BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00023652
         (1354 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003561660.1| PREDICTED: putative tRNA pseudouridine synth...   465   e-128
emb|CAN68579.1| hypothetical protein VITISV_034891 [Vitis vinifera]   464   e-128
ref|XP_004984444.1| PREDICTED: putative tRNA pseudouridine synth...   464   e-128
ref|XP_002276856.1| PREDICTED: putative tRNA pseudouridine synth...   464   e-128
gb|EAZ26854.1| hypothetical protein OsJ_10771 [Oryza sativa Japo...   462   e-127
ref|NP_001050056.1| Os03g0338600 [Oryza sativa Japonica Group] g...   462   e-127
emb|CBI15850.3| unnamed protein product [Vitis vinifera]              458   e-126
ref|XP_006348027.1| PREDICTED: putative tRNA pseudouridine synth...   458   e-126
ref|XP_002467892.1| hypothetical protein SORBIDRAFT_01g035980 [S...   457   e-126
ref|XP_004247032.1| PREDICTED: putative tRNA pseudouridine synth...   457   e-126
ref|XP_006651355.1| PREDICTED: putative tRNA pseudouridine synth...   456   e-125
gb|ACF83058.1| unknown [Zea mays] gi|414866704|tpg|DAA45261.1| T...   455   e-125
ref|XP_006468147.1| PREDICTED: putative tRNA pseudouridine synth...   447   e-123
gb|ESW14065.1| hypothetical protein PHAVU_008G250100g [Phaseolus...   446   e-122
gb|EOY34659.1| Pseudouridine synthase family protein [Theobroma ...   445   e-122
gb|EMJ08575.1| hypothetical protein PRUPE_ppa004352mg [Prunus pe...   445   e-122
ref|XP_004296032.1| PREDICTED: putative tRNA pseudouridine synth...   444   e-122
ref|XP_006410132.1| hypothetical protein EUTSA_v10016529mg [Eutr...   443   e-122
ref|XP_002319961.2| hypothetical protein POPTR_0013s15030g [Popu...   443   e-122
gb|ESW14066.1| hypothetical protein PHAVU_008G250200g [Phaseolus...   441   e-121

>ref|XP_003561660.1| PREDICTED: putative tRNA pseudouridine synthase-like [Brachypodium
            distachyon]
          Length = 522

 Score =  465 bits (1197), Expect = e-128
 Identities = 240/391 (61%), Positives = 297/391 (75%), Gaps = 2/391 (0%)
 Frame = +1

Query: 181  RWESFCKKKVVMRVGYIGTDYRGLQKQRDAHDLSTIEAELESAIYKAGGILDSNFGKLQK 360
            RWES  KK+VV+RVGY+G++YRGLQKQR+    STIE+ LESAI+KAGGIL+SN+GKLQK
Sbjct: 70   RWESTRKKRVVLRVGYVGSEYRGLQKQRELSADSTIESVLESAIFKAGGILESNYGKLQK 129

Query: 361  IGWKRSSRTDKGVHSLATTISLKMEIPDLAWKDDPSGIVLANYVNSNLPNNVKVFSILPS 540
            +GW+RSSRTDKGVHSLAT ISLKMEIPD AW++DP GI LAN++NSNLPNN+KVFSILP+
Sbjct: 130  VGWERSSRTDKGVHSLATMISLKMEIPDRAWENDPDGIALANFINSNLPNNIKVFSILPA 189

Query: 541  QKSFDPRRECSLRMYSYLLPAEIIGIGGNCSSKEVTKHLEEFNSILKGFEGERPFHNYTV 720
            Q+SFD RREC  R Y YLLPAEIIGI   CSS+EV +HL EFNSILKGFEG  PFHNYT 
Sbjct: 190  QRSFDVRRECLYREYFYLLPAEIIGIKSGCSSEEVEEHLIEFNSILKGFEGNHPFHNYTA 249

Query: 721  RSKYRKPPSGKRNSMKQSRLKLDTLPS--GVEESSGDVGNFHVEDATQSEYEERAILSCN 894
            R+KYRK  +G     K++   ++++PS   V++S  D G      AT    +E   L+ +
Sbjct: 250  RAKYRKVLAGAHRRSKETSSTINSIPSELAVDQSPNDDG------ATSDADDEH--LNFS 301

Query: 895  TXXXXXXXXXXXXKRNENKNSNLPPPVRARWLHEPDERDRLNASHFRKIFRCSCGDLETS 1074
            +            K N   + N    ++ARWLHEP+E DRL+ASHFR I  CSCG+L++S
Sbjct: 302  SVVDSSLPENDWNKDNPKHHEN-HVQIQARWLHEPNENDRLSASHFRDIITCSCGELQSS 360

Query: 1075 SGRNHVVLSICGESFMLHQIRKMVGTAVAVKRGLLPRDVIELSLAKFSRIVLPLAPSEVL 1254
            SG   V L+ICG SFMLHQIRKMVGTAVAVKRGLLP+++IELSLAKFSRIVLP+APSEVL
Sbjct: 361  SGIQFVELTICGVSFMLHQIRKMVGTAVAVKRGLLPKEIIELSLAKFSRIVLPIAPSEVL 420

Query: 1255 ILRSNHYTSSNRPGNTTRPEVQLMAESQEIQ 1347
            ILR N + + N+ G+  RP +Q + ES+E++
Sbjct: 421  ILRDNSFCTRNKQGSIVRPGIQSINESKEVK 451


>emb|CAN68579.1| hypothetical protein VITISV_034891 [Vitis vinifera]
          Length = 602

 Score =  464 bits (1195), Expect = e-128
 Identities = 243/396 (61%), Positives = 286/396 (72%), Gaps = 7/396 (1%)
 Frame = +1

Query: 178  KRWESFCKKKVVMRVGYIGTDYRGLQKQRDAHDLSTIEAELESAIYKAGGILDSNFGKLQ 357
            ++WESF KKKVVMRVGY+GT+YRGLQ QRD   LSTIE ELE+A++KAGGI DSN+G L 
Sbjct: 55   QKWESFRKKKVVMRVGYVGTNYRGLQMQRDESSLSTIEGELETAVFKAGGIRDSNYGNLH 114

Query: 358  KIGWKRSSRTDKGVHSLATTISLKMEIPDLAWKDDPSGIVLANYVNSNLPNNVKVFSILP 537
            KIGW RSSRTDKGVHSLAT ISLKMEIP  AWK+DP+GI LANYVN +LPNN+KVFSILP
Sbjct: 115  KIGWDRSSRTDKGVHSLATMISLKMEIPANAWKEDPNGIALANYVNFHLPNNIKVFSILP 174

Query: 538  SQKSFDPRRECSLRMYSYLLPAEIIGIGGNCSSKEVTKHLEEFNSILKGFEGERPFHNYT 717
            SQ+SFD RREC LR YSYLLPAEIIGI  N S+ E+  H+ EFN IL  FEGE PF NYT
Sbjct: 175  SQRSFDARRECDLRRYSYLLPAEIIGIKSNSSASEIDHHIAEFNDILNTFEGEHPFQNYT 234

Query: 718  VRSKYRKPPSGKRNS-----MKQSRLKLDTLPSGVEESSGDVGNFHVEDATQSEYEERAI 882
            +RSKYRK    K++       ++++   +   S  E S G+  N  V     S+Y+E   
Sbjct: 235  IRSKYRKQFPAKQSPGNGGVFRRAKSSGEASTSEFEVSDGE-ENSGVNGVISSDYDEGEN 293

Query: 883  LSCNTXXXXXXXXXXXXKRNEN--KNSNLPPPVRARWLHEPDERDRLNASHFRKIFRCSC 1056
             + +               NE   K  +    VRARWLH PDERDR++ASHFRKIF CSC
Sbjct: 294  QNSSESTSFVEHPVGSSNNNEKGLKEQSSKLVVRARWLHGPDERDRISASHFRKIFNCSC 353

Query: 1057 GDLETSSGRNHVVLSICGESFMLHQIRKMVGTAVAVKRGLLPRDVIELSLAKFSRIVLPL 1236
            G LE   G ++V LSICGESFMLHQIRKMVGTA+AVKR LLPRD++ LSL KFSRIVLPL
Sbjct: 354  GKLEKFLGLDYVELSICGESFMLHQIRKMVGTAIAVKRELLPRDILTLSLTKFSRIVLPL 413

Query: 1237 APSEVLILRSNHYTSSNRPGNTTRPEVQLMAESQEI 1344
            APSEVLILR N ++   +PGN  RPE+  + ES+EI
Sbjct: 414  APSEVLILRGNSFSVRKKPGNVKRPEMLTLMESEEI 449


>ref|XP_004984444.1| PREDICTED: putative tRNA pseudouridine synthase-like [Setaria
            italica]
          Length = 519

 Score =  464 bits (1194), Expect = e-128
 Identities = 241/391 (61%), Positives = 293/391 (74%), Gaps = 2/391 (0%)
 Frame = +1

Query: 181  RWESFCKKKVVMRVGYIGTDYRGLQKQRDAHDLSTIEAELESAIYKAGGILDSNFGKLQK 360
            RWES  KK+VV+RVGY+GT+YRGLQKQR+    STIE+ LESAI+KAGGIL+SN+GKLQK
Sbjct: 69   RWESARKKRVVLRVGYVGTEYRGLQKQRELSVDSTIESVLESAIFKAGGILESNYGKLQK 128

Query: 361  IGWKRSSRTDKGVHSLATTISLKMEIPDLAWKDDPSGIVLANYVNSNLPNNVKVFSILPS 540
            +GW+RSSRTDKGVHSLAT ISLKMEIPD AW++DP GI LA+++NSNLPNNV+VFSILP+
Sbjct: 129  VGWERSSRTDKGVHSLATMISLKMEIPDRAWENDPDGISLASFINSNLPNNVRVFSILPA 188

Query: 541  QKSFDPRRECSLRMYSYLLPAEIIGIGGNCSSKEVTKHLEEFNSILKGFEGERPFHNYTV 720
            Q+SFD RREC  R Y YLLPAE IGI   CSS+EV +HL EFNSILKGFEG  PFHNYT 
Sbjct: 189  QRSFDVRRECLYREYFYLLPAETIGIKDGCSSEEVQEHLSEFNSILKGFEGNHPFHNYTA 248

Query: 721  RSKYRKPPSGKRNSMKQSRLKLDTLPS--GVEESSGDVGNFHVEDATQSEYEERAILSCN 894
            R+KYRK  +G    +K + L L ++ S  G+EE+S        ED T S+++E      N
Sbjct: 249  RAKYRKVLAGSHRRVKGACLPLKSMSSETGMEENSS-------EDNTPSDHDE----DLN 297

Query: 895  TXXXXXXXXXXXXKRNENKNSNLPPPVRARWLHEPDERDRLNASHFRKIFRCSCGDLETS 1074
                           +  K+      ++ARWL+EPDE DRLNASHFR I  CSCG+L++S
Sbjct: 298  ISSMIDSGVEDNCLNDVAKHFGNQVQIQARWLYEPDESDRLNASHFRDIITCSCGELQSS 357

Query: 1075 SGRNHVVLSICGESFMLHQIRKMVGTAVAVKRGLLPRDVIELSLAKFSRIVLPLAPSEVL 1254
            SG   V L+ICG SFMLHQIRKMVGTAVAVKRGLLP+D+IELSLAKFSRIVLP+APSEVL
Sbjct: 358  SGIQFVELTICGVSFMLHQIRKMVGTAVAVKRGLLPKDIIELSLAKFSRIVLPIAPSEVL 417

Query: 1255 ILRSNHYTSSNRPGNTTRPEVQLMAESQEIQ 1347
            ILR N + + N+ G   RP ++ M +S E++
Sbjct: 418  ILRDNSFCTKNKEGRLVRPGIESMNKSAEVR 448


>ref|XP_002276856.1| PREDICTED: putative tRNA pseudouridine synthase-like [Vitis vinifera]
          Length = 564

 Score =  464 bits (1194), Expect = e-128
 Identities = 242/396 (61%), Positives = 285/396 (71%), Gaps = 7/396 (1%)
 Frame = +1

Query: 178  KRWESFCKKKVVMRVGYIGTDYRGLQKQRDAHDLSTIEAELESAIYKAGGILDSNFGKLQ 357
            ++WESF KKKVVMRVGY+GT+YRGLQ QRD   LSTIE ELE+A++KAGGI DSN+G L 
Sbjct: 55   QKWESFRKKKVVMRVGYVGTNYRGLQMQRDESSLSTIEGELETAVFKAGGIRDSNYGNLH 114

Query: 358  KIGWKRSSRTDKGVHSLATTISLKMEIPDLAWKDDPSGIVLANYVNSNLPNNVKVFSILP 537
            KIGW RSSRTDKGVHSLAT ISLKMEIP  AWK+DP+GI LANYVN +LPNN+KVFSILP
Sbjct: 115  KIGWDRSSRTDKGVHSLATMISLKMEIPANAWKEDPNGIALANYVNFHLPNNIKVFSILP 174

Query: 538  SQKSFDPRRECSLRMYSYLLPAEIIGIGGNCSSKEVTKHLEEFNSILKGFEGERPFHNYT 717
            SQ+SFD RREC LR YSYLLPAEIIGI  N S+ E+  H+ EFN IL  FEGE PF NYT
Sbjct: 175  SQRSFDARRECDLRRYSYLLPAEIIGIKSNSSASEIDHHIAEFNDILNTFEGEHPFQNYT 234

Query: 718  VRSKYRKPPSGKRNS-----MKQSRLKLDTLPSGVEESSGDVGNFHVEDATQSEYEERAI 882
            +RSKYRK    K++       ++++   +   S  E S G+  N  +     S+Y+E   
Sbjct: 235  IRSKYRKQFPAKQSPGNGGVFRRAKSSGEASTSEFEVSDGE-ENSGINGVISSDYDEGEN 293

Query: 883  LSCNTXXXXXXXXXXXXKRNENKNSNLPPP--VRARWLHEPDERDRLNASHFRKIFRCSC 1056
             + +               NE       P   VRARWLH PDERDR++ASHFRKIF CSC
Sbjct: 294  QNSSESTSFVEHPVGSSNNNEKGLKEQSPKLVVRARWLHGPDERDRISASHFRKIFNCSC 353

Query: 1057 GDLETSSGRNHVVLSICGESFMLHQIRKMVGTAVAVKRGLLPRDVIELSLAKFSRIVLPL 1236
            G LE   G ++V LSICGESFMLHQIRKMVGTA+AVKR LLPRD++ LSL KFSRIVLPL
Sbjct: 354  GKLEKFLGLDYVELSICGESFMLHQIRKMVGTAIAVKRELLPRDILTLSLTKFSRIVLPL 413

Query: 1237 APSEVLILRSNHYTSSNRPGNTTRPEVQLMAESQEI 1344
            APSEVLILR N ++   +PGN  RPE+  + ES+EI
Sbjct: 414  APSEVLILRGNSFSVRKKPGNVKRPEMLTLMESEEI 449


>gb|EAZ26854.1| hypothetical protein OsJ_10771 [Oryza sativa Japonica Group]
          Length = 516

 Score =  462 bits (1190), Expect = e-127
 Identities = 235/391 (60%), Positives = 295/391 (75%), Gaps = 2/391 (0%)
 Frame = +1

Query: 181  RWESFCKKKVVMRVGYIGTDYRGLQKQRDAHDLSTIEAELESAIYKAGGILDSNFGKLQK 360
            RWES  KK+VV+RVGY+GT+YRGLQKQR+    STIE+ LE+AI+KAGGIL+SN+GKLQK
Sbjct: 65   RWESARKKRVVLRVGYVGTEYRGLQKQRELSADSTIESVLETAIFKAGGILESNYGKLQK 124

Query: 361  IGWKRSSRTDKGVHSLATTISLKMEIPDLAWKDDPSGIVLANYVNSNLPNNVKVFSILPS 540
            +GW+RSSRTDKGVHSLAT ISLKMEIPD AW++DP GI L+N++NSNLP+NV+VFS+LP+
Sbjct: 125  VGWERSSRTDKGVHSLATMISLKMEIPDRAWENDPDGIALSNFINSNLPDNVRVFSVLPA 184

Query: 541  QKSFDPRRECSLRMYSYLLPAEIIGIGGNCSSKEVTKHLEEFNSILKGFEGERPFHNYTV 720
            Q+SFD RREC  R Y YLLPAEIIGI G CSS+EV +HL EFNSILKGFEG  PFHNYT 
Sbjct: 185  QRSFDVRRECLYREYLYLLPAEIIGIKGGCSSEEVMEHLSEFNSILKGFEGNHPFHNYTA 244

Query: 721  RSKYRKPPSGKRNSMKQSRLKLDTLPS--GVEESSGDVGNFHVEDATQSEYEERAILSCN 894
            R+KYRK  +G+   +K +   ++++P+   +++SS D       D T S+++E  +   N
Sbjct: 245  RAKYRKVLAGRHRKVKGASSAVNSMPTEMSLDQSSSD-------DGTTSDHDEEDL---N 294

Query: 895  TXXXXXXXXXXXXKRNENKNSNLPPPVRARWLHEPDERDRLNASHFRKIFRCSCGDLETS 1074
            +             ++  + S     +RARWLHEPDE DRLNASHFR I   SCG+L+ S
Sbjct: 295  SSSIIGSSVPEDSYKDNPEFSEKQVQIRARWLHEPDENDRLNASHFRDILTFSCGELQIS 354

Query: 1075 SGRNHVVLSICGESFMLHQIRKMVGTAVAVKRGLLPRDVIELSLAKFSRIVLPLAPSEVL 1254
            SG   V L+I G SFMLHQIRKMVGT+VAVKRGLLP+D+I LSLAKFSRIVLP+APSEVL
Sbjct: 355  SGIQFVELTISGVSFMLHQIRKMVGTSVAVKRGLLPKDIIALSLAKFSRIVLPIAPSEVL 414

Query: 1255 ILRSNHYTSSNRPGNTTRPEVQLMAESQEIQ 1347
            +LR N +   N+ G   RP +Q M ES+E++
Sbjct: 415  VLRDNSFCLRNKQGTIVRPGIQSMNESEEVK 445


>ref|NP_001050056.1| Os03g0338600 [Oryza sativa Japonica Group]
            gi|108708043|gb|ABF95838.1| tRNA pseudouridine synthase
            family protein, expressed [Oryza sativa Japonica Group]
            gi|113548527|dbj|BAF11970.1| Os03g0338600 [Oryza sativa
            Japonica Group]
          Length = 516

 Score =  462 bits (1190), Expect = e-127
 Identities = 235/391 (60%), Positives = 295/391 (75%), Gaps = 2/391 (0%)
 Frame = +1

Query: 181  RWESFCKKKVVMRVGYIGTDYRGLQKQRDAHDLSTIEAELESAIYKAGGILDSNFGKLQK 360
            RWES  KK+VV+RVGY+GT+YRGLQKQR+    STIE+ LE+AI+KAGGIL+SN+GKLQK
Sbjct: 65   RWESARKKRVVLRVGYVGTEYRGLQKQRELSADSTIESVLETAIFKAGGILESNYGKLQK 124

Query: 361  IGWKRSSRTDKGVHSLATTISLKMEIPDLAWKDDPSGIVLANYVNSNLPNNVKVFSILPS 540
            +GW+RSSRTDKGVHSLAT ISLKMEIPD AW++DP GI L+N++NSNLP+NV+VFS+LP+
Sbjct: 125  VGWERSSRTDKGVHSLATMISLKMEIPDRAWENDPDGIALSNFINSNLPDNVRVFSVLPA 184

Query: 541  QKSFDPRRECSLRMYSYLLPAEIIGIGGNCSSKEVTKHLEEFNSILKGFEGERPFHNYTV 720
            Q+SFD RREC  R Y YLLPAEIIGI G CSS+EV +HL EFNSILKGFEG  PFHNYT 
Sbjct: 185  QRSFDVRRECLYREYLYLLPAEIIGIKGGCSSEEVMEHLSEFNSILKGFEGNHPFHNYTA 244

Query: 721  RSKYRKPPSGKRNSMKQSRLKLDTLPS--GVEESSGDVGNFHVEDATQSEYEERAILSCN 894
            R+KYRK  +G+   +K +   ++++P+   +++SS D       D T S+++E  +   N
Sbjct: 245  RAKYRKVLAGRHRKVKGASSAVNSMPTEMSLDQSSSD-------DGTTSDHDEEDL---N 294

Query: 895  TXXXXXXXXXXXXKRNENKNSNLPPPVRARWLHEPDERDRLNASHFRKIFRCSCGDLETS 1074
            +             ++  + S     +RARWLHEPDE DRLNASHFR I   SCG+L+ S
Sbjct: 295  SSSIIGSSVPEDSYKDNPEFSEKQVQIRARWLHEPDENDRLNASHFRDILTFSCGELQIS 354

Query: 1075 SGRNHVVLSICGESFMLHQIRKMVGTAVAVKRGLLPRDVIELSLAKFSRIVLPLAPSEVL 1254
            SG   V L+I G SFMLHQIRKMVGT+VAVKRGLLP+D+I LSLAKFSRIVLP+APSEVL
Sbjct: 355  SGIQFVELTISGVSFMLHQIRKMVGTSVAVKRGLLPKDIIALSLAKFSRIVLPIAPSEVL 414

Query: 1255 ILRSNHYTSSNRPGNTTRPEVQLMAESQEIQ 1347
            +LR N +   N+ G   RP +Q M ES+E++
Sbjct: 415  VLRDNSFCLRNKQGTIVRPGIQSMNESEEVK 445


>emb|CBI15850.3| unnamed protein product [Vitis vinifera]
          Length = 495

 Score =  458 bits (1179), Expect = e-126
 Identities = 239/391 (61%), Positives = 275/391 (70%), Gaps = 2/391 (0%)
 Frame = +1

Query: 178  KRWESFCKKKVVMRVGYIGTDYRGLQKQRDAHDLSTIEAELESAIYKAGGILDSNFGKLQ 357
            ++WESF KKKVVMRVGY+GT+YRGLQ QRD   LSTIE ELE+A++KAGGI DSN+G L 
Sbjct: 55   QKWESFRKKKVVMRVGYVGTNYRGLQMQRDESSLSTIEGELETAVFKAGGIRDSNYGNLH 114

Query: 358  KIGWKRSSRTDKGVHSLATTISLKMEIPDLAWKDDPSGIVLANYVNSNLPNNVKVFSILP 537
            KIGW RSSRTDKGVHSLAT ISLKMEIP  AWK+DP+GI LANYVN +LPNN+KVFSILP
Sbjct: 115  KIGWDRSSRTDKGVHSLATMISLKMEIPANAWKEDPNGIALANYVNFHLPNNIKVFSILP 174

Query: 538  SQKSFDPRRECSLRMYSYLLPAEIIGIGGNCSSKEVTKHLEEFNSILKGFEGERPFHNYT 717
            SQ+SFD RREC LR YSYLLPAEIIGI  N S+ E+  H+ EFN IL  FEGE PF NYT
Sbjct: 175  SQRSFDARRECDLRRYSYLLPAEIIGIKSNSSASEIDHHIAEFNDILNTFEGEHPFQNYT 234

Query: 718  VRSKYRKPPSGKRNSMKQSRLKLDTLPSGVEESSGDVGNFHVEDATQSEYEERAILSCNT 897
            +RSKYRK                   P+     +G V          S+Y+E    + + 
Sbjct: 235  IRSKYRK-----------------QFPAKQSPGNGGVFRRAKSSVISSDYDEGENQNSSE 277

Query: 898  XXXXXXXXXXXXKRNENKNSNLPPP--VRARWLHEPDERDRLNASHFRKIFRCSCGDLET 1071
                          NE       P   VRARWLH PDERDR++ASHFRKIF CSCG LE 
Sbjct: 278  STSFVEHPVGSSNNNEKGLKEQSPKLVVRARWLHGPDERDRISASHFRKIFNCSCGKLEK 337

Query: 1072 SSGRNHVVLSICGESFMLHQIRKMVGTAVAVKRGLLPRDVIELSLAKFSRIVLPLAPSEV 1251
              G ++V LSICGESFMLHQIRKMVGTA+AVKR LLPRD++ LSL KFSRIVLPLAPSEV
Sbjct: 338  FLGLDYVELSICGESFMLHQIRKMVGTAIAVKRELLPRDILTLSLTKFSRIVLPLAPSEV 397

Query: 1252 LILRSNHYTSSNRPGNTTRPEVQLMAESQEI 1344
            LILR N ++   +PGN  RPE+  + ES+EI
Sbjct: 398  LILRGNSFSVRKKPGNVKRPEMLTLMESEEI 428


>ref|XP_006348027.1| PREDICTED: putative tRNA pseudouridine synthase-like isoform X1
            [Solanum tuberosum]
          Length = 487

 Score =  458 bits (1178), Expect = e-126
 Identities = 232/391 (59%), Positives = 281/391 (71%)
 Frame = +1

Query: 181  RWESFCKKKVVMRVGYIGTDYRGLQKQRDAHDLSTIEAELESAIYKAGGILDSNFGKLQK 360
            +W+ F KKKVVMRVGY+G+DYRGLQ QRD H LSTIE ELE AI+KAGGI DSNFG L K
Sbjct: 43   KWDPFIKKKVVMRVGYVGSDYRGLQMQRDEHQLSTIEGELEKAIFKAGGIRDSNFGNLYK 102

Query: 361  IGWKRSSRTDKGVHSLATTISLKMEIPDLAWKDDPSGIVLANYVNSNLPNNVKVFSILPS 540
            IGW RSSRTDKGVHSLAT ISLKMEIP  AW+DDP+GI LAN VNS+LP N++VFSILPS
Sbjct: 103  IGWARSSRTDKGVHSLATMISLKMEIPADAWEDDPNGIALANCVNSSLPENIRVFSILPS 162

Query: 541  QKSFDPRRECSLRMYSYLLPAEIIGIGGNCSSKEVTKHLEEFNSILKGFEGERPFHNYTV 720
            +K FD RREC+ R YSYL+PAEIIGI  + +S E+  H+  FN IL  FEGE PFHNYT+
Sbjct: 163  KKRFDARRECNARKYSYLIPAEIIGIKNDSTSSEIEYHIANFNDILNSFEGEHPFHNYTI 222

Query: 721  RSKYRKPPSGKRNSMKQSRLKLDTLPSGVEESSGDVGNFHVEDATQSEYEERAILSCNTX 900
            RSKYRK  S  RN +K   L     PS  +E SG       E   +   +E+ +++    
Sbjct: 223  RSKYRK-QSPARNLLKNESLLKKGRPSSEKEISGS-----EESDGEQNGKEKGVVTIVEA 276

Query: 901  XXXXXXXXXXXKRNENKNSNLPPPVRARWLHEPDERDRLNASHFRKIFRCSCGDLETSSG 1080
                       K + +K+ N   P++ARWLHEPD RD+L+++HFR+IF C CG LE   G
Sbjct: 277  ENQNPEGNCNEKVSHSKDLNSVIPIQARWLHEPDARDKLSSAHFRRIFHCHCGKLEKLLG 336

Query: 1081 RNHVVLSICGESFMLHQIRKMVGTAVAVKRGLLPRDVIELSLAKFSRIVLPLAPSEVLIL 1260
             N+V +SICGESFMLHQIRKMVGTAVA+KR LLP D++ +SL KFSRIVLPLAPSEVL+L
Sbjct: 337  MNYVEVSICGESFMLHQIRKMVGTAVAIKRNLLPHDILRMSLCKFSRIVLPLAPSEVLVL 396

Query: 1261 RSNHYTSSNRPGNTTRPEVQLMAESQEIQAA 1353
            + N++   N PGN  RPE+  + ES +I  A
Sbjct: 397  KGNNFALRNHPGNIIRPEMLTLLESDDILKA 427


>ref|XP_002467892.1| hypothetical protein SORBIDRAFT_01g035980 [Sorghum bicolor]
            gi|241921746|gb|EER94890.1| hypothetical protein
            SORBIDRAFT_01g035980 [Sorghum bicolor]
          Length = 520

 Score =  457 bits (1176), Expect = e-126
 Identities = 237/391 (60%), Positives = 293/391 (74%), Gaps = 2/391 (0%)
 Frame = +1

Query: 181  RWESFCKKKVVMRVGYIGTDYRGLQKQRDAHDLSTIEAELESAIYKAGGILDSNFGKLQK 360
            RWES  KK+VV+R+GYIGT+YRGLQKQR+    STIE+ LESAI+K+GGIL+SN+GKLQK
Sbjct: 70   RWESARKKRVVLRIGYIGTEYRGLQKQRELGVDSTIESVLESAIFKSGGILESNYGKLQK 129

Query: 361  IGWKRSSRTDKGVHSLATTISLKMEIPDLAWKDDPSGIVLANYVNSNLPNNVKVFSILPS 540
            +GW+RSSRTDKGVHSLAT ISLKMEIPD AW+DDP GI LA+++NSNLP+NV+VFSILP+
Sbjct: 130  VGWERSSRTDKGVHSLATMISLKMEIPDRAWEDDPDGIALASFINSNLPDNVRVFSILPA 189

Query: 541  QKSFDPRRECSLRMYSYLLPAEIIGIGGNCSSKEVTKHLEEFNSILKGFEGERPFHNYTV 720
            Q+SFD RREC  R Y YLLPAE+IGI    S +E+ +HL EFNSILKGFEG  PFHNYT 
Sbjct: 190  QRSFDVRRECLYREYFYLLPAEVIGIKDGYSPEEIQEHLSEFNSILKGFEGNHPFHNYTA 249

Query: 721  RSKYRKPPSGKRNSMKQSRLKLDTLPS--GVEESSGDVGNFHVEDATQSEYEERAILSCN 894
            R+KYRK  +G+    K + L L ++ S  G+ ESS       +E  +  + E+  I S +
Sbjct: 250  RAKYRKVLAGRHPRAKGASLTLKSMSSEMGMAESSS------LESTSSDDDEDLNISSID 303

Query: 895  TXXXXXXXXXXXXKRNENKNSNLPPPVRARWLHEPDERDRLNASHFRKIFRCSCGDLETS 1074
            +            K +E++       ++ARWLHEPDE DRLNASHFR I  CSCG+L+TS
Sbjct: 304  SGASENIFVNDILKFSESR-----VQIQARWLHEPDESDRLNASHFRDIITCSCGELQTS 358

Query: 1075 SGRNHVVLSICGESFMLHQIRKMVGTAVAVKRGLLPRDVIELSLAKFSRIVLPLAPSEVL 1254
            SG   V L+ICG SFMLHQIRKMVGTAVAVKRGLLP+D+IELSLAKFSRIVLP+APSEVL
Sbjct: 359  SGIQFVELTICGVSFMLHQIRKMVGTAVAVKRGLLPKDIIELSLAKFSRIVLPIAPSEVL 418

Query: 1255 ILRSNHYTSSNRPGNTTRPEVQLMAESQEIQ 1347
            IL+ N + + ++ G   RP +Q M +S  I+
Sbjct: 419  ILKDNSFCTKSKEGRIVRPGIQSMNKSAAIR 449


>ref|XP_004247032.1| PREDICTED: putative tRNA pseudouridine synthase-like [Solanum
            lycopersicum]
          Length = 496

 Score =  457 bits (1175), Expect = e-126
 Identities = 233/391 (59%), Positives = 280/391 (71%)
 Frame = +1

Query: 181  RWESFCKKKVVMRVGYIGTDYRGLQKQRDAHDLSTIEAELESAIYKAGGILDSNFGKLQK 360
            +WE F KKKVVMRVGY+G+DYRGLQ QRD H LSTIE ELE AI+KAGGI +SNFG L K
Sbjct: 39   KWEPFIKKKVVMRVGYVGSDYRGLQMQRDEHQLSTIEGELEKAIFKAGGIRESNFGNLYK 98

Query: 361  IGWKRSSRTDKGVHSLATTISLKMEIPDLAWKDDPSGIVLANYVNSNLPNNVKVFSILPS 540
            IGW RSSRTDKGVHSLAT ISLKMEIP  AW+DDP+GI LAN VNS+LP N++VFSILPS
Sbjct: 99   IGWARSSRTDKGVHSLATMISLKMEIPADAWEDDPNGITLANCVNSSLPENIRVFSILPS 158

Query: 541  QKSFDPRRECSLRMYSYLLPAEIIGIGGNCSSKEVTKHLEEFNSILKGFEGERPFHNYTV 720
            +K FD RREC+ R YSYL+PAEIIGI  + +S E+  H+  FN IL  FEGE PFHNYT+
Sbjct: 159  KKRFDARRECNARKYSYLIPAEIIGIKNDSASSEIEYHIANFNDILNSFEGEHPFHNYTI 218

Query: 721  RSKYRKPPSGKRNSMKQSRLKLDTLPSGVEESSGDVGNFHVEDATQSEYEERAILSCNTX 900
            RSKYRK  S  RN +K   L     PS  EE SG       E   +   +E+ +++    
Sbjct: 219  RSKYRK-QSPARNLLKNDSLLKKGRPSSEEEISGS-----EEIDGEQNRKEQGVVTIVEA 272

Query: 901  XXXXXXXXXXXKRNENKNSNLPPPVRARWLHEPDERDRLNASHFRKIFRCSCGDLETSSG 1080
                       K + +K+ N   P++ARWLHEPD RD+L+++HFR+IF C CG LE   G
Sbjct: 273  ENQNAEGNCNLKVSHSKDLNSVIPIQARWLHEPDARDKLSSAHFRRIFHCHCGKLEKLLG 332

Query: 1081 RNHVVLSICGESFMLHQIRKMVGTAVAVKRGLLPRDVIELSLAKFSRIVLPLAPSEVLIL 1260
             N+V +SICGESFMLHQIRKMVGTAVA+KR LLP D + +SL KFSRIVLPLAPSEVL+L
Sbjct: 333  MNYVEVSICGESFMLHQIRKMVGTAVAIKRNLLPHDTLRMSLCKFSRIVLPLAPSEVLVL 392

Query: 1261 RSNHYTSSNRPGNTTRPEVQLMAESQEIQAA 1353
            + N++   N PGN  RPE+  + ES +I  A
Sbjct: 393  KGNNFALRNHPGNIIRPEMLTLLESDDILKA 423


>ref|XP_006651355.1| PREDICTED: putative tRNA pseudouridine synthase-like [Oryza
            brachyantha]
          Length = 518

 Score =  456 bits (1173), Expect = e-125
 Identities = 234/391 (59%), Positives = 292/391 (74%), Gaps = 2/391 (0%)
 Frame = +1

Query: 181  RWESFCKKKVVMRVGYIGTDYRGLQKQRDAHDLSTIEAELESAIYKAGGILDSNFGKLQK 360
            RWES  KK+VV+RVGY+GT+YRGLQKQR+    STIE+ LE+AI+K GGIL+SN+GKLQK
Sbjct: 67   RWESARKKRVVLRVGYVGTEYRGLQKQRELSADSTIESVLETAIFKTGGILESNYGKLQK 126

Query: 361  IGWKRSSRTDKGVHSLATTISLKMEIPDLAWKDDPSGIVLANYVNSNLPNNVKVFSILPS 540
            +GW+RSSRTDKGVHSLAT ISLKMEIPD AW++DP GI L+N++NSNLP+NV+VFSILP+
Sbjct: 127  VGWERSSRTDKGVHSLATMISLKMEIPDRAWENDPDGISLSNFINSNLPDNVRVFSILPA 186

Query: 541  QKSFDPRRECSLRMYSYLLPAEIIGIGGNCSSKEVTKHLEEFNSILKGFEGERPFHNYTV 720
            Q+SFD R+EC  R Y YL+PAEIIGI   CSS EV +HL EFN ILKGFEG  PFHNYT 
Sbjct: 187  QRSFDVRKECLYRDYLYLIPAEIIGIKDGCSSDEVVEHLSEFNYILKGFEGNHPFHNYTA 246

Query: 721  RSKYRKPPSGKRNSMKQSRLKLDTLPS--GVEESSGDVGNFHVEDATQSEYEERAILSCN 894
            R+KYRK  +G+   +K++   ++++ S  G+E  S D       D T S+++E  +   N
Sbjct: 247  RAKYRKVLAGRHRKVKRASSAVNSMSSKMGMEGISSD-------DGTSSDHDEEDL---N 296

Query: 895  TXXXXXXXXXXXXKRNENKNSNLPPPVRARWLHEPDERDRLNASHFRKIFRCSCGDLETS 1074
            +             ++  + S     +RARWLHEPDE DRLNASHFR I   SCG+L++S
Sbjct: 297  SSSLIGSSAPENSYKDSPELSKKQVQIRARWLHEPDENDRLNASHFRDILTFSCGELQSS 356

Query: 1075 SGRNHVVLSICGESFMLHQIRKMVGTAVAVKRGLLPRDVIELSLAKFSRIVLPLAPSEVL 1254
            SG   V L+I G SFMLHQIRKMVGTAVAVKRGLLP+D+I LSLAKFSRIVLP+APSEVL
Sbjct: 357  SGMQFVELTISGVSFMLHQIRKMVGTAVAVKRGLLPKDIIALSLAKFSRIVLPIAPSEVL 416

Query: 1255 ILRSNHYTSSNRPGNTTRPEVQLMAESQEIQ 1347
            ILR N +   N+ G+  RP +Q M ES+E++
Sbjct: 417  ILRDNSFCLKNKQGSIVRPGIQSMNESEEVK 447


>gb|ACF83058.1| unknown [Zea mays] gi|414866704|tpg|DAA45261.1| TPA: hypothetical
            protein ZEAMMB73_241728 [Zea mays]
          Length = 516

 Score =  455 bits (1170), Expect = e-125
 Identities = 237/390 (60%), Positives = 293/390 (75%), Gaps = 4/390 (1%)
 Frame = +1

Query: 181  RWESFCKKKVVMRVGYIGTDYRGLQKQRDAHDLSTIEAELESAIYKAGGILDSNFGKLQK 360
            RWES  KK+VV+R+GY+GTDYRGLQKQ++    STIE+ LESAI+K+GGIL+SN+GKLQK
Sbjct: 70   RWESARKKRVVLRIGYVGTDYRGLQKQQELGVDSTIESVLESAIFKSGGILESNYGKLQK 129

Query: 361  IGWKRSSRTDKGVHSLATTISLKMEIPDLAWKDDPSGIVLANYVNSNLPNNVKVFSILPS 540
            IGW+RSSRTDKGVHSLAT ISLKMEIPD AW+DDP GI LA+++NSNLP+NV+VFSILP+
Sbjct: 130  IGWERSSRTDKGVHSLATMISLKMEIPDRAWEDDPDGIALASFINSNLPDNVRVFSILPA 189

Query: 541  QKSFDPRRECSLRMYSYLLPAEIIGIGGNCSSKEVTKHLEEFNSILKGFEGERPFHNYTV 720
            Q+SFD RREC  R Y YLLPAEIIGI  + SS+E+ +HL EFN ILKGFEG  PFHNYT 
Sbjct: 190  QRSFDVRRECLYREYFYLLPAEIIGIKDDYSSEEMQEHLSEFNKILKGFEGNHPFHNYTA 249

Query: 721  RSKYRKPPSGKRNSMK--QSRLKLDTLPSGVEESSGDVGNFHVEDATQSEYEERAILSC- 891
            R+KYRK  +G+    K   S LK  +  +G+ ESS        E++T  +++E   +S  
Sbjct: 250  RAKYRKVLAGRHRRAKGASSALKSMSSDTGMAESSS-------EESTSPDHDEDLNISSI 302

Query: 892  -NTXXXXXXXXXXXXKRNENKNSNLPPPVRARWLHEPDERDRLNASHFRKIFRCSCGDLE 1068
             ++            K +E++       ++ARWLHEPDE DRLNASHFR I  CSCGDL+
Sbjct: 303  FDSGIPEDTRVNGILKLSEDRLQ-----IQARWLHEPDESDRLNASHFRDIITCSCGDLQ 357

Query: 1069 TSSGRNHVVLSICGESFMLHQIRKMVGTAVAVKRGLLPRDVIELSLAKFSRIVLPLAPSE 1248
            TSSG   V L+ICG SFMLHQIRKMVGTAV VKRGLLPRD+IELSLAKFSRIVLP+APSE
Sbjct: 358  TSSGIQFVELTICGVSFMLHQIRKMVGTAVTVKRGLLPRDIIELSLAKFSRIVLPIAPSE 417

Query: 1249 VLILRSNHYTSSNRPGNTTRPEVQLMAESQ 1338
            VL+L+ N + + ++ G   RP +Q M +S+
Sbjct: 418  VLVLKDNSFCTKSKGGRIVRPGIQSMNKSE 447


>ref|XP_006468147.1| PREDICTED: putative tRNA pseudouridine synthase-like isoform X4
            [Citrus sinensis]
          Length = 539

 Score =  447 bits (1149), Expect = e-123
 Identities = 236/399 (59%), Positives = 282/399 (70%), Gaps = 11/399 (2%)
 Frame = +1

Query: 181  RWESFCKKKVVMRVGYIGTDYRGLQKQRDAHDLSTIEAELESAIYKAGGILDSNFGKLQK 360
            +WE   KKKV +RVGY+GTDYRGLQ QRD H LSTIE ELE+A++KAGGI +SN+G LQK
Sbjct: 71   KWEPVRKKKVALRVGYVGTDYRGLQMQRDEHSLSTIEGELETAVFKAGGIRESNYGNLQK 130

Query: 361  IGWKRSSRTDKGVHSLATTISLKMEIPDLAWKDDPSGIVLANYVNSNLPNNVKVFSILPS 540
            I W RSSRTDKGVHSLAT I LKMEIP  AWKDDP GI LA  VN++LP N+KVFSILPS
Sbjct: 131  IAWARSSRTDKGVHSLATMICLKMEIPPDAWKDDPYGIDLAKRVNAHLPRNIKVFSILPS 190

Query: 541  QKSFDPRRECSLRMYSYLLPAEIIGIGGNCSSKEVTKHLEEFNSILKGFEGERPFHNYTV 720
            Q+SFDPRREC+LR YSYLLPAE+IGI    ++ E+  H+ +FN+IL  FEGE PFHNYT 
Sbjct: 191  QRSFDPRRECNLRKYSYLLPAEVIGINSQLTAAEIDSHISDFNAILNEFEGEHPFHNYTE 250

Query: 721  RSKYRKPPSGKRNSMKQSRLKLDTLPSGVEESSGDVGNFHVEDATQSEYE---------- 870
            RSKYR+ P       K+++   D + S VEES G+   F   + +  E +          
Sbjct: 251  RSKYRRKPHKTGCVSKRAKASKDAVFSRVEESEGEEDGFSKVEESDGEEDLGIGGEISSD 310

Query: 871  -ERAILSCNTXXXXXXXXXXXXKRNENKNSNLPPPVRARWLHEPDERDRLNASHFRKIFR 1047
             E+A  + +               N  K+ N    +RARWL+E DE D+L+ASHFRKIF 
Sbjct: 311  DEKANQN-SMVSGVHQEDCCNQHANGLKDQNSSSVIRARWLYETDEADKLSASHFRKIFS 369

Query: 1048 CSCGDLETSSGRNHVVLSICGESFMLHQIRKMVGTAVAVKRGLLPRDVIELSLAKFSRIV 1227
            CSCG LE S G  +V +SI GESFMLHQIRKMVGTAVAVKR LLPRD++ LSLAK SRIV
Sbjct: 370  CSCGKLEKSLGFGYVEISISGESFMLHQIRKMVGTAVAVKRKLLPRDILTLSLAKHSRIV 429

Query: 1228 LPLAPSEVLILRSNHYTSSNRPGNTTRPEVQLMAESQEI 1344
            LPLAPSEVL LR+N ++   RPG  TRPE+Q M ES+EI
Sbjct: 430  LPLAPSEVLFLRANSFSVRTRPG-VTRPEMQTMVESEEI 467


>gb|ESW14065.1| hypothetical protein PHAVU_008G250100g [Phaseolus vulgaris]
          Length = 507

 Score =  446 bits (1146), Expect = e-122
 Identities = 237/398 (59%), Positives = 283/398 (71%), Gaps = 8/398 (2%)
 Frame = +1

Query: 184  WESFCKKKVVMRVGYIGTDYRGLQKQRDAHDLSTIEAELESAIYKAGGILDSNFGKLQKI 363
            W+   KKKVVMRV Y+GT+YRGLQ Q D H LSTIE ELE+A++KAGGI +SNFG LQKI
Sbjct: 54   WQPSRKKKVVMRVAYVGTNYRGLQMQHDEHFLSTIEKELETAVFKAGGIRESNFGDLQKI 113

Query: 364  GWKRSSRTDKGVHSLATTISLKMEIPDLAWKDDPSGIVLANYVNSNLPNNVKVFSILPSQ 543
             W RSSRTDKGVHSLAT +S KMEIP+ AW  DP G  LANYVNS LP ++KV SILPSQ
Sbjct: 114  KWARSSRTDKGVHSLATIVSFKMEIPENAWNGDPYGFGLANYVNSYLPFDIKVLSILPSQ 173

Query: 544  KSFDPRRECSLRMYSYLLPAEIIGIGGNCSSKEVTKHLEEFNSILKGFEGERPFHNYTVR 723
            +SFDPR+EC+ R YSYLLPAEIIGI  + S+ E+  H+ EF+ IL  FEGE PFHNYT R
Sbjct: 174  RSFDPRKECAWRKYSYLLPAEIIGIQSDSSNDEIDYHISEFHDILNVFEGEHPFHNYTAR 233

Query: 724  SKYRKPPSGKRNSMKQSRLKLDTLPSGVEES--SGDVGNFHVEDATQSEYEERAILSCNT 897
            +KYRK    K+ S K     ++ LP    E   S +  NF +++A     E R+     T
Sbjct: 234  AKYRKHFPNKQLSSK----SVERLPPYESECEYSDEEENFEIDEAFTENIECRSQKCSET 289

Query: 898  XXXXXXXXXXXXKRNENKNSNLPP------PVRARWLHEPDERDRLNASHFRKIFRCSCG 1059
                          + NKN N  P        RARWL+EPDE DRL+ASHFRK+F+CSCG
Sbjct: 290  HNFGKPVVG-----SSNKNGNRLPGQDSRLVARARWLYEPDEADRLSASHFRKVFQCSCG 344

Query: 1060 DLETSSGRNHVVLSICGESFMLHQIRKMVGTAVAVKRGLLPRDVIELSLAKFSRIVLPLA 1239
             LETS G N++ +SI GESFMLHQIRKMVGTAVAVKR +LP+D+I+LSLA+FSRI+LPLA
Sbjct: 345  KLETSLGYNYIEISIQGESFMLHQIRKMVGTAVAVKRKVLPKDIIKLSLARFSRIILPLA 404

Query: 1240 PSEVLILRSNHYTSSNRPGNTTRPEVQLMAESQEIQAA 1353
            PSEVLILR N ++   RPGN TRPE+Q M ES+EI  A
Sbjct: 405  PSEVLILRGNRFSIRTRPGNVTRPEMQAMVESEEINKA 442


>gb|EOY34659.1| Pseudouridine synthase family protein [Theobroma cacao]
          Length = 507

 Score =  445 bits (1145), Expect = e-122
 Identities = 239/393 (60%), Positives = 283/393 (72%), Gaps = 5/393 (1%)
 Frame = +1

Query: 181  RWESFCKKKVVMRVGYIGTDYRGLQKQRDAHDLSTIEAELESAIYKAGGILDSNFGKLQK 360
            +WE F KKKVVMRVGY+GT+YRGLQ QRD H LSTIE ELE+AI+KAGGI DSN+G L K
Sbjct: 50   KWEPFRKKKVVMRVGYVGTNYRGLQVQRDEHQLSTIENELETAIFKAGGIRDSNYGDLHK 109

Query: 361  IGWKRSSRTDKGVHSLATTISLKMEIPDLAWKDDPSGIVLANYVNSNLPNNVKVFSILPS 540
            I W RSSRTDKGVHSLAT I+LKMEIP+ AWK+DP+GI LA  VNS LP+++KVFSILPS
Sbjct: 110  IAWARSSRTDKGVHSLATMITLKMEIPEDAWKEDPNGIALAKCVNSYLPDSIKVFSILPS 169

Query: 541  QKSFDPRRECSLRMYSYLLPAEIIGIGGNCSSKEVTKHLEEFNSILKGFEGERPFHNYTV 720
            QKSFDPRREC+LR YSYLLPAEIIGI  + S  E+  H+ +FNSIL  FEGE PFHNYT 
Sbjct: 170  QKSFDPRRECNLRKYSYLLPAEIIGIKSHFSEAEINHHISDFNSILNCFEGEHPFHNYTQ 229

Query: 721  RSKYRK---PPSGKRNSM--KQSRLKLDTLPSGVEESSGDVGNFHVEDATQSEYEERAIL 885
            R+KYR+   P    RN    K +    ++  S +EES  +  +  +E+ T    EE+   
Sbjct: 230  RAKYRRQIPPRQTARNGRVPKGAEAHDESSTSELEESDVE-EDPRIEETTTLNSEEK--- 285

Query: 886  SCNTXXXXXXXXXXXXKRNENKNSNLPPPVRARWLHEPDERDRLNASHFRKIFRCSCGDL 1065
              +T            + N  +  +    VRARWL+EPDE DR+ ASHFRKIF CSCG L
Sbjct: 286  --STSFDEPRVDCCDGQGNSLQYQSSNVVVRARWLYEPDETDRITASHFRKIFLCSCGRL 343

Query: 1066 ETSSGRNHVVLSICGESFMLHQIRKMVGTAVAVKRGLLPRDVIELSLAKFSRIVLPLAPS 1245
            E S G +++ +SI GESFMLHQIRKMVGTAVAVKR L PRD++ LSLAKFSRIVLPLAPS
Sbjct: 344  ENSMGFDYIEISIWGESFMLHQIRKMVGTAVAVKRNLFPRDILTLSLAKFSRIVLPLAPS 403

Query: 1246 EVLILRSNHYTSSNRPGNTTRPEVQLMAESQEI 1344
            EVLILR N +     P N TRPE+  M ES+EI
Sbjct: 404  EVLILRGNTFILRKMPSNITRPEMLTMVESEEI 436


>gb|EMJ08575.1| hypothetical protein PRUPE_ppa004352mg [Prunus persica]
          Length = 515

 Score =  445 bits (1145), Expect = e-122
 Identities = 234/395 (59%), Positives = 282/395 (71%), Gaps = 6/395 (1%)
 Frame = +1

Query: 178  KRWESFCKKKVVMRVGYIGTDYRGLQKQRDAHDLSTIEAELESAIYKAGGILDSNFGKLQ 357
            ++W+S  KKKVV+RVGY+G+DYRGLQ QRD H LSTIE ELE+AI+ AGGI DSN G L 
Sbjct: 54   EKWQSVRKKKVVLRVGYVGSDYRGLQMQRDEHSLSTIEKELETAIFNAGGIRDSNLGNLN 113

Query: 358  KIGWKRSSRTDKGVHSLATTISLKMEIPDLAWKDDPSGIVLANYVNSNLPNNVKVFSILP 537
            KI W RSSRTDKGVHSLAT IS KMEIP+ AW  DP GI L N++N  LP+N+KVFSILP
Sbjct: 114  KIAWARSSRTDKGVHSLATMISFKMEIPEKAWDGDPYGIALVNHINYYLPHNIKVFSILP 173

Query: 538  SQKSFDPRRECSLRMYSYLLPAEIIGIGGNCSSKEVTKHLEEFNSILKGFEGERPFHNYT 717
            +Q+SFDPR+EC+LRMYSYLLPA++IGI  + SS E+  H+ +FNSIL  FEGE PFHNYT
Sbjct: 174  AQRSFDPRKECNLRMYSYLLPADVIGIKSHFSSAEIDYHISDFNSILNCFEGEHPFHNYT 233

Query: 718  VRSKYRKPPSGKRNSMKQS-----RLKLDTLPSGVEESSGDVGNFHVEDATQSEYEERAI 882
            +RSKYR+    K++    S     R   +   S  EES  D  NF   +  +S+ E    
Sbjct: 234  IRSKYRRKLPVKKSRRHGSVSITGRSTGEASASESEESDVD-ENFDGTNTPESDAEVLNQ 292

Query: 883  LSCNTXXXXXXXXXXXXKRNENKN-SNLPPPVRARWLHEPDERDRLNASHFRKIFRCSCG 1059
             S  +            K+ +  N  +    +RARWL+EPDERDR++ASHFRKIF CSCG
Sbjct: 293  NSSPSSNSEGNLRNACEKQGDGGNDQSAGSVIRARWLYEPDERDRISASHFRKIFLCSCG 352

Query: 1060 DLETSSGRNHVVLSICGESFMLHQIRKMVGTAVAVKRGLLPRDVIELSLAKFSRIVLPLA 1239
             LE S G ++V LSI GESFMLHQIRKMVGTAVA+KR LLPRD++ LSLA FSRI+LPLA
Sbjct: 353  KLEKSLGHDYVELSISGESFMLHQIRKMVGTAVAIKRKLLPRDILTLSLAMFSRIILPLA 412

Query: 1240 PSEVLILRSNHYTSSNRPGNTTRPEVQLMAESQEI 1344
            PSEVL LR N ++   RPGN TRPE+  M ES EI
Sbjct: 413  PSEVLFLRGNRFSIRGRPGNVTRPEMMAMVESGEI 447


>ref|XP_004296032.1| PREDICTED: putative tRNA pseudouridine synthase-like [Fragaria vesca
            subsp. vesca]
          Length = 509

 Score =  444 bits (1141), Expect = e-122
 Identities = 233/394 (59%), Positives = 285/394 (72%), Gaps = 5/394 (1%)
 Frame = +1

Query: 178  KRWESFCKKKVVMRVGYIGTDYRGLQKQRDAHDLSTIEAELESAIYKAGGILDSNFGKLQ 357
            +RWES  K+KVV+RVGY+GTDYRGLQ QRD   +STIE ELE+AI+KAGGI +SNFG L 
Sbjct: 52   ERWESVRKRKVVLRVGYVGTDYRGLQIQRDDPSISTIEKELETAIFKAGGIRESNFGNLN 111

Query: 358  KIGWKRSSRTDKGVHSLATTISLKMEIPDLAWKDDPSGIVLANYVNSNLPNNVKVFSILP 537
            KI W RSSRTDKGVHSLAT ISLKMEIP+ AW  DP GI L N++NS LP ++KVFS +P
Sbjct: 112  KISWARSSRTDKGVHSLATMISLKMEIPENAWDGDPYGIALVNHINSYLPRDIKVFSAVP 171

Query: 538  SQKSFDPRRECSLRMYSYLLPAEIIGIGGNCSSKEVTKHLEEFNSILKGFEGERPFHNYT 717
            +Q+SFDPR+EC+LRMYSYLLPA++IGI  + S+ E+  H+ +FN IL  FEGE PFHNYT
Sbjct: 172  AQRSFDPRKECNLRMYSYLLPADVIGIKSHFSAAEIEDHIADFNDILNAFEGEHPFHNYT 231

Query: 718  VRSKYRKPPSGKRNSMKQSRLKLDTLPSGVEESSGDVGNFHVEDATQS-EYEERAILSCN 894
            +RSKYR    GK++ + ++  K  T  S VE SS ++     ED  +     E  +L+ N
Sbjct: 232  IRSKYRMKLPGKKSPIYRNMSK--TERSTVEASSSELEGSDDEDKFKGRNSSETEVLNQN 289

Query: 895  T--XXXXXXXXXXXXKRNEN--KNSNLPPPVRARWLHEPDERDRLNASHFRKIFRCSCGD 1062
            +              K+ E+  K  +    V A+WL+EPDE DR+ ASHFRKIFRCSCG 
Sbjct: 290  SSMSSNGNEILLHACKKQEDVLKEKSTDSVVYAKWLYEPDESDRIGASHFRKIFRCSCGK 349

Query: 1063 LETSSGRNHVVLSICGESFMLHQIRKMVGTAVAVKRGLLPRDVIELSLAKFSRIVLPLAP 1242
            LE S    +V LSI GESFMLHQIRKMVGTAVAVKR LLPRD++ LSLAKFSRI+LPLAP
Sbjct: 350  LEKSLTHEYVELSIWGESFMLHQIRKMVGTAVAVKRKLLPRDILTLSLAKFSRIILPLAP 409

Query: 1243 SEVLILRSNHYTSSNRPGNTTRPEVQLMAESQEI 1344
            SEVLILR N ++   RPGN  RPE+  M ES+E+
Sbjct: 410  SEVLILRGNRFSIRERPGNVKRPEMIAMVESEEV 443


>ref|XP_006410132.1| hypothetical protein EUTSA_v10016529mg [Eutrema salsugineum]
            gi|557111301|gb|ESQ51585.1| hypothetical protein
            EUTSA_v10016529mg [Eutrema salsugineum]
          Length = 512

 Score =  443 bits (1140), Expect = e-122
 Identities = 232/394 (58%), Positives = 276/394 (70%), Gaps = 5/394 (1%)
 Frame = +1

Query: 181  RWESFCKKKVVMRVGYIGTDYRGLQKQRDAHDLSTIEAELESAIYKAGGILDSNFGKLQK 360
            +WES+ KKKVV+R+GY+GTDYRGLQ QRD   L TIE ELE AIYKAGGILDSNFG L K
Sbjct: 58   KWESYRKKKVVIRIGYVGTDYRGLQIQRDDPALKTIEGELEVAIYKAGGILDSNFGDLHK 117

Query: 361  IGWKRSSRTDKGVHSLATTISLKMEIPDLAWKDDPSGIVLANYVNSNLPNNVKVFSILPS 540
            IGW RSSRTDKGVHSLATTISLKMEIPD AWKDDP G VLA  ++ +LP N++VFS+LPS
Sbjct: 118  IGWARSSRTDKGVHSLATTISLKMEIPDTAWKDDPQGTVLAKCISKHLPENIRVFSVLPS 177

Query: 541  QKSFDPRRECSLRMYSYLLPAEIIGIGGNCSSKEVTKHLEEFNSILKGFEGERPFHNYTV 720
            Q+ FDPRREC+LRMYSYLLP  +IG+  + +S E+  H+ +FN ILK FEG+ PFHNYT 
Sbjct: 178  QRRFDPRRECTLRMYSYLLPVGVIGVKNSFTSDEIDDHISDFNEILKEFEGDYPFHNYTQ 237

Query: 721  RSKYRKPPSGK---RNSMKQSRLKLDTLPSGVEESSGDVGNFHVEDATQSEYEERAILSC 891
            RSKYRK    K   RN     + K                     +A+ SEY E    +C
Sbjct: 238  RSKYRKKAKQKLTQRNGRPPKKPKF--------------------EASVSEYTEE---NC 274

Query: 892  NTXXXXXXXXXXXXKRNEN--KNSNLPPPVRARWLHEPDERDRLNASHFRKIFRCSCGDL 1065
                          + NE   ++ N    +RA+WLHEPDE D+L+A+HFRK+FRC CG L
Sbjct: 275  RGNEEEVEGEEADGESNEEVPESDNTQAYIRAKWLHEPDETDKLSAAHFRKVFRCRCGKL 334

Query: 1066 ETSSGRNHVVLSICGESFMLHQIRKMVGTAVAVKRGLLPRDVIELSLAKFSRIVLPLAPS 1245
            ETS G   V +SI GESFMLHQIRKM+GTAVAVKR LLPRD+I LSL KF+RIVLPLAPS
Sbjct: 335  ETSLGFCFVEISIWGESFMLHQIRKMIGTAVAVKRELLPRDIIRLSLNKFTRIVLPLAPS 394

Query: 1246 EVLILRSNHYTSSNRPGNTTRPEVQLMAESQEIQ 1347
            EVLILR N +     PG   RPEV+ M+ES+E++
Sbjct: 395  EVLILRGNSFEVLKSPGKFKRPEVKAMSESEEVE 428


>ref|XP_002319961.2| hypothetical protein POPTR_0013s15030g [Populus trichocarpa]
            gi|550325882|gb|EEE95884.2| hypothetical protein
            POPTR_0013s15030g [Populus trichocarpa]
          Length = 505

 Score =  443 bits (1140), Expect = e-122
 Identities = 237/392 (60%), Positives = 285/392 (72%), Gaps = 1/392 (0%)
 Frame = +1

Query: 181  RWESFCKKKVVMRVGYIGTDYRGLQKQRDAHDLSTIEAELESAIYKAGGILDSNFGKLQK 360
            +WES  KKKV +RVGY+GTDYRGLQKQ D H L TIE ELE AIY+AGGI +SN+G L K
Sbjct: 69   KWESIRKKKVALRVGYVGTDYRGLQKQHDQHSLLTIEGELERAIYEAGGIRESNYGNLNK 128

Query: 361  IGWKRSSRTDKGVHSLATTISLKMEIPDLAWKDDPSGIVLANYVNSNLPNNVKVFSILPS 540
            I W RSSRTDKGVHSLATTI++KMEIP+ AWKDD  G+VLA +VNS LP++++V SILP+
Sbjct: 129  ISWARSSRTDKGVHSLATTITMKMEIPENAWKDDLYGMVLAKHVNSYLPDSIRVLSILPA 188

Query: 541  QKSFDPRRECSLRMYSYLLPAEIIGIGGNCSSKEVTKHLEEFNSILKGFEGERPFHNYTV 720
            QKSFDPRREC +R YSYLLPAE+IGI  + S  E+  H+ +FN+IL  FEG+ PFHNYTV
Sbjct: 189  QKSFDPRRECDIRKYSYLLPAEVIGIKSHFSMAEIDDHISDFNNILNAFEGDHPFHNYTV 248

Query: 721  RSKY-RKPPSGKRNSMKQSRLKLDTLPSGVEESSGDVGNFHVEDATQSEYEERAILSCNT 897
            RSKY RK P+   +  K++R    T  SG EE+       HVE +  S   E +I   N 
Sbjct: 249  RSKYRRKYPTKNGHVSKRARSSWGTSASGSEEN-------HVELSQNS--LESSICDLNG 299

Query: 898  XXXXXXXXXXXXKRNENKNSNLPPPVRARWLHEPDERDRLNASHFRKIFRCSCGDLETSS 1077
                           ++++SNL  P+RARWLHEPDE DR+ A+HFRKIFRCSCG LE S 
Sbjct: 300  DIL------------KDQSSNL--PLRARWLHEPDETDRIGAAHFRKIFRCSCGKLEKSL 345

Query: 1078 GRNHVVLSICGESFMLHQIRKMVGTAVAVKRGLLPRDVIELSLAKFSRIVLPLAPSEVLI 1257
            G + V +SI GESFMLHQIRKMVGTAVAVKR +LPRD+I LSL KFSRIVLPLAPSEVLI
Sbjct: 346  GFDFVEISIWGESFMLHQIRKMVGTAVAVKRKVLPRDLIMLSLTKFSRIVLPLAPSEVLI 405

Query: 1258 LRSNHYTSSNRPGNTTRPEVQLMAESQEIQAA 1353
            LR N ++   + G   RPE++ M ES+EI  A
Sbjct: 406  LRGNDFSLRKKSGEGKRPEMETMVESEEILRA 437


>gb|ESW14066.1| hypothetical protein PHAVU_008G250200g [Phaseolus vulgaris]
          Length = 512

 Score =  441 bits (1135), Expect = e-121
 Identities = 233/394 (59%), Positives = 277/394 (70%), Gaps = 3/394 (0%)
 Frame = +1

Query: 181  RWESFCKKKVVMRVGYIGTDYRGLQKQRDAHDLSTIEAELESAIYKAGGILDSNFGKLQK 360
            +WE F KKKVVMRVGY+GTD+RGLQ QRD H LSTIE ELE+AI+ AGG+ DSNFG L K
Sbjct: 63   KWEPFLKKKVVMRVGYVGTDFRGLQIQRDEHTLSTIEKELETAIFTAGGMRDSNFGDLNK 122

Query: 361  IGWKRSSRTDKGVHSLATTISLKMEIPDLAWKDDPSGIVLANYVNSNLPNNVKVFSILPS 540
            + W RSSRTDKGVHSLAT IS KMEIP+ AWK D  GI LAN +NS LP  ++VFSILPS
Sbjct: 123  VKWGRSSRTDKGVHSLATVISFKMEIPENAWKGDDYGIALANRINSYLPYTIRVFSILPS 182

Query: 541  QKSFDPRRECSLRMYSYLLPAEIIGIGGNCSSKEVTKHLEEFNSILKGFEGERPFHNYTV 720
             K FDPRREC+LR YSYLLPA+IIGI  + S  E+  H+ EFNSIL  FEGE PFHNYTV
Sbjct: 183  TKRFDPRRECNLRKYSYLLPADIIGIQSHFSKDEIDFHISEFNSILNVFEGEHPFHNYTV 242

Query: 721  RSKYRKPPSGKRNS---MKQSRLKLDTLPSGVEESSGDVGNFHVEDATQSEYEERAILSC 891
            RSKYRK    +++S   +   RL   +L SG E  S D  ++   D + +   ++     
Sbjct: 243  RSKYRKKYQVRQSSGSDVMSDRLGSSSLASGFESESDDSDDYDFVDGSPTTLSDK----- 297

Query: 892  NTXXXXXXXXXXXXKRNENKNSNLPPPVRARWLHEPDERDRLNASHFRKIFRCSCGDLET 1071
                          + N   + N    VRARWLHEPDE+DRLNASHFR +FRCSCG LET
Sbjct: 298  ----EESHKPPESSESNGLSSQNSNVVVRARWLHEPDEKDRLNASHFRNVFRCSCGKLET 353

Query: 1072 SSGRNHVVLSICGESFMLHQIRKMVGTAVAVKRGLLPRDVIELSLAKFSRIVLPLAPSEV 1251
            S G ++V + I G+SFMLHQIRKMVGTAVAVKR L+P+DVI +SL KFSRIVLPLAP EV
Sbjct: 354  SMGYDYVEIHIWGDSFMLHQIRKMVGTAVAVKRKLIPKDVISVSLNKFSRIVLPLAPPEV 413

Query: 1252 LILRSNHYTSSNRPGNTTRPEVQLMAESQEIQAA 1353
            LILR N +   ++ GN TR E+  M ES++I  A
Sbjct: 414  LILRGNAFKMRSKAGNFTRQEMVSMVESEQILKA 447