BLASTX nr result
ID: Zingiber25_contig00024491
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00024491
(351 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003575201.1| PREDICTED: riboflavin biosynthesis protein r... 91 1e-16
ref|XP_006659510.1| PREDICTED: probable bifunctional riboflavin ... 86 4e-15
sp|Q6Z234.1|RIBA1_ORYSJ RecName: Full=Probable bifunctional ribo... 86 5e-15
ref|XP_002266093.2| PREDICTED: riboflavin biosynthesis protein r... 86 7e-15
gb|EEE68880.1| hypothetical protein OsJ_27700 [Oryza sativa Japo... 86 7e-15
gb|EAZ07384.1| hypothetical protein OsI_29636 [Oryza sativa Indi... 86 7e-15
ref|XP_002444846.1| hypothetical protein SORBIDRAFT_07g029180 [S... 85 1e-14
ref|XP_006492616.1| PREDICTED: bifunctional riboflavin biosynthe... 84 1e-14
ref|XP_006423827.1| hypothetical protein CICLE_v10028107mg [Citr... 84 1e-14
ref|XP_006423826.1| hypothetical protein CICLE_v10028107mg [Citr... 84 1e-14
gb|EMT04481.1| Riboflavin biosynthesis protein ribBA, chloroplas... 84 2e-14
gb|EMS48054.1| Riboflavin biosynthesis protein ribBA, chloroplas... 84 2e-14
ref|XP_004288160.1| PREDICTED: riboflavin biosynthesis protein r... 82 7e-14
ref|XP_004952849.1| PREDICTED: riboflavin biosynthesis protein r... 81 1e-13
ref|XP_004952848.1| PREDICTED: riboflavin biosynthesis protein r... 81 1e-13
ref|XP_006647406.1| PREDICTED: probable bifunctional riboflavin ... 81 2e-13
ref|XP_004973726.1| PREDICTED: riboflavin biosynthesis protein r... 81 2e-13
ref|XP_003574656.1| PREDICTED: riboflavin biosynthesis protein r... 80 2e-13
ref|XP_003574655.1| PREDICTED: riboflavin biosynthesis protein r... 80 2e-13
ref|NP_001159237.1| hypothetical protein [Zea mays] gi|223942917... 80 3e-13
>ref|XP_003575201.1| PREDICTED: riboflavin biosynthesis protein ribBA,
chloroplastic-like [Brachypodium distachyon]
Length = 554
Score = 91.3 bits (225), Expect = 1e-16
Identities = 62/118 (52%), Positives = 74/118 (62%), Gaps = 4/118 (3%)
Frame = -2
Query: 344 NLTSNGFRKATCAASKADSGFASLPISPEDDVLIQQSTIIEKDD-STSNSKYPSDSSALA 168
N+ S G R A A+ K S F DD L+ +ST + D T++S P+DS +
Sbjct: 48 NVKSVGLRVA--ASLKNISSFPDEGYLENDDTLLPKSTSVRGQDYPTTDSVLPTDSIVVP 105
Query: 167 EGIS-DIAVIPENFSINND--EPDLDSPTEGFSSISEAIEDIRQGKFVIVVDDEDREN 3
E IS D+ + FS +ND E DLDSPTEGFSSISEAIEDIRQGK VIVVDDE REN
Sbjct: 106 EIISTDLFRAVDTFSNDNDDTEHDLDSPTEGFSSISEAIEDIRQGKLVIVVDDESREN 163
>ref|XP_006659510.1| PREDICTED: probable bifunctional riboflavin biosynthesis protein
RIBA 1, chloroplastic-like [Oryza brachyantha]
Length = 538
Score = 86.3 bits (212), Expect = 4e-15
Identities = 54/115 (46%), Positives = 73/115 (63%), Gaps = 1/115 (0%)
Frame = -2
Query: 344 NLTSNGFRKATCAASKADSGFA-SLPISPEDDVLIQQSTIIEKDDSTSNSKYPSDSSALA 168
N TSN RK C+ A++ A + IS ++ +I + + +D++AL
Sbjct: 33 NATSNNLRKI-CSVHLANTHRARNFHISHATGDSSER--VIINGQANPSKLVQADAAALG 89
Query: 167 EGISDIAVIPENFSINNDEPDLDSPTEGFSSISEAIEDIRQGKFVIVVDDEDREN 3
+D+A + + FS ++DE DLDSPTEGFSSI EAIEDIRQGK+VIVVDDEDREN
Sbjct: 90 TIAADMAPVVDGFSADDDELDLDSPTEGFSSIPEAIEDIRQGKYVIVVDDEDREN 144
>sp|Q6Z234.1|RIBA1_ORYSJ RecName: Full=Probable bifunctional riboflavin biosynthesis protein
RIBA 1, chloroplastic; Short=OsRIBA1; Includes: RecName:
Full=3,4-dihydroxy-2-butanone 4-phosphate synthase;
Short=DHBP synthase; Includes: RecName: Full=GTP
cyclohydrolase-2; AltName: Full=GTP cyclohydrolase II;
Flags: Precursor gi|42408149|dbj|BAD09287.1| putative
riboflavin biosynthesis protein ribA [Oryza sativa
Japonica Group] gi|42409035|dbj|BAD10288.1| putative
riboflavin biosynthesis protein ribA [Oryza sativa
Japonica Group]
Length = 538
Score = 85.9 bits (211), Expect = 5e-15
Identities = 43/76 (56%), Positives = 57/76 (75%)
Frame = -2
Query: 230 IIEKDDSTSNSKYPSDSSALAEGISDIAVIPENFSINNDEPDLDSPTEGFSSISEAIEDI 51
+I ++ + +D++AL +D+A + + FS ++DE DLDSPTEGFSSI EAIEDI
Sbjct: 61 VIINGQASPSKVVQADAAALGTIAADMAPVVDGFSADDDELDLDSPTEGFSSIPEAIEDI 120
Query: 50 RQGKFVIVVDDEDREN 3
RQGK+VIVVDDEDREN
Sbjct: 121 RQGKYVIVVDDEDREN 136
>ref|XP_002266093.2| PREDICTED: riboflavin biosynthesis protein ribBA,
chloroplastic-like [Vitis vinifera]
gi|297741836|emb|CBI33149.3| unnamed protein product
[Vitis vinifera]
Length = 534
Score = 85.5 bits (210), Expect = 7e-15
Identities = 47/112 (41%), Positives = 67/112 (59%), Gaps = 2/112 (1%)
Frame = -2
Query: 332 NGFRKATCAASKADSGFASLPISPEDDVLIQQST--IIEKDDSTSNSKYPSDSSALAEGI 159
+ + +C + KA+ + +S D +L S+ ++E+D + + ++
Sbjct: 38 SSINRQSCLSLKANGRGIAALVSGNDGLLSYSSSSGMVEEDAFFNEQADQPEGTSFGTLA 97
Query: 158 SDIAVIPENFSINNDEPDLDSPTEGFSSISEAIEDIRQGKFVIVVDDEDREN 3
++I F NNDE DLD PTEGFSS++EAIEDIRQGKFVIVVDDEDREN
Sbjct: 98 AEITSTTSEFFYNNDELDLDCPTEGFSSVAEAIEDIRQGKFVIVVDDEDREN 149
>gb|EEE68880.1| hypothetical protein OsJ_27700 [Oryza sativa Japonica Group]
Length = 525
Score = 85.5 bits (210), Expect = 7e-15
Identities = 42/62 (67%), Positives = 52/62 (83%)
Frame = -2
Query: 188 SDSSALAEGISDIAVIPENFSINNDEPDLDSPTEGFSSISEAIEDIRQGKFVIVVDDEDR 9
+D++AL +D+A + + FS ++DE DLDSPTEGFSSI EAIEDIRQGK+VIVVDDEDR
Sbjct: 62 ADAAALGTIAADMAPVVDGFSADDDELDLDSPTEGFSSIPEAIEDIRQGKYVIVVDDEDR 121
Query: 8 EN 3
EN
Sbjct: 122 EN 123
>gb|EAZ07384.1| hypothetical protein OsI_29636 [Oryza sativa Indica Group]
Length = 510
Score = 85.5 bits (210), Expect = 7e-15
Identities = 42/62 (67%), Positives = 52/62 (83%)
Frame = -2
Query: 188 SDSSALAEGISDIAVIPENFSINNDEPDLDSPTEGFSSISEAIEDIRQGKFVIVVDDEDR 9
+D++AL +D+A + + FS ++DE DLDSPTEGFSSI EAIEDIRQGK+VIVVDDEDR
Sbjct: 62 ADAAALGTIAADMAPVVDGFSADDDELDLDSPTEGFSSIPEAIEDIRQGKYVIVVDDEDR 121
Query: 8 EN 3
EN
Sbjct: 122 EN 123
>ref|XP_002444846.1| hypothetical protein SORBIDRAFT_07g029180 [Sorghum bicolor]
gi|241941196|gb|EES14341.1| hypothetical protein
SORBIDRAFT_07g029180 [Sorghum bicolor]
Length = 547
Score = 84.7 bits (208), Expect = 1e-14
Identities = 45/79 (56%), Positives = 59/79 (74%)
Frame = -2
Query: 239 QSTIIEKDDSTSNSKYPSDSSALAEGISDIAVIPENFSINNDEPDLDSPTEGFSSISEAI 60
++ II + SN+ +D+ AL +D+A + + FS+++DE DLD PTEGFSSI EAI
Sbjct: 61 ENVIINGKANPSNA-VQADAVALGTIAADMAPVVDGFSVDDDELDLDFPTEGFSSIPEAI 119
Query: 59 EDIRQGKFVIVVDDEDREN 3
EDIRQGK+VIVVDDEDREN
Sbjct: 120 EDIRQGKYVIVVDDEDREN 138
>ref|XP_006492616.1| PREDICTED: bifunctional riboflavin biosynthesis protein RIBA 1,
chloroplastic-like [Citrus sinensis]
Length = 564
Score = 84.3 bits (207), Expect = 1e-14
Identities = 50/96 (52%), Positives = 59/96 (61%)
Frame = -2
Query: 290 SGFASLPISPEDDVLIQQSTIIEKDDSTSNSKYPSDSSALAEGISDIAVIPENFSINNDE 111
SG L P + L+ +ST DD + D+ A +D A FS ++DE
Sbjct: 70 SGEGDLLAYPNGNNLVAEST--GADDQLVGIELQPDAIAFGALAADTAPTTFGFSSDDDE 127
Query: 110 PDLDSPTEGFSSISEAIEDIRQGKFVIVVDDEDREN 3
DLDSPTEGFSSI EAIEDIRQGKFV+VVDDEDREN
Sbjct: 128 FDLDSPTEGFSSIPEAIEDIRQGKFVVVVDDEDREN 163
>ref|XP_006423827.1| hypothetical protein CICLE_v10028107mg [Citrus clementina]
gi|557525761|gb|ESR37067.1| hypothetical protein
CICLE_v10028107mg [Citrus clementina]
Length = 564
Score = 84.3 bits (207), Expect = 1e-14
Identities = 50/96 (52%), Positives = 59/96 (61%)
Frame = -2
Query: 290 SGFASLPISPEDDVLIQQSTIIEKDDSTSNSKYPSDSSALAEGISDIAVIPENFSINNDE 111
SG L P + L+ +ST DD + D+ A +D A FS ++DE
Sbjct: 70 SGEGDLLAYPNGNNLVAEST--GADDQLVGIELQPDAIAFGALAADTAPTTFGFSSDDDE 127
Query: 110 PDLDSPTEGFSSISEAIEDIRQGKFVIVVDDEDREN 3
DLDSPTEGFSSI EAIEDIRQGKFV+VVDDEDREN
Sbjct: 128 FDLDSPTEGFSSIPEAIEDIRQGKFVVVVDDEDREN 163
>ref|XP_006423826.1| hypothetical protein CICLE_v10028107mg [Citrus clementina]
gi|557525760|gb|ESR37066.1| hypothetical protein
CICLE_v10028107mg [Citrus clementina]
Length = 488
Score = 84.3 bits (207), Expect = 1e-14
Identities = 50/96 (52%), Positives = 59/96 (61%)
Frame = -2
Query: 290 SGFASLPISPEDDVLIQQSTIIEKDDSTSNSKYPSDSSALAEGISDIAVIPENFSINNDE 111
SG L P + L+ +ST DD + D+ A +D A FS ++DE
Sbjct: 70 SGEGDLLAYPNGNNLVAEST--GADDQLVGIELQPDAIAFGALAADTAPTTFGFSSDDDE 127
Query: 110 PDLDSPTEGFSSISEAIEDIRQGKFVIVVDDEDREN 3
DLDSPTEGFSSI EAIEDIRQGKFV+VVDDEDREN
Sbjct: 128 FDLDSPTEGFSSIPEAIEDIRQGKFVVVVDDEDREN 163
>gb|EMT04481.1| Riboflavin biosynthesis protein ribBA, chloroplastic [Aegilops
tauschii]
Length = 558
Score = 84.0 bits (206), Expect = 2e-14
Identities = 42/76 (55%), Positives = 56/76 (73%)
Frame = -2
Query: 230 IIEKDDSTSNSKYPSDSSALAEGISDIAVIPENFSINNDEPDLDSPTEGFSSISEAIEDI 51
I+ ++ + +D++AL +D+A + + FS ++DE DLD PTEGFSSI EAIEDI
Sbjct: 79 IVVNGQASPSKTVQADAAALGTISADMAPVVDGFSADDDELDLDLPTEGFSSIPEAIEDI 138
Query: 50 RQGKFVIVVDDEDREN 3
RQGK+VIVVDDEDREN
Sbjct: 139 RQGKYVIVVDDEDREN 154
>gb|EMS48054.1| Riboflavin biosynthesis protein ribBA, chloroplastic [Triticum
urartu]
Length = 552
Score = 84.0 bits (206), Expect = 2e-14
Identities = 42/76 (55%), Positives = 56/76 (73%)
Frame = -2
Query: 230 IIEKDDSTSNSKYPSDSSALAEGISDIAVIPENFSINNDEPDLDSPTEGFSSISEAIEDI 51
I+ ++ + +D++AL +D+A + + FS ++DE DLD PTEGFSSI EAIEDI
Sbjct: 79 IVINGQASPSKTVQADAAALGTIAADMAPVVDGFSADDDELDLDLPTEGFSSIPEAIEDI 138
Query: 50 RQGKFVIVVDDEDREN 3
RQGK+VIVVDDEDREN
Sbjct: 139 RQGKYVIVVDDEDREN 154
>ref|XP_004288160.1| PREDICTED: riboflavin biosynthesis protein ribBA,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 537
Score = 82.0 bits (201), Expect = 7e-14
Identities = 48/103 (46%), Positives = 62/103 (60%)
Frame = -2
Query: 311 CAASKADSGFASLPISPEDDVLIQQSTIIEKDDSTSNSKYPSDSSALAEGISDIAVIPEN 132
C + + D + IS EDD+L + + + D+ S +D + L+ G
Sbjct: 47 CFSLRGDFQARATLISGEDDLLSHTNGVEAQHDALSFGTLAADMAPLSSG---------- 96
Query: 131 FSINNDEPDLDSPTEGFSSISEAIEDIRQGKFVIVVDDEDREN 3
FS +NDE DLD P +GFSSI+EAIEDIRQGK VIVVDDEDREN
Sbjct: 97 FSSDNDEYDLDYPIQGFSSIAEAIEDIRQGKMVIVVDDEDREN 139
>ref|XP_004952849.1| PREDICTED: riboflavin biosynthesis protein ribBA,
chloroplastic-like isoform X2 [Setaria italica]
Length = 550
Score = 81.3 bits (199), Expect = 1e-13
Identities = 48/103 (46%), Positives = 69/103 (66%), Gaps = 4/103 (3%)
Frame = -2
Query: 299 KADSGFASLPISPEDDVLIQQSTIIE-KDDSTSNSKYPSDSSALAEGIS-DIAVIPENFS 126
K D G+ + S D+L+ +ST + +D ++S P+DS E +S ++A + + F+
Sbjct: 60 KRDGGYTAGGASGNGDMLLPRSTSVRGQDHPVADSVLPTDSMVAPEILSANLARVADKFT 119
Query: 125 INND--EPDLDSPTEGFSSISEAIEDIRQGKFVIVVDDEDREN 3
++ E DLDSPTEGF+SI++AIEDIRQGK VIVVDDE REN
Sbjct: 120 DDDTDTELDLDSPTEGFASIADAIEDIRQGKLVIVVDDESREN 162
>ref|XP_004952848.1| PREDICTED: riboflavin biosynthesis protein ribBA,
chloroplastic-like isoform X1 [Setaria italica]
Length = 595
Score = 81.3 bits (199), Expect = 1e-13
Identities = 48/103 (46%), Positives = 69/103 (66%), Gaps = 4/103 (3%)
Frame = -2
Query: 299 KADSGFASLPISPEDDVLIQQSTIIE-KDDSTSNSKYPSDSSALAEGIS-DIAVIPENFS 126
K D G+ + S D+L+ +ST + +D ++S P+DS E +S ++A + + F+
Sbjct: 105 KRDGGYTAGGASGNGDMLLPRSTSVRGQDHPVADSVLPTDSMVAPEILSANLARVADKFT 164
Query: 125 INND--EPDLDSPTEGFSSISEAIEDIRQGKFVIVVDDEDREN 3
++ E DLDSPTEGF+SI++AIEDIRQGK VIVVDDE REN
Sbjct: 165 DDDTDTELDLDSPTEGFASIADAIEDIRQGKLVIVVDDESREN 207
>ref|XP_006647406.1| PREDICTED: probable bifunctional riboflavin biosynthesis protein
RIBA 2, chloroplastic-like [Oryza brachyantha]
Length = 553
Score = 80.9 bits (198), Expect = 2e-13
Identities = 51/107 (47%), Positives = 71/107 (66%), Gaps = 5/107 (4%)
Frame = -2
Query: 308 AASKADSGFASLPISPEDDVLIQQSTIIE-KDDSTSNSKYPSDSSALAEGISDIAV--IP 138
A+ K D F S D+ L+ +ST + +D +T++S P+DS + E IS + + +
Sbjct: 57 ASLKRDGAFPGDGYSGNDNALVPKSTSVRGQDHTTADSILPTDSVIVPE-ISHVGLARVA 115
Query: 137 ENFSINND--EPDLDSPTEGFSSISEAIEDIRQGKFVIVVDDEDREN 3
+ FS ++ E DLD+PTEGFSSISEAI+DI+QGK VIVVDDE REN
Sbjct: 116 DMFSDEDEDTELDLDNPTEGFSSISEAIKDIQQGKLVIVVDDESREN 162
>ref|XP_004973726.1| PREDICTED: riboflavin biosynthesis protein ribBA,
chloroplastic-like [Setaria italica]
Length = 546
Score = 80.9 bits (198), Expect = 2e-13
Identities = 44/79 (55%), Positives = 58/79 (73%)
Frame = -2
Query: 239 QSTIIEKDDSTSNSKYPSDSSALAEGISDIAVIPENFSINNDEPDLDSPTEGFSSISEAI 60
++ II + SN+ +D+ AL +D+A + + FS ++DE DLD PTEGFSSI EAI
Sbjct: 67 ENVIINGKVNPSNA-VQADAVALGTIAADMAPVVDGFSADDDELDLDFPTEGFSSIPEAI 125
Query: 59 EDIRQGKFVIVVDDEDREN 3
EDIRQGK+VIVVDDE+REN
Sbjct: 126 EDIRQGKYVIVVDDENREN 144
>ref|XP_003574656.1| PREDICTED: riboflavin biosynthesis protein ribBA,
chloroplastic-like isoform 2 [Brachypodium distachyon]
Length = 538
Score = 80.5 bits (197), Expect = 2e-13
Identities = 39/62 (62%), Positives = 50/62 (80%)
Frame = -2
Query: 188 SDSSALAEGISDIAVIPENFSINNDEPDLDSPTEGFSSISEAIEDIRQGKFVIVVDDEDR 9
+D++A +D+A + + FS ++DE DLD PTEGFSSI EAI+DIRQGK+VIVVDDEDR
Sbjct: 75 ADAAAFGTIAADMAPVVDGFSADDDELDLDLPTEGFSSIPEAIDDIRQGKYVIVVDDEDR 134
Query: 8 EN 3
EN
Sbjct: 135 EN 136
>ref|XP_003574655.1| PREDICTED: riboflavin biosynthesis protein ribBA,
chloroplastic-like isoform 1 [Brachypodium distachyon]
Length = 557
Score = 80.5 bits (197), Expect = 2e-13
Identities = 39/62 (62%), Positives = 50/62 (80%)
Frame = -2
Query: 188 SDSSALAEGISDIAVIPENFSINNDEPDLDSPTEGFSSISEAIEDIRQGKFVIVVDDEDR 9
+D++A +D+A + + FS ++DE DLD PTEGFSSI EAI+DIRQGK+VIVVDDEDR
Sbjct: 94 ADAAAFGTIAADMAPVVDGFSADDDELDLDLPTEGFSSIPEAIDDIRQGKYVIVVDDEDR 153
Query: 8 EN 3
EN
Sbjct: 154 EN 155
>ref|NP_001159237.1| hypothetical protein [Zea mays] gi|223942917|gb|ACN25542.1| unknown
[Zea mays] gi|413937377|gb|AFW71928.1| hypothetical
protein ZEAMMB73_632085 [Zea mays]
Length = 554
Score = 80.1 bits (196), Expect = 3e-13
Identities = 49/103 (47%), Positives = 69/103 (66%), Gaps = 4/103 (3%)
Frame = -2
Query: 299 KADSGFASLPISPEDDVLIQQSTIIE-KDDSTSNSKYPSDSSALAEGIS-DIAVIPENFS 126
K D G+ + +S +DD L+ +ST I +D S ++ P DS E +S ++ + + F+
Sbjct: 60 KNDGGYPAGGVSWKDDTLLPKSTTIRGQDHSVADPVLPMDSMITPEILSANVERVIDMFA 119
Query: 125 INND--EPDLDSPTEGFSSISEAIEDIRQGKFVIVVDDEDREN 3
++ E DLDSPTEGF+SI+EAIEDI+QGK VIVVDDE REN
Sbjct: 120 DDDTDTELDLDSPTEGFTSIAEAIEDIQQGKLVIVVDDESREN 162