BLASTX nr result
ID: Zingiber25_contig00024448
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00024448
(578 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002270570.2| PREDICTED: E3 ubiquitin-protein ligase RHF2A... 79 8e-13
gb|EOY33234.1| RING-H2 group F2A isoform 2 [Theobroma cacao] 77 4e-12
gb|EOY33233.1| RING-H2 group F2A isoform 1 [Theobroma cacao] 77 4e-12
gb|ACF84725.1| unknown [Zea mays] gi|195619558|gb|ACG31609.1| zi... 76 7e-12
ref|NP_001130764.1| uncharacterized protein LOC100191868 [Zea ma... 76 7e-12
gb|ESW21993.1| hypothetical protein PHAVU_005G117400g [Phaseolus... 75 9e-12
gb|EMS61348.1| hypothetical protein TRIUR3_28356 [Triticum urartu] 75 1e-11
ref|XP_004139068.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A... 75 1e-11
gb|ABA94393.1| RING-H2 finger protein RHF2a, putative, expressed... 75 2e-11
gb|ABA94392.2| RING-H2 finger protein RHF2a, putative, expressed... 75 2e-11
gb|ABA94394.2| RING-H2 finger protein RHF2a, putative, expressed... 75 2e-11
gb|EEC68392.1| hypothetical protein OsI_36548 [Oryza sativa Indi... 74 2e-11
ref|XP_006662973.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A... 74 3e-11
ref|XP_003543397.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A... 74 4e-11
gb|AAP85546.1| putative RING-H2 zinc finger protein [Oryza sativ... 74 4e-11
dbj|BAK02649.1| predicted protein [Hordeum vulgare subsp. vulgare] 72 8e-11
ref|XP_006487825.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A... 72 1e-10
ref|XP_006424050.1| hypothetical protein CICLE_v10030283mg [Citr... 72 1e-10
ref|XP_002524095.1| protein binding protein, putative [Ricinus c... 72 1e-10
ref|XP_003596933.1| RING finger protein [Medicago truncatula] gi... 71 2e-10
>ref|XP_002270570.2| PREDICTED: E3 ubiquitin-protein ligase RHF2A-like [Vitis vinifera]
Length = 387
Score = 79.0 bits (193), Expect = 8e-13
Identities = 40/72 (55%), Positives = 51/72 (70%)
Frame = +1
Query: 1 GWRERLLSRSGSMADIGSGVRREVRAGIATVTRMMERLDTREGRTSSTSAPPSAEVDAVM 180
GW+ERL SR+ SMAD+GS VRREV AGIA+V+RMMERLDTRE + ++ S D+V
Sbjct: 296 GWKERLFSRNNSMADLGSEVRREVNAGIASVSRMMERLDTRENNGAGQASVSSHLADSVT 355
Query: 181 EPSNADNMDLNA 216
E SN + + A
Sbjct: 356 EQSNQNERETRA 367
>gb|EOY33234.1| RING-H2 group F2A isoform 2 [Theobroma cacao]
Length = 385
Score = 76.6 bits (187), Expect = 4e-12
Identities = 39/64 (60%), Positives = 48/64 (75%)
Frame = +1
Query: 1 GWRERLLSRSGSMADIGSGVRREVRAGIATVTRMMERLDTREGRTSSTSAPPSAEVDAVM 180
GW+ER SR+ SMADIGS VRREV AGIATV+RMMERL+TR+ RTS+++ S E +
Sbjct: 294 GWKERFFSRNTSMADIGSEVRREVNAGIATVSRMMERLETRDNRTSTSTVSSSLEDRSDT 353
Query: 181 EPSN 192
E N
Sbjct: 354 ESDN 357
>gb|EOY33233.1| RING-H2 group F2A isoform 1 [Theobroma cacao]
Length = 388
Score = 76.6 bits (187), Expect = 4e-12
Identities = 39/64 (60%), Positives = 48/64 (75%)
Frame = +1
Query: 1 GWRERLLSRSGSMADIGSGVRREVRAGIATVTRMMERLDTREGRTSSTSAPPSAEVDAVM 180
GW+ER SR+ SMADIGS VRREV AGIATV+RMMERL+TR+ RTS+++ S E +
Sbjct: 297 GWKERFFSRNTSMADIGSEVRREVNAGIATVSRMMERLETRDNRTSTSTVSSSLEDRSDT 356
Query: 181 EPSN 192
E N
Sbjct: 357 ESDN 360
>gb|ACF84725.1| unknown [Zea mays] gi|195619558|gb|ACG31609.1| zinc finger,
RING-type [Zea mays] gi|238010776|gb|ACR36423.1| unknown
[Zea mays] gi|413925335|gb|AFW65267.1| putative RING
zinc finger domain superfamily protein isoform 1 [Zea
mays] gi|413925336|gb|AFW65268.1| putative RING zinc
finger domain superfamily protein isoform 2 [Zea mays]
gi|413925337|gb|AFW65269.1| putative RING zinc finger
domain superfamily protein isoform 3 [Zea mays]
Length = 396
Score = 75.9 bits (185), Expect = 7e-12
Identities = 41/80 (51%), Positives = 54/80 (67%), Gaps = 1/80 (1%)
Frame = +1
Query: 1 GWRERLLSRSGSMADIGSGVRREVRAGIATVTRMMERLDTR-EGRTSSTSAPPSAEVDAV 177
GW+ERL SR+ S+AD+GS VRREV AGIA+V+RMMERL+TR RTS + A ++EV +
Sbjct: 294 GWKERLFSRNSSVADLGSEVRREVNAGIASVSRMMERLETRGNSRTSDSPAASTSEVPSA 353
Query: 178 MEPSNADNMDLNANRVGTHG 237
E SN + N+ G
Sbjct: 354 TESSNERVTESNSAAAAAGG 373
>ref|NP_001130764.1| uncharacterized protein LOC100191868 [Zea mays]
gi|194690054|gb|ACF79111.1| unknown [Zea mays]
Length = 396
Score = 75.9 bits (185), Expect = 7e-12
Identities = 41/80 (51%), Positives = 54/80 (67%), Gaps = 1/80 (1%)
Frame = +1
Query: 1 GWRERLLSRSGSMADIGSGVRREVRAGIATVTRMMERLDTR-EGRTSSTSAPPSAEVDAV 177
GW+ERL SR+ S+AD+GS VRREV AGIA+V+RMMERL+TR RTS + A ++EV +
Sbjct: 294 GWKERLFSRNSSVADLGSEVRREVNAGIASVSRMMERLETRGNSRTSDSPAASTSEVPSA 353
Query: 178 MEPSNADNMDLNANRVGTHG 237
E SN + N+ G
Sbjct: 354 TESSNERVTESNSAAAAAGG 373
>gb|ESW21993.1| hypothetical protein PHAVU_005G117400g [Phaseolus vulgaris]
Length = 390
Score = 75.5 bits (184), Expect = 9e-12
Identities = 38/65 (58%), Positives = 51/65 (78%), Gaps = 1/65 (1%)
Frame = +1
Query: 1 GWRERLLSRSGSMADIGSGVRREVRAGIATVTRMMERLDTREG-RTSSTSAPPSAEVDAV 177
GW+ER SR+ +M+DIGS VRREV AGIATV+RMMERL+TR+ R++S SAP + E +V
Sbjct: 298 GWKERWFSRNNAMSDIGSDVRREVNAGIATVSRMMERLETRDSIRSNSNSAPSNLEDGSV 357
Query: 178 MEPSN 192
P++
Sbjct: 358 QAPND 362
>gb|EMS61348.1| hypothetical protein TRIUR3_28356 [Triticum urartu]
Length = 246
Score = 75.1 bits (183), Expect = 1e-11
Identities = 40/81 (49%), Positives = 54/81 (66%), Gaps = 1/81 (1%)
Frame = +1
Query: 1 GWRERLLSRSGSMADIGSGVRREVRAGIATVTRMMERLDTR-EGRTSSTSAPPSAEVDAV 177
GW+ERL SR+ S++D+GS VRREV GIA+V+RMMERL+TR GR S + ++EV
Sbjct: 154 GWKERLFSRNSSVSDLGSEVRREVNNGIASVSRMMERLETRGSGRPSYSPTTSTSEVCLT 213
Query: 178 MEPSNADNMDLNANRVGTHGN 240
EPSN + N+N + N
Sbjct: 214 TEPSNERVTESNSNTTASTSN 234
>ref|XP_004139068.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A-like [Cucumis sativus]
Length = 389
Score = 75.1 bits (183), Expect = 1e-11
Identities = 40/73 (54%), Positives = 52/73 (71%)
Frame = +1
Query: 1 GWRERLLSRSGSMADIGSGVRREVRAGIATVTRMMERLDTREGRTSSTSAPPSAEVDAVM 180
GW+E+L SR+ SM+DIGS VRREV AGIATV+RMMERL+TR+ R S S+P S+ V
Sbjct: 297 GWKEKLFSRNTSMSDIGSEVRREVNAGIATVSRMMERLETRDARKS--SSPESSSVGGNS 354
Query: 181 EPSNADNMDLNAN 219
S ++N + N
Sbjct: 355 PVSESNNRSMPEN 367
>gb|ABA94393.1| RING-H2 finger protein RHF2a, putative, expressed [Oryza sativa
Japonica Group]
Length = 370
Score = 74.7 bits (182), Expect = 2e-11
Identities = 47/96 (48%), Positives = 57/96 (59%), Gaps = 3/96 (3%)
Frame = +1
Query: 1 GWRERLLSRSGSMADIGSGVRREVRAGIATVTRMMERLDTR--EGRTSSTSAPPSAEVDA 174
GW+ERL SR S+AD+GS VRREV AGIA+V+RMMERL+TR GRTS A ++EV
Sbjct: 273 GWKERLFSRHSSVADLGSEVRREVNAGIASVSRMMERLETRGSNGRTSDGPAISTSEVIP 332
Query: 175 VMEPSNADNMDLNANRVGT-HGNXXXXXXHWVATSG 279
E SN + N T GN V T+G
Sbjct: 333 STESSNERVTENNPTTAATSSGNTSASSAPCVTTTG 368
>gb|ABA94392.2| RING-H2 finger protein RHF2a, putative, expressed [Oryza sativa
Japonica Group] gi|222616175|gb|EEE52307.1| hypothetical
protein OsJ_34320 [Oryza sativa Japonica Group]
Length = 394
Score = 74.7 bits (182), Expect = 2e-11
Identities = 47/96 (48%), Positives = 57/96 (59%), Gaps = 3/96 (3%)
Frame = +1
Query: 1 GWRERLLSRSGSMADIGSGVRREVRAGIATVTRMMERLDTR--EGRTSSTSAPPSAEVDA 174
GW+ERL SR S+AD+GS VRREV AGIA+V+RMMERL+TR GRTS A ++EV
Sbjct: 297 GWKERLFSRHSSVADLGSEVRREVNAGIASVSRMMERLETRGSNGRTSDGPAISTSEVIP 356
Query: 175 VMEPSNADNMDLNANRVGT-HGNXXXXXXHWVATSG 279
E SN + N T GN V T+G
Sbjct: 357 STESSNERVTENNPTTAATSSGNTSASSAPCVTTTG 392
>gb|ABA94394.2| RING-H2 finger protein RHF2a, putative, expressed [Oryza sativa
Japonica Group]
Length = 332
Score = 74.7 bits (182), Expect = 2e-11
Identities = 47/96 (48%), Positives = 57/96 (59%), Gaps = 3/96 (3%)
Frame = +1
Query: 1 GWRERLLSRSGSMADIGSGVRREVRAGIATVTRMMERLDTR--EGRTSSTSAPPSAEVDA 174
GW+ERL SR S+AD+GS VRREV AGIA+V+RMMERL+TR GRTS A ++EV
Sbjct: 235 GWKERLFSRHSSVADLGSEVRREVNAGIASVSRMMERLETRGSNGRTSDGPAISTSEVIP 294
Query: 175 VMEPSNADNMDLNANRVGT-HGNXXXXXXHWVATSG 279
E SN + N T GN V T+G
Sbjct: 295 STESSNERVTENNPTTAATSSGNTSASSAPCVTTTG 330
>gb|EEC68392.1| hypothetical protein OsI_36548 [Oryza sativa Indica Group]
Length = 444
Score = 74.3 bits (181), Expect = 2e-11
Identities = 43/90 (47%), Positives = 53/90 (58%), Gaps = 3/90 (3%)
Frame = +1
Query: 1 GWRERLLSRSGSMADIGSGVRREVRAGIATVTRMMERLDTR---EGRTSSTSAPPSAEVD 171
GW+ERL SR+ S+AD+GS VRREV AGIA+V+RMMERL+TR GRTS A ++EV
Sbjct: 327 GWKERLFSRNSSVADLGSEVRREVNAGIASVSRMMERLETRGSNNGRTSDGPATSTSEVI 386
Query: 172 AVMEPSNADNMDLNANRVGTHGNXXXXXXH 261
E SN + N T H
Sbjct: 387 PSTESSNERVTENNPTTAATSSERRPAHSH 416
>ref|XP_006662973.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A-like isoform X1 [Oryza
brachyantha] gi|573961631|ref|XP_006662974.1| PREDICTED:
E3 ubiquitin-protein ligase RHF2A-like isoform X2 [Oryza
brachyantha]
Length = 390
Score = 73.9 bits (180), Expect = 3e-11
Identities = 42/93 (45%), Positives = 53/93 (56%)
Frame = +1
Query: 1 GWRERLLSRSGSMADIGSGVRREVRAGIATVTRMMERLDTREGRTSSTSAPPSAEVDAVM 180
GW+ERL SR+ S+AD+GS VRREV AGIA+V+RMMERL+TR G S TS P+
Sbjct: 297 GWKERLFSRNSSVADLGSEVRREVNAGIASVSRMMERLETR-GNNSRTSDGPATSASEAR 355
Query: 181 EPSNADNMDLNANRVGTHGNXXXXXXHWVATSG 279
+ + N + N T V TSG
Sbjct: 356 PSTESSNERVTENNSTTAATSTSNTSPCVTTSG 388
>ref|XP_003543397.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A-like [Glycine max]
Length = 398
Score = 73.6 bits (179), Expect = 4e-11
Identities = 35/64 (54%), Positives = 49/64 (76%)
Frame = +1
Query: 1 GWRERLLSRSGSMADIGSGVRREVRAGIATVTRMMERLDTREGRTSSTSAPPSAEVDAVM 180
GW+ER SR+ +M+D+GS VRREV AGIATV+RMMERL+TR+ S++++ PS D +
Sbjct: 305 GWKERWFSRNNTMSDLGSEVRREVNAGIATVSRMMERLETRDNNRSNSNSAPSNIEDGSV 364
Query: 181 EPSN 192
+ SN
Sbjct: 365 QGSN 368
>gb|AAP85546.1| putative RING-H2 zinc finger protein [Oryza sativa Japonica Group]
Length = 394
Score = 73.6 bits (179), Expect = 4e-11
Identities = 42/79 (53%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Frame = +1
Query: 1 GWRERLLSRSGSMADIGSGVRREVRAGIATVTRMMERLDTR--EGRTSSTSAPPSAEVDA 174
GW+ERL SR+ S+AD+GS VRREV AGIA+V+RMMERL+TR GRTS A ++EV
Sbjct: 297 GWKERLFSRNSSVADLGSEVRREVNAGIASVSRMMERLETRGSNGRTSDGPAISTSEVIP 356
Query: 175 VMEPSNADNMDLNANRVGT 231
E SN + N T
Sbjct: 357 STESSNERVTENNPTTAAT 375
>dbj|BAK02649.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 438
Score = 72.4 bits (176), Expect = 8e-11
Identities = 38/65 (58%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Frame = +1
Query: 1 GWRERLLSRSGSMADIGSGVRREVRAGIATVTRMMERLDTR-EGRTSSTSAPPSAEVDAV 177
GW+ERL SRS S++D+GS VRREV GIA+V+RMMERL+TR GR S + ++EV
Sbjct: 345 GWKERLFSRSSSVSDLGSEVRREVNNGIASVSRMMERLETRGSGRPSYSPTTSASEVCPT 404
Query: 178 MEPSN 192
EPSN
Sbjct: 405 TEPSN 409
>ref|XP_006487825.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A-like [Citrus sinensis]
Length = 386
Score = 72.0 bits (175), Expect = 1e-10
Identities = 33/64 (51%), Positives = 51/64 (79%)
Frame = +1
Query: 1 GWRERLLSRSGSMADIGSGVRREVRAGIATVTRMMERLDTREGRTSSTSAPPSAEVDAVM 180
GW+ER SR+ +MAD+G+ VRREV AGI+TV+RMMERL+TR+ +++T++ S+ ++V
Sbjct: 295 GWKERFFSRNNTMADLGTEVRREVNAGISTVSRMMERLETRDSNSNNTTSVSSSSNNSVP 354
Query: 181 EPSN 192
E +N
Sbjct: 355 ELNN 358
>ref|XP_006424050.1| hypothetical protein CICLE_v10030283mg [Citrus clementina]
gi|557525984|gb|ESR37290.1| hypothetical protein
CICLE_v10030283mg [Citrus clementina]
Length = 386
Score = 72.0 bits (175), Expect = 1e-10
Identities = 33/64 (51%), Positives = 51/64 (79%)
Frame = +1
Query: 1 GWRERLLSRSGSMADIGSGVRREVRAGIATVTRMMERLDTREGRTSSTSAPPSAEVDAVM 180
GW+ER SR+ +MAD+G+ VRREV AGI+TV+RMMERL+TR+ +++T++ S+ ++V
Sbjct: 295 GWKERFFSRNNTMADLGTEVRREVNAGISTVSRMMERLETRDSNSNNTTSVSSSSNNSVP 354
Query: 181 EPSN 192
E +N
Sbjct: 355 ELNN 358
>ref|XP_002524095.1| protein binding protein, putative [Ricinus communis]
gi|223536663|gb|EEF38305.1| protein binding protein,
putative [Ricinus communis]
Length = 378
Score = 72.0 bits (175), Expect = 1e-10
Identities = 36/69 (52%), Positives = 51/69 (73%)
Frame = +1
Query: 1 GWRERLLSRSGSMADIGSGVRREVRAGIATVTRMMERLDTREGRTSSTSAPPSAEVDAVM 180
GW+ERL SR+ SM+DIGS VRREV AGI +V+RMMERL+TR+ T++ + + +V
Sbjct: 287 GWKERLFSRNSSMSDIGSEVRREVNAGITSVSRMMERLETRDNSTANHVSVSTQTDYSVA 346
Query: 181 EPSNADNMD 207
E SN +N++
Sbjct: 347 ERSNQNNVN 355
>ref|XP_003596933.1| RING finger protein [Medicago truncatula]
gi|355485981|gb|AES67184.1| RING finger protein
[Medicago truncatula]
Length = 382
Score = 71.2 bits (173), Expect = 2e-10
Identities = 34/68 (50%), Positives = 48/68 (70%)
Frame = +1
Query: 1 GWRERLLSRSGSMADIGSGVRREVRAGIATVTRMMERLDTREGRTSSTSAPPSAEVDAVM 180
GW+ER SR+ M+D+GS V+REV AGIATV+RMMERL+TR+ SS+ PS D +
Sbjct: 290 GWKERWFSRTSPMSDLGSEVKREVNAGIATVSRMMERLETRDNNRSSSDTAPSNLADGPI 349
Query: 181 EPSNADNM 204
+ S+ ++
Sbjct: 350 QGSSDQHL 357