BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00023789
         (1088 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III s...   147   6e-33
emb|CBI17549.3| unnamed protein product [Vitis vinifera]              147   6e-33
ref|XP_006366085.1| PREDICTED: uncharacterized protein LOC102595...   134   8e-29
ref|XP_006366082.1| PREDICTED: uncharacterized protein LOC102595...   134   8e-29
ref|XP_006355443.1| PREDICTED: DNA-directed RNA polymerase III s...   134   8e-29
ref|XP_006355442.1| PREDICTED: DNA-directed RNA polymerase III s...   134   8e-29
ref|XP_006355441.1| PREDICTED: DNA-directed RNA polymerase III s...   134   8e-29
gb|EMJ03134.1| hypothetical protein PRUPE_ppa002228mg [Prunus pe...   134   8e-29
ref|XP_004245771.1| PREDICTED: DNA-directed RNA polymerase III s...   134   8e-29
ref|XP_002310208.2| hypothetical protein POPTR_0007s12540g [Popu...   124   5e-26
ref|XP_004149158.1| PREDICTED: DNA-directed RNA polymerase III s...   124   5e-26
gb|ESW29064.1| hypothetical protein PHAVU_002G0404001g, partial ...   124   9e-26
ref|XP_004164787.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   124   9e-26
ref|XP_003611964.1| DNA-directed RNA polymerase III subunit RPC5...   120   9e-25
ref|XP_003589437.1| hypothetical protein MTR_1g024320 [Medicago ...   120   9e-25
gb|EOX91148.1| SIN-like family protein, putative isoform 1 [Theo...   118   5e-24
ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricin...   117   1e-23
ref|XP_006590438.1| PREDICTED: DNA-directed RNA polymerase III s...   115   2e-23
ref|XP_004300617.1| PREDICTED: DNA-directed RNA polymerase III s...   114   5e-23
ref|XP_006425717.1| hypothetical protein CICLE_v10025048mg [Citr...   111   6e-22

>ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Vitis
            vinifera]
          Length = 672

 Score =  147 bits (372), Expect = 6e-33
 Identities = 85/173 (49%), Positives = 110/173 (63%), Gaps = 1/173 (0%)
 Frame = +2

Query: 35   DGA-RGGKDKPVNTAMSTLSTETLEHLPKILLKIFQDQKIRSMNSVINGLRGLAISNSSR 211
            DGA R     PV    + +S ET E LPK L ++F+  K+ S   +   LR LA+S S+ 
Sbjct: 501  DGATRATNGTPVRR--TAMSAETREALPKALEEVFRLHKVCSFQLICQALRDLAVSKSTS 558

Query: 212  PREDPRTRAIINAATNGASAPVTELQAIVSQIAVDVHGVYILKSSGSSDFHRLRDVVIDL 391
            P+ DPRT     AA  GA AP  EL AI+S+ A  VHGVY+ K+S  S+ + LR VV+DL
Sbjct: 559  PKVDPRTFV---AAAYGADAPQEELHAIISKYATTVHGVYVWKTSEHSEHNPLRKVVVDL 615

Query: 392  FRGKEPNAKLNKQEIRIAAKTRLQKDITDSDYNQVIRELCDSSKGSWVLKSGD 550
            F GKEPNAKL + +I  AAK  L+K+IT  +YN+V+ ELC+S    WVLKSGD
Sbjct: 616  FCGKEPNAKLKRADIMEAAKIALKKEITTHEYNKVVSELCESRGSLWVLKSGD 668


>emb|CBI17549.3| unnamed protein product [Vitis vinifera]
          Length = 688

 Score =  147 bits (372), Expect = 6e-33
 Identities = 85/173 (49%), Positives = 110/173 (63%), Gaps = 1/173 (0%)
 Frame = +2

Query: 35   DGA-RGGKDKPVNTAMSTLSTETLEHLPKILLKIFQDQKIRSMNSVINGLRGLAISNSSR 211
            DGA R     PV    + +S ET E LPK L ++F+  K+ S   +   LR LA+S S+ 
Sbjct: 517  DGATRATNGTPVRR--TAMSAETREALPKALEEVFRLHKVCSFQLICQALRDLAVSKSTS 574

Query: 212  PREDPRTRAIINAATNGASAPVTELQAIVSQIAVDVHGVYILKSSGSSDFHRLRDVVIDL 391
            P+ DPRT     AA  GA AP  EL AI+S+ A  VHGVY+ K+S  S+ + LR VV+DL
Sbjct: 575  PKVDPRTFV---AAAYGADAPQEELHAIISKYATTVHGVYVWKTSEHSEHNPLRKVVVDL 631

Query: 392  FRGKEPNAKLNKQEIRIAAKTRLQKDITDSDYNQVIRELCDSSKGSWVLKSGD 550
            F GKEPNAKL + +I  AAK  L+K+IT  +YN+V+ ELC+S    WVLKSGD
Sbjct: 632  FCGKEPNAKLKRADIMEAAKIALKKEITTHEYNKVVSELCESRGSLWVLKSGD 684


>ref|XP_006366085.1| PREDICTED: uncharacterized protein LOC102595101 isoform X4 [Solanum
           tuberosum] gi|565401172|ref|XP_006366086.1| PREDICTED:
           uncharacterized protein LOC102595101 isoform X5 [Solanum
           tuberosum] gi|565401174|ref|XP_006366087.1| PREDICTED:
           uncharacterized protein LOC102595101 isoform X6 [Solanum
           tuberosum]
          Length = 387

 Score =  134 bits (336), Expect = 8e-29
 Identities = 72/168 (42%), Positives = 111/168 (66%), Gaps = 3/168 (1%)
 Frame = +2

Query: 56  DKPVNTAM--STLSTETLEHLPKILLKIFQDQKIRSMNSVINGLRGLAISNSSRPREDPR 229
           DKP ++++  +++S E  E LPK L ++F+  K+ S   +  GLR L +S S  P+  PR
Sbjct: 218 DKPTSSSLLRTSMSEEIREALPKALQEVFRTYKVCSFQQIRQGLRKLGVSKSYPPKGAPR 277

Query: 230 TRAIINAATNGASAPVTELQAIVSQIAVDVHGVYILKSSGSS-DFHRLRDVVIDLFRGKE 406
               I A+ +   AP  E+QA+++Q+AV++HGVY+LKSS  +  +  LR VVIDLF  + 
Sbjct: 278 KA--ITASIDVFDAPQEEIQAVINQVAVNIHGVYVLKSSPDNPQYDTLRKVVIDLFMAEG 335

Query: 407 PNAKLNKQEIRIAAKTRLQKDITDSDYNQVIRELCDSSKGSWVLKSGD 550
           P+AKL K  +  AAK +L +DIT+ ++ +V++ELC S K +WVL+SGD
Sbjct: 336 PSAKLKKASVTEAAKLQLNRDITNVEFLKVMKELCHSEKSAWVLRSGD 383


>ref|XP_006366082.1| PREDICTED: uncharacterized protein LOC102595101 isoform X1 [Solanum
           tuberosum] gi|565401166|ref|XP_006366083.1| PREDICTED:
           uncharacterized protein LOC102595101 isoform X2 [Solanum
           tuberosum] gi|565401168|ref|XP_006366084.1| PREDICTED:
           uncharacterized protein LOC102595101 isoform X3 [Solanum
           tuberosum]
          Length = 426

 Score =  134 bits (336), Expect = 8e-29
 Identities = 72/168 (42%), Positives = 111/168 (66%), Gaps = 3/168 (1%)
 Frame = +2

Query: 56  DKPVNTAM--STLSTETLEHLPKILLKIFQDQKIRSMNSVINGLRGLAISNSSRPREDPR 229
           DKP ++++  +++S E  E LPK L ++F+  K+ S   +  GLR L +S S  P+  PR
Sbjct: 257 DKPTSSSLLRTSMSEEIREALPKALQEVFRTYKVCSFQQIRQGLRKLGVSKSYPPKGAPR 316

Query: 230 TRAIINAATNGASAPVTELQAIVSQIAVDVHGVYILKSSGSS-DFHRLRDVVIDLFRGKE 406
               I A+ +   AP  E+QA+++Q+AV++HGVY+LKSS  +  +  LR VVIDLF  + 
Sbjct: 317 KA--ITASIDVFDAPQEEIQAVINQVAVNIHGVYVLKSSPDNPQYDTLRKVVIDLFMAEG 374

Query: 407 PNAKLNKQEIRIAAKTRLQKDITDSDYNQVIRELCDSSKGSWVLKSGD 550
           P+AKL K  +  AAK +L +DIT+ ++ +V++ELC S K +WVL+SGD
Sbjct: 375 PSAKLKKASVTEAAKLQLNRDITNVEFLKVMKELCHSEKSAWVLRSGD 422


>ref|XP_006355443.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like
           isoform X3 [Solanum tuberosum]
          Length = 577

 Score =  134 bits (336), Expect = 8e-29
 Identities = 72/168 (42%), Positives = 111/168 (66%), Gaps = 3/168 (1%)
 Frame = +2

Query: 56  DKPVNTAM--STLSTETLEHLPKILLKIFQDQKIRSMNSVINGLRGLAISNSSRPREDPR 229
           DKP ++++  +++S E  E LPK L ++F+  K+ S   +  GLR L +S S  P+  PR
Sbjct: 408 DKPTSSSLLRTSMSEEIREALPKALQEVFRTYKVCSFQQIRQGLRKLGVSKSYPPKGAPR 467

Query: 230 TRAIINAATNGASAPVTELQAIVSQIAVDVHGVYILKSSGSS-DFHRLRDVVIDLFRGKE 406
               I A+ +   AP  E+QA+++Q+AV++HGVY+LKSS  +  +  LR VVIDLF  + 
Sbjct: 468 KA--ITASIDVFDAPQEEIQAVINQVAVNIHGVYVLKSSPDNPQYDTLRKVVIDLFMAEG 525

Query: 407 PNAKLNKQEIRIAAKTRLQKDITDSDYNQVIRELCDSSKGSWVLKSGD 550
           P+AKL K  +  AAK +L +DIT+ ++ +V++ELC S K +WVL+SGD
Sbjct: 526 PSAKLKKASVTEAAKLQLNRDITNVEFLKVMKELCHSEKSAWVLRSGD 573


>ref|XP_006355442.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like
           isoform X2 [Solanum tuberosum]
          Length = 657

 Score =  134 bits (336), Expect = 8e-29
 Identities = 72/168 (42%), Positives = 111/168 (66%), Gaps = 3/168 (1%)
 Frame = +2

Query: 56  DKPVNTAM--STLSTETLEHLPKILLKIFQDQKIRSMNSVINGLRGLAISNSSRPREDPR 229
           DKP ++++  +++S E  E LPK L ++F+  K+ S   +  GLR L +S S  P+  PR
Sbjct: 488 DKPTSSSLLRTSMSEEIREALPKALQEVFRTYKVCSFQQIRQGLRKLGVSKSYPPKGAPR 547

Query: 230 TRAIINAATNGASAPVTELQAIVSQIAVDVHGVYILKSSGSS-DFHRLRDVVIDLFRGKE 406
               I A+ +   AP  E+QA+++Q+AV++HGVY+LKSS  +  +  LR VVIDLF  + 
Sbjct: 548 KA--ITASIDVFDAPQEEIQAVINQVAVNIHGVYVLKSSPDNPQYDTLRKVVIDLFMAEG 605

Query: 407 PNAKLNKQEIRIAAKTRLQKDITDSDYNQVIRELCDSSKGSWVLKSGD 550
           P+AKL K  +  AAK +L +DIT+ ++ +V++ELC S K +WVL+SGD
Sbjct: 606 PSAKLKKASVTEAAKLQLNRDITNVEFLKVMKELCHSEKSAWVLRSGD 653


>ref|XP_006355441.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like
           isoform X1 [Solanum tuberosum]
          Length = 669

 Score =  134 bits (336), Expect = 8e-29
 Identities = 72/168 (42%), Positives = 111/168 (66%), Gaps = 3/168 (1%)
 Frame = +2

Query: 56  DKPVNTAM--STLSTETLEHLPKILLKIFQDQKIRSMNSVINGLRGLAISNSSRPREDPR 229
           DKP ++++  +++S E  E LPK L ++F+  K+ S   +  GLR L +S S  P+  PR
Sbjct: 500 DKPTSSSLLRTSMSEEIREALPKALQEVFRTYKVCSFQQIRQGLRKLGVSKSYPPKGAPR 559

Query: 230 TRAIINAATNGASAPVTELQAIVSQIAVDVHGVYILKSSGSS-DFHRLRDVVIDLFRGKE 406
               I A+ +   AP  E+QA+++Q+AV++HGVY+LKSS  +  +  LR VVIDLF  + 
Sbjct: 560 KA--ITASIDVFDAPQEEIQAVINQVAVNIHGVYVLKSSPDNPQYDTLRKVVIDLFMAEG 617

Query: 407 PNAKLNKQEIRIAAKTRLQKDITDSDYNQVIRELCDSSKGSWVLKSGD 550
           P+AKL K  +  AAK +L +DIT+ ++ +V++ELC S K +WVL+SGD
Sbjct: 618 PSAKLKKASVTEAAKLQLNRDITNVEFLKVMKELCHSEKSAWVLRSGD 665


>gb|EMJ03134.1| hypothetical protein PRUPE_ppa002228mg [Prunus persica]
          Length = 698

 Score =  134 bits (336), Expect = 8e-29
 Identities = 69/157 (43%), Positives = 101/157 (64%), Gaps = 1/157 (0%)
 Frame = +2

Query: 83   TLSTETLEHLPKILLKIFQDQKIRSMNSVINGLRGLAISNSSRPREDPRTRAIINAATNG 262
            T+S ET   LP+ + ++  + K+ +   +  GLR LA+  SS P+ DP+T+ +I+AA  G
Sbjct: 539  TMSDETRAALPEAIKEVLHEHKVCNFRLICEGLRRLAVRKSSLPKVDPKTKRVIDAAY-G 597

Query: 263  ASAPVTELQAIVSQIAVDVHGVYILKSSGSSDFH-RLRDVVIDLFRGKEPNAKLNKQEIR 439
              AP  ELQ ++ Q+A D+HG+Y+LKSS     H RLR VVIDL   K PNAKL + E+ 
Sbjct: 598  VDAPQHELQKVICQVAADIHGLYVLKSSPEHSEHDRLRKVVIDLLCTKGPNAKLKRGEVF 657

Query: 440  IAAKTRLQKDITDSDYNQVIRELCDSSKGSWVLKSGD 550
             AAK  L++DI  ++YN+V+ + C     +W+LKSGD
Sbjct: 658  EAAKIALERDINTNEYNKVMNDFCVFKGSAWILKSGD 694


>ref|XP_004245771.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like
           [Solanum lycopersicum]
          Length = 669

 Score =  134 bits (336), Expect = 8e-29
 Identities = 71/168 (42%), Positives = 111/168 (66%), Gaps = 3/168 (1%)
 Frame = +2

Query: 56  DKPVNTAM--STLSTETLEHLPKILLKIFQDQKIRSMNSVINGLRGLAISNSSRPREDPR 229
           DKP ++++  +++S E  E LPK L ++F+  K+ S   +  GLR L +S S  P+  PR
Sbjct: 500 DKPTSSSLLRTSMSEEIREALPKALQEVFRTYKVCSFQQIRQGLRKLGVSKSYPPKGAPR 559

Query: 230 TRAIINAATNGASAPVTELQAIVSQIAVDVHGVYILKSSGSS-DFHRLRDVVIDLFRGKE 406
               I A+ +   AP  E+QA+++Q+AV++HGVY+LKSS  +  +  LR +VIDLF  + 
Sbjct: 560 KA--ITASVDVFDAPQEEIQAVINQVAVNIHGVYVLKSSPDNPQYDTLRKIVIDLFMAEG 617

Query: 407 PNAKLNKQEIRIAAKTRLQKDITDSDYNQVIRELCDSSKGSWVLKSGD 550
           P+AKL K  +  AAK +L +DIT+ ++ +V++ELC S K +WVL+SGD
Sbjct: 618 PSAKLKKASVTEAAKLQLNRDITNVEFLKVMKELCHSEKSAWVLRSGD 665


>ref|XP_002310208.2| hypothetical protein POPTR_0007s12540g [Populus trichocarpa]
            gi|550334731|gb|EEE90658.2| hypothetical protein
            POPTR_0007s12540g [Populus trichocarpa]
          Length = 667

 Score =  124 bits (312), Expect = 5e-26
 Identities = 75/176 (42%), Positives = 106/176 (60%), Gaps = 7/176 (3%)
 Frame = +2

Query: 44   RGGKDKPVNTAMS---TLSTETLEHLPKILLKIFQDQKI--RSMNSVINGLRGLAISNSS 208
            R GK    N       T++ ET E L K L K+ Q  K+       +  GLR LAIS S+
Sbjct: 491  RAGKSVSKNVITKPKKTMTDETREALRKALPKVLQTHKVCRYGFQMICQGLRQLAISQST 550

Query: 209  RPREDPRTRAIINAATNGASAPVTELQAIVSQIAVDVHGVYILKSSGSS-DFHRL-RDVV 382
             P+ DPR   I  AA +GA AP  ELQ ++S++A ++HG Y+LKSS    DF  L R VV
Sbjct: 551  LPKADPR---IAVAAASGAEAPPEELQEVISEVATNIHGFYVLKSSPEHPDFDPLSRKVV 607

Query: 383  IDLFRGKEPNAKLNKQEIRIAAKTRLQKDITDSDYNQVIRELCDSSKGSWVLKSGD 550
            I LF  + PNA + K E++ AA+  L+++ ++S+Y +V+ +LC+S   +WVLKSGD
Sbjct: 608  IGLFLARGPNANIKKSEVQAAARLELKREPSNSEYIKVMTDLCESKGSAWVLKSGD 663


>ref|XP_004149158.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Cucumis
            sativus]
          Length = 702

 Score =  124 bits (312), Expect = 5e-26
 Identities = 68/156 (43%), Positives = 96/156 (61%), Gaps = 1/156 (0%)
 Frame = +2

Query: 86   LSTETLEHLPKILLKIFQDQKIRSMNSVINGLRGLAISNSSRPREDPRTRAIINAATNGA 265
            +S ET E LPK L K+FQ+ K+ S   +  GLR LA+S S+ P+ D R      AA  G 
Sbjct: 546  MSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAV---AAAYGV 602

Query: 266  SAPVTELQAIVSQIAVDVHGVYILKSSGSS-DFHRLRDVVIDLFRGKEPNAKLNKQEIRI 442
             AP  EL+ I+SQ+A ++HG+Y+L SS    ++  LR VVI L RG+ P A L K ++  
Sbjct: 603  DAPPDELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKAVLKKADVLE 662

Query: 443  AAKTRLQKDITDSDYNQVIRELCDSSKGSWVLKSGD 550
            A+K  L + I  ++Y++V+ E+C S   SW LKSGD
Sbjct: 663  ASKHELGRAINSNEYSKVMNEICISHGSSWTLKSGD 698


>gb|ESW29064.1| hypothetical protein PHAVU_002G0404001g, partial [Phaseolus
           vulgaris]
          Length = 341

 Score =  124 bits (310), Expect = 9e-26
 Identities = 67/162 (41%), Positives = 98/162 (60%)
 Frame = +2

Query: 65  VNTAMSTLSTETLEHLPKILLKIFQDQKIRSMNSVINGLRGLAISNSSRPREDPRTRAII 244
           V+T   T+S ET   LP  L K+FQ  K+ S   +  GLR +A+S +   + D +   I 
Sbjct: 182 VSTGKMTMSNETRHALPIALKKLFQTNKVCSFKVICQGLREMAVSKAMLSKGDSK---IA 238

Query: 245 NAATNGASAPVTELQAIVSQIAVDVHGVYILKSSGSSDFHRLRDVVIDLFRGKEPNAKLN 424
             A +    P  EL A+++++A ++HG Y+LKSS    F   RDVVID+ RG  PNAKL 
Sbjct: 239 VDAAHSLDGPHNELMAVINEVACEIHGYYVLKSSQDDPF---RDVVIDMLRGSGPNAKLK 295

Query: 425 KQEIRIAAKTRLQKDITDSDYNQVIRELCDSSKGSWVLKSGD 550
           K EI  AA+ +L +++ +++YN+V+ ELC S    WVL+SGD
Sbjct: 296 KAEIVEAARRKLGREVPNNEYNKVMSELCVSKGSVWVLRSGD 337


>ref|XP_004164787.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III
            subunit RPC5-like [Cucumis sativus]
          Length = 702

 Score =  124 bits (310), Expect = 9e-26
 Identities = 68/156 (43%), Positives = 95/156 (60%), Gaps = 1/156 (0%)
 Frame = +2

Query: 86   LSTETLEHLPKILLKIFQDQKIRSMNSVINGLRGLAISNSSRPREDPRTRAIINAATNGA 265
            +S ET E LPK L K+FQ+ K+ S   +  GLR LA+S S+ P+ D R      AA  G 
Sbjct: 546  MSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAV---AAAYGV 602

Query: 266  SAPVTELQAIVSQIAVDVHGVYILKSSGSS-DFHRLRDVVIDLFRGKEPNAKLNKQEIRI 442
             AP  EL  I+SQ+A ++HG+Y+L SS    ++  LR VVI L RG+ P A L K ++  
Sbjct: 603  DAPPDELXKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKAVLKKADVLE 662

Query: 443  AAKTRLQKDITDSDYNQVIRELCDSSKGSWVLKSGD 550
            A+K  L + I  ++Y++V+ E+C S   SW LKSGD
Sbjct: 663  ASKHELGRAINSNEYSKVMNEICISHGSSWTLKSGD 698


>ref|XP_003611964.1| DNA-directed RNA polymerase III subunit RPC5 [Medicago truncatula]
           gi|358344405|ref|XP_003636280.1| DNA-directed RNA
           polymerase III subunit RPC5 [Medicago truncatula]
           gi|355502215|gb|AES83418.1| DNA-directed RNA polymerase
           III subunit RPC5 [Medicago truncatula]
           gi|355513299|gb|AES94922.1| DNA-directed RNA polymerase
           III subunit RPC5 [Medicago truncatula]
          Length = 683

 Score =  120 bits (301), Expect = 9e-25
 Identities = 68/167 (40%), Positives = 98/167 (58%)
 Frame = +2

Query: 50  GKDKPVNTAMSTLSTETLEHLPKILLKIFQDQKIRSMNSVINGLRGLAISNSSRPREDPR 229
           G+D P +    T+S+ET   LP  L K+FQ  K+ S   +   LRGLA++ +  P+   +
Sbjct: 522 GEDPPRSM---TMSSETRHALPIALKKLFQTHKVCSFQLICQELRGLALAQTMLPKGGSK 578

Query: 230 TRAIINAATNGASAPVTELQAIVSQIAVDVHGVYILKSSGSSDFHRLRDVVIDLFRGKEP 409
                  A N    P  EL+AI+ ++A D+HG Y+LKS+ +  F   RDVVID+ RG  P
Sbjct: 579 MSV---DAANSLDVPQDELKAILGEVACDIHGCYVLKSAQNDPF---RDVVIDMLRGSGP 632

Query: 410 NAKLNKQEIRIAAKTRLQKDITDSDYNQVIRELCDSSKGSWVLKSGD 550
           N KL K EI  AA+ +L +D+ +++Y + + ELC S    WVLKSGD
Sbjct: 633 NGKLKKAEILEAARRKLGRDVPNNEYIKAVSELCVSKGSFWVLKSGD 679


>ref|XP_003589437.1| hypothetical protein MTR_1g024320 [Medicago truncatula]
           gi|355478485|gb|AES59688.1| hypothetical protein
           MTR_1g024320 [Medicago truncatula]
          Length = 406

 Score =  120 bits (301), Expect = 9e-25
 Identities = 68/167 (40%), Positives = 98/167 (58%)
 Frame = +2

Query: 50  GKDKPVNTAMSTLSTETLEHLPKILLKIFQDQKIRSMNSVINGLRGLAISNSSRPREDPR 229
           G+D P +    T+S+ET   LP  L K+FQ  K+ S   +   LRGLA++ +  P+   +
Sbjct: 245 GEDPPRSM---TMSSETRHALPIALKKLFQTHKVCSFQLICQELRGLALAQTMLPKGGSK 301

Query: 230 TRAIINAATNGASAPVTELQAIVSQIAVDVHGVYILKSSGSSDFHRLRDVVIDLFRGKEP 409
                  A N    P  EL+AI+ ++A D+HG Y+LKS+ +  F   RDVVID+ RG  P
Sbjct: 302 MSV---DAANSLDVPQDELKAILGEVACDIHGCYVLKSAQNDPF---RDVVIDMLRGSGP 355

Query: 410 NAKLNKQEIRIAAKTRLQKDITDSDYNQVIRELCDSSKGSWVLKSGD 550
           N KL K EI  AA+ +L +D+ +++Y + + ELC S    WVLKSGD
Sbjct: 356 NGKLKKAEILEAARRKLGRDVPNNEYIKAVSELCVSKGSFWVLKSGD 402


>gb|EOX91148.1| SIN-like family protein, putative isoform 1 [Theobroma cacao]
          Length = 700

 Score =  118 bits (295), Expect = 5e-24
 Identities = 68/165 (41%), Positives = 105/165 (63%), Gaps = 2/165 (1%)
 Frame = +2

Query: 62   PVNTAMSTLSTETLEHLPKILLKIFQDQKIRSMNSVINGLRGLAISNSSRPREDPRTRAI 241
            P   A  T+S ET E +PK L K+FQ  K+ S+  +  GLR LA+S S+ P+ D R   +
Sbjct: 538  PAVQAGRTMSDETREAIPKALKKVFQTHKVCSLQLIRKGLRDLALSQSTLPKADAR---M 594

Query: 242  INAATNGASAPVTELQAIVSQIAVDVH-GVYILKSSGS-SDFHRLRDVVIDLFRGKEPNA 415
            +  A  GA AP  ELQ +VS++AV++H G+++L+SS    ++  LR+VVI+L R K    
Sbjct: 595  VVKAAYGADAPEHELQEVVSEVAVELHGGLFVLRSSPEHPEYDPLREVVINLLRVK---G 651

Query: 416  KLNKQEIRIAAKTRLQKDITDSDYNQVIRELCDSSKGSWVLKSGD 550
            KL K ++  AA   L+++I++++YN+V+ + C+     WVLKSGD
Sbjct: 652  KLKKADVSAAALLSLKREISNNEYNKVMSDFCEYKSSWWVLKSGD 696


>ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricinus communis]
           gi|223535571|gb|EEF37239.1| DNA-directed RNA polymerase,
           putative [Ricinus communis]
          Length = 677

 Score =  117 bits (292), Expect = 1e-23
 Identities = 63/140 (45%), Positives = 90/140 (64%), Gaps = 1/140 (0%)
 Frame = +2

Query: 80  STLSTETLEHLPKILLKIFQDQKIRSMNSVINGLRGLAISNSSRPREDPRTRAIINAATN 259
           +T++ ET E L K L K+FQ  K+ S   +  GLR LA+S S+ P+ DPR   I  AA +
Sbjct: 525 TTITVETREALLKALPKVFQSHKVCSFQLICQGLRDLAVSQSTLPKADPR---IAVAAAS 581

Query: 260 GASAPVTELQAIVSQIAVDVHGVYILKSSGS-SDFHRLRDVVIDLFRGKEPNAKLNKQEI 436
           GA AP  ELQ I+SQ+A ++HG Y+LKSS     +  LR V+IDL   + PNAKL K E+
Sbjct: 582 GADAPPEELQEIISQVATNIHGFYVLKSSPEHPQYDELRKVIIDLLLARGPNAKLKKAEV 641

Query: 437 RIAAKTRLQKDITDSDYNQV 496
             AA+   ++D+T+ +YN++
Sbjct: 642 FEAARLAFKRDVTNIEYNKL 661


>ref|XP_006590438.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Glycine
            max]
          Length = 697

 Score =  115 bits (289), Expect = 2e-23
 Identities = 66/162 (40%), Positives = 97/162 (59%)
 Frame = +2

Query: 65   VNTAMSTLSTETLEHLPKILLKIFQDQKIRSMNSVINGLRGLAISNSSRPREDPRTRAII 244
            V  A  T+S ET   LP  L K+FQ  K+ S   +  GLR +A+S +   + D  ++  +
Sbjct: 539  VPPAKMTMSNETRHALPIALKKLFQTHKVCSFKLICEGLREMAVSKAMLSKGD--SKMAV 596

Query: 245  NAATNGASAPVTELQAIVSQIAVDVHGVYILKSSGSSDFHRLRDVVIDLFRGKEPNAKLN 424
            +AA +    P  EL A++S++A +++G Y+LKSS    F   RDVVID+  G  PNAKL 
Sbjct: 597  DAA-HSLDGPHNELMAVISEVACEINGSYVLKSSPDDPF---RDVVIDMLCGSGPNAKLK 652

Query: 425  KQEIRIAAKTRLQKDITDSDYNQVIRELCDSSKGSWVLKSGD 550
            K EI  AA+ +L +++  ++Y +V+ ELC S    WVLKSGD
Sbjct: 653  KAEILEAARRKLGREVASNEYTKVMSELCVSKGSVWVLKSGD 694


>ref|XP_004300617.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like
            [Fragaria vesca subsp. vesca]
          Length = 685

 Score =  114 bits (286), Expect = 5e-23
 Identities = 67/185 (36%), Positives = 110/185 (59%), Gaps = 5/185 (2%)
 Frame = +2

Query: 11   SGKRAKVVDGARGGKDKPVNTAMS----TLSTETLEHLPKILLKIFQDQKIRSMNSVING 178
            S K  K+ +  +G  +K  + A S    T+S ETL  LP+ + ++F+ +K+ S   + + 
Sbjct: 500  SSKTGKLPNSDKG-PNKSASGAPSGGVRTMSDETLAVLPQAIKEVFKTRKVCSFQLICDT 558

Query: 179  LRGLAISNSSRPREDPRTRAIINAATNGASAPVTELQAIVSQIAVDVHGVYILKSSGSSD 358
            L  + +  S   + DP +R +  A  NG +AP  EL+ +++Q AV++ GVY+LKSS    
Sbjct: 559  LGNMTLERSQHAKVDPNSRKL-TAVRNGLAAPPEELKNVITQFAVEIGGVYVLKSSSEHP 617

Query: 359  FH-RLRDVVIDLFRGKEPNAKLNKQEIRIAAKTRLQKDITDSDYNQVIRELCDSSKGSWV 535
             H +LRDVVI L +GK     + K ++ +AA+  L ++I++++YN+V+ ELC S    W 
Sbjct: 618  EHDQLRDVVIKLLQGKN-KGPIKKLDVTVAAQEELGREISNNEYNKVMNELCVSKGSQWY 676

Query: 536  LKSGD 550
            LKSGD
Sbjct: 677  LKSGD 681


>ref|XP_006425717.1| hypothetical protein CICLE_v10025048mg [Citrus clementina]
            gi|568824759|ref|XP_006466762.1| PREDICTED: DNA-directed
            RNA polymerase III subunit RPC5-like [Citrus sinensis]
            gi|557527707|gb|ESR38957.1| hypothetical protein
            CICLE_v10025048mg [Citrus clementina]
          Length = 690

 Score =  111 bits (277), Expect = 6e-22
 Identities = 60/175 (34%), Positives = 98/175 (56%)
 Frame = +2

Query: 17   KRAKVVDGARGGKDKPVNTAMSTLSTETLEHLPKILLKIFQDQKIRSMNSVINGLRGLAI 196
            K  K ++ + G       T    LS E+ E LPK L K+FQ  K+ S+  +  GLR LAI
Sbjct: 515  KHLKAINSSNGPSG--ALTGNKNLSNESREALPKALQKLFQIHKVCSLPLIKQGLRDLAI 572

Query: 197  SNSSRPREDPRTRAIINAATNGASAPVTELQAIVSQIAVDVHGVYILKSSGSSDFHRLRD 376
            S S+ P+ D R   +     + +     E   ++SQ+A ++HG Y+ KSS       LR 
Sbjct: 573  SQSTLPKADARMTVLAAEIVDSSFVDTQEFAEVISQVATNIHGFYVSKSSEDPQHGPLRK 632

Query: 377  VVIDLFRGKEPNAKLNKQEIRIAAKTRLQKDITDSDYNQVIRELCDSSKGSWVLK 541
            VV DL     P+AKL K ++  AA+  L+++I++++Y++V+ ++C+S   +W+LK
Sbjct: 633  VVTDLLLAGGPDAKLKKADVVEAARHVLKREISNAEYSKVMSDICESKGSAWILK 687