BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00023727
         (484 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281132.1| PREDICTED: pentatricopeptide repeat-containi...   158   8e-37
gb|EMJ01003.1| hypothetical protein PRUPE_ppa004794mg [Prunus pe...   154   2e-35
ref|XP_006423153.1| hypothetical protein CICLE_v10028281mg [Citr...   150   2e-34
gb|EOX97215.1| Tetratricopeptide repeat (TPR)-like superfamily p...   148   6e-34
ref|XP_002306075.1| pentatricopeptide repeat-containing family p...   148   6e-34
ref|XP_006856168.1| hypothetical protein AMTR_s00059p00176060 [A...   148   8e-34
ref|XP_004507432.1| PREDICTED: pentatricopeptide repeat-containi...   145   4e-33
ref|XP_002519113.1| pentatricopeptide repeat-containing protein,...   144   1e-32
ref|XP_004289840.1| PREDICTED: pentatricopeptide repeat-containi...   142   6e-32
gb|EXB63632.1| hypothetical protein L484_026974 [Morus notabilis]     141   1e-31
ref|XP_003575558.1| PREDICTED: pentatricopeptide repeat-containi...   140   1e-31
ref|NP_179197.1| pentatricopeptide repeat-containing protein [Ar...   139   5e-31
ref|XP_003537906.1| PREDICTED: pentatricopeptide repeat-containi...   135   6e-30
ref|XP_006349623.1| PREDICTED: pentatricopeptide repeat-containi...   134   1e-29
gb|EMT27798.1| hypothetical protein F775_17674 [Aegilops tauschii]    134   1e-29
ref|XP_004248897.1| PREDICTED: pentatricopeptide repeat-containi...   134   2e-29
ref|XP_004161634.1| PREDICTED: pentatricopeptide repeat-containi...   132   5e-29
ref|XP_004145397.1| PREDICTED: pentatricopeptide repeat-containi...   131   8e-29
dbj|BAJ94152.1| predicted protein [Hordeum vulgare subsp. vulgare]    131   8e-29
gb|EMS46297.1| hypothetical protein TRIUR3_16619 [Triticum urartu]    129   3e-28

>ref|XP_002281132.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15980-like [Vitis vinifera]
          Length = 492

 Score =  158 bits (399), Expect = 8e-37
 Identities = 77/165 (46%), Positives = 112/165 (67%), Gaps = 6/165 (3%)
 Frame = +2

Query: 8   GSDAGFQVYSQIFKP------QAVCHGVSMKVRVSPNPGTFNTLLLALYREGNMEKSIKI 169
           G DAG+++Y ++F        + V   V ++VRV PN  TFN L++  YR+G +EK  +I
Sbjct: 208 GCDAGYEIYREVFGSWDDEINEKVRVRVRVRVRVCPNVHTFNALMVCFYRDGGVEKVEEI 267

Query: 170 RNEMETFGCDPTVFTYSILMSGFCDEGMMQDAKKLWEEMVTKGIKPDIVAFNTLIGGHCR 349
             EM  + C+P  ++YS+LM+ FCDEG M + +KLWEEM  K ++ DI+A+NT+IGG CR
Sbjct: 268 WAEMGEWDCNPNAYSYSVLMAAFCDEGRMGEVEKLWEEMRMKKMEHDIMAYNTIIGGFCR 327

Query: 350 AGEMEAAEDLYRNMTLTEIEPTVTTFEHLIGGHSKAGCVDSALLL 484
            GE+E  E+L+R M L+ I+ T  T+EHLI G+ + G VDSA+LL
Sbjct: 328 IGEIERGEELFREMELSGIQSTCVTYEHLINGYCEIGDVDSAVLL 372



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 34/102 (33%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
 Frame = +2

Query: 107 TFNTLLLALYREGNMEKSIKI-RNEMETFGCDPTVFTYSILMSGFCDEGMMQDAKKLWEE 283
           T + ++L L     + +++K+ R  M      P   +Y  L+ GFC+EG M++A KL  E
Sbjct: 387 TVDGMILLLCNNRRVHEALKLLRVAMGNVEFAPRGKSYETLIKGFCEEGKMEEASKLQSE 446

Query: 284 MVTKGIKPDIVAFNTLIGGHCRAGEMEAAEDLYRNMTLTEIE 409
           MV KG KP +  ++  I G+ + G  E AE L + M  T+++
Sbjct: 447 MVGKGFKPTLEIYSAFIDGYMKQGNKEIAETLRKEMFETQMQ 488


>gb|EMJ01003.1| hypothetical protein PRUPE_ppa004794mg [Prunus persica]
          Length = 491

 Score =  154 bits (388), Expect = 2e-35
 Identities = 73/161 (45%), Positives = 111/161 (68%), Gaps = 2/161 (1%)
 Frame = +2

Query: 8   GSDAGFQVYSQIF--KPQAVCHGVSMKVRVSPNPGTFNTLLLALYREGNMEKSIKIRNEM 181
           G+ AG+++Y +IF    + + H V    R+SPN  TFN L+L  YR+G +EK  +I ++M
Sbjct: 214 GAYAGYEIYREIFGLDCEVLEHNVKRVARISPNVETFNALMLGFYRDGLVEKVKEIWDQM 273

Query: 182 ETFGCDPTVFTYSILMSGFCDEGMMQDAKKLWEEMVTKGIKPDIVAFNTLIGGHCRAGEM 361
               C P  ++YSILM+ +C++  M +A+++WEEM  KG++PD+VA+NT+IGG CR GE+
Sbjct: 274 ADLNCCPNGYSYSILMAAYCEQEKMNEAEEVWEEMRAKGLEPDVVAYNTMIGGFCRVGEI 333

Query: 362 EAAEDLYRNMTLTEIEPTVTTFEHLIGGHSKAGCVDSALLL 484
           E AE+  + M L+ IE T  T+EHLI G+ K G +D+A+LL
Sbjct: 334 EMAEEFSKEMGLSGIESTDATYEHLITGYCKMGNLDAAMLL 374



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
 Frame = +2

Query: 95  PNPGTFNTLLLALYREGNMEKSIKI-RNEMETFGCDPTVFTYSILMSGFCDEGMMQDAKK 271
           P   T ++L+  L  E  + ++ ++ R  +  FG  PT  +Y  L+ G C+E  +++A K
Sbjct: 385 PEGSTMDSLIRGLCDESRVLEAFEVMRGAVVHFGFCPTEKSYEFLIRGLCEEEKLEEALK 444

Query: 272 LWEEMVTKGIKPDIVAFNTLIGGHCRAGEMEAAEDLYRNM 391
           L  EMV KG KP+   ++  I G+ + G  E AE L   M
Sbjct: 445 LQAEMVGKGFKPNSEIYSAFISGYMKQGNKEVAERLRNEM 484



 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 37/133 (27%), Positives = 67/133 (50%), Gaps = 1/133 (0%)
 Frame = +2

Query: 89  VSPNPGTFNTLLLALYREGNMEKSIKIRNEMETFGCDPTVFTYSILMSGFCDEGMMQDAK 268
           + P+   +NT++    R G +E + +   EM   G + T  TY  L++G+C  G +  A 
Sbjct: 313 LEPDVVAYNTMIGGFCRVGEIEMAEEFSKEMGLSGIESTDATYEHLITGYCKMGNLDAAM 372

Query: 269 KLWEEMVTKGIKPDIVAFNTLIGGHC-RAGEMEAAEDLYRNMTLTEIEPTVTTFEHLIGG 445
            L+++M+ K  +P+    ++LI G C  +  +EA E +   +      PT  ++E LI G
Sbjct: 373 LLYKDMLRKDFRPEGSTMDSLIRGLCDESRVLEAFEVMRGAVVHFGFCPTEKSYEFLIRG 432

Query: 446 HSKAGCVDSALLL 484
             +   ++ AL L
Sbjct: 433 LCEEEKLEEALKL 445


>ref|XP_006423153.1| hypothetical protein CICLE_v10028281mg [Citrus clementina]
           gi|567861000|ref|XP_006423154.1| hypothetical protein
           CICLE_v10028281mg [Citrus clementina]
           gi|567861002|ref|XP_006423155.1| hypothetical protein
           CICLE_v10028281mg [Citrus clementina]
           gi|568851351|ref|XP_006479357.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g15980-like isoform X1 [Citrus sinensis]
           gi|568851353|ref|XP_006479358.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g15980-like isoform X2 [Citrus sinensis]
           gi|557525087|gb|ESR36393.1| hypothetical protein
           CICLE_v10028281mg [Citrus clementina]
           gi|557525088|gb|ESR36394.1| hypothetical protein
           CICLE_v10028281mg [Citrus clementina]
           gi|557525089|gb|ESR36395.1| hypothetical protein
           CICLE_v10028281mg [Citrus clementina]
          Length = 494

 Score =  150 bits (378), Expect = 2e-34
 Identities = 72/164 (43%), Positives = 106/164 (64%), Gaps = 5/164 (3%)
 Frame = +2

Query: 8   GSDAGFQVYSQIF-----KPQAVCHGVSMKVRVSPNPGTFNTLLLALYREGNMEKSIKIR 172
           G  +G+++Y ++F         +   V   VRV PN  TFN L++  YREG  EK   + 
Sbjct: 211 GVISGYEIYREVFGLDSDATAGIGKDVKRVVRVRPNVHTFNALMVGFYREGAFEKVEDVW 270

Query: 173 NEMETFGCDPTVFTYSILMSGFCDEGMMQDAKKLWEEMVTKGIKPDIVAFNTLIGGHCRA 352
            EM   GC+P  ++YS+LM+ FC+E  M++A+KLWEEM  K ++ D+VA+NT+IGG C  
Sbjct: 271 VEMARLGCEPDCYSYSVLMAVFCEERRMREAEKLWEEMRDKNVEHDVVAYNTIIGGFCEI 330

Query: 353 GEMEAAEDLYRNMTLTEIEPTVTTFEHLIGGHSKAGCVDSALLL 484
           GEM  AE+ +R M L+ +E +  TFEHL+ G+ +AG VDSA+L+
Sbjct: 331 GEMPRAEEFFREMGLSGVESSSVTFEHLVNGYCRAGDVDSAILV 374



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 37/127 (29%), Positives = 63/127 (49%), Gaps = 1/127 (0%)
 Frame = +2

Query: 107 TFNTLLLALYREGNMEKSIKIRNEMETFGCDPTVFTYSILMSGFCDEGMMQDAKKLWEEM 286
           TF  L+    R G+++ +I + N+M   G +P   T  +L+   CD+  + +A  + +  
Sbjct: 354 TFEHLVNGYCRAGDVDSAILVYNDMCRKGFEPEGSTIEVLIGELCDKRRVFEALDILKAR 413

Query: 287 VTK-GIKPDIVAFNTLIGGHCRAGEMEAAEDLYRNMTLTEIEPTVTTFEHLIGGHSKAGC 463
           V K G+ P   ++  LI G C  G+ME A  +   M     EP++  +   I G+ K G 
Sbjct: 414 VVKFGLFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSSFIDGYMKEGN 473

Query: 464 VDSALLL 484
           V+ A +L
Sbjct: 474 VEMATML 480



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
 Frame = +2

Query: 95  PNPGTFNTLLLALYREGNMEKSIKI-RNEMETFGCDPTVFTYSILMSGFCDEGMMQDAKK 271
           P   T   L+  L  +  + +++ I +  +  FG  PT  +Y  L+ G C+EG M++A K
Sbjct: 385 PEGSTIEVLIGELCDKRRVFEALDILKARVVKFGLFPTEKSYMFLIKGLCEEGKMEEALK 444

Query: 272 LWEEMVTKGIKPDIVAFNTLIGGHCRAGEMEAAEDLYRNM 391
           +  EMV KG +P +  +++ I G+ + G +E A  L + M
Sbjct: 445 VQAEMVGKGFEPSLEIYSSFIDGYMKEGNVEMATMLRKEM 484


>gb|EOX97215.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
           isoform 1 [Theobroma cacao] gi|508705320|gb|EOX97216.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein,
           putative isoform 1 [Theobroma cacao]
           gi|508705321|gb|EOX97217.1| Tetratricopeptide repeat
           (TPR)-like superfamily protein, putative isoform 1
           [Theobroma cacao]
          Length = 490

 Score =  148 bits (374), Expect = 6e-34
 Identities = 73/164 (44%), Positives = 111/164 (67%), Gaps = 5/164 (3%)
 Frame = +2

Query: 8   GSDAGFQVYSQIFKPQAVCHG-----VSMKVRVSPNPGTFNTLLLALYREGNMEKSIKIR 172
           G+  G++VY ++F    V +G     V   ++V PN  TFN L+L  YREG +EK  ++ 
Sbjct: 210 GAKRGYEVYKEVF---GVGNGERESNVKRVLKVRPNVHTFNALMLCFYREGLLEKVEEVW 266

Query: 173 NEMETFGCDPTVFTYSILMSGFCDEGMMQDAKKLWEEMVTKGIKPDIVAFNTLIGGHCRA 352
           +EME+ GC    ++YS+LM+  C+EG +++A++LWEEM  KG++PDIVA+NT+IGG C+ 
Sbjct: 267 SEMESLGCVANGYSYSVLMAALCEEGKVREAEELWEEMRVKGLEPDIVAYNTMIGGFCKH 326

Query: 353 GEMEAAEDLYRNMTLTEIEPTVTTFEHLIGGHSKAGCVDSALLL 484
           GE+  AE+LYR M L  I+ T  T+E+LI G+ K   + SA+L+
Sbjct: 327 GEIMRAEELYREMGLNGIQATCVTYENLINGYCKVADIYSAMLI 370


>ref|XP_002306075.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222849039|gb|EEE86586.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 498

 Score =  148 bits (374), Expect = 6e-34
 Identities = 73/161 (45%), Positives = 109/161 (67%), Gaps = 2/161 (1%)
 Frame = +2

Query: 8   GSDAGFQVYSQIFKPQAVCHGVSMK--VRVSPNPGTFNTLLLALYREGNMEKSIKIRNEM 181
           GS  G+ V+ ++F  ++   G  M+   RV PN  +FN L++  YR G +E   +I +EM
Sbjct: 214 GSFVGYGVFKEVFGLESCELGEKMRRGFRVRPNVHSFNELMVGFYRNGEVEMVEEIWSEM 273

Query: 182 ETFGCDPTVFTYSILMSGFCDEGMMQDAKKLWEEMVTKGIKPDIVAFNTLIGGHCRAGEM 361
           E FGC    F+Y +L++ FC+ G + +A++LW+EM  KGI PD+VA+NT+IGG C+AGE+
Sbjct: 274 ERFGCVANGFSYGVLIAVFCEGGRLSEAERLWDEMRVKGIMPDVVAYNTIIGGFCKAGEV 333

Query: 362 EAAEDLYRNMTLTEIEPTVTTFEHLIGGHSKAGCVDSALLL 484
           E AE L+R M L+ IE +  TFEHLI G+ + G V+SA+L+
Sbjct: 334 EKAEGLFREMGLSGIESSCVTFEHLIEGYCRIGDVNSAILV 374



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
 Frame = +2

Query: 107 TFNTLLLALYREGNMEKSIKI-RNEMETFGCDPTVFTYSILMSGFCDEGMMQDAKKLWEE 283
           T   L+  L  +  + +++KI R+ M      P   +Y +L++G C++G M++A KL  E
Sbjct: 389 TMEVLIGGLCEQKRVFEALKIMRSAMRDVSFHPNGKSYELLINGLCEDGKMEEALKLQSE 448

Query: 284 MVTKGIKPDIVAFNTLIGGHCRAGEMEAAEDLYRNMTLTE 403
           MV KG  P+   +   I G+ + G  E A  L + M++ +
Sbjct: 449 MVGKGFDPNSAIYGAFIEGYVKLGNEEMAAMLRKEMSVAQ 488


>ref|XP_006856168.1| hypothetical protein AMTR_s00059p00176060 [Amborella trichopoda]
           gi|548860027|gb|ERN17635.1| hypothetical protein
           AMTR_s00059p00176060 [Amborella trichopoda]
          Length = 511

 Score =  148 bits (373), Expect = 8e-34
 Identities = 69/161 (42%), Positives = 104/161 (64%)
 Frame = +2

Query: 2   ANGSDAGFQVYSQIFKPQAVCHGVSMKVRVSPNPGTFNTLLLALYREGNMEKSIKIRNEM 181
           + GS+ G   + +IF  +        +    PN  TFNTL+LALYREG +E+   + +EM
Sbjct: 237 SKGSNEGLSFFKEIFGNET-----RFRAGSCPNIQTFNTLILALYREGKLERENLLFDEM 291

Query: 182 ETFGCDPTVFTYSILMSGFCDEGMMQDAKKLWEEMVTKGIKPDIVAFNTLIGGHCRAGEM 361
               C P  F+Y++L++ +C++  +++A +LW+ M+ +G+ PDIVA+NTLIGG+C  G++
Sbjct: 292 SKMDCKPNTFSYNVLIAAYCEKRKLEEAVELWDGMLERGLTPDIVAYNTLIGGYCDIGDI 351

Query: 362 EAAEDLYRNMTLTEIEPTVTTFEHLIGGHSKAGCVDSALLL 484
             AE +YR MT+  I PT  T+EHLI GH K+G  D ALLL
Sbjct: 352 NHAEAMYREMTINGISPTCLTYEHLIHGHCKSGSADEALLL 392


>ref|XP_004507432.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15980-like [Cicer arietinum]
          Length = 305

 Score =  145 bits (367), Expect = 4e-33
 Identities = 70/164 (42%), Positives = 110/164 (67%), Gaps = 5/164 (3%)
 Frame = +2

Query: 8   GSDAGFQVYSQIF-----KPQAVCHGVSMKVRVSPNPGTFNTLLLALYREGNMEKSIKIR 172
           G DAG+++Y + F     K +    G   +V V+PN  T+NTL+L  Y++G +EK  +I 
Sbjct: 26  GVDAGYEIYREFFRLDVEKCEIPKRGSGFRV-VTPNVHTYNTLMLCCYQDGLLEKVEEIW 84

Query: 173 NEMETFGCDPTVFTYSILMSGFCDEGMMQDAKKLWEEMVTKGIKPDIVAFNTLIGGHCRA 352
           NEM    C P  ++YS+LM+ FC+ G + DA +LW+EM  +G++PD++++NT+IGG C+ 
Sbjct: 85  NEMGQISCVPNAYSYSLLMAAFCEGGKIGDADELWKEMRKEGMEPDVISYNTMIGGFCKV 144

Query: 353 GEMEAAEDLYRNMTLTEIEPTVTTFEHLIGGHSKAGCVDSALLL 484
           G++  AED +R M L  I+ T +T+EHL+ G+ K G VDSA+L+
Sbjct: 145 GDVGRAEDFFREMGLAGIDATGSTYEHLVKGYCKIGDVDSAVLV 188



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 35/106 (33%), Positives = 57/106 (53%), Gaps = 1/106 (0%)
 Frame = +2

Query: 95  PNPGTFNTLLLALYREGNMEKSIKI-RNEMETFGCDPTVFTYSILMSGFCDEGMMQDAKK 271
           P+  T + ++  L  +G +E++I+  R+ +  F   P   +Y  L+ G C EG M++A K
Sbjct: 199 PDALTLDMMVRLLCDKGRVEEAIEFFRSGVGKFDLVPKEKSYETLIKGLCFEGRMEEALK 258

Query: 272 LWEEMVTKGIKPDIVAFNTLIGGHCRAGEMEAAEDLYRNMTLTEIE 409
           L  EMV KG +P    +   I G+ R G  E AE L + M  T+++
Sbjct: 259 LQAEMVGKGFQPKSEIYEAFIDGYIRQGNEEMAEALRKEMLQTQMQ 304



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 35/136 (25%), Positives = 69/136 (50%), Gaps = 1/136 (0%)
 Frame = +2

Query: 80  KVRVSPNPGTFNTLLLALYREGNMEKSIKIRNEMETFGCDPTVFTYSILMSGFCDEGMMQ 259
           K  + P+  ++NT++    + G++ ++     EM   G D T  TY  L+ G+C  G + 
Sbjct: 124 KEGMEPDVISYNTMIGGFCKVGDVGRAEDFFREMGLAGIDATGSTYEHLVKGYCKIGDVD 183

Query: 260 DAKKLWEEMVTKGIKPDIVAFNTLIGGHCRAGEMEAAEDLYRN-MTLTEIEPTVTTFEHL 436
            A  ++++M  K  +PD +  + ++   C  G +E A + +R+ +   ++ P   ++E L
Sbjct: 184 SAVLVYKDMCRKAFRPDALTLDMMVRLLCDKGRVEEAIEFFRSGVGKFDLVPKEKSYETL 243

Query: 437 IGGHSKAGCVDSALLL 484
           I G    G ++ AL L
Sbjct: 244 IKGLCFEGRMEEALKL 259


>ref|XP_002519113.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223541776|gb|EEF43324.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 486

 Score =  144 bits (363), Expect = 1e-32
 Identities = 72/159 (45%), Positives = 103/159 (64%)
 Frame = +2

Query: 8   GSDAGFQVYSQIFKPQAVCHGVSMKVRVSPNPGTFNTLLLALYREGNMEKSIKIRNEMET 187
           G  AG+ V+ ++F+     +     ++V PN  TFN L++  YR+G +E   ++ +EME 
Sbjct: 210 GCYAGYGVFREVFEVND--NEGKRVIKVRPNVHTFNELMMGFYRDGELEMVEEVWSEMER 267

Query: 188 FGCDPTVFTYSILMSGFCDEGMMQDAKKLWEEMVTKGIKPDIVAFNTLIGGHCRAGEMEA 367
           F C P  F+YS+LM+ F D G  ++ +KLWEEM  KGIK D+VA+NT+IGG C+ GE+E 
Sbjct: 268 FECVPNGFSYSVLMTVFLDVGRTKEIEKLWEEMRAKGIKGDVVAYNTVIGGFCKIGEIEK 327

Query: 368 AEDLYRNMTLTEIEPTVTTFEHLIGGHSKAGCVDSALLL 484
           AE+L R M L  +E    TFEHLI G+   G VDSA+L+
Sbjct: 328 AEELSREMELNGVEANCVTFEHLINGYCSVGDVDSAILV 366



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 1/126 (0%)
 Frame = +2

Query: 110 FNTLLLALYREGNMEKSIKIRNEMETFGCDPTVFTYSILMSGFCDEGMMQDAKKLWEEMV 289
           +NT++    + G +EK+ ++  EME  G +    T+  L++G+C  G +  A  +++ MV
Sbjct: 312 YNTVIGGFCKIGEIEKAEELSREMELNGVEANCVTFEHLINGYCSVGDVDSAILVFKHMV 371

Query: 290 TKGIKPDIVAFNTLIGGHCRAGEMEAAEDLYR-NMTLTEIEPTVTTFEHLIGGHSKAGCV 466
            KG + +    + LIGG C    +  A ++ R  M       +  ++E LI G  K G +
Sbjct: 372 RKGFRAEGSVMDVLIGGLCEKRRVSEALEIMRIAMRNDGFRLSGKSYELLIKGLCKDGKM 431

Query: 467 DSALLL 484
           D AL L
Sbjct: 432 DEALKL 437


>ref|XP_004289840.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15980-like [Fragaria vesca subsp. vesca]
          Length = 493

 Score =  142 bits (357), Expect = 6e-32
 Identities = 68/161 (42%), Positives = 105/161 (65%), Gaps = 2/161 (1%)
 Frame = +2

Query: 8   GSDAGFQVYSQIF--KPQAVCHGVSMKVRVSPNPGTFNTLLLALYREGNMEKSIKIRNEM 181
           G+ AG+++Y ++F    + +       VR SPN  TFN L+L  Y++G +E   +I ++M
Sbjct: 210 GAYAGYEIYREVFGLDGRVLDDNAKRVVRTSPNVQTFNELMLGFYQDGAVEMVKEIWDQM 269

Query: 182 ETFGCDPTVFTYSILMSGFCDEGMMQDAKKLWEEMVTKGIKPDIVAFNTLIGGHCRAGEM 361
             F C P V++Y ILM  +C++  M  A++LWEEM  KG++PD VA+NT+IGG C+ G+M
Sbjct: 270 ADFSCCPDVYSYCILMETYCEDETMSKAEELWEEMRAKGVEPDAVAYNTMIGGFCKVGKM 329

Query: 362 EAAEDLYRNMTLTEIEPTVTTFEHLIGGHSKAGCVDSALLL 484
           E AE+ ++ M L+ IE T  T E L+ G+ K G +DSA+L+
Sbjct: 330 EMAEEFFKQMGLSGIESTNATCEQLVRGYCKIGKIDSAILV 370



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 33/101 (32%), Positives = 54/101 (53%), Gaps = 1/101 (0%)
 Frame = +2

Query: 107 TFNTLLLALYREGNMEKSIKI-RNEMETFGCDPTVFTYSILMSGFCDEGMMQDAKKLWEE 283
           T   L+  L  E  + +++++ R  M  +G  P   +Y  L+ G C++G +++A KL  +
Sbjct: 385 TVEELIRGLCDENRVLEALEVMRAAMVDYGFCPREKSYEFLIRGLCEQGKLEEALKLQAQ 444

Query: 284 MVTKGIKPDIVAFNTLIGGHCRAGEMEAAEDLYRNMTLTEI 406
           MV KG KP+   +   I G+ + G ME AE L   M  TE+
Sbjct: 445 MVGKGFKPNSEIYGAFISGYMKEGNMEVAELLRNEMLDTEL 485


>gb|EXB63632.1| hypothetical protein L484_026974 [Morus notabilis]
          Length = 476

 Score =  141 bits (355), Expect = 1e-31
 Identities = 69/160 (43%), Positives = 104/160 (65%)
 Frame = +2

Query: 5   NGSDAGFQVYSQIFKPQAVCHGVSMKVRVSPNPGTFNTLLLALYREGNMEKSIKIRNEME 184
           +G + G+++Y +IF     C  V   V +      FNTL++A Y++G  EK  +I  +M 
Sbjct: 210 HGPNEGYKMYKEIFGSN--CGAVEPSVEI------FNTLMVAFYQDGIFEKVKEIWEQML 261

Query: 185 TFGCDPTVFTYSILMSGFCDEGMMQDAKKLWEEMVTKGIKPDIVAFNTLIGGHCRAGEME 364
              CDP  ++YSILM+ +CDEG M +A+ LWEEM  K ++ D+VA+NT+IGG C  GE+E
Sbjct: 262 GLNCDPNCYSYSILMAVYCDEGKMDEAENLWEEMRAKNVEFDVVAYNTIIGGFCGIGEVE 321

Query: 365 AAEDLYRNMTLTEIEPTVTTFEHLIGGHSKAGCVDSALLL 484
            AE+ +R M L+ ++ + TT+EH + G+ K G VDSALL+
Sbjct: 322 KAEEFFREMGLSGLDGSATTYEHFVKGYCKVGNVDSALLV 361


>ref|XP_003575558.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15980-like [Brachypodium distachyon]
          Length = 477

 Score =  140 bits (354), Expect = 1e-31
 Identities = 70/158 (44%), Positives = 103/158 (65%)
 Frame = +2

Query: 11  SDAGFQVYSQIFKPQAVCHGVSMKVRVSPNPGTFNTLLLALYREGNMEKSIKIRNEMETF 190
           +DA  ++Y QI+       G      + P   TFN+LLLALYR+   E    +  EM+ +
Sbjct: 199 ADAALEMYHQIY----TLPGPRTNRWLQPTVQTFNSLLLALYRQAKYEDFNIVLGEMDRY 254

Query: 191 GCDPTVFTYSILMSGFCDEGMMQDAKKLWEEMVTKGIKPDIVAFNTLIGGHCRAGEMEAA 370
            C   V TY+I M+ FCD   M+ A+ LW+EMV  GI+PD+ A+NT+IGG+C AGE+  A
Sbjct: 255 SCKHNVGTYNIRMAAFCDGREMEKARGLWDEMVNGGIQPDVTAYNTMIGGYCGAGEVGMA 314

Query: 371 EDLYRNMTLTEIEPTVTTFEHLIGGHSKAGCVDSALLL 484
           E+++++M +  IEP+VTTFE L+ GH +AG VD+A+L+
Sbjct: 315 EEMFKDMEICGIEPSVTTFEWLVRGHCRAGDVDAAMLV 352


>ref|NP_179197.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75267579|sp|Q9XIM8.1|PP155_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g15980 gi|5306237|gb|AAD41970.1| hypothetical protein
           [Arabidopsis thaliana] gi|330251359|gb|AEC06453.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 498

 Score =  139 bits (349), Expect = 5e-31
 Identities = 68/162 (41%), Positives = 107/162 (66%), Gaps = 3/162 (1%)
 Frame = +2

Query: 8   GSDAGFQVYSQIFKPQAVCHGVSMKV--RVSPNPGTFNTLLLALYREGNMEKSIKIRNEM 181
           G+  G+++Y ++F    V    + K+  ++ PN  TFN+++++ YREG  E   +I  EM
Sbjct: 212 GASNGYKMYREVFGLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEMVERIWREM 271

Query: 182 ET-FGCDPTVFTYSILMSGFCDEGMMQDAKKLWEEMVTKGIKPDIVAFNTLIGGHCRAGE 358
           E   GC P V++Y++LM  +C  G+M +A+K+WEEM  +G+  DIVA+NT+IGG C   E
Sbjct: 272 EEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFE 331

Query: 359 MEAAEDLYRNMTLTEIEPTVTTFEHLIGGHSKAGCVDSALLL 484
           +  A++L+R+M L  IE T  T+EHL+ G+ KAG VDS L++
Sbjct: 332 VVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVV 373


>ref|XP_003537906.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15980-like [Glycine max]
          Length = 487

 Score =  135 bits (340), Expect = 6e-30
 Identities = 66/164 (40%), Positives = 107/164 (65%), Gaps = 3/164 (1%)
 Frame = +2

Query: 2   ANGSDAGFQVYSQIFKPQAVCHGVSMK---VRVSPNPGTFNTLLLALYREGNMEKSIKIR 172
           + G D G+ +Y + F+     + +S +    RV+PN  T+N L+L  Y++G +E+  KI 
Sbjct: 208 SRGVDEGYAIYREFFRLDEENNEISKRGSGFRVTPNVHTYNDLMLCCYQDGLVERVEKIW 267

Query: 173 NEMETFGCDPTVFTYSILMSGFCDEGMMQDAKKLWEEMVTKGIKPDIVAFNTLIGGHCRA 352
            EM+     P  ++YS+LM+ FCDEG M DA+KLWEE+ ++ I+PD+V++NT+IGG C  
Sbjct: 268 IEMKC-NYKPNAYSYSVLMATFCDEGRMGDAEKLWEELRSEKIEPDVVSYNTIIGGFCTI 326

Query: 353 GEMEAAEDLYRNMTLTEIEPTVTTFEHLIGGHSKAGCVDSALLL 484
           G++  AE+ +R M +  +  T +T+EHL+ G+   G VDSA+L+
Sbjct: 327 GDVGRAEEFFREMAVAGVGTTASTYEHLVKGYCNIGDVDSAVLV 370



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 30/106 (28%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
 Frame = +2

Query: 95  PNPGTFNTLLLALYREGNMEKSIK-IRNEMETFGCDPTVFTYSILMSGFCDEGMMQDAKK 271
           P+  T + ++  L  +G + +S++ +R  +  F   P   +Y  L+ G C +G M++A K
Sbjct: 381 PDASTLDVMIRLLCDKGRVRESLEFVRCAVGKFDLIPMEKSYEALIKGLCFDGRMEEALK 440

Query: 272 LWEEMVTKGIKPDIVAFNTLIGGHCRAGEMEAAEDLYRNMTLTEIE 409
           +  EMV KG +P+   +   + G+ R G  E AE L + M   +++
Sbjct: 441 VQAEMVGKGFQPNSEIYGAFVDGYVRHGNEEMAEALRKEMLQNQMQ 486


>ref|XP_006349623.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15980-like isoform X1 [Solanum tuberosum]
           gi|565365876|ref|XP_006349624.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g15980-like isoform X2 [Solanum tuberosum]
          Length = 493

 Score =  134 bits (337), Expect = 1e-29
 Identities = 66/162 (40%), Positives = 106/162 (65%), Gaps = 1/162 (0%)
 Frame = +2

Query: 2   ANGSDAGFQVYSQIFKPQAVCHGVSMKVR-VSPNPGTFNTLLLALYREGNMEKSIKIRNE 178
           + G  A + +Y +IF+ +    G   +V+ V  N  TFN L++A +REG +EK  ++  E
Sbjct: 213 SRGPFAAYDMYVEIFRCEKG-EGSGREVKGVMANAYTFNVLMVAFHREGVVEKIEEVWKE 271

Query: 179 METFGCDPTVFTYSILMSGFCDEGMMQDAKKLWEEMVTKGIKPDIVAFNTLIGGHCRAGE 358
           M    C P V++YSILM+ +C++G +++A K+W+EM  + +K DIVA+NT+I G C+ G+
Sbjct: 272 MMAKNCTPNVYSYSILMAAYCEDGRVENAMKVWKEMGDEDVKHDIVAYNTIIEGFCKVGK 331

Query: 359 MEAAEDLYRNMTLTEIEPTVTTFEHLIGGHSKAGCVDSALLL 484
           +E AE+++R M    +E T  T EHLI GH  +G +D+AL+L
Sbjct: 332 VERAEEVFREMVFNGVECTCVTLEHLINGHCMSGNIDAALVL 373


>gb|EMT27798.1| hypothetical protein F775_17674 [Aegilops tauschii]
          Length = 382

 Score =  134 bits (337), Expect = 1e-29
 Identities = 62/132 (46%), Positives = 93/132 (70%)
 Frame = +2

Query: 89  VSPNPGTFNTLLLALYREGNMEKSIKIRNEMETFGCDPTVFTYSILMSGFCDEGMMQDAK 268
           + P   TFN+LLLA YR G  E    + +EM+ + C   V TY+I M+  CD+  M+ A+
Sbjct: 17  LQPTAQTFNSLLLAFYRHGKPEDFDIVLDEMDRYSCKHNVGTYNIRMAACCDDREMEKAR 76

Query: 269 KLWEEMVTKGIKPDIVAFNTLIGGHCRAGEMEAAEDLYRNMTLTEIEPTVTTFEHLIGGH 448
            LW+EMV  GI+ D+ ++NT+IGG+C AGEM  AE++Y++M ++ IEP+VTTFE L+ GH
Sbjct: 77  GLWDEMVQGGIQTDVTSYNTMIGGYCAAGEMGMAEEMYKDMEISGIEPSVTTFEWLVRGH 136

Query: 449 SKAGCVDSALLL 484
            ++G VD+A+L+
Sbjct: 137 CRSGDVDAAMLV 148


>ref|XP_004248897.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15980-like [Solanum lycopersicum]
          Length = 495

 Score =  134 bits (336), Expect = 2e-29
 Identities = 65/161 (40%), Positives = 102/161 (63%)
 Frame = +2

Query: 2   ANGSDAGFQVYSQIFKPQAVCHGVSMKVRVSPNPGTFNTLLLALYREGNMEKSIKIRNEM 181
           + G  A + +Y +IF+ +           V+ N  TFN L++A +REG +EK  ++  EM
Sbjct: 215 SRGPFAAYDMYVEIFRCEKEEWSGREVKGVTANAYTFNVLMVAFHREGVVEKVEEVWKEM 274

Query: 182 ETFGCDPTVFTYSILMSGFCDEGMMQDAKKLWEEMVTKGIKPDIVAFNTLIGGHCRAGEM 361
               C P V++YSILM+ +C++G M+ A K+W+EM  + +K DIVA+NT+I G C+ G++
Sbjct: 275 MANNCTPNVYSYSILMAAYCEDGRMEYAMKVWKEMGDEDVKHDIVAYNTIIEGFCKVGKV 334

Query: 362 EAAEDLYRNMTLTEIEPTVTTFEHLIGGHSKAGCVDSALLL 484
           E AE+++R M   E+E T  T EHLI GH  +G + +AL+L
Sbjct: 335 ERAEEVFREMVFNEVECTCVTLEHLINGHCMSGNIHAALVL 375


>ref|XP_004161634.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15980-like [Cucumis sativus]
          Length = 499

 Score =  132 bits (332), Expect = 5e-29
 Identities = 67/161 (41%), Positives = 101/161 (62%), Gaps = 2/161 (1%)
 Frame = +2

Query: 8   GSDAGFQVYSQIFKPQAVCHG--VSMKVRVSPNPGTFNTLLLALYREGNMEKSIKIRNEM 181
           G++  + ++ ++F          V +K RVSPN  TFNTL+   YR+G + +  +I +++
Sbjct: 223 GANVAYAIFREVFGLDCEIEEEHVKLKGRVSPNVHTFNTLMDCFYRDGFVGRVKEIWDQL 282

Query: 182 ETFGCDPTVFTYSILMSGFCDEGMMQDAKKLWEEMVTKGIKPDIVAFNTLIGGHCRAGEM 361
                 P  ++YSILM+  C+E    +A++LWEEM  K ++PD+VA+NT+IGG C+AG  
Sbjct: 283 ADSNSTPNSYSYSILMTVLCEEKRTGEAEELWEEMKMKKLEPDVVAYNTIIGGFCKAGHT 342

Query: 362 EAAEDLYRNMTLTEIEPTVTTFEHLIGGHSKAGCVDSALLL 484
             AE+ YR M L+ IE T +T EHLI G+   G VDSALL+
Sbjct: 343 HRAEEFYREMELSGIESTFSTLEHLINGYCDTGDVDSALLV 383


>ref|XP_004145397.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15980-like [Cucumis sativus]
           gi|449472579|ref|XP_004153637.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g15980-like [Cucumis sativus]
          Length = 499

 Score =  131 bits (330), Expect = 8e-29
 Identities = 67/161 (41%), Positives = 100/161 (62%), Gaps = 2/161 (1%)
 Frame = +2

Query: 8   GSDAGFQVYSQIFKPQAVCHG--VSMKVRVSPNPGTFNTLLLALYREGNMEKSIKIRNEM 181
           G++  + ++ ++F          V +K RVSPN  TFNTL+   YR+G   +  +I +++
Sbjct: 223 GANVAYAIFREVFGLDCEIEEEHVKLKGRVSPNVHTFNTLMDCFYRDGFAGRVKEIWDQL 282

Query: 182 ETFGCDPTVFTYSILMSGFCDEGMMQDAKKLWEEMVTKGIKPDIVAFNTLIGGHCRAGEM 361
                 P  ++YSILM+  C+E    +A++LWEEM  K ++PD+VA+NT+IGG C+AG  
Sbjct: 283 ADSNSTPNSYSYSILMTVLCEEKRTGEAEELWEEMKMKKLEPDVVAYNTIIGGFCKAGHT 342

Query: 362 EAAEDLYRNMTLTEIEPTVTTFEHLIGGHSKAGCVDSALLL 484
             AE+ YR M L+ IE T +T EHLI G+   G VDSALL+
Sbjct: 343 HRAEEFYREMELSGIESTFSTLEHLINGYCDTGDVDSALLV 383


>dbj|BAJ94152.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 475

 Score =  131 bits (330), Expect = 8e-29
 Identities = 64/158 (40%), Positives = 101/158 (63%)
 Frame = +2

Query: 11  SDAGFQVYSQIFKPQAVCHGVSMKVRVSPNPGTFNTLLLALYREGNMEKSIKIRNEMETF 190
           +++  ++Y QI+       G      + P   TFN+LLLA YR G  E    + +EM+ +
Sbjct: 197 AESALEMYHQIYTRP----GPRTNRVLQPTAQTFNSLLLAFYRHGKSEDFDIVLDEMDRY 252

Query: 191 GCDPTVFTYSILMSGFCDEGMMQDAKKLWEEMVTKGIKPDIVAFNTLIGGHCRAGEMEAA 370
            C   V TY+I M+  CD+  M+ A+ LW+EMV  GI+PD+ ++NT+IGG+C A +M  A
Sbjct: 253 SCKHNVGTYNIRMAACCDDREMEKARGLWDEMVQGGIQPDVTSYNTMIGGYCAARDMGMA 312

Query: 371 EDLYRNMTLTEIEPTVTTFEHLIGGHSKAGCVDSALLL 484
           E++Y++M ++  EP+VTTFE L+ GH + G VD+A+L+
Sbjct: 313 EEMYKDMEISGTEPSVTTFEWLVRGHCRIGDVDAAMLV 350


>gb|EMS46297.1| hypothetical protein TRIUR3_16619 [Triticum urartu]
          Length = 319

 Score =  129 bits (325), Expect = 3e-28
 Identities = 59/132 (44%), Positives = 91/132 (68%)
 Frame = +2

Query: 89  VSPNPGTFNTLLLALYREGNMEKSIKIRNEMETFGCDPTVFTYSILMSGFCDEGMMQDAK 268
           + P   TFN+LLLA YR G  +    + +EM+ + C   V TY+I M+  CD+  M+ A+
Sbjct: 17  LQPTAQTFNSLLLAFYRHGKCQDFDIVLDEMDRYSCKHNVGTYNIRMAACCDDRDMEKAR 76

Query: 269 KLWEEMVTKGIKPDIVAFNTLIGGHCRAGEMEAAEDLYRNMTLTEIEPTVTTFEHLIGGH 448
            LW+EMV  GI+PD+ ++NT+IGG+C AGE+  AE+++++M +  IEP+VTT E L+ GH
Sbjct: 77  GLWDEMVQGGIQPDVTSYNTMIGGYCAAGEVGMAEEMFKDMEICGIEPSVTTLEWLVRGH 136

Query: 449 SKAGCVDSALLL 484
            + G VD+A+L+
Sbjct: 137 CRTGDVDAAMLV 148