BLASTX nr result
ID: Zingiber25_contig00024125
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00024125
(431 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q2QY07.1|CCDA2_ORYSJ RecName: Full=Cytochrome c-type biogenes... 141 8e-32
sp|Q2RAR6.1|CCDA1_ORYSJ RecName: Full=Cytochrome c-type biogenes... 141 8e-32
emb|CBX24416.1| hypothetical_protein [Oryza glaberrima] 141 8e-32
ref|NP_001065713.2| Os11g0140800 [Oryza sativa Japonica Group] g... 141 8e-32
ref|XP_002450242.1| hypothetical protein SORBIDRAFT_05g002430 [S... 141 8e-32
gb|EEC67640.1| hypothetical protein OsI_35045 [Oryza sativa Indi... 141 8e-32
tpg|DAA39231.1| TPA: hypothetical protein ZEAMMB73_102687 [Zea m... 140 2e-31
gb|AAO16019.1| biogenesis protein [Hordeum vulgare subsp. vulgar... 140 2e-31
ref|XP_004977496.1| PREDICTED: cytochrome c-type biogenesis ccda... 140 2e-31
ref|XP_004294507.1| PREDICTED: cytochrome c-type biogenesis ccda... 139 4e-31
ref|XP_004978636.1| PREDICTED: cytochrome c-type biogenesis ccda... 139 5e-31
ref|XP_003578956.1| PREDICTED: cytochrome c-type biogenesis ccda... 139 5e-31
gb|AAO16018.1| chloroplast biogenesis protein [Lotus japonicus] 137 2e-30
ref|XP_006464679.1| PREDICTED: cytochrome c-type biogenesis ccda... 135 4e-30
ref|XP_006451992.1| hypothetical protein CICLE_v10009149mg [Citr... 135 4e-30
ref|XP_006451991.1| hypothetical protein CICLE_v10009149mg [Citr... 135 4e-30
ref|XP_002284546.1| PREDICTED: cytochrome c-type biogenesis ccda... 134 1e-29
ref|XP_006401588.1| hypothetical protein EUTSA_v10013940mg [Eutr... 134 1e-29
gb|ESW05136.1| hypothetical protein PHAVU_011G155100g [Phaseolus... 134 2e-29
ref|XP_006664317.1| PREDICTED: cytochrome c-type biogenesis ccda... 133 3e-29
>sp|Q2QY07.1|CCDA2_ORYSJ RecName: Full=Cytochrome c-type biogenesis ccda-like chloroplastic
protein 2; AltName: Full=Cytochrome b6f biogenesis
protein CCDA2; Flags: Precursor
gi|77552967|gb|ABA95763.1| Cytochrome C biogenesis
protein transmembrane region containing protein,
expressed [Oryza sativa Japonica Group]
Length = 362
Score = 141 bits (356), Expect = 8e-32
Identities = 72/94 (76%), Positives = 78/94 (82%)
Frame = +3
Query: 3 ALAASPCSTPVLATLLGYVATSKDPXXXXXXXXXXXXXXVAPLLIAASFAGALQNLLSFR 182
ALAASPCSTPVLATLLGYVATS+DP VAPLLIAASFAGALQ+LLSFR
Sbjct: 269 ALAASPCSTPVLATLLGYVATSRDPIVGGSLLLTYTTGYVAPLLIAASFAGALQSLLSFR 328
Query: 183 RYSSWINPMSGALLLGGGIYTLLDRLFPASSMAM 284
RYS+WINP+SGA LLGGG+YTLLDRLFPA+SM M
Sbjct: 329 RYSAWINPISGAFLLGGGVYTLLDRLFPATSMVM 362
>sp|Q2RAR6.1|CCDA1_ORYSJ RecName: Full=Cytochrome c-type biogenesis ccda-like chloroplastic
protein 1; AltName: Full=Cytochrome b6f biogenesis
protein CCDA1; Flags: Precursor
gi|77548619|gb|ABA91416.1| Cytochrome C biogenesis
protein transmembrane region containing protein,
expressed [Oryza sativa Japonica Group]
gi|215769034|dbj|BAH01263.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 367
Score = 141 bits (356), Expect = 8e-32
Identities = 72/94 (76%), Positives = 78/94 (82%)
Frame = +3
Query: 3 ALAASPCSTPVLATLLGYVATSKDPXXXXXXXXXXXXXXVAPLLIAASFAGALQNLLSFR 182
ALAASPCSTPVLATLLGYVATS+DP VAPLLIAASFAGALQ+LLSFR
Sbjct: 274 ALAASPCSTPVLATLLGYVATSRDPIVGGSLLLTYTTGYVAPLLIAASFAGALQSLLSFR 333
Query: 183 RYSSWINPMSGALLLGGGIYTLLDRLFPASSMAM 284
RYS+WINP+SGA LLGGG+YTLLDRLFPA+SM M
Sbjct: 334 RYSAWINPISGAFLLGGGVYTLLDRLFPATSMVM 367
>emb|CBX24416.1| hypothetical_protein [Oryza glaberrima]
Length = 353
Score = 141 bits (356), Expect = 8e-32
Identities = 72/94 (76%), Positives = 78/94 (82%)
Frame = +3
Query: 3 ALAASPCSTPVLATLLGYVATSKDPXXXXXXXXXXXXXXVAPLLIAASFAGALQNLLSFR 182
ALAASPCSTPVLATLLGYVATS+DP VAPLLIAASFAGALQ+LLSFR
Sbjct: 260 ALAASPCSTPVLATLLGYVATSRDPIVGGSLLLTYTTGYVAPLLIAASFAGALQSLLSFR 319
Query: 183 RYSSWINPMSGALLLGGGIYTLLDRLFPASSMAM 284
RYS+WINP+SGA LLGGG+YTLLDRLFPA+SM M
Sbjct: 320 RYSAWINPISGAFLLGGGVYTLLDRLFPATSMVM 353
>ref|NP_001065713.2| Os11g0140800 [Oryza sativa Japonica Group]
gi|255679775|dbj|BAF27558.2| Os11g0140800 [Oryza sativa
Japonica Group]
Length = 113
Score = 141 bits (356), Expect = 8e-32
Identities = 72/94 (76%), Positives = 78/94 (82%)
Frame = +3
Query: 3 ALAASPCSTPVLATLLGYVATSKDPXXXXXXXXXXXXXXVAPLLIAASFAGALQNLLSFR 182
ALAASPCSTPVLATLLGYVATS+DP VAPLLIAASFAGALQ+LLSFR
Sbjct: 20 ALAASPCSTPVLATLLGYVATSRDPIVGGSLLLTYTTGYVAPLLIAASFAGALQSLLSFR 79
Query: 183 RYSSWINPMSGALLLGGGIYTLLDRLFPASSMAM 284
RYS+WINP+SGA LLGGG+YTLLDRLFPA+SM M
Sbjct: 80 RYSAWINPISGAFLLGGGVYTLLDRLFPATSMVM 113
>ref|XP_002450242.1| hypothetical protein SORBIDRAFT_05g002430 [Sorghum bicolor]
gi|241936085|gb|EES09230.1| hypothetical protein
SORBIDRAFT_05g002430 [Sorghum bicolor]
Length = 353
Score = 141 bits (356), Expect = 8e-32
Identities = 71/94 (75%), Positives = 79/94 (84%)
Frame = +3
Query: 3 ALAASPCSTPVLATLLGYVATSKDPXXXXXXXXXXXXXXVAPLLIAASFAGALQNLLSFR 182
ALAASPCSTPVLATLLGYVATS+DP VAPLL+AASFAGALQ+LLSFR
Sbjct: 260 ALAASPCSTPVLATLLGYVATSRDPIIGGSLLLTYTTGYVAPLLVAASFAGALQSLLSFR 319
Query: 183 RYSSWINPMSGALLLGGGIYTLLDRLFPASSMAM 284
RYS+WINP+SGA LLGGG+YTLLDR+FPA+SMAM
Sbjct: 320 RYSAWINPISGAFLLGGGVYTLLDRVFPATSMAM 353
>gb|EEC67640.1| hypothetical protein OsI_35045 [Oryza sativa Indica Group]
gi|222615496|gb|EEE51628.1| hypothetical protein
OsJ_32910 [Oryza sativa Japonica Group]
Length = 362
Score = 141 bits (356), Expect = 8e-32
Identities = 72/94 (76%), Positives = 78/94 (82%)
Frame = +3
Query: 3 ALAASPCSTPVLATLLGYVATSKDPXXXXXXXXXXXXXXVAPLLIAASFAGALQNLLSFR 182
ALAASPCSTPVLATLLGYVATS+DP VAPLLIAASFAGALQ+LLSFR
Sbjct: 269 ALAASPCSTPVLATLLGYVATSRDPIVGGSLLLTYTTGYVAPLLIAASFAGALQSLLSFR 328
Query: 183 RYSSWINPMSGALLLGGGIYTLLDRLFPASSMAM 284
RYS+WINP+SGA LLGGG+YTLLDRLFPA+SM M
Sbjct: 329 RYSAWINPISGAFLLGGGVYTLLDRLFPATSMVM 362
>tpg|DAA39231.1| TPA: hypothetical protein ZEAMMB73_102687 [Zea mays]
Length = 330
Score = 140 bits (353), Expect = 2e-31
Identities = 71/94 (75%), Positives = 78/94 (82%)
Frame = +3
Query: 3 ALAASPCSTPVLATLLGYVATSKDPXXXXXXXXXXXXXXVAPLLIAASFAGALQNLLSFR 182
ALAASPCSTPVLATLLGYVATS+DP VAPLLIAASFAGALQ+LLSFR
Sbjct: 237 ALAASPCSTPVLATLLGYVATSRDPIIGGSLLLTYTTGYVAPLLIAASFAGALQSLLSFR 296
Query: 183 RYSSWINPMSGALLLGGGIYTLLDRLFPASSMAM 284
RYS+WINP+SGA LLGGG+YTLLDR+FPA+SM M
Sbjct: 297 RYSAWINPISGAFLLGGGVYTLLDRVFPATSMVM 330
>gb|AAO16019.1| biogenesis protein [Hordeum vulgare subsp. vulgare]
gi|326512184|dbj|BAJ96073.1| predicted protein [Hordeum
vulgare subsp. vulgare]
Length = 344
Score = 140 bits (353), Expect = 2e-31
Identities = 71/94 (75%), Positives = 78/94 (82%)
Frame = +3
Query: 3 ALAASPCSTPVLATLLGYVATSKDPXXXXXXXXXXXXXXVAPLLIAASFAGALQNLLSFR 182
ALAASPCSTPVLATLLGYVATS+DP VAPLLIAASFAGALQ+LLSFR
Sbjct: 251 ALAASPCSTPVLATLLGYVATSRDPIVGGSLLLTYTTGYVAPLLIAASFAGALQSLLSFR 310
Query: 183 RYSSWINPMSGALLLGGGIYTLLDRLFPASSMAM 284
RYS+WINP+SGA LLGGG+YTLLD+LFPA+SM M
Sbjct: 311 RYSTWINPISGAFLLGGGVYTLLDKLFPATSMVM 344
>ref|XP_004977496.1| PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic
protein 1-like [Setaria italica]
Length = 347
Score = 140 bits (352), Expect = 2e-31
Identities = 71/94 (75%), Positives = 77/94 (81%)
Frame = +3
Query: 3 ALAASPCSTPVLATLLGYVATSKDPXXXXXXXXXXXXXXVAPLLIAASFAGALQNLLSFR 182
ALAASPCSTPVLATLLGYVATSKDP VAPLLIAASFAG LQ+LLSFR
Sbjct: 254 ALAASPCSTPVLATLLGYVATSKDPIVGGSLLLTYTTGYVAPLLIAASFAGVLQSLLSFR 313
Query: 183 RYSSWINPMSGALLLGGGIYTLLDRLFPASSMAM 284
RYS+WINP+SGA LLGGG+YTLLDR+FPA+SM M
Sbjct: 314 RYSAWINPISGAFLLGGGVYTLLDRVFPATSMVM 347
>ref|XP_004294507.1| PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic
protein 2-like [Fragaria vesca subsp. vesca]
Length = 360
Score = 139 bits (350), Expect = 4e-31
Identities = 70/94 (74%), Positives = 78/94 (82%)
Frame = +3
Query: 3 ALAASPCSTPVLATLLGYVATSKDPXXXXXXXXXXXXXXVAPLLIAASFAGALQNLLSFR 182
ALAASPCSTPVLATLLGYVATSKDP VAPLL+AASFAGALQ LLSFR
Sbjct: 267 ALAASPCSTPVLATLLGYVATSKDPFIGGSLLLTYTTGYVAPLLLAASFAGALQRLLSFR 326
Query: 183 RYSSWINPMSGALLLGGGIYTLLDRLFPASSMAM 284
++S+WINP+SGALLLGGG+YT LDRLFPA++MAM
Sbjct: 327 KFSAWINPISGALLLGGGVYTFLDRLFPATTMAM 360
>ref|XP_004978636.1| PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic
protein 1-like [Setaria italica]
Length = 347
Score = 139 bits (349), Expect = 5e-31
Identities = 70/94 (74%), Positives = 77/94 (81%)
Frame = +3
Query: 3 ALAASPCSTPVLATLLGYVATSKDPXXXXXXXXXXXXXXVAPLLIAASFAGALQNLLSFR 182
ALAASPCSTPVLATLLGYVATS+DP VAPLLIAASFAG LQ+LLSFR
Sbjct: 254 ALAASPCSTPVLATLLGYVATSRDPIVGGSLLLTYTTGYVAPLLIAASFAGVLQSLLSFR 313
Query: 183 RYSSWINPMSGALLLGGGIYTLLDRLFPASSMAM 284
RYS+WINP+SGA LLGGG+YTLLDR+FPA+SM M
Sbjct: 314 RYSAWINPISGAFLLGGGVYTLLDRVFPATSMVM 347
>ref|XP_003578956.1| PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic
protein 2-like [Brachypodium distachyon]
Length = 348
Score = 139 bits (349), Expect = 5e-31
Identities = 70/94 (74%), Positives = 77/94 (81%)
Frame = +3
Query: 3 ALAASPCSTPVLATLLGYVATSKDPXXXXXXXXXXXXXXVAPLLIAASFAGALQNLLSFR 182
ALAASPCSTPVLATLLGYVATS+DP VAPLLIAASFAGALQ+LLSFR
Sbjct: 255 ALAASPCSTPVLATLLGYVATSRDPIVGGSLLLTYTTGYVAPLLIAASFAGALQSLLSFR 314
Query: 183 RYSSWINPMSGALLLGGGIYTLLDRLFPASSMAM 284
RYS+WINP+SGA LLGGG+YTLLD+LFP +SM M
Sbjct: 315 RYSTWINPISGAFLLGGGVYTLLDKLFPVTSMVM 348
>gb|AAO16018.1| chloroplast biogenesis protein [Lotus japonicus]
Length = 345
Score = 137 bits (344), Expect = 2e-30
Identities = 67/94 (71%), Positives = 78/94 (82%)
Frame = +3
Query: 3 ALAASPCSTPVLATLLGYVATSKDPXXXXXXXXXXXXXXVAPLLIAASFAGALQNLLSFR 182
ALAASPCSTPVLATLLGYVA SKDP +APLL+AASFAGALQ+LLSFR
Sbjct: 252 ALAASPCSTPVLATLLGYVAASKDPVIGGSLLLTYTTGYIAPLLLAASFAGALQSLLSFR 311
Query: 183 RYSSWINPMSGALLLGGGIYTLLDRLFPASSMAM 284
+YS+WINP+SGA+LLGGG+YT LD+LFPA++MAM
Sbjct: 312 KYSAWINPISGAMLLGGGVYTFLDKLFPATTMAM 345
>ref|XP_006464679.1| PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic
protein-like isoform X1 [Citrus sinensis]
gi|568820340|ref|XP_006464680.1| PREDICTED: cytochrome
c-type biogenesis ccda-like chloroplastic protein-like
isoform X2 [Citrus sinensis]
Length = 341
Score = 135 bits (341), Expect = 4e-30
Identities = 71/94 (75%), Positives = 78/94 (82%)
Frame = +3
Query: 3 ALAASPCSTPVLATLLGYVATSKDPXXXXXXXXXXXXXXVAPLLIAASFAGALQNLLSFR 182
ALAASPCSTPVLATLLGYVATSKDP VAPLL+AASFAGALQ+LLSFR
Sbjct: 249 ALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQSLLSFR 308
Query: 183 RYSSWINPMSGALLLGGGIYTLLDRLFPASSMAM 284
++SSWINPMSGALLLGGG+YT LDRLFP ++MAM
Sbjct: 309 KFSSWINPMSGALLLGGGLYTFLDRLFP-TTMAM 341
>ref|XP_006451992.1| hypothetical protein CICLE_v10009149mg [Citrus clementina]
gi|557555218|gb|ESR65232.1| hypothetical protein
CICLE_v10009149mg [Citrus clementina]
Length = 270
Score = 135 bits (341), Expect = 4e-30
Identities = 71/94 (75%), Positives = 78/94 (82%)
Frame = +3
Query: 3 ALAASPCSTPVLATLLGYVATSKDPXXXXXXXXXXXXXXVAPLLIAASFAGALQNLLSFR 182
ALAASPCSTPVLATLLGYVATSKDP VAPLL+AASFAGALQ+LLSFR
Sbjct: 178 ALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQSLLSFR 237
Query: 183 RYSSWINPMSGALLLGGGIYTLLDRLFPASSMAM 284
++SSWINPMSGALLLGGG+YT LDRLFP ++MAM
Sbjct: 238 KFSSWINPMSGALLLGGGLYTFLDRLFP-TTMAM 270
>ref|XP_006451991.1| hypothetical protein CICLE_v10009149mg [Citrus clementina]
gi|568820342|ref|XP_006464681.1| PREDICTED: cytochrome
c-type biogenesis ccda-like chloroplastic protein-like
isoform X3 [Citrus sinensis] gi|557555217|gb|ESR65231.1|
hypothetical protein CICLE_v10009149mg [Citrus
clementina]
Length = 277
Score = 135 bits (341), Expect = 4e-30
Identities = 71/94 (75%), Positives = 78/94 (82%)
Frame = +3
Query: 3 ALAASPCSTPVLATLLGYVATSKDPXXXXXXXXXXXXXXVAPLLIAASFAGALQNLLSFR 182
ALAASPCSTPVLATLLGYVATSKDP VAPLL+AASFAGALQ+LLSFR
Sbjct: 185 ALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQSLLSFR 244
Query: 183 RYSSWINPMSGALLLGGGIYTLLDRLFPASSMAM 284
++SSWINPMSGALLLGGG+YT LDRLFP ++MAM
Sbjct: 245 KFSSWINPMSGALLLGGGLYTFLDRLFP-TTMAM 277
>ref|XP_002284546.1| PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic
protein 2 [Vitis vinifera] gi|302143076|emb|CBI20371.3|
unnamed protein product [Vitis vinifera]
Length = 358
Score = 134 bits (338), Expect = 1e-29
Identities = 69/90 (76%), Positives = 74/90 (82%)
Frame = +3
Query: 3 ALAASPCSTPVLATLLGYVATSKDPXXXXXXXXXXXXXXVAPLLIAASFAGALQNLLSFR 182
ALAASPCSTPVLATLLGYVATSKDP VAPLL+AASFAGALQ+LLSFR
Sbjct: 266 ALAASPCSTPVLATLLGYVATSKDPVIGGSLLLTYTTGYVAPLLLAASFAGALQSLLSFR 325
Query: 183 RYSSWINPMSGALLLGGGIYTLLDRLFPAS 272
++S+WINP SGALLLGGGIYTLLDRLFP S
Sbjct: 326 KFSAWINPTSGALLLGGGIYTLLDRLFPTS 355
>ref|XP_006401588.1| hypothetical protein EUTSA_v10013940mg [Eutrema salsugineum]
gi|557102678|gb|ESQ43041.1| hypothetical protein
EUTSA_v10013940mg [Eutrema salsugineum]
Length = 357
Score = 134 bits (337), Expect = 1e-29
Identities = 67/94 (71%), Positives = 77/94 (81%)
Frame = +3
Query: 3 ALAASPCSTPVLATLLGYVATSKDPXXXXXXXXXXXXXXVAPLLIAASFAGALQNLLSFR 182
ALAASPCSTPVLATLLGYVATS+DP VAPL++AASFAGALQ+LLSFR
Sbjct: 264 ALAASPCSTPVLATLLGYVATSRDPVIGGSLLLTYTTGYVAPLILAASFAGALQSLLSFR 323
Query: 183 RYSSWINPMSGALLLGGGIYTLLDRLFPASSMAM 284
+ S+WINP+SGALLLGGG+YT LDRLFPA++M M
Sbjct: 324 KVSAWINPISGALLLGGGLYTFLDRLFPAATMVM 357
>gb|ESW05136.1| hypothetical protein PHAVU_011G155100g [Phaseolus vulgaris]
Length = 345
Score = 134 bits (336), Expect = 2e-29
Identities = 66/94 (70%), Positives = 77/94 (81%)
Frame = +3
Query: 3 ALAASPCSTPVLATLLGYVATSKDPXXXXXXXXXXXXXXVAPLLIAASFAGALQNLLSFR 182
ALAASPCSTPVLATLLGYVA SKDP V+PLL+AASFAGALQ+LLSFR
Sbjct: 252 ALAASPCSTPVLATLLGYVAASKDPVIGGSLLLTYTTGYVSPLLLAASFAGALQSLLSFR 311
Query: 183 RYSSWINPMSGALLLGGGIYTLLDRLFPASSMAM 284
++S+WINP+SGA+LLGGG+YT LDRLFPA++M M
Sbjct: 312 KFSAWINPISGAMLLGGGLYTFLDRLFPATTMVM 345
>ref|XP_006664317.1| PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic
protein 2-like [Oryza brachyantha]
Length = 364
Score = 133 bits (334), Expect = 3e-29
Identities = 70/94 (74%), Positives = 76/94 (80%)
Frame = +3
Query: 3 ALAASPCSTPVLATLLGYVATSKDPXXXXXXXXXXXXXXVAPLLIAASFAGALQNLLSFR 182
ALAASPCSTPVLATLLGYVATS+DP VAPLLIAASFAGALQ+LLSFR
Sbjct: 272 ALAASPCSTPVLATLLGYVATSRDPIVGGSLLLTYTTGYVAPLLIAASFAGALQSLLSFR 331
Query: 183 RYSSWINPMSGALLLGGGIYTLLDRLFPASSMAM 284
RYS+W P+SGA LLGGG+YTLLDRLFPA+SM M
Sbjct: 332 RYSAW-KPISGAFLLGGGVYTLLDRLFPATSMVM 364