BLASTX nr result
ID: Zingiber25_contig00024273
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00024273
(885 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY25166.1| RNA-binding family protein isoform 1 [Theobroma c... 80 1e-12
gb|EOY25167.1| RNA-binding (RRM/RBD/RNP motifs) family protein i... 77 7e-12
gb|EOY01343.1| RNA-binding family protein isoform 3, partial [Th... 77 7e-12
gb|EOY01342.1| RNA-binding family protein isoform 2 [Theobroma c... 77 7e-12
gb|EOY01341.1| RNA-binding family protein isoform 1 [Theobroma c... 77 7e-12
ref|NP_001051073.1| Os03g0713600 [Oryza sativa Japonica Group] g... 77 9e-12
gb|EXB53844.1| Protein vip1 [Morus notabilis] 77 1e-11
ref|XP_002326541.1| predicted protein [Populus trichocarpa] 77 1e-11
ref|XP_006826576.1| hypothetical protein AMTR_s00138p00027500 [A... 76 1e-11
gb|EAY91637.1| hypothetical protein OsI_13273 [Oryza sativa Indi... 76 1e-11
ref|XP_006650496.1| PREDICTED: protein vip1-like [Oryza brachyan... 76 2e-11
ref|XP_004142266.1| PREDICTED: protein vip1-like [Cucumis sativu... 76 2e-11
ref|XP_002314770.2| hypothetical protein POPTR_0010s11420g [Popu... 75 2e-11
gb|EMT19305.1| Protein vip1 [Aegilops tauschii] 75 2e-11
gb|AFK43849.1| unknown [Lotus japonicus] 75 2e-11
ref|XP_006352893.1| PREDICTED: protein vip1-like [Solanum tubero... 75 3e-11
ref|XP_004245956.1| PREDICTED: protein vip1-like isoform 1 [Sola... 75 3e-11
dbj|BAC42423.1| unknown protein [Arabidopsis thaliana] 75 4e-11
ref|XP_002297716.2| hypothetical protein POPTR_0001s02090g [Popu... 75 4e-11
ref|NP_849858.1| RNA recognition motif-containing protein [Arabi... 75 4e-11
>gb|EOY25166.1| RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 356
Score = 79.7 bits (195), Expect = 1e-12
Identities = 39/57 (68%), Positives = 49/57 (85%)
Frame = +2
Query: 713 FSPSPQAKTVKINNISLLASQRDVQEFFSFSGGIDYVEMQSESENTQCAYVTFKESQ 883
F S Q KTVK++N+SL A+QRDV+EFFSFSG I+YVEMQS++E +Q AYVTFK+SQ
Sbjct: 73 FMFSLQIKTVKVSNVSLGATQRDVKEFFSFSGDIEYVEMQSDNEQSQVAYVTFKDSQ 129
>gb|EOY25167.1| RNA-binding (RRM/RBD/RNP motifs) family protein isoform 2
[Theobroma cacao]
Length = 281
Score = 77.4 bits (189), Expect = 7e-12
Identities = 36/50 (72%), Positives = 46/50 (92%)
Frame = +2
Query: 734 KTVKINNISLLASQRDVQEFFSFSGGIDYVEMQSESENTQCAYVTFKESQ 883
KTVK++N+SL A+QRDV+EFFSFSG I+YVEMQS++E +Q AYVTFK+SQ
Sbjct: 5 KTVKVSNVSLGATQRDVKEFFSFSGDIEYVEMQSDNEQSQVAYVTFKDSQ 54
>gb|EOY01343.1| RNA-binding family protein isoform 3, partial [Theobroma cacao]
Length = 288
Score = 77.4 bits (189), Expect = 7e-12
Identities = 36/50 (72%), Positives = 44/50 (88%)
Frame = +2
Query: 734 KTVKINNISLLASQRDVQEFFSFSGGIDYVEMQSESENTQCAYVTFKESQ 883
+TVK++NISL ASQRD++EFFSFSG I YVEM+ E+EN Q AYVTFK+SQ
Sbjct: 22 RTVKVSNISLAASQRDIKEFFSFSGDIQYVEMRRETENAQVAYVTFKDSQ 71
>gb|EOY01342.1| RNA-binding family protein isoform 2 [Theobroma cacao]
Length = 282
Score = 77.4 bits (189), Expect = 7e-12
Identities = 36/50 (72%), Positives = 44/50 (88%)
Frame = +2
Query: 734 KTVKINNISLLASQRDVQEFFSFSGGIDYVEMQSESENTQCAYVTFKESQ 883
+TVK++NISL ASQRD++EFFSFSG I YVEM+ E+EN Q AYVTFK+SQ
Sbjct: 3 RTVKVSNISLAASQRDIKEFFSFSGDIQYVEMRRETENAQVAYVTFKDSQ 52
>gb|EOY01341.1| RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 311
Score = 77.4 bits (189), Expect = 7e-12
Identities = 36/50 (72%), Positives = 44/50 (88%)
Frame = +2
Query: 734 KTVKINNISLLASQRDVQEFFSFSGGIDYVEMQSESENTQCAYVTFKESQ 883
+TVK++NISL ASQRD++EFFSFSG I YVEM+ E+EN Q AYVTFK+SQ
Sbjct: 32 RTVKVSNISLAASQRDIKEFFSFSGDIQYVEMRRETENAQVAYVTFKDSQ 81
>ref|NP_001051073.1| Os03g0713600 [Oryza sativa Japonica Group]
gi|18071362|gb|AAL58221.1|AC090882_24 putative splicing
regulatory protein [Oryza sativa Japonica Group]
gi|108710741|gb|ABF98536.1| RRM-containing protein,
putative, expressed [Oryza sativa Japonica Group]
gi|113549544|dbj|BAF12987.1| Os03g0713600 [Oryza sativa
Japonica Group]
Length = 284
Score = 77.0 bits (188), Expect = 9e-12
Identities = 36/52 (69%), Positives = 46/52 (88%)
Frame = +2
Query: 728 QAKTVKINNISLLASQRDVQEFFSFSGGIDYVEMQSESENTQCAYVTFKESQ 883
+ +TVK++NISL AS+R++ EFFSFSG I+YVEMQSESE +Q AYVTFK+SQ
Sbjct: 2 EVRTVKVSNISLNASKREITEFFSFSGDIEYVEMQSESERSQLAYVTFKDSQ 53
>gb|EXB53844.1| Protein vip1 [Morus notabilis]
Length = 311
Score = 76.6 bits (187), Expect = 1e-11
Identities = 35/50 (70%), Positives = 44/50 (88%)
Frame = +2
Query: 734 KTVKINNISLLASQRDVQEFFSFSGGIDYVEMQSESENTQCAYVTFKESQ 883
+TV++NNISL S+RD++EFFSFSG I YVEM+ ESE+TQ AYVTFK+SQ
Sbjct: 32 RTVRVNNISLAVSERDIKEFFSFSGDIQYVEMRRESESTQLAYVTFKDSQ 81
>ref|XP_002326541.1| predicted protein [Populus trichocarpa]
Length = 267
Score = 76.6 bits (187), Expect = 1e-11
Identities = 35/52 (67%), Positives = 47/52 (90%)
Frame = +2
Query: 728 QAKTVKINNISLLASQRDVQEFFSFSGGIDYVEMQSESENTQCAYVTFKESQ 883
Q KTVK++N+SL AS+RD++EFFSFSG I+YVEM+S++E +Q AYVTFK+SQ
Sbjct: 2 QVKTVKVSNVSLGASERDLKEFFSFSGDIEYVEMKSDNERSQIAYVTFKDSQ 53
>ref|XP_006826576.1| hypothetical protein AMTR_s00138p00027500 [Amborella trichopoda]
gi|548830957|gb|ERM93813.1| hypothetical protein
AMTR_s00138p00027500 [Amborella trichopoda]
Length = 362
Score = 76.3 bits (186), Expect = 1e-11
Identities = 36/50 (72%), Positives = 44/50 (88%)
Frame = +2
Query: 734 KTVKINNISLLASQRDVQEFFSFSGGIDYVEMQSESENTQCAYVTFKESQ 883
+TVK++NISL ASQ+D++EFFSFSG I YVEMQ ESE +Q AYVTFK+SQ
Sbjct: 81 RTVKVSNISLRASQQDIKEFFSFSGDIQYVEMQRESEGSQLAYVTFKDSQ 130
>gb|EAY91637.1| hypothetical protein OsI_13273 [Oryza sativa Indica Group]
gi|125587696|gb|EAZ28360.1| hypothetical protein
OsJ_12338 [Oryza sativa Japonica Group]
Length = 305
Score = 76.3 bits (186), Expect = 1e-11
Identities = 36/50 (72%), Positives = 45/50 (90%)
Frame = +2
Query: 734 KTVKINNISLLASQRDVQEFFSFSGGIDYVEMQSESENTQCAYVTFKESQ 883
+TVK++NISL AS+R++ EFFSFSG I+YVEMQSESE +Q AYVTFK+SQ
Sbjct: 25 RTVKVSNISLNASKREITEFFSFSGDIEYVEMQSESERSQLAYVTFKDSQ 74
>ref|XP_006650496.1| PREDICTED: protein vip1-like [Oryza brachyantha]
Length = 284
Score = 75.9 bits (185), Expect = 2e-11
Identities = 36/52 (69%), Positives = 45/52 (86%)
Frame = +2
Query: 728 QAKTVKINNISLLASQRDVQEFFSFSGGIDYVEMQSESENTQCAYVTFKESQ 883
+ +TVK+ NISL AS+R++ EFFSFSG I+YVEMQSESE +Q AYVTFK+SQ
Sbjct: 2 EVRTVKVANISLNASKREITEFFSFSGDIEYVEMQSESERSQLAYVTFKDSQ 53
>ref|XP_004142266.1| PREDICTED: protein vip1-like [Cucumis sativus]
gi|449523840|ref|XP_004168931.1| PREDICTED: protein
vip1-like [Cucumis sativus]
Length = 278
Score = 75.9 bits (185), Expect = 2e-11
Identities = 36/50 (72%), Positives = 44/50 (88%)
Frame = +2
Query: 734 KTVKINNISLLASQRDVQEFFSFSGGIDYVEMQSESENTQCAYVTFKESQ 883
+TVK++NIS L S+RD++EFFSFSG I YVEMQ ESENTQ AYVT+K+SQ
Sbjct: 4 RTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQ 53
>ref|XP_002314770.2| hypothetical protein POPTR_0010s11420g [Populus trichocarpa]
gi|550329572|gb|EEF00941.2| hypothetical protein
POPTR_0010s11420g [Populus trichocarpa]
Length = 289
Score = 75.5 bits (184), Expect = 2e-11
Identities = 37/59 (62%), Positives = 46/59 (77%)
Frame = +2
Query: 704 EPFFSPSPQAKTVKINNISLLASQRDVQEFFSFSGGIDYVEMQSESENTQCAYVTFKES 880
+P PS +TVK++NISL A+ RD++EFFSFSG I YVEM+ ESE TQ AYVTF+ES
Sbjct: 5 KPKLYPSQIVRTVKVSNISLTATDRDIEEFFSFSGDILYVEMRRESETTQLAYVTFEES 63
>gb|EMT19305.1| Protein vip1 [Aegilops tauschii]
Length = 337
Score = 75.5 bits (184), Expect = 2e-11
Identities = 35/53 (66%), Positives = 46/53 (86%)
Frame = +2
Query: 725 PQAKTVKINNISLLASQRDVQEFFSFSGGIDYVEMQSESENTQCAYVTFKESQ 883
P+ +TVK+ NISL AS+R++ EFFSFSG I+YVEMQSE++ +Q AYVTFK+SQ
Sbjct: 72 PKVRTVKVGNISLSASKREITEFFSFSGDIEYVEMQSETDWSQLAYVTFKDSQ 124
>gb|AFK43849.1| unknown [Lotus japonicus]
Length = 286
Score = 75.5 bits (184), Expect = 2e-11
Identities = 34/50 (68%), Positives = 44/50 (88%)
Frame = +2
Query: 734 KTVKINNISLLASQRDVQEFFSFSGGIDYVEMQSESENTQCAYVTFKESQ 883
KT+K++N+SL AS+RD++EFFSFSG I+YVEMQS E +Q AYVTFK+SQ
Sbjct: 4 KTIKVSNVSLGASERDIKEFFSFSGDIEYVEMQSHDERSQIAYVTFKDSQ 53
>ref|XP_006352893.1| PREDICTED: protein vip1-like [Solanum tuberosum]
Length = 281
Score = 75.1 bits (183), Expect = 3e-11
Identities = 34/50 (68%), Positives = 45/50 (90%)
Frame = +2
Query: 734 KTVKINNISLLASQRDVQEFFSFSGGIDYVEMQSESENTQCAYVTFKESQ 883
KTVK++N+SL AS+RD++EFFSFSG I+YVEMQS++E +Q AYVTF +SQ
Sbjct: 4 KTVKVSNVSLGASERDIKEFFSFSGDIEYVEMQSDTERSQIAYVTFNDSQ 53
>ref|XP_004245956.1| PREDICTED: protein vip1-like isoform 1 [Solanum lycopersicum]
Length = 281
Score = 75.1 bits (183), Expect = 3e-11
Identities = 34/50 (68%), Positives = 45/50 (90%)
Frame = +2
Query: 734 KTVKINNISLLASQRDVQEFFSFSGGIDYVEMQSESENTQCAYVTFKESQ 883
KTVK++N+SL AS+RD++EFFSFSG I+YVEMQS++E +Q AYVTF +SQ
Sbjct: 4 KTVKVSNVSLGASERDIKEFFSFSGDIEYVEMQSDTERSQIAYVTFNDSQ 53
>dbj|BAC42423.1| unknown protein [Arabidopsis thaliana]
Length = 249
Score = 74.7 bits (182), Expect = 4e-11
Identities = 34/50 (68%), Positives = 45/50 (90%)
Frame = +2
Query: 734 KTVKINNISLLASQRDVQEFFSFSGGIDYVEMQSESENTQCAYVTFKESQ 883
KTVKI+N+SL+ S++DV+EFFSFSG I YVEM+SE++ +Q AYVTFK+SQ
Sbjct: 29 KTVKISNVSLIVSKKDVKEFFSFSGDIQYVEMRSETQESQVAYVTFKDSQ 78
>ref|XP_002297716.2| hypothetical protein POPTR_0001s02090g [Populus trichocarpa]
gi|550346277|gb|EEE82521.2| hypothetical protein
POPTR_0001s02090g [Populus trichocarpa]
Length = 280
Score = 74.7 bits (182), Expect = 4e-11
Identities = 34/50 (68%), Positives = 46/50 (92%)
Frame = +2
Query: 734 KTVKINNISLLASQRDVQEFFSFSGGIDYVEMQSESENTQCAYVTFKESQ 883
KTVK++N+SL AS+RD++EFFSFSG I+YVEM+S++E +Q AYVTFK+SQ
Sbjct: 4 KTVKVSNVSLGASERDLKEFFSFSGDIEYVEMKSDNERSQIAYVTFKDSQ 53
>ref|NP_849858.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332196607|gb|AEE34728.1| RNA recognition
motif-containing protein [Arabidopsis thaliana]
Length = 279
Score = 74.7 bits (182), Expect = 4e-11
Identities = 34/50 (68%), Positives = 45/50 (90%)
Frame = +2
Query: 734 KTVKINNISLLASQRDVQEFFSFSGGIDYVEMQSESENTQCAYVTFKESQ 883
KTVKI+N+SL+ S++DV+EFFSFSG I YVEM+SE++ +Q AYVTFK+SQ
Sbjct: 30 KTVKISNVSLIVSKKDVKEFFSFSGDIQYVEMRSETQESQVAYVTFKDSQ 79