BLASTX nr result
ID: Zingiber25_contig00024470
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00024470
(266 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002532641.1| ATP-dependent Clp protease proteolytic subun... 68 1e-09
ref|XP_006302582.1| hypothetical protein CARUB_v10020690mg [Caps... 67 2e-09
ref|XP_002271649.1| PREDICTED: ATP-dependent Clp protease proteo... 67 2e-09
dbj|BAA85451.1| S-locus protein 2 [Brassica rapa] 67 3e-09
ref|XP_003567746.1| PREDICTED: ATP-dependent Clp protease proteo... 67 3e-09
gb|AAL34333.1|L41144_1 ClpP [Brassica oleracea] 66 4e-09
ref|XP_006644214.1| PREDICTED: ATP-dependent Clp protease proteo... 65 9e-09
ref|XP_004167647.1| PREDICTED: ATP-dependent Clp protease proteo... 65 9e-09
ref|XP_004149447.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependen... 65 9e-09
dbj|BAD73292.1| putative ATP-dependent Clp protease, proteolytic... 65 1e-08
ref|NP_001043155.1| Os01g0507900 [Oryza sativa Japonica Group] g... 65 1e-08
gb|AAC35489.1| clp protease [Arabidopsis thaliana] 64 2e-08
ref|NP_564880.1| ATP-dependent Clp protease proteolytic subunit ... 64 2e-08
emb|CAB89185.1| ClpP [Brassica napus var. napus] 64 2e-08
emb|CAC80640.1| ClpP putative protein [Brassica napus] 64 2e-08
gb|AAK48955.1|AF370528_1 ATP-dependent Clp protease; nClpP3 [Ara... 64 2e-08
ref|XP_002888528.1| hypothetical protein ARALYDRAFT_894344 [Arab... 64 3e-08
ref|XP_006391412.1| hypothetical protein EUTSA_v10018911mg [Eutr... 63 5e-08
ref|XP_006391411.1| hypothetical protein EUTSA_v10018911mg [Eutr... 63 5e-08
ref|XP_004232007.1| PREDICTED: ATP-dependent Clp protease proteo... 63 5e-08
>ref|XP_002532641.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis] gi|223527632|gb|EEF29744.1| ATP-dependent Clp
protease proteolytic subunit, putative [Ricinus
communis]
Length = 334
Score = 68.2 bits (165), Expect = 1e-09
Identities = 36/71 (50%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
Frame = +2
Query: 59 SVRPRIRSRRNLSVSAVSRRGRTLSEGWNLSGSNSGSAAFR--MPSFEQLDTTNMLLRQR 232
S+ + R+ +SV AV+ R TLS W+++ +S A +P FE+LDTTNMLLRQR
Sbjct: 42 SISTNGKRRKPISVKAVNTRKETLSSNWDVANFSSSFATSSPALPRFEELDTTNMLLRQR 101
Query: 233 IVFLGSQVDTM 265
I+FLGSQVD M
Sbjct: 102 IIFLGSQVDDM 112
>ref|XP_006302582.1| hypothetical protein CARUB_v10020690mg [Capsella rubella]
gi|482571292|gb|EOA35480.1| hypothetical protein
CARUB_v10020690mg [Capsella rubella]
Length = 311
Score = 67.4 bits (163), Expect = 2e-09
Identities = 40/67 (59%), Positives = 47/67 (70%), Gaps = 3/67 (4%)
Frame = +2
Query: 74 IRSRRNLSVSAVSRRGRTLSEGWNLSGSNSGSAA---FRMPSFEQLDTTNMLLRQRIVFL 244
+RS NLS R+ TLS W++SG + S A R+PSFE+LDTTNMLLRQRIVFL
Sbjct: 43 VRSSLNLSRPPPLRQ--TLSSNWDVSGFSVDSVAQSPSRLPSFEELDTTNMLLRQRIVFL 100
Query: 245 GSQVDTM 265
GSQVD M
Sbjct: 101 GSQVDDM 107
>ref|XP_002271649.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 3,
chloroplastic [Vitis vinifera]
Length = 320
Score = 67.0 bits (162), Expect = 2e-09
Identities = 41/79 (51%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +2
Query: 32 PRSSPCRSASVRPRIRSRRNLSVSAVSRRGR-TLSEGWNLSGSNSGSAAFRMPSFEQLDT 208
P SS S R R +S+ S R TL+ W+LS S SA +P FE LDT
Sbjct: 23 PSSSSLWLPSTSRSSRKGRAVSMVKASSASRPTLASNWDLSSLQSASAPTWLPRFEDLDT 82
Query: 209 TNMLLRQRIVFLGSQVDTM 265
TNMLLRQRIVFLGSQVD M
Sbjct: 83 TNMLLRQRIVFLGSQVDDM 101
>dbj|BAA85451.1| S-locus protein 2 [Brassica rapa]
Length = 311
Score = 66.6 bits (161), Expect = 3e-09
Identities = 40/67 (59%), Positives = 47/67 (70%), Gaps = 3/67 (4%)
Frame = +2
Query: 74 IRSRRNLSVSAVSRRGRTLSEGWNLSGSNSGSAA---FRMPSFEQLDTTNMLLRQRIVFL 244
+RS NLS S R +TLS W++S + S A R+PSFE+LDTTNMLLRQRIVFL
Sbjct: 44 VRSSMNLSGS---RPRQTLSSNWDVSKFSVDSVAQSPSRLPSFEELDTTNMLLRQRIVFL 100
Query: 245 GSQVDTM 265
GSQVD M
Sbjct: 101 GSQVDDM 107
>ref|XP_003567746.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 3,
chloroplastic-like [Brachypodium distachyon]
Length = 309
Score = 66.6 bits (161), Expect = 3e-09
Identities = 39/88 (44%), Positives = 50/88 (56%)
Frame = +2
Query: 2 CSLFSHGCLLPRSSPCRSASVRPRIRSRRNLSVSAVSRRGRTLSEGWNLSGSNSGSAAFR 181
CS LL ++ C + R R+ SA + RTLS GW+LSG ++ A R
Sbjct: 11 CSSSQSSVLLTPNTYCWKPAPRAAFRA------SAAAAARRTLSSGWDLSGLSAARPAAR 64
Query: 182 MPSFEQLDTTNMLLRQRIVFLGSQVDTM 265
E+LDT+NMLLRQRI+FLGS VD M
Sbjct: 65 KARLEELDTSNMLLRQRIIFLGSPVDDM 92
>gb|AAL34333.1|L41144_1 ClpP [Brassica oleracea]
Length = 279
Score = 66.2 bits (160), Expect = 4e-09
Identities = 39/67 (58%), Positives = 46/67 (68%), Gaps = 3/67 (4%)
Frame = +2
Query: 74 IRSRRNLSVSAVSRRGRTLSEGWNLSGSNSGSAA---FRMPSFEQLDTTNMLLRQRIVFL 244
+RS N+S R +TLS W+LS + S A R+PSFE+LDTTNMLLRQRIVFL
Sbjct: 10 VRSSMNMS-GPRPRPRQTLSSNWDLSNFSVDSVAQSPSRLPSFEELDTTNMLLRQRIVFL 68
Query: 245 GSQVDTM 265
GSQVD M
Sbjct: 69 GSQVDDM 75
>ref|XP_006644214.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 3,
chloroplastic-like [Oryza brachyantha]
Length = 315
Score = 65.1 bits (157), Expect = 9e-09
Identities = 38/79 (48%), Positives = 47/79 (59%)
Frame = +2
Query: 29 LPRSSPCRSASVRPRIRSRRNLSVSAVSRRGRTLSEGWNLSGSNSGSAAFRMPSFEQLDT 208
L +S C A+ R +R+ +V+ RTLS W L G ++ A R P E+LDT
Sbjct: 27 LAPNSCCWKAAPRATVRA-------SVAAAQRTLSSRWELPGPSAARPAARKPRLEELDT 79
Query: 209 TNMLLRQRIVFLGSQVDTM 265
TNMLLRQRIVFLGS VD M
Sbjct: 80 TNMLLRQRIVFLGSPVDDM 98
>ref|XP_004167647.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 3,
chloroplastic-like [Cucumis sativus]
Length = 339
Score = 65.1 bits (157), Expect = 9e-09
Identities = 36/67 (53%), Positives = 44/67 (65%), Gaps = 7/67 (10%)
Frame = +2
Query: 86 RNLSVSAVSRRG-------RTLSEGWNLSGSNSGSAAFRMPSFEQLDTTNMLLRQRIVFL 244
RN SV V+ RTLS W++ + S S+A +P FE+LDTTNMLLRQRI+FL
Sbjct: 50 RNCSVPVVNHPSHSSSSLRRTLSSNWDVFSNYSVSSARSLPRFEELDTTNMLLRQRIIFL 109
Query: 245 GSQVDTM 265
GSQVD M
Sbjct: 110 GSQVDDM 116
>ref|XP_004149447.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent Clp protease
proteolytic subunit 3, chloroplastic-like [Cucumis
sativus]
Length = 339
Score = 65.1 bits (157), Expect = 9e-09
Identities = 36/67 (53%), Positives = 44/67 (65%), Gaps = 7/67 (10%)
Frame = +2
Query: 86 RNLSVSAVSRRG-------RTLSEGWNLSGSNSGSAAFRMPSFEQLDTTNMLLRQRIVFL 244
RN SV V+ RTLS W++ + S S+A +P FE+LDTTNMLLRQRI+FL
Sbjct: 50 RNCSVPVVNHPSHSSSSLRRTLSSNWDVFSNYSVSSARSLPRFEELDTTNMLLRQRIIFL 109
Query: 245 GSQVDTM 265
GSQVD M
Sbjct: 110 GSQVDDM 116
>dbj|BAD73292.1| putative ATP-dependent Clp protease, proteolytic subunit [Oryza
sativa Japonica Group] gi|125526129|gb|EAY74243.1|
hypothetical protein OsI_02123 [Oryza sativa Indica
Group] gi|125570557|gb|EAZ12072.1| hypothetical protein
OsJ_01953 [Oryza sativa Japonica Group]
Length = 308
Score = 64.7 bits (156), Expect = 1e-08
Identities = 41/87 (47%), Positives = 50/87 (57%), Gaps = 11/87 (12%)
Frame = +2
Query: 38 SSPCRSAS------VRP-----RIRSRRNLSVSAVSRRGRTLSEGWNLSGSNSGSAAFRM 184
+SPC S+S + P + R + SA + R RTLS W L G ++ A R
Sbjct: 6 ASPCSSSSSPSSLFLAPNPCCWKAAPRATVRASASAAR-RTLSSAWELPGPSAARPAARK 64
Query: 185 PSFEQLDTTNMLLRQRIVFLGSQVDTM 265
P E+LDTTNMLLRQRIVFLGS VD M
Sbjct: 65 PRLEELDTTNMLLRQRIVFLGSPVDDM 91
>ref|NP_001043155.1| Os01g0507900 [Oryza sativa Japonica Group]
gi|113532686|dbj|BAF05069.1| Os01g0507900 [Oryza sativa
Japonica Group] gi|215734851|dbj|BAG95573.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 314
Score = 64.7 bits (156), Expect = 1e-08
Identities = 41/87 (47%), Positives = 50/87 (57%), Gaps = 11/87 (12%)
Frame = +2
Query: 38 SSPCRSAS------VRP-----RIRSRRNLSVSAVSRRGRTLSEGWNLSGSNSGSAAFRM 184
+SPC S+S + P + R + SA + R RTLS W L G ++ A R
Sbjct: 12 ASPCSSSSSPSSLFLAPNPCCWKAAPRATVRASASAAR-RTLSSAWELPGPSAARPAARK 70
Query: 185 PSFEQLDTTNMLLRQRIVFLGSQVDTM 265
P E+LDTTNMLLRQRIVFLGS VD M
Sbjct: 71 PRLEELDTTNMLLRQRIVFLGSPVDDM 97
>gb|AAC35489.1| clp protease [Arabidopsis thaliana]
Length = 310
Score = 64.3 bits (155), Expect = 2e-08
Identities = 37/64 (57%), Positives = 46/64 (71%), Gaps = 3/64 (4%)
Frame = +2
Query: 83 RRNLSVSAVSRRGRTLSEGWNLSGSNSGSAA---FRMPSFEQLDTTNMLLRQRIVFLGSQ 253
R ++S+S R+ TLS W++S + S A R+PSFE+LDTTNMLLRQRIVFLGSQ
Sbjct: 45 RSSMSLSKPPRQ--TLSSNWDVSSFSIDSVAQSPSRLPSFEELDTTNMLLRQRIVFLGSQ 102
Query: 254 VDTM 265
VD M
Sbjct: 103 VDDM 106
>ref|NP_564880.1| ATP-dependent Clp protease proteolytic subunit 3 [Arabidopsis
thaliana] gi|75314059|sp|Q9SXJ6.1|CLPP3_ARATH RecName:
Full=ATP-dependent Clp protease proteolytic subunit 3,
chloroplastic; AltName: Full=Endopeptidase ClpP3;
Short=nClpP3; AltName: Full=nClpP4; Flags: Precursor
gi|12322291|gb|AAG51173.1|AC079285_6 ATP-dependent Clp
protease (nClpP3) [Arabidopsis thaliana]
gi|12597762|gb|AAG60075.1|AC013288_9 ATP-dependent Clp
protease (nClpP3) [Arabidopsis thaliana]
gi|5360591|dbj|BAA82067.1| nClpP3 [Arabidopsis thaliana]
gi|21592949|gb|AAM64899.1| ATP-dependent Clp protease
proteolytic subunit ClpP3 [Arabidopsis thaliana]
gi|332196422|gb|AEE34543.1| ATP-dependent Clp protease
proteolytic subunit 3 [Arabidopsis thaliana]
Length = 309
Score = 64.3 bits (155), Expect = 2e-08
Identities = 37/64 (57%), Positives = 46/64 (71%), Gaps = 3/64 (4%)
Frame = +2
Query: 83 RRNLSVSAVSRRGRTLSEGWNLSGSNSGSAA---FRMPSFEQLDTTNMLLRQRIVFLGSQ 253
R ++S+S R+ TLS W++S + S A R+PSFE+LDTTNMLLRQRIVFLGSQ
Sbjct: 44 RSSMSLSKPPRQ--TLSSNWDVSSFSIDSVAQSPSRLPSFEELDTTNMLLRQRIVFLGSQ 101
Query: 254 VDTM 265
VD M
Sbjct: 102 VDDM 105
>emb|CAB89185.1| ClpP [Brassica napus var. napus]
Length = 313
Score = 64.3 bits (155), Expect = 2e-08
Identities = 39/67 (58%), Positives = 46/67 (68%), Gaps = 3/67 (4%)
Frame = +2
Query: 74 IRSRRNLSVSAVSRRGRTLSEGWNLSGSNSGSAA---FRMPSFEQLDTTNMLLRQRIVFL 244
+RS NLS R +TLS W++S + S A R+PSFE+LDTTNMLLRQRIVFL
Sbjct: 46 VRSSMNLSGP---RPRQTLSSDWDVSKFSVDSVAQSPSRLPSFEELDTTNMLLRQRIVFL 102
Query: 245 GSQVDTM 265
GSQVD M
Sbjct: 103 GSQVDDM 109
>emb|CAC80640.1| ClpP putative protein [Brassica napus]
Length = 313
Score = 64.3 bits (155), Expect = 2e-08
Identities = 39/67 (58%), Positives = 46/67 (68%), Gaps = 3/67 (4%)
Frame = +2
Query: 74 IRSRRNLSVSAVSRRGRTLSEGWNLSGSNSGSAA---FRMPSFEQLDTTNMLLRQRIVFL 244
+RS NLS R +TLS W++S + S A R+PSFE+LDTTNMLLRQRIVFL
Sbjct: 46 VRSSMNLSGP---RPRQTLSSDWDVSKFSVDSVAQSPSRLPSFEELDTTNMLLRQRIVFL 102
Query: 245 GSQVDTM 265
GSQVD M
Sbjct: 103 GSQVDDM 109
>gb|AAK48955.1|AF370528_1 ATP-dependent Clp protease; nClpP3 [Arabidopsis thaliana]
gi|18377550|gb|AAL66941.1| ATP-dependent Clp protease
(nClpP3) [Arabidopsis thaliana]
Length = 309
Score = 64.3 bits (155), Expect = 2e-08
Identities = 37/64 (57%), Positives = 46/64 (71%), Gaps = 3/64 (4%)
Frame = +2
Query: 83 RRNLSVSAVSRRGRTLSEGWNLSGSNSGSAA---FRMPSFEQLDTTNMLLRQRIVFLGSQ 253
R ++S+S R+ TLS W++S + S A R+PSFE+LDTTNMLLRQRIVFLGSQ
Sbjct: 44 RSSMSLSKPPRQ--TLSSNWDVSSFSIDSVAQSPSRLPSFEELDTTNMLLRQRIVFLGSQ 101
Query: 254 VDTM 265
VD M
Sbjct: 102 VDDM 105
>ref|XP_002888528.1| hypothetical protein ARALYDRAFT_894344 [Arabidopsis lyrata subsp.
lyrata] gi|297334369|gb|EFH64787.1| hypothetical protein
ARALYDRAFT_894344 [Arabidopsis lyrata subsp. lyrata]
Length = 308
Score = 63.5 bits (153), Expect = 3e-08
Identities = 34/55 (61%), Positives = 41/55 (74%), Gaps = 3/55 (5%)
Frame = +2
Query: 110 SRRGRTLSEGWNLSGSNSGSAA---FRMPSFEQLDTTNMLLRQRIVFLGSQVDTM 265
S+ +TLS W++S + S A R+PSFE+LDTTNMLLRQRIVFLGSQVD M
Sbjct: 50 SKPRQTLSSNWDVSSFSVDSVAQSPSRLPSFEELDTTNMLLRQRIVFLGSQVDDM 104
>ref|XP_006391412.1| hypothetical protein EUTSA_v10018911mg [Eutrema salsugineum]
gi|557087846|gb|ESQ28698.1| hypothetical protein
EUTSA_v10018911mg [Eutrema salsugineum]
Length = 311
Score = 62.8 bits (151), Expect = 5e-08
Identities = 38/67 (56%), Positives = 45/67 (67%), Gaps = 3/67 (4%)
Frame = +2
Query: 74 IRSRRNLSVSAVSRRGRTLSEGWNLSGSNSGSAA---FRMPSFEQLDTTNMLLRQRIVFL 244
+RS NLS +TLS W++S + S A R+PSFE+LDTTNMLLRQRIVFL
Sbjct: 46 VRSSINLSGPR-----QTLSSNWDVSSFSVDSLAQSPSRLPSFEELDTTNMLLRQRIVFL 100
Query: 245 GSQVDTM 265
GSQVD M
Sbjct: 101 GSQVDDM 107
>ref|XP_006391411.1| hypothetical protein EUTSA_v10018911mg [Eutrema salsugineum]
gi|557087845|gb|ESQ28697.1| hypothetical protein
EUTSA_v10018911mg [Eutrema salsugineum]
Length = 242
Score = 62.8 bits (151), Expect = 5e-08
Identities = 38/67 (56%), Positives = 45/67 (67%), Gaps = 3/67 (4%)
Frame = +2
Query: 74 IRSRRNLSVSAVSRRGRTLSEGWNLSGSNSGSAA---FRMPSFEQLDTTNMLLRQRIVFL 244
+RS NLS +TLS W++S + S A R+PSFE+LDTTNMLLRQRIVFL
Sbjct: 46 VRSSINLSGPR-----QTLSSNWDVSSFSVDSLAQSPSRLPSFEELDTTNMLLRQRIVFL 100
Query: 245 GSQVDTM 265
GSQVD M
Sbjct: 101 GSQVDDM 107
>ref|XP_004232007.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 3,
chloroplastic-like [Solanum lycopersicum]
Length = 309
Score = 62.8 bits (151), Expect = 5e-08
Identities = 44/93 (47%), Positives = 52/93 (55%), Gaps = 7/93 (7%)
Frame = +2
Query: 2 CSLFSHGCLLPRSSPC---RSASVRP----RIRSRRNLSVSAVSRRGRTLSEGWNLSGSN 160
C FS R S C S V+ I RR LSV A + + TLS W++S +
Sbjct: 5 CLTFSTALAPARPSTCLHYNSTFVKQFQTNTITPRRGLSVKASTHKP-TLSTNWDVSSYS 63
Query: 161 SGSAAFRMPSFEQLDTTNMLLRQRIVFLGSQVD 259
A MP FE+LDTTNMLLRQRI+FLGSQVD
Sbjct: 64 KAPAW--MPRFEELDTTNMLLRQRIIFLGSQVD 94