BLASTX nr result
ID: Zingiber25_contig00024471
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00024471
(263 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAA85451.1| S-locus protein 2 [Brassica rapa] 55 7e-06
ref|XP_006391412.1| hypothetical protein EUTSA_v10018911mg [Eutr... 55 7e-06
ref|XP_006391411.1| hypothetical protein EUTSA_v10018911mg [Eutr... 55 7e-06
ref|XP_006302582.1| hypothetical protein CARUB_v10020690mg [Caps... 55 7e-06
gb|AAC35489.1| clp protease [Arabidopsis thaliana] 55 7e-06
ref|NP_564880.1| ATP-dependent Clp protease proteolytic subunit ... 55 7e-06
ref|XP_002888528.1| hypothetical protein ARALYDRAFT_894344 [Arab... 55 7e-06
ref|XP_002532641.1| ATP-dependent Clp protease proteolytic subun... 55 7e-06
emb|CAB89185.1| ClpP [Brassica napus var. napus] 55 7e-06
emb|CAC80640.1| ClpP putative protein [Brassica napus] 55 7e-06
gb|AAK48955.1|AF370528_1 ATP-dependent Clp protease; nClpP3 [Ara... 55 7e-06
gb|AAL34333.1|L41144_1 ClpP [Brassica oleracea] 55 7e-06
>dbj|BAA85451.1| S-locus protein 2 [Brassica rapa]
Length = 311
Score = 55.5 bits (132), Expect = 7e-06
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +2
Query: 176 RMPSFEQLDTTNMLLRQRIVFLGSQVDTM 262
R+PSFE+LDTTNMLLRQRIVFLGSQVD M
Sbjct: 79 RLPSFEELDTTNMLLRQRIVFLGSQVDDM 107
>ref|XP_006391412.1| hypothetical protein EUTSA_v10018911mg [Eutrema salsugineum]
gi|557087846|gb|ESQ28698.1| hypothetical protein
EUTSA_v10018911mg [Eutrema salsugineum]
Length = 311
Score = 55.5 bits (132), Expect = 7e-06
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +2
Query: 176 RMPSFEQLDTTNMLLRQRIVFLGSQVDTM 262
R+PSFE+LDTTNMLLRQRIVFLGSQVD M
Sbjct: 79 RLPSFEELDTTNMLLRQRIVFLGSQVDDM 107
>ref|XP_006391411.1| hypothetical protein EUTSA_v10018911mg [Eutrema salsugineum]
gi|557087845|gb|ESQ28697.1| hypothetical protein
EUTSA_v10018911mg [Eutrema salsugineum]
Length = 242
Score = 55.5 bits (132), Expect = 7e-06
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +2
Query: 176 RMPSFEQLDTTNMLLRQRIVFLGSQVDTM 262
R+PSFE+LDTTNMLLRQRIVFLGSQVD M
Sbjct: 79 RLPSFEELDTTNMLLRQRIVFLGSQVDDM 107
>ref|XP_006302582.1| hypothetical protein CARUB_v10020690mg [Capsella rubella]
gi|482571292|gb|EOA35480.1| hypothetical protein
CARUB_v10020690mg [Capsella rubella]
Length = 311
Score = 55.5 bits (132), Expect = 7e-06
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +2
Query: 176 RMPSFEQLDTTNMLLRQRIVFLGSQVDTM 262
R+PSFE+LDTTNMLLRQRIVFLGSQVD M
Sbjct: 79 RLPSFEELDTTNMLLRQRIVFLGSQVDDM 107
>gb|AAC35489.1| clp protease [Arabidopsis thaliana]
Length = 310
Score = 55.5 bits (132), Expect = 7e-06
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +2
Query: 176 RMPSFEQLDTTNMLLRQRIVFLGSQVDTM 262
R+PSFE+LDTTNMLLRQRIVFLGSQVD M
Sbjct: 78 RLPSFEELDTTNMLLRQRIVFLGSQVDDM 106
>ref|NP_564880.1| ATP-dependent Clp protease proteolytic subunit 3 [Arabidopsis
thaliana] gi|75314059|sp|Q9SXJ6.1|CLPP3_ARATH RecName:
Full=ATP-dependent Clp protease proteolytic subunit 3,
chloroplastic; AltName: Full=Endopeptidase ClpP3;
Short=nClpP3; AltName: Full=nClpP4; Flags: Precursor
gi|12322291|gb|AAG51173.1|AC079285_6 ATP-dependent Clp
protease (nClpP3) [Arabidopsis thaliana]
gi|12597762|gb|AAG60075.1|AC013288_9 ATP-dependent Clp
protease (nClpP3) [Arabidopsis thaliana]
gi|5360591|dbj|BAA82067.1| nClpP3 [Arabidopsis thaliana]
gi|21592949|gb|AAM64899.1| ATP-dependent Clp protease
proteolytic subunit ClpP3 [Arabidopsis thaliana]
gi|332196422|gb|AEE34543.1| ATP-dependent Clp protease
proteolytic subunit 3 [Arabidopsis thaliana]
Length = 309
Score = 55.5 bits (132), Expect = 7e-06
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +2
Query: 176 RMPSFEQLDTTNMLLRQRIVFLGSQVDTM 262
R+PSFE+LDTTNMLLRQRIVFLGSQVD M
Sbjct: 77 RLPSFEELDTTNMLLRQRIVFLGSQVDDM 105
>ref|XP_002888528.1| hypothetical protein ARALYDRAFT_894344 [Arabidopsis lyrata subsp.
lyrata] gi|297334369|gb|EFH64787.1| hypothetical protein
ARALYDRAFT_894344 [Arabidopsis lyrata subsp. lyrata]
Length = 308
Score = 55.5 bits (132), Expect = 7e-06
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +2
Query: 176 RMPSFEQLDTTNMLLRQRIVFLGSQVDTM 262
R+PSFE+LDTTNMLLRQRIVFLGSQVD M
Sbjct: 76 RLPSFEELDTTNMLLRQRIVFLGSQVDDM 104
>ref|XP_002532641.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis] gi|223527632|gb|EEF29744.1| ATP-dependent Clp
protease proteolytic subunit, putative [Ricinus
communis]
Length = 334
Score = 55.5 bits (132), Expect = 7e-06
Identities = 32/65 (49%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Frame = +2
Query: 74 RSRRNLSVSAVSRRGRTLXXXXXXXXXXXXXAAFR--MPSFEQLDTTNMLLRQRIVFLGS 247
+ R+ +SV AV+ R TL A +P FE+LDTTNMLLRQRI+FLGS
Sbjct: 48 KRRKPISVKAVNTRKETLSSNWDVANFSSSFATSSPALPRFEELDTTNMLLRQRIIFLGS 107
Query: 248 QVDTM 262
QVD M
Sbjct: 108 QVDDM 112
>emb|CAB89185.1| ClpP [Brassica napus var. napus]
Length = 313
Score = 55.5 bits (132), Expect = 7e-06
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +2
Query: 176 RMPSFEQLDTTNMLLRQRIVFLGSQVDTM 262
R+PSFE+LDTTNMLLRQRIVFLGSQVD M
Sbjct: 81 RLPSFEELDTTNMLLRQRIVFLGSQVDDM 109
>emb|CAC80640.1| ClpP putative protein [Brassica napus]
Length = 313
Score = 55.5 bits (132), Expect = 7e-06
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +2
Query: 176 RMPSFEQLDTTNMLLRQRIVFLGSQVDTM 262
R+PSFE+LDTTNMLLRQRIVFLGSQVD M
Sbjct: 81 RLPSFEELDTTNMLLRQRIVFLGSQVDDM 109
>gb|AAK48955.1|AF370528_1 ATP-dependent Clp protease; nClpP3 [Arabidopsis thaliana]
gi|18377550|gb|AAL66941.1| ATP-dependent Clp protease
(nClpP3) [Arabidopsis thaliana]
Length = 309
Score = 55.5 bits (132), Expect = 7e-06
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +2
Query: 176 RMPSFEQLDTTNMLLRQRIVFLGSQVDTM 262
R+PSFE+LDTTNMLLRQRIVFLGSQVD M
Sbjct: 77 RLPSFEELDTTNMLLRQRIVFLGSQVDDM 105
>gb|AAL34333.1|L41144_1 ClpP [Brassica oleracea]
Length = 279
Score = 55.5 bits (132), Expect = 7e-06
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +2
Query: 176 RMPSFEQLDTTNMLLRQRIVFLGSQVDTM 262
R+PSFE+LDTTNMLLRQRIVFLGSQVD M
Sbjct: 47 RLPSFEELDTTNMLLRQRIVFLGSQVDDM 75