHHKSANNRTSG-IIINSKTYALIEYGTAEAAASAITYFNHEDN 178
F +G + I + +PH +S ++R+ G II++K +AL+EY T + A A+ + E N
Sbjct: 211 FSVVGSVKTIRICHPH---ESNSSRSKGDFIISNKLHALVEYETTDIAERAVDKLSDERN 267
Query: 179 WRSGMRVELQLTRMGKHGLALKGLKRTYE 265
WR G+RV L L R K LK K ++
Sbjct: 268 WRKGLRVRLLLRRSPKS--VLKNRKSDFD 294
Score = 47.4 bits (111), Expect(2) = 1e-12
Identities = 24/63 (38%), Positives = 35/63 (55%)
Frame = +1
Query: 340 KQGKGAPRNRYKGRGRGRIKQNLCSDARAQQFQQNGHTFANKSLQWPRMPDGTRGFAFGR 519
K+G R + +GRG+G+ + L + + A ++ + PRMPDGTRGF GR
Sbjct: 332 KKGWAWGRGKARGRGQGQSGRGLIAPSPQSSNTIQCEAPAKQNAKGPRMPDGTRGFTMGR 391
Query: 520 GKP 528
GKP
Sbjct: 392 GKP 394
>ref|XP_001774093.1| predicted protein [Physcomitrella patens]
gi|162674639|gb|EDQ61145.1| predicted protein
[Physcomitrella patens]
Length = 295
Score = 54.3 bits (129), Expect(2) = 2e-12
Identities = 34/101 (33%), Positives = 55/101 (54%), Gaps = 4/101 (3%)
Frame = +2
Query: 2 FGKLGKILKITLHNPHLHH----KSANNRTSGIIINSKTYALIEYGTAEAAASAITYFNH 169
FGK+GK+ + + P + + SA + + I+I++K +AL+E+ T E A A+ +
Sbjct: 89 FGKVGKVKSVRICPPEVANGAISSSAKHPKTDILISNKLHALVEFETVELAEKAVVELTN 148
Query: 170 EDNWRSGMRVELQLTRMGKHGLALKGLKRTYEKKSSAHVEE 292
E NWRSG+R L L R + G K L++ +K EE
Sbjct: 149 ERNWRSGLRTRL-LQRRQEEG---KKLEKNGDKPHDKGSEE 185
Score = 44.3 bits (103), Expect(2) = 2e-12
Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Frame = +1
Query: 337 GKQGKGAPRN-RYKGRGRGRIKQNLCSDARAQQFQQNGHTFAN---KSLQWPRMPDGTRG 504
GK+G+G R R G GRGR +Q + + + H + K PRMPDGTRG
Sbjct: 217 GKKGRGRGRGGRAGGGGRGRGQQFYNTHSGTPPRDNSLHLVSELVGKPPPGPRMPDGTRG 276
Query: 505 FAFGRGKPEAKST 543
F+ GRGK A +T
Sbjct: 277 FSTGRGKTLAVNT 289
>gb|EOY06991.1| RNA-binding protein, putative isoform 3 [Theobroma cacao]
Length = 501
Score = 52.4 bits (124), Expect(2) = 3e-12
Identities = 32/78 (41%), Positives = 36/78 (46%), Gaps = 9/78 (11%)
Frame = +1
Query: 337 GKQGKGAPRNRYKGRGRGRIKQNLCSD---------ARAQQFQQNGHTFANKSLQWPRMP 489
G Q KG R R KGRGR + N + + N K PRMP
Sbjct: 423 GGQKKGRNRGRGKGRGRAQYHNNQHNSRGNHVGTPPSATSNLVSNEQATVAKQPPGPRMP 482
Query: 490 DGTRGFAFGRGKPEAKST 543
DGTRGFA GRGKP A +T
Sbjct: 483 DGTRGFAMGRGKPVAVNT 500
Score = 45.8 bits (107), Expect(2) = 3e-12
Identities = 33/108 (30%), Positives = 48/108 (44%), Gaps = 8/108 (7%)
Frame = +2
Query: 2 FGKLGKILKITLHNPH-----LHHKSANNRTSGIIINSKTYALIEYGTAEAAASAITY-F 163
F +G + I P + S ++ G+ ++K +A +EY + E A A+
Sbjct: 285 FSSVGSVKTIRTCQPQPSGGGVSSASRTAKSDGMHFSNKLHAFVEYESVELAEKAVVAEL 344
Query: 164 NHEDNWRSGMRVELQLTRMGK--HGLALKGLKRTYEKKSSAHVEEPNA 301
N E NWRSG+RV L L R+ K H KG H EE +A
Sbjct: 345 NDEGNWRSGLRVRLMLRRVSKPTHTRGKKG------HDGEGHYEEDDA 386
>ref|XP_002323712.2| hypothetical protein POPTR_0017s04020g [Populus trichocarpa]
gi|550319329|gb|EEF03845.2| hypothetical protein
POPTR_0017s04020g [Populus trichocarpa]
Length = 483
Score = 52.0 bits (123), Expect(2) = 1e-11
Identities = 27/79 (34%), Positives = 41/79 (51%)
Frame = +2
Query: 62 SANNRTSGIIINSKTYALIEYGTAEAAASAITYFNHEDNWRSGMRVELQLTRMGKHGLAL 241
S + + G+ ++K +A +EY T E A A+ N E NWRSG++V L L R +
Sbjct: 304 SRSGKADGMHFSNKLHAFVEYETVEIAEKAVAELNDEGNWRSGLKVRLMLKRGAQGKKGH 363
Query: 242 KGLKRTYEKKSSAHVEEPN 298
G + E + SA + PN
Sbjct: 364 DGQGHSEEDEVSAFEQMPN 382
Score = 44.3 bits (103), Expect(2) = 1e-11
Identities = 29/75 (38%), Positives = 33/75 (44%), Gaps = 16/75 (21%)
Frame = +1
Query: 349 KGAPRNRYKGRGRGRIKQNLCSDARAQQFQQNGHTFAN----------------KSLQWP 480
+GA R R +GRG+GR R Q N H+ K P
Sbjct: 410 EGAQRKRNRGRGKGR--------GRGQYHHNNHHSNHGGTPPSNPVLGEHLTMAKQPPGP 461
Query: 481 RMPDGTRGFAFGRGK 525
RMPDGTRGFA GRGK
Sbjct: 462 RMPDGTRGFAMGRGK 476