BLASTX nr result

ID: Zingiber25_contig00024329 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00024329
         (473 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK55449.1|AC069300_4 putative transcription factor [Oryza sa...    59   7e-07
gb|EAZ16946.1| hypothetical protein OsJ_32427 [Oryza sativa Japo...    59   7e-07
ref|XP_002464939.1| hypothetical protein SORBIDRAFT_01g029170 [S...    57   3e-06
ref|XP_006662592.1| PREDICTED: GATA transcription factor 2-like ...    56   4e-06
ref|XP_004983678.1| PREDICTED: GATA transcription factor 2-like ...    55   7e-06
tpg|DAA51825.1| TPA: putative GATA transcription factor family p...    55   1e-05

>gb|AAK55449.1|AC069300_4 putative transcription factor [Oryza sativa Japonica Group]
           gi|31433473|gb|AAP54978.1| GATA zinc finger family
           protein, expressed [Oryza sativa Japonica Group]
           gi|125532920|gb|EAY79485.1| hypothetical protein
           OsI_34613 [Oryza sativa Indica Group]
          Length = 387

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 36/96 (37%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
 Frame = +1

Query: 172 LPISDTPAVDDFFPSSFNAATEVQFYSTTSSNHSFADNFQPFSGETTNSSLDFQSNYSPF 351
           L +S+TP   DFFP+S  AA           +H      +P     + +S D Q++   F
Sbjct: 74  LDLSNTPGAHDFFPASAAAAAAGDHGH--HHHHHIGGMGEPSGATPSATSSDHQTSMLSF 131

Query: 352 --NFHIPFEEEAELAWLSQFVEDSFSDVP-YPYTCH 450
             +F+IP E+ AEL WLS+FV+DS+SD+P Y  + H
Sbjct: 132 ADDFYIPTEDAAELEWLSKFVDDSYSDMPNYQSSAH 167


>gb|EAZ16946.1| hypothetical protein OsJ_32427 [Oryza sativa Japonica Group]
          Length = 388

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 36/96 (37%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
 Frame = +1

Query: 172 LPISDTPAVDDFFPSSFNAATEVQFYSTTSSNHSFADNFQPFSGETTNSSLDFQSNYSPF 351
           L +S+TP   DFFP+S  AA           +H      +P     + +S D Q++   F
Sbjct: 74  LDLSNTPGAHDFFPASAAAAAAGDHGH--HHHHHIGGMGEPSGATPSATSSDHQTSMLSF 131

Query: 352 --NFHIPFEEEAELAWLSQFVEDSFSDVP-YPYTCH 450
             +F+IP E+ AEL WLS+FV+DS+SD+P Y  + H
Sbjct: 132 ADDFYIPTEDAAELEWLSKFVDDSYSDMPNYQSSAH 167


>ref|XP_002464939.1| hypothetical protein SORBIDRAFT_01g029170 [Sorghum bicolor]
           gi|241918793|gb|EER91937.1| hypothetical protein
           SORBIDRAFT_01g029170 [Sorghum bicolor]
          Length = 384

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 51/152 (33%), Positives = 65/152 (42%), Gaps = 22/152 (14%)
 Frame = +1

Query: 43  MVREWESTTPGMDFA-GMG-------DSYSVAPSAGVTPVEDDASPPY-----LYGLPI- 180
           M  EWE    G++   GMG        S + AP +         S P+      YG+P  
Sbjct: 1   MASEWEMAAMGVELGMGMGTYHHHNASSITTAPMSSHHSGAASYSTPHHHHHHYYGMPPM 60

Query: 181 -SDTPAVDDFFPSSFNAATEVQ-FYST----TSSNHSFADNFQPFSGETTNSSLDFQSNY 342
             D   VDD    S  A      F+ T    T   H            T NSS D Q++ 
Sbjct: 61  GGDAMRVDDLLDLSTGAGAGAHDFFPTAAAATDKGHQHHSGAMGEPSPTANSS-DHQTSL 119

Query: 343 SPF--NFHIPFEEEAELAWLSQFVEDSFSDVP 432
             F   F+IP EE AEL WLS+FV+DS+SD+P
Sbjct: 120 LSFADEFYIPSEEAAELEWLSKFVDDSYSDMP 151


>ref|XP_006662592.1| PREDICTED: GATA transcription factor 2-like [Oryza brachyantha]
          Length = 228

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 42/119 (35%), Positives = 60/119 (50%), Gaps = 3/119 (2%)
 Frame = +1

Query: 103 YSVAPSAGVTPVEDDASPPYLYGLPISDTPAVDDFFPSSFNAATEVQFYSTTSSNHSFAD 282
           Y + PS G     D+        L +S+TP   DFFP++  AA           +H    
Sbjct: 53  YGMPPSTGDAMRVDEL-------LDLSNTPGAHDFFPAASAAAGGK---GHNGHHHHHIG 102

Query: 283 NFQPFSGETTNSSLDFQSNYSPF--NFHIPFEEEAELAWLSQFVEDSFSDVP-YPYTCH 450
                SG T++   D Q++   F  +F+IP EE AEL WLS+FV+DS+SD+P Y  + H
Sbjct: 103 AMGEPSGATSS---DHQTSMLSFADDFYIPTEEAAELEWLSKFVDDSYSDLPNYQSSAH 158


>ref|XP_004983678.1| PREDICTED: GATA transcription factor 2-like [Setaria italica]
          Length = 367

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 50/135 (37%), Positives = 68/135 (50%), Gaps = 5/135 (3%)
 Frame = +1

Query: 61  STTPGMDFAGMGDSYSVAPSA---GVTPVEDDASPPYLYGLPISDTPAVDDFFPSSFNAA 231
           +T P       G SYS A      G+ P+ D      L  L +S      DFFP++  AA
Sbjct: 30  TTAPMSSHHSGGASYSTAHHHHYYGMPPMGDAMRVDEL--LDLSTGAGAHDFFPTAAGAA 87

Query: 232 TEVQFYSTTSSNHSFADNFQPFSGETTNSSLDFQSNYSPF--NFHIPFEEEAELAWLSQF 405
                 +  + +HS A   +P    T NSS D Q++   F   F+IP EE AEL WLS+F
Sbjct: 88  ------AADNGHHSGAMG-EP--SPTANSS-DHQTSLLSFADEFYIPSEEAAELEWLSKF 137

Query: 406 VEDSFSDVPYPYTCH 450
           V+DS+SD+P  Y+ H
Sbjct: 138 VDDSYSDMP-NYSSH 151


>tpg|DAA51825.1| TPA: putative GATA transcription factor family protein [Zea mays]
          Length = 372

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 46/162 (28%), Positives = 69/162 (42%), Gaps = 32/162 (19%)
 Frame = +1

Query: 43  MVREWESTTPGMDFA-GMGDSY-------SVAPSA------------------GVTPVED 144
           M  EWE    G++   GMG +Y       + AP++                  G+ PV  
Sbjct: 1   MASEWEMAAMGVELGMGMGGTYHHNASSITTAPTSSHHSGGAGYSAAHHHHYYGMPPVGG 60

Query: 145 DASP----PYLYGLPISDTPAVDDFFPSSFNAATEVQFYSTTSSNHSFADNFQPFSGETT 312
           DA+       L  L +S      +FFP++          +  +  H  +          T
Sbjct: 61  DATAMRVDDLLENLDLSTGAGAHEFFPTA----------AAANKGHHHSGGAMVGEPSPT 110

Query: 313 NSSLDFQSNYSPF--NFHIPFEEEAELAWLSQFVEDSFSDVP 432
            +S D Q++   F   F+IP EE AEL WLS+FV+DS+SD+P
Sbjct: 111 ANSSDHQTSLLSFADEFYIPSEEAAELEWLSKFVDDSYSDMP 152


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