BLASTX nr result

ID: Zingiber25_contig00024046 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00024046
         (407 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003557227.1| PREDICTED: GDP-mannose 4,6 dehydratase 2-lik...   262   3e-68
dbj|BAJ91700.1| predicted protein [Hordeum vulgare subsp. vulgar...   262   4e-68
ref|XP_006656614.1| PREDICTED: LOW QUALITY PROTEIN: GDP-mannose ...   261   5e-68
ref|XP_002437787.1| hypothetical protein SORBIDRAFT_10g002560 [S...   261   5e-68
dbj|BAD68653.1| putative root cap-specific protein [Oryza sativa...   261   9e-68
gb|EAZ35764.1| hypothetical protein OsJ_20054 [Oryza sativa Japo...   261   9e-68
ref|XP_004964482.1| PREDICTED: GDP-mannose 4,6 dehydratase 2-lik...   260   1e-67
gb|EMS46760.1| GDP-mannose 4,6 dehydratase 2 [Triticum urartu]        260   1e-67
gb|AFW85955.1| root cap-specific protein [Zea mays]                   259   2e-67
gb|EMS65992.1| GDP-mannose 4,6 dehydratase 2 [Triticum urartu]        259   3e-67
ref|XP_002436436.1| hypothetical protein SORBIDRAFT_10g002550 [S...   259   3e-67
gb|ACL54746.1| unknown [Zea mays]                                     258   4e-67
ref|NP_001149057.1| GDP-mannose 4,6 dehydratase 2 [Zea mays] gi|...   258   4e-67
gb|AAF70818.1| root cap-specific protein [Zea mays]                   253   1e-65
ref|XP_003612141.1| GDP-mannose 4 6-dehydratase [Medicago trunca...   246   2e-63
pdb|1N7G|A Chain A, Crystal Structure Of The Gdp-mannose 4,6-deh...   246   2e-63
ref|NP_190685.2| GDP-mannose 4,6 dehydratase 2 [Arabidopsis thal...   246   2e-63
gb|AAM61140.1| GDP-D-mannose-4,6-dehydratase MUR1 [Arabidopsis t...   246   2e-63
ref|XP_002877790.1| GDP-mannose 4,6 dehydratase [Arabidopsis lyr...   246   2e-63
ref|XP_003612144.1| GDP-mannose 4 6-dehydratase [Medicago trunca...   245   5e-63

>ref|XP_003557227.1| PREDICTED: GDP-mannose 4,6 dehydratase 2-like [Brachypodium
           distachyon]
          Length = 377

 Score =  262 bits (670), Expect = 3e-68
 Identities = 125/135 (92%), Positives = 130/135 (96%)
 Frame = -1

Query: 407 VAVSFEIPDYTADVVATGALRLLEAVRCSPKPARYYQAGSSEMFGSTPPPQSESSPFHPR 228
           VAVSFEIPDYTADV ATGALRLLEAVR S KP RYYQAGSSEMFGSTPPPQSE +PFHPR
Sbjct: 127 VAVSFEIPDYTADVTATGALRLLEAVRLSAKPMRYYQAGSSEMFGSTPPPQSEDTPFHPR 186

Query: 227 SPYAAAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIRLGLQT 48
           SPYAAAKVAAHWYTVNYREAYG+FACNG+LFNHESPRRGENFVTRKITRAVGRI++GLQT
Sbjct: 187 SPYAAAKVAAHWYTVNYREAYGIFACNGVLFNHESPRRGENFVTRKITRAVGRIKVGLQT 246

Query: 47  KVFLGNLSAARDWGF 3
           KVFLGNLSAARDWGF
Sbjct: 247 KVFLGNLSAARDWGF 261


>dbj|BAJ91700.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326524331|dbj|BAK00549.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 378

 Score =  262 bits (669), Expect = 4e-68
 Identities = 123/135 (91%), Positives = 131/135 (97%)
 Frame = -1

Query: 407 VAVSFEIPDYTADVVATGALRLLEAVRCSPKPARYYQAGSSEMFGSTPPPQSESSPFHPR 228
           VAVSFE+PDYTADV ATGALRLLEAVR S KP RYYQAGSSEMFGSTPPPQSE++PFHPR
Sbjct: 128 VAVSFEVPDYTADVTATGALRLLEAVRLSAKPMRYYQAGSSEMFGSTPPPQSEATPFHPR 187

Query: 227 SPYAAAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIRLGLQT 48
           SPYAAAKVAAHWYTVNYREAYG+FACNG+LFNHESPRRGENFVTRKITRA+GRI++GLQT
Sbjct: 188 SPYAAAKVAAHWYTVNYREAYGIFACNGVLFNHESPRRGENFVTRKITRAIGRIKVGLQT 247

Query: 47  KVFLGNLSAARDWGF 3
           KVFLGNLSAARDWGF
Sbjct: 248 KVFLGNLSAARDWGF 262


>ref|XP_006656614.1| PREDICTED: LOW QUALITY PROTEIN: GDP-mannose 4,6 dehydratase 2-like
           [Oryza brachyantha]
          Length = 366

 Score =  261 bits (668), Expect = 5e-68
 Identities = 124/135 (91%), Positives = 131/135 (97%)
 Frame = -1

Query: 407 VAVSFEIPDYTADVVATGALRLLEAVRCSPKPARYYQAGSSEMFGSTPPPQSESSPFHPR 228
           VAVSFE+PDYTADV ATGALRLLEAVR + KP RYYQAGSSEMFGSTPPPQ+E+SPFHPR
Sbjct: 116 VAVSFEVPDYTADVTATGALRLLEAVRLARKPIRYYQAGSSEMFGSTPPPQNEASPFHPR 175

Query: 227 SPYAAAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIRLGLQT 48
           SPYAAAKVAAHWYTVNYREAYGLFACNG+LFNHESPRRGENFVTRKITRAVGRI++GLQT
Sbjct: 176 SPYAAAKVAAHWYTVNYREAYGLFACNGVLFNHESPRRGENFVTRKITRAVGRIKVGLQT 235

Query: 47  KVFLGNLSAARDWGF 3
           KVFLGNLSAARDWGF
Sbjct: 236 KVFLGNLSAARDWGF 250


>ref|XP_002437787.1| hypothetical protein SORBIDRAFT_10g002560 [Sorghum bicolor]
           gi|241916010|gb|EER89154.1| hypothetical protein
           SORBIDRAFT_10g002560 [Sorghum bicolor]
          Length = 374

 Score =  261 bits (668), Expect = 5e-68
 Identities = 124/135 (91%), Positives = 130/135 (96%)
 Frame = -1

Query: 407 VAVSFEIPDYTADVVATGALRLLEAVRCSPKPARYYQAGSSEMFGSTPPPQSESSPFHPR 228
           VAVSFE+PDYTADV ATGALRLLEAVR S KP RYYQAGSSEMFGSTPPPQSE +PFHPR
Sbjct: 124 VAVSFEVPDYTADVTATGALRLLEAVRLSRKPIRYYQAGSSEMFGSTPPPQSEDTPFHPR 183

Query: 227 SPYAAAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIRLGLQT 48
           SPYAAAKVAAHWYTVNYREAYG+FACNG+LFNHESPRRGENFVTRKITRAVGRI++GLQT
Sbjct: 184 SPYAAAKVAAHWYTVNYREAYGIFACNGVLFNHESPRRGENFVTRKITRAVGRIKVGLQT 243

Query: 47  KVFLGNLSAARDWGF 3
           KVFLGNLSAARDWGF
Sbjct: 244 KVFLGNLSAARDWGF 258


>dbj|BAD68653.1| putative root cap-specific protein [Oryza sativa Japonica Group]
           gi|55296998|dbj|BAD68473.1| putative root cap-specific
           protein [Oryza sativa Japonica Group]
           gi|125553969|gb|EAY99574.1| hypothetical protein
           OsI_21549 [Oryza sativa Indica Group]
           gi|215686462|dbj|BAG87723.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215707052|dbj|BAG93512.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 375

 Score =  261 bits (666), Expect = 9e-68
 Identities = 125/135 (92%), Positives = 130/135 (96%)
 Frame = -1

Query: 407 VAVSFEIPDYTADVVATGALRLLEAVRCSPKPARYYQAGSSEMFGSTPPPQSESSPFHPR 228
           VAVSFE+PDYTADV ATGALRLLEAVR + K  RYYQAGSSEMFGSTPPPQSESSPFHPR
Sbjct: 125 VAVSFEVPDYTADVTATGALRLLEAVRLASKRIRYYQAGSSEMFGSTPPPQSESSPFHPR 184

Query: 227 SPYAAAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIRLGLQT 48
           SPYAAAKVAAHWYTVNYREAYGLFACNG+LFNHESPRRGENFVTRKITRAVGRI++GLQT
Sbjct: 185 SPYAAAKVAAHWYTVNYREAYGLFACNGVLFNHESPRRGENFVTRKITRAVGRIKVGLQT 244

Query: 47  KVFLGNLSAARDWGF 3
           KVFLGNLSAARDWGF
Sbjct: 245 KVFLGNLSAARDWGF 259


>gb|EAZ35764.1| hypothetical protein OsJ_20054 [Oryza sativa Japonica Group]
          Length = 285

 Score =  261 bits (666), Expect = 9e-68
 Identities = 125/135 (92%), Positives = 130/135 (96%)
 Frame = -1

Query: 407 VAVSFEIPDYTADVVATGALRLLEAVRCSPKPARYYQAGSSEMFGSTPPPQSESSPFHPR 228
           VAVSFE+PDYTADV ATGALRLLEAVR + K  RYYQAGSSEMFGSTPPPQSESSPFHPR
Sbjct: 35  VAVSFEVPDYTADVTATGALRLLEAVRLASKRIRYYQAGSSEMFGSTPPPQSESSPFHPR 94

Query: 227 SPYAAAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIRLGLQT 48
           SPYAAAKVAAHWYTVNYREAYGLFACNG+LFNHESPRRGENFVTRKITRAVGRI++GLQT
Sbjct: 95  SPYAAAKVAAHWYTVNYREAYGLFACNGVLFNHESPRRGENFVTRKITRAVGRIKVGLQT 154

Query: 47  KVFLGNLSAARDWGF 3
           KVFLGNLSAARDWGF
Sbjct: 155 KVFLGNLSAARDWGF 169


>ref|XP_004964482.1| PREDICTED: GDP-mannose 4,6 dehydratase 2-like [Setaria italica]
          Length = 371

 Score =  260 bits (665), Expect = 1e-67
 Identities = 124/135 (91%), Positives = 130/135 (96%)
 Frame = -1

Query: 407 VAVSFEIPDYTADVVATGALRLLEAVRCSPKPARYYQAGSSEMFGSTPPPQSESSPFHPR 228
           VAVSFEIPDYTADV ATGALRLLEAVR + KP RYYQAGSSEMFGSTPPPQSE +PFHPR
Sbjct: 121 VAVSFEIPDYTADVTATGALRLLEAVRLARKPIRYYQAGSSEMFGSTPPPQSEDTPFHPR 180

Query: 227 SPYAAAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIRLGLQT 48
           SPYAAAKVAAHWYTVNYREAYGLFACNG+LFNHESPRRGENFVTRKITRAVGRI++GLQT
Sbjct: 181 SPYAAAKVAAHWYTVNYREAYGLFACNGVLFNHESPRRGENFVTRKITRAVGRIKVGLQT 240

Query: 47  KVFLGNLSAARDWGF 3
           KVFLGNL+AARDWGF
Sbjct: 241 KVFLGNLTAARDWGF 255


>gb|EMS46760.1| GDP-mannose 4,6 dehydratase 2 [Triticum urartu]
          Length = 281

 Score =  260 bits (665), Expect = 1e-67
 Identities = 123/135 (91%), Positives = 131/135 (97%)
 Frame = -1

Query: 407 VAVSFEIPDYTADVVATGALRLLEAVRCSPKPARYYQAGSSEMFGSTPPPQSESSPFHPR 228
           VAVSFE+PDYTADV ATGALRLLEAVR S KP RYYQAGSSEMFGSTPPPQSE++PF+PR
Sbjct: 35  VAVSFEVPDYTADVTATGALRLLEAVRLSAKPMRYYQAGSSEMFGSTPPPQSETTPFYPR 94

Query: 227 SPYAAAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIRLGLQT 48
           SPYAAAKVAAHWYTVNYREAYGLFACNG+LFNHESPRRGENFVTRKITRA+GRI++GLQT
Sbjct: 95  SPYAAAKVAAHWYTVNYREAYGLFACNGVLFNHESPRRGENFVTRKITRAIGRIKVGLQT 154

Query: 47  KVFLGNLSAARDWGF 3
           KVFLGNLSAARDWGF
Sbjct: 155 KVFLGNLSAARDWGF 169


>gb|AFW85955.1| root cap-specific protein [Zea mays]
          Length = 371

 Score =  259 bits (663), Expect = 2e-67
 Identities = 123/135 (91%), Positives = 129/135 (95%)
 Frame = -1

Query: 407 VAVSFEIPDYTADVVATGALRLLEAVRCSPKPARYYQAGSSEMFGSTPPPQSESSPFHPR 228
           VAVSFE+PDYTADV ATGALRLLEAVR S +P RYYQAGSSEMFGSTPPPQ E +PFHPR
Sbjct: 121 VAVSFEVPDYTADVTATGALRLLEAVRLSRRPIRYYQAGSSEMFGSTPPPQGEDTPFHPR 180

Query: 227 SPYAAAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIRLGLQT 48
           SPYAAAKVAAHWYTVNYREAYG+FACNG+LFNHESPRRGENFVTRKITRAVGRI+LGLQT
Sbjct: 181 SPYAAAKVAAHWYTVNYREAYGVFACNGVLFNHESPRRGENFVTRKITRAVGRIKLGLQT 240

Query: 47  KVFLGNLSAARDWGF 3
           KVFLGNLSAARDWGF
Sbjct: 241 KVFLGNLSAARDWGF 255


>gb|EMS65992.1| GDP-mannose 4,6 dehydratase 2 [Triticum urartu]
          Length = 376

 Score =  259 bits (662), Expect = 3e-67
 Identities = 123/135 (91%), Positives = 130/135 (96%)
 Frame = -1

Query: 407 VAVSFEIPDYTADVVATGALRLLEAVRCSPKPARYYQAGSSEMFGSTPPPQSESSPFHPR 228
           VAVSFE+PDYTADV ATGALRLLEAVR S KP RY QAGSSEMFGSTPPPQSE++PFHPR
Sbjct: 126 VAVSFEVPDYTADVTATGALRLLEAVRLSSKPMRYSQAGSSEMFGSTPPPQSEATPFHPR 185

Query: 227 SPYAAAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIRLGLQT 48
           SPYAAAKVAAHWYTVNYREAYGLFACNG+LFNHESPRRGENFVTRKITRA+GRI++GLQT
Sbjct: 186 SPYAAAKVAAHWYTVNYREAYGLFACNGVLFNHESPRRGENFVTRKITRAIGRIKVGLQT 245

Query: 47  KVFLGNLSAARDWGF 3
           KVFLGNLSAARDWGF
Sbjct: 246 KVFLGNLSAARDWGF 260


>ref|XP_002436436.1| hypothetical protein SORBIDRAFT_10g002550 [Sorghum bicolor]
           gi|241914659|gb|EER87803.1| hypothetical protein
           SORBIDRAFT_10g002550 [Sorghum bicolor]
          Length = 374

 Score =  259 bits (662), Expect = 3e-67
 Identities = 123/135 (91%), Positives = 129/135 (95%)
 Frame = -1

Query: 407 VAVSFEIPDYTADVVATGALRLLEAVRCSPKPARYYQAGSSEMFGSTPPPQSESSPFHPR 228
           VAVSFE+PDYTADV ATGAL LLEAVR S KP RYYQAGSSEMFGSTPPPQSE +PFHPR
Sbjct: 124 VAVSFEVPDYTADVTATGALSLLEAVRLSRKPIRYYQAGSSEMFGSTPPPQSEDTPFHPR 183

Query: 227 SPYAAAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIRLGLQT 48
           SPYAA+KVAAHWYTVNYREAYG+FACNG+LFNHESPRRGENFVTRKITRAVGRI+LGLQT
Sbjct: 184 SPYAASKVAAHWYTVNYREAYGIFACNGVLFNHESPRRGENFVTRKITRAVGRIKLGLQT 243

Query: 47  KVFLGNLSAARDWGF 3
           KVFLGNLSAARDWGF
Sbjct: 244 KVFLGNLSAARDWGF 258


>gb|ACL54746.1| unknown [Zea mays]
          Length = 285

 Score =  258 bits (660), Expect = 4e-67
 Identities = 123/135 (91%), Positives = 129/135 (95%)
 Frame = -1

Query: 407 VAVSFEIPDYTADVVATGALRLLEAVRCSPKPARYYQAGSSEMFGSTPPPQSESSPFHPR 228
           VAVSFEIPDYTADV ATGALRLLEAVR S KP RYYQAGSSEMFGSTPPPQ E +PFHPR
Sbjct: 35  VAVSFEIPDYTADVTATGALRLLEAVRLSRKPMRYYQAGSSEMFGSTPPPQREDTPFHPR 94

Query: 227 SPYAAAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIRLGLQT 48
           SPYAAAKVAAHWYTVNYREAYG+FACNG+LFNHESPRRGENFVTRKITRAVGRI++GLQT
Sbjct: 95  SPYAAAKVAAHWYTVNYREAYGVFACNGVLFNHESPRRGENFVTRKITRAVGRIKVGLQT 154

Query: 47  KVFLGNLSAARDWGF 3
           +VFLGNLSAARDWGF
Sbjct: 155 RVFLGNLSAARDWGF 169


>ref|NP_001149057.1| GDP-mannose 4,6 dehydratase 2 [Zea mays]
           gi|195624368|gb|ACG34014.1| GDP-mannose 4,6 dehydratase
           2 [Zea mays]
          Length = 377

 Score =  258 bits (660), Expect = 4e-67
 Identities = 123/135 (91%), Positives = 129/135 (95%)
 Frame = -1

Query: 407 VAVSFEIPDYTADVVATGALRLLEAVRCSPKPARYYQAGSSEMFGSTPPPQSESSPFHPR 228
           VAVSFEIPDYTADV ATGALRLLEAVR S KP RYYQAGSSEMFGSTPPPQ E +PFHPR
Sbjct: 127 VAVSFEIPDYTADVTATGALRLLEAVRLSRKPMRYYQAGSSEMFGSTPPPQREDTPFHPR 186

Query: 227 SPYAAAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIRLGLQT 48
           SPYAAAKVAAHWYTVNYREAYG+FACNG+LFNHESPRRGENFVTRKITRAVGRI++GLQT
Sbjct: 187 SPYAAAKVAAHWYTVNYREAYGVFACNGVLFNHESPRRGENFVTRKITRAVGRIKVGLQT 246

Query: 47  KVFLGNLSAARDWGF 3
           +VFLGNLSAARDWGF
Sbjct: 247 RVFLGNLSAARDWGF 261


>gb|AAF70818.1| root cap-specific protein [Zea mays]
          Length = 377

 Score =  253 bits (647), Expect = 1e-65
 Identities = 121/135 (89%), Positives = 127/135 (94%)
 Frame = -1

Query: 407 VAVSFEIPDYTADVVATGALRLLEAVRCSPKPARYYQAGSSEMFGSTPPPQSESSPFHPR 228
           VAVSFEIP Y+ADV ATGALRLLEAVR S KP RYYQAGSSEMFGSTPPPQ E SPFHPR
Sbjct: 127 VAVSFEIPHYSADVTATGALRLLEAVRLSRKPMRYYQAGSSEMFGSTPPPQXEDSPFHPR 186

Query: 227 SPYAAAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIRLGLQT 48
           SPYAAAKVAAHWYTVNYREAYG+FACNG+LFNHESPRRGENFVTR ITRAVGRI++GLQT
Sbjct: 187 SPYAAAKVAAHWYTVNYREAYGVFACNGVLFNHESPRRGENFVTRNITRAVGRIKVGLQT 246

Query: 47  KVFLGNLSAARDWGF 3
           +VFLGNLSAARDWGF
Sbjct: 247 RVFLGNLSAARDWGF 261


>ref|XP_003612141.1| GDP-mannose 4 6-dehydratase [Medicago truncatula]
           gi|355513476|gb|AES95099.1| GDP-mannose 4 6-dehydratase
           [Medicago truncatula]
          Length = 369

 Score =  246 bits (629), Expect = 2e-63
 Identities = 120/140 (85%), Positives = 129/140 (92%), Gaps = 5/140 (3%)
 Frame = -1

Query: 407 VAVSFEIPDYTADVVATGALRLLEAVRC-----SPKPARYYQAGSSEMFGSTPPPQSESS 243
           VAVSFEIPDYTADVVATGALRLLEAVR           RYYQAGSSEMFGSTPPPQSE++
Sbjct: 114 VAVSFEIPDYTADVVATGALRLLEAVRSHIDATGRSHIRYYQAGSSEMFGSTPPPQSETT 173

Query: 242 PFHPRSPYAAAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIR 63
           PFHPRSPYAA+KVAAHWYTVNYREAYG+FACNGILFNHESPRRGENFVTRKITRAVGRI+
Sbjct: 174 PFHPRSPYAASKVAAHWYTVNYREAYGIFACNGILFNHESPRRGENFVTRKITRAVGRIK 233

Query: 62  LGLQTKVFLGNLSAARDWGF 3
           +GLQ+K+FLGNLSA+RDWGF
Sbjct: 234 IGLQSKLFLGNLSASRDWGF 253


>pdb|1N7G|A Chain A, Crystal Structure Of The Gdp-mannose 4,6-dehydratase
           Ternary Complex With Nadph And Gdp-rhamnose.
           gi|28373939|pdb|1N7G|B Chain B, Crystal Structure Of The
           Gdp-mannose 4,6-dehydratase Ternary Complex With Nadph
           And Gdp-rhamnose. gi|28373940|pdb|1N7G|C Chain C,
           Crystal Structure Of The Gdp-mannose 4,6-dehydratase
           Ternary Complex With Nadph And Gdp-rhamnose.
           gi|28373941|pdb|1N7G|D Chain D, Crystal Structure Of The
           Gdp-mannose 4,6-dehydratase Ternary Complex With Nadph
           And Gdp-rhamnose. gi|28373942|pdb|1N7H|A Chain A,
           Crystal Structure Of Gdp-Mannose 4,6-Dehydratase Ternary
           Complex With Nadph And Gdp gi|28373943|pdb|1N7H|B Chain
           B, Crystal Structure Of Gdp-Mannose 4,6-Dehydratase
           Ternary Complex With Nadph And Gdp
          Length = 381

 Score =  246 bits (628), Expect = 2e-63
 Identities = 119/139 (85%), Positives = 129/139 (92%), Gaps = 4/139 (2%)
 Frame = -1

Query: 407 VAVSFEIPDYTADVVATGALRLLEAVRC----SPKPARYYQAGSSEMFGSTPPPQSESSP 240
           VAVSFEIPDYTADVVATGALRLLEAVR     S +  +YYQAGSSEMFGSTPPPQSE++P
Sbjct: 119 VAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTP 178

Query: 239 FHPRSPYAAAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIRL 60
           FHPRSPYAA+K AAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRA+GRI++
Sbjct: 179 FHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKV 238

Query: 59  GLQTKVFLGNLSAARDWGF 3
           GLQTK+FLGNL A+RDWGF
Sbjct: 239 GLQTKLFLGNLQASRDWGF 257


>ref|NP_190685.2| GDP-mannose 4,6 dehydratase 2 [Arabidopsis thaliana]
           gi|82654938|sp|P93031.3|GMD2_ARATH RecName:
           Full=GDP-mannose 4,6 dehydratase 2; AltName:
           Full=GDP-D-mannose dehydratase 2; Short=GMD 2
           gi|1764100|gb|AAB51505.1| GDP-D-mannose-4,6-dehydratase
           [Arabidopsis thaliana] gi|106879167|gb|ABF82613.1|
           At3g51160 [Arabidopsis thaliana]
           gi|332645237|gb|AEE78758.1| GDP-mannose 4,6 dehydratase
           2 [Arabidopsis thaliana]
          Length = 373

 Score =  246 bits (628), Expect = 2e-63
 Identities = 119/139 (85%), Positives = 129/139 (92%), Gaps = 4/139 (2%)
 Frame = -1

Query: 407 VAVSFEIPDYTADVVATGALRLLEAVRC----SPKPARYYQAGSSEMFGSTPPPQSESSP 240
           VAVSFEIPDYTADVVATGALRLLEAVR     S +  +YYQAGSSEMFGSTPPPQSE++P
Sbjct: 119 VAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTP 178

Query: 239 FHPRSPYAAAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIRL 60
           FHPRSPYAA+K AAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRA+GRI++
Sbjct: 179 FHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKV 238

Query: 59  GLQTKVFLGNLSAARDWGF 3
           GLQTK+FLGNL A+RDWGF
Sbjct: 239 GLQTKLFLGNLQASRDWGF 257


>gb|AAM61140.1| GDP-D-mannose-4,6-dehydratase MUR1 [Arabidopsis thaliana]
          Length = 373

 Score =  246 bits (628), Expect = 2e-63
 Identities = 119/139 (85%), Positives = 129/139 (92%), Gaps = 4/139 (2%)
 Frame = -1

Query: 407 VAVSFEIPDYTADVVATGALRLLEAVRC----SPKPARYYQAGSSEMFGSTPPPQSESSP 240
           VAVSFEIPDYTADVVATGALRLLEAVR     S +  +YYQAGSSEMFGSTPPPQSE++P
Sbjct: 119 VAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTP 178

Query: 239 FHPRSPYAAAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIRL 60
           FHPRSPYAA+K AAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRA+GRI++
Sbjct: 179 FHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKV 238

Query: 59  GLQTKVFLGNLSAARDWGF 3
           GLQTK+FLGNL A+RDWGF
Sbjct: 239 GLQTKLFLGNLQASRDWGF 257


>ref|XP_002877790.1| GDP-mannose 4,6 dehydratase [Arabidopsis lyrata subsp. lyrata]
           gi|297323628|gb|EFH54049.1| GDP-mannose 4,6 dehydratase
           [Arabidopsis lyrata subsp. lyrata]
          Length = 376

 Score =  246 bits (628), Expect = 2e-63
 Identities = 119/139 (85%), Positives = 129/139 (92%), Gaps = 4/139 (2%)
 Frame = -1

Query: 407 VAVSFEIPDYTADVVATGALRLLEAVRC----SPKPARYYQAGSSEMFGSTPPPQSESSP 240
           VAVSFEIPDYTADVVATGALRLLEAVR     S +  +YYQAGSSEMFGSTPPPQSE++P
Sbjct: 122 VAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTP 181

Query: 239 FHPRSPYAAAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIRL 60
           FHPRSPYAA+K AAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRA+GRI++
Sbjct: 182 FHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKV 241

Query: 59  GLQTKVFLGNLSAARDWGF 3
           GLQTK+FLGNL A+RDWGF
Sbjct: 242 GLQTKLFLGNLQASRDWGF 260


>ref|XP_003612144.1| GDP-mannose 4 6-dehydratase [Medicago truncatula]
           gi|355513479|gb|AES95102.1| GDP-mannose 4 6-dehydratase
           [Medicago truncatula]
          Length = 369

 Score =  245 bits (625), Expect = 5e-63
 Identities = 119/140 (85%), Positives = 128/140 (91%), Gaps = 5/140 (3%)
 Frame = -1

Query: 407 VAVSFEIPDYTADVVATGALRLLEAVRC-----SPKPARYYQAGSSEMFGSTPPPQSESS 243
           VAVSFEIPDYTADVVATGALRLLEAVR           RYYQAGSSEMFGSTPPPQSE++
Sbjct: 114 VAVSFEIPDYTADVVATGALRLLEAVRSHIDATGRSHIRYYQAGSSEMFGSTPPPQSETT 173

Query: 242 PFHPRSPYAAAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIR 63
           PFHPRSPYAA+KVAAHWYTVNYREAYG+FACNGILFNHESPRRGENFVTRKITR VGRI+
Sbjct: 174 PFHPRSPYAASKVAAHWYTVNYREAYGIFACNGILFNHESPRRGENFVTRKITRVVGRIK 233

Query: 62  LGLQTKVFLGNLSAARDWGF 3
           +GLQ+K+FLGNLSA+RDWGF
Sbjct: 234 IGLQSKLFLGNLSASRDWGF 253


Top