BLASTX nr result

ID: Zingiber25_contig00024103 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00024103
         (650 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002441659.1| hypothetical protein SORBIDRAFT_08g000390 [S...    59   9e-07
dbj|BAK03409.1| predicted protein [Hordeum vulgare subsp. vulgare]     56   8e-06
dbj|BAJ89851.1| predicted protein [Hordeum vulgare subsp. vulgare]     56   8e-06

>ref|XP_002441659.1| hypothetical protein SORBIDRAFT_08g000390 [Sorghum bicolor]
            gi|241942352|gb|EES15497.1| hypothetical protein
            SORBIDRAFT_08g000390 [Sorghum bicolor]
          Length = 1128

 Score = 59.3 bits (142), Expect = 9e-07
 Identities = 49/188 (26%), Positives = 80/188 (42%)
 Frame = +1

Query: 82   LPGRHSRSGQFRRDGFLSQQDDDHSSPSTATSVRTDLVLGMPDEAINNSEEISGCLTSMK 261
            +P +HS S             +DH SPS+A +V TDL L  P  + +             
Sbjct: 589  VPSQHSNSSN-------CDNPEDHVSPSSAAAVTTDLALATPRGSSS------------- 628

Query: 262  PQLLRESGTDLKSQQDHFKFSSCLPIVEVDMVKGNDLNFPVESFYCSAHQDSQAKGTNPL 441
                ++S   L+   +  + S  L   +VD +     +F  + + C     S    T+P 
Sbjct: 629  ----KDSSNALRKHVEDAEGSIQLMPKKVDDLNLKPPHFSAQPYTCF-RSSSNWDQTSPS 683

Query: 442  VTHPFSQISGDFISLYDKPLLISSGTWLTLGLSNYKSFCTSLMKKVGRQEEAVRAVSQAI 621
              HP +         + +P  +++ T+    LSNYK     L K VGRQEEA+ A+  +I
Sbjct: 684  ALHPAASGGASAFGQWQRPSPLAAQTY---DLSNYKLLMERLFKAVGRQEEALSAICASI 740

Query: 622  ISYKTSER 645
            +  ++ ER
Sbjct: 741  VRCRSMER 748


>dbj|BAK03409.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1134

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 70/222 (31%), Positives = 93/222 (41%), Gaps = 15/222 (6%)
 Frame = +1

Query: 28   KSMTIPSLVLLGDEDSS-RLPGRHS--------RSGQFRRDGFLSQQD-DDHSSPSTATS 177
            KS++ PS+    +E     L GRHS        R  Q R++   S  D +DH SPS A S
Sbjct: 555  KSVSPPSISNQRNEGLVLNLQGRHSKGDEQFQDRHAQLRQEHLSSCHDREDHMSPSAAAS 614

Query: 178  VRTDLVLGMPDEAINNSEEISGCLTSMKPQLLRESGTDLKSQQDHFKFSSCLPIVEVDMV 357
            V TDLVL  P      S        S K  +  E  T L                     
Sbjct: 615  VATDLVLSTP----RGSSSKGTSSVSWKHAVDAEKSTHLTPN------------------ 652

Query: 358  KGNDLNF-PVESFY--CSAHQDSQAKGTNPLVTH-PFSQISGDFISLYDKPL-LISSGTW 522
            K +DLN  P + F    S+   +    T+P   H P S     F     KP  L + G+ 
Sbjct: 653  KVDDLNMEPPQPFAQPYSSRSSTNMGQTSPSALHSPASGGVSAFGQWRQKPSQLAAQGS- 711

Query: 523  LTLGLSNYKSFCTSLMKKVGRQEEAVRAVSQAIISYKTSERR 648
                LS+YK     L K VGRQEEA+ A+  +I+  +++ERR
Sbjct: 712  ---DLSDYKLLVERLFKVVGRQEEALSAICGSIVGCQSTERR 750


>dbj|BAJ89851.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1134

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 70/222 (31%), Positives = 93/222 (41%), Gaps = 15/222 (6%)
 Frame = +1

Query: 28   KSMTIPSLVLLGDEDSS-RLPGRHS--------RSGQFRRDGFLSQQD-DDHSSPSTATS 177
            KS++ PS+    +E     L GRHS        R  Q R++   S  D +DH SPS A S
Sbjct: 555  KSVSPPSISNQRNEGLVLNLQGRHSKGDEQFQDRHAQLRQEHLSSCHDREDHMSPSAAAS 614

Query: 178  VRTDLVLGMPDEAINNSEEISGCLTSMKPQLLRESGTDLKSQQDHFKFSSCLPIVEVDMV 357
            V TDLVL  P      S        S K  +  E  T L                     
Sbjct: 615  VATDLVLSTP----RGSSSKGTSSVSWKHAVDAEKSTHLTPN------------------ 652

Query: 358  KGNDLNF-PVESFY--CSAHQDSQAKGTNPLVTH-PFSQISGDFISLYDKPL-LISSGTW 522
            K +DLN  P + F    S+   +    T+P   H P S     F     KP  L + G+ 
Sbjct: 653  KVDDLNMEPPQPFAQPYSSRSSTNMGQTSPSALHSPASGGVSAFGQWRQKPSQLAAQGS- 711

Query: 523  LTLGLSNYKSFCTSLMKKVGRQEEAVRAVSQAIISYKTSERR 648
                LS+YK     L K VGRQEEA+ A+  +I+  +++ERR
Sbjct: 712  ---DLSDYKLLVERLFKVVGRQEEALSAICGSIVGCQSTERR 750


Top